2024-07-12 16:43:28,272 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 16:43:28,576 Running on GPU
2024-07-12 16:43:39,319 Found 6 citations for tools or databases
2024-07-12 16:43:39,319 Query 1/1: RGS2_ABRAL (length 292)
2024-07-12 16:43:39,780 Sleeping for 9s. Reason: PENDING
2024-07-12 16:43:49,209 Sleeping for 5s. Reason: RUNNING
2024-07-12 16:43:54,653 Sleeping for 8s. Reason: RUNNING
2024-07-12 16:44:04,698 Sleeping for 8s. Reason: PENDING
2024-07-12 16:44:13,116 Sleeping for 6s. Reason: RUNNING
2024-07-12 16:44:20,988 Setting max_seq=508, max_extra_seq=2048
2024-07-12 16:47:22,488 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=74.4 pTM=0.69 ipTM=0.673
2024-07-12 16:47:25,320 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=69.9 pTM=0.558 ipTM=0.225 tol=3.13
2024-07-12 16:47:28,146 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=71.2 pTM=0.597 ipTM=0.328 tol=1.73
2024-07-12 16:47:30,975 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=69.2 pTM=0.557 ipTM=0.213 tol=0.675
2024-07-12 16:47:33,804 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=71.2 pTM=0.587 ipTM=0.321 tol=0.874
2024-07-12 16:47:36,639 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=70.6 pTM=0.563 ipTM=0.246 tol=1.01
2024-07-12 16:47:39,470 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=71.2 pTM=0.583 ipTM=0.313 tol=0.707
2024-07-12 16:47:42,299 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=70.9 pTM=0.567 ipTM=0.246 tol=1.51
2024-07-12 16:47:45,124 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=71.2 pTM=0.577 ipTM=0.267 tol=0.878
2024-07-12 16:47:47,954 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=70.4 pTM=0.565 ipTM=0.234 tol=0.6
2024-07-12 16:47:50,779 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=70.6 pTM=0.58 ipTM=0.289 tol=0.539
2024-07-12 16:47:53,610 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=71.3 pTM=0.576 ipTM=0.267 tol=0.709
2024-07-12 16:47:56,437 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=71.8 pTM=0.596 ipTM=0.332 tol=0.699
2024-07-12 16:47:59,265 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=70.4 pTM=0.57 ipTM=0.242 tol=1.18
2024-07-12 16:48:02,095 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=71.8 pTM=0.598 ipTM=0.336 tol=1.24
2024-07-12 16:48:04,929 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=70.9 pTM=0.571 ipTM=0.253 tol=0.938
2024-07-12 16:48:07,755 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=71.7 pTM=0.601 ipTM=0.343 tol=0.92
2024-07-12 16:48:10,586 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=70.6 pTM=0.574 ipTM=0.251 tol=0.872
2024-07-12 16:48:13,415 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=72.1 pTM=0.6 ipTM=0.337 tol=1.07
2024-07-12 16:48:16,249 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=71.1 pTM=0.571 ipTM=0.249 tol=1.58
2024-07-12 16:48:19,078 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=71.6 pTM=0.588 ipTM=0.3 tol=0.864
2024-07-12 16:48:21,911 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=70.6 pTM=0.573 ipTM=0.244 tol=0.637
2024-07-12 16:48:24,737 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=71.1 pTM=0.588 ipTM=0.294 tol=0.796
2024-07-12 16:48:27,570 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=70.5 pTM=0.569 ipTM=0.232 tol=0.849
2024-07-12 16:48:30,401 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=71.8 pTM=0.585 ipTM=0.282 tol=0.92
2024-07-12 16:48:33,230 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=70.2 pTM=0.563 ipTM=0.225 tol=0.614
2024-07-12 16:48:36,061 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=71.4 pTM=0.584 ipTM=0.287 tol=0.562
2024-07-12 16:48:38,895 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=70.5 pTM=0.568 ipTM=0.239 tol=0.63
2024-07-12 16:48:41,729 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=72 pTM=0.594 ipTM=0.313 tol=0.558
2024-07-12 16:48:44,566 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=71.4 pTM=0.575 ipTM=0.254 tol=0.911
2024-07-12 16:48:47,412 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=72.4 pTM=0.596 ipTM=0.323 tol=0.99
2024-07-12 16:48:47,412 alphafold2_multimer_v3_model_1_seed_000 took 213.0s (30 recycles)
2024-07-12 16:48:50,316 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=72.4 pTM=0.602 ipTM=0.325
2024-07-12 16:48:53,146 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=75.4 pTM=0.64 ipTM=0.417 tol=2.88
2024-07-12 16:48:55,974 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=73.1 pTM=0.583 ipTM=0.232 tol=0.852
2024-07-12 16:48:58,800 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=73.2 pTM=0.586 ipTM=0.254 tol=1.5
2024-07-12 16:49:01,623 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=73.3 pTM=0.566 ipTM=0.199 tol=0.71
2024-07-12 16:49:04,447 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=73.1 pTM=0.572 ipTM=0.22 tol=0.796
2024-07-12 16:49:07,273 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=73.2 pTM=0.565 ipTM=0.195 tol=0.796
2024-07-12 16:49:10,097 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=72.5 pTM=0.557 ipTM=0.185 tol=2.06
2024-07-12 16:49:12,921 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=72.9 pTM=0.559 ipTM=0.189 tol=1.31
2024-07-12 16:49:15,744 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=73 pTM=0.566 ipTM=0.213 tol=0.6
2024-07-12 16:49:18,574 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=73.3 pTM=0.566 ipTM=0.208 tol=0.836
2024-07-12 16:49:21,403 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=73.4 pTM=0.565 ipTM=0.196 tol=0.96
2024-07-12 16:49:24,233 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=73.4 pTM=0.567 ipTM=0.205 tol=0.806
2024-07-12 16:49:27,062 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=73.5 pTM=0.571 ipTM=0.206 tol=0.791
2024-07-12 16:49:29,891 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=73.4 pTM=0.57 ipTM=0.224 tol=1.08
2024-07-12 16:49:32,721 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=73.9 pTM=0.573 ipTM=0.219 tol=0.998
2024-07-12 16:49:35,547 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=73.4 pTM=0.58 ipTM=0.235 tol=0.616
2024-07-12 16:49:38,376 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=73.6 pTM=0.574 ipTM=0.211 tol=1.85
2024-07-12 16:49:41,203 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=73.2 pTM=0.571 ipTM=0.217 tol=1.62
2024-07-12 16:49:44,031 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=73.7 pTM=0.573 ipTM=0.215 tol=0.643
2024-07-12 16:49:46,860 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=73.2 pTM=0.564 ipTM=0.194 tol=1.13
2024-07-12 16:49:49,687 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=73.4 pTM=0.569 ipTM=0.207 tol=1.04
2024-07-12 16:49:52,515 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=73.2 pTM=0.567 ipTM=0.198 tol=0.669
2024-07-12 16:49:55,341 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=73.2 pTM=0.568 ipTM=0.206 tol=0.472
2024-07-12 16:49:55,342 alphafold2_multimer_v3_model_2_seed_000 took 67.9s (23 recycles)
2024-07-12 16:49:58,238 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=70.1 pTM=0.579 ipTM=0.248
2024-07-12 16:50:01,053 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=71 pTM=0.584 ipTM=0.265 tol=1.8
2024-07-12 16:50:03,855 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=69.6 pTM=0.561 ipTM=0.229 tol=0.534
2024-07-12 16:50:06,662 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=71.5 pTM=0.614 ipTM=0.425 tol=0.631
2024-07-12 16:50:09,468 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=70.1 pTM=0.565 ipTM=0.284 tol=0.581
2024-07-12 16:50:12,274 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=72.6 pTM=0.646 ipTM=0.542 tol=0.434
2024-07-12 16:50:12,274 alphafold2_multimer_v3_model_3_seed_000 took 16.9s (5 recycles)
2024-07-12 16:50:15,174 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=75.9 pTM=0.72 ipTM=0.691
2024-07-12 16:50:18,000 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=73.7 pTM=0.599 ipTM=0.213 tol=4.27
2024-07-12 16:50:20,821 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=73.1 pTM=0.595 ipTM=0.191 tol=2.09
2024-07-12 16:50:23,642 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=72.5 pTM=0.585 ipTM=0.177 tol=1.52
2024-07-12 16:50:26,465 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=72.6 pTM=0.586 ipTM=0.169 tol=1.41
2024-07-12 16:50:29,289 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=72.9 pTM=0.589 ipTM=0.17 tol=0.745
2024-07-12 16:50:32,108 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=72.6 pTM=0.584 ipTM=0.167 tol=1.23
2024-07-12 16:50:34,927 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=72 pTM=0.576 ipTM=0.158 tol=1.28
2024-07-12 16:50:37,745 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=72.5 pTM=0.57 ipTM=0.15 tol=1.35
2024-07-12 16:50:40,567 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=72.9 pTM=0.583 ipTM=0.16 tol=1.22
2024-07-12 16:50:43,387 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=72.4 pTM=0.57 ipTM=0.148 tol=0.679
2024-07-12 16:50:46,207 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=72.5 pTM=0.568 ipTM=0.148 tol=0.601
2024-07-12 16:50:49,028 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=72.6 pTM=0.57 ipTM=0.156 tol=1.49
2024-07-12 16:50:51,849 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=72.8 pTM=0.572 ipTM=0.156 tol=1.86
2024-07-12 16:50:54,671 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=72.9 pTM=0.574 ipTM=0.158 tol=1.74
2024-07-12 16:50:57,496 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=73 pTM=0.569 ipTM=0.146 tol=1.78
2024-07-12 16:51:00,318 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=73 pTM=0.579 ipTM=0.17 tol=1.6
2024-07-12 16:51:03,139 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=72.9 pTM=0.572 ipTM=0.148 tol=1.23
2024-07-12 16:51:05,958 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=72.7 pTM=0.57 ipTM=0.167 tol=1.44
2024-07-12 16:51:08,780 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=72.5 pTM=0.568 ipTM=0.147 tol=1.5
2024-07-12 16:51:11,600 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=72.1 pTM=0.563 ipTM=0.149 tol=1.5
2024-07-12 16:51:14,422 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=72.7 pTM=0.572 ipTM=0.147 tol=0.936
2024-07-12 16:51:17,244 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=72.8 pTM=0.579 ipTM=0.162 tol=1.28
2024-07-12 16:51:20,066 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=71.8 pTM=0.571 ipTM=0.16 tol=1.02
2024-07-12 16:51:22,889 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=71.9 pTM=0.567 ipTM=0.154 tol=0.398
2024-07-12 16:51:22,889 alphafold2_multimer_v3_model_4_seed_000 took 70.5s (24 recycles)
2024-07-12 16:51:25,788 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=70.4 pTM=0.588 ipTM=0.27
2024-07-12 16:51:28,613 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=68.6 pTM=0.574 ipTM=0.234 tol=1.7
2024-07-12 16:51:31,427 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=69.1 pTM=0.563 ipTM=0.232 tol=1.36
2024-07-12 16:51:34,249 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=68.6 pTM=0.552 ipTM=0.181 tol=1.22
2024-07-12 16:51:37,062 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=69.1 pTM=0.565 ipTM=0.248 tol=0.822
2024-07-12 16:51:39,882 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=68.8 pTM=0.545 ipTM=0.167 tol=1.13
2024-07-12 16:51:42,692 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=69.1 pTM=0.571 ipTM=0.276 tol=1.36
2024-07-12 16:51:45,511 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=68.6 pTM=0.537 ipTM=0.157 tol=1.62
2024-07-12 16:51:48,320 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=68.1 pTM=0.541 ipTM=0.202 tol=1.29
2024-07-12 16:51:51,139 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=68.5 pTM=0.533 ipTM=0.152 tol=1.12
2024-07-12 16:51:53,946 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=68.7 pTM=0.549 ipTM=0.238 tol=1.46
2024-07-12 16:51:56,767 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=68.3 pTM=0.534 ipTM=0.167 tol=1.1
2024-07-12 16:51:59,577 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=69.7 pTM=0.573 ipTM=0.301 tol=1.22
2024-07-12 16:52:02,397 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=68.3 pTM=0.546 ipTM=0.212 tol=0.81
2024-07-12 16:52:05,208 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=70.8 pTM=0.608 ipTM=0.428 tol=0.632
2024-07-12 16:52:08,028 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=68.9 pTM=0.549 ipTM=0.23 tol=0.601
2024-07-12 16:52:10,839 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=70.8 pTM=0.618 ipTM=0.454 tol=0.734
2024-07-12 16:52:13,658 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=68.7 pTM=0.555 ipTM=0.247 tol=0.69
2024-07-12 16:52:16,470 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=70.4 pTM=0.607 ipTM=0.44 tol=0.848
2024-07-12 16:52:19,292 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=68.5 pTM=0.551 ipTM=0.232 tol=1.04
2024-07-12 16:52:22,101 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=69.4 pTM=0.586 ipTM=0.367 tol=1.08
2024-07-12 16:52:24,920 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=68.4 pTM=0.538 ipTM=0.187 tol=1.2
2024-07-12 16:52:27,731 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=69.8 pTM=0.59 ipTM=0.373 tol=1.03
2024-07-12 16:52:30,552 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=68.5 pTM=0.544 ipTM=0.209 tol=0.807
2024-07-12 16:52:33,362 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=69.8 pTM=0.587 ipTM=0.361 tol=0.969
2024-07-12 16:52:36,182 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=68.4 pTM=0.546 ipTM=0.217 tol=0.741
2024-07-12 16:52:38,993 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=70 pTM=0.589 ipTM=0.368 tol=0.915
2024-07-12 16:52:41,815 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=68.9 pTM=0.552 ipTM=0.222 tol=1.08
2024-07-12 16:52:44,624 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=69.6 pTM=0.578 ipTM=0.319 tol=1.05
2024-07-12 16:52:47,444 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=68.6 pTM=0.544 ipTM=0.199 tol=0.906
2024-07-12 16:52:50,255 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=69.3 pTM=0.565 ipTM=0.287 tol=0.933
2024-07-12 16:52:50,255 alphafold2_multimer_v3_model_5_seed_000 took 87.3s (30 recycles)
2024-07-12 16:52:50,325 reranking models by 'multimer' metric
2024-07-12 16:53:10,176 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 16:53:28,888 Relaxation took 38.6s
2024-07-12 16:53:28,888 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=72.6 pTM=0.646 ipTM=0.542
2024-07-12 16:53:34,817 Relaxation took 5.9s
2024-07-12 16:53:34,817 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=72.4 pTM=0.596 ipTM=0.323
2024-07-12 16:53:40,722 Relaxation took 5.9s
2024-07-12 16:53:40,722 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=69.3 pTM=0.565 ipTM=0.287
2024-07-12 16:53:49,623 Relaxation took 8.9s
2024-07-12 16:53:49,623 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=73.2 pTM=0.568 ipTM=0.206
2024-07-12 16:53:55,152 Relaxation took 5.5s
2024-07-12 16:53:55,153 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=71.9 pTM=0.567 ipTM=0.154
2024-07-12 16:53:56,003 Done