2024-07-12 17:06:34,019 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 17:06:34,333 Running on GPU
2024-07-12 17:06:50,258 Found 6 citations for tools or databases
2024-07-12 17:06:50,258 Query 1/1: RHNO1_SMG5 (length 1254)
2024-07-12 17:06:52,586 Sleeping for 6s. Reason: PENDING
2024-07-12 17:06:59,009 Sleeping for 6s. Reason: RUNNING
2024-07-12 17:07:05,438 Sleeping for 5s. Reason: RUNNING
2024-07-12 17:07:10,863 Sleeping for 5s. Reason: RUNNING
2024-07-12 17:07:16,283 Sleeping for 7s. Reason: RUNNING
2024-07-12 17:07:23,720 Sleeping for 9s. Reason: RUNNING
2024-07-12 17:07:33,156 Sleeping for 8s. Reason: RUNNING
2024-07-12 17:07:41,582 Sleeping for 5s. Reason: RUNNING
2024-07-12 17:07:47,001 Sleeping for 5s. Reason: RUNNING
2024-07-12 17:07:53,783 Sleeping for 8s. Reason: PENDING
2024-07-12 17:08:02,214 Sleeping for 6s. Reason: RUNNING
2024-07-12 17:08:08,644 Sleeping for 9s. Reason: RUNNING
2024-07-12 17:08:18,077 Sleeping for 5s. Reason: RUNNING
2024-07-12 17:08:27,062 Setting max_seq=508, max_extra_seq=2048
2024-07-12 17:12:23,306 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=55.8 pTM=0.551 ipTM=0.366
2024-07-12 17:13:02,513 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=56.3 pTM=0.549 ipTM=0.231 tol=8.41
2024-07-12 17:13:41,924 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=56.8 pTM=0.546 ipTM=0.209 tol=5.56
2024-07-12 17:14:21,351 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=56.6 pTM=0.542 ipTM=0.236 tol=2.45
2024-07-12 17:15:00,892 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=57.6 pTM=0.547 ipTM=0.229 tol=2.69
2024-07-12 17:15:40,443 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=57.7 pTM=0.547 ipTM=0.225 tol=2.17
2024-07-12 17:16:20,027 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=58.1 pTM=0.551 ipTM=0.219 tol=1.59
2024-07-12 17:16:59,623 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=57.4 pTM=0.544 ipTM=0.213 tol=3.32
2024-07-12 17:17:39,407 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=57.6 pTM=0.544 ipTM=0.219 tol=2.8
2024-07-12 17:18:19,053 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=58 pTM=0.548 ipTM=0.206 tol=2.97
2024-07-12 17:18:58,689 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=57.5 pTM=0.546 ipTM=0.202 tol=3.79
2024-07-12 17:19:38,449 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=57.5 pTM=0.544 ipTM=0.213 tol=3.51
2024-07-12 17:20:18,104 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=57.3 pTM=0.543 ipTM=0.21 tol=4.72
2024-07-12 17:20:57,709 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=57.4 pTM=0.542 ipTM=0.207 tol=2.85
2024-07-12 17:21:37,283 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=57.4 pTM=0.546 ipTM=0.211 tol=3.24
2024-07-12 17:22:16,860 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=57.8 pTM=0.545 ipTM=0.222 tol=3.13
2024-07-12 17:22:56,468 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=57.6 pTM=0.544 ipTM=0.202 tol=2.78
2024-07-12 17:23:36,031 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=57.8 pTM=0.54 ipTM=0.19 tol=1.91
2024-07-12 17:24:15,659 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=57.5 pTM=0.544 ipTM=0.207 tol=3.77
2024-07-12 17:24:55,393 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=57.8 pTM=0.545 ipTM=0.203 tol=3.25
2024-07-12 17:25:35,048 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=57.6 pTM=0.542 ipTM=0.206 tol=1.63
2024-07-12 17:26:14,681 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=57.7 pTM=0.543 ipTM=0.2 tol=2.49
2024-07-12 17:26:54,269 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=57.3 pTM=0.544 ipTM=0.213 tol=2.39
2024-07-12 17:27:33,929 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=57.5 pTM=0.54 ipTM=0.2 tol=2.51
2024-07-12 17:28:13,450 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=57.5 pTM=0.542 ipTM=0.204 tol=1.71
2024-07-12 17:28:53,085 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=57.6 pTM=0.542 ipTM=0.198 tol=3.9
2024-07-12 17:29:32,654 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=57.6 pTM=0.543 ipTM=0.22 tol=2.69
2024-07-12 17:30:12,214 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=57.6 pTM=0.542 ipTM=0.19 tol=2.44
2024-07-12 17:30:51,766 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=57.5 pTM=0.542 ipTM=0.214 tol=3.19
2024-07-12 17:31:31,331 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=57.4 pTM=0.541 ipTM=0.19 tol=3.78
2024-07-12 17:32:10,892 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=57.6 pTM=0.541 ipTM=0.193 tol=3.93
2024-07-12 17:32:10,893 alphafold2_multimer_v3_model_1_seed_000 took 1371.3s (30 recycles)
2024-07-12 17:32:51,540 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=55 pTM=0.537 ipTM=0.258
2024-07-12 17:33:31,273 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=57.9 pTM=0.562 ipTM=0.202 tol=12.3
2024-07-12 17:34:11,017 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=58.2 pTM=0.555 ipTM=0.177 tol=7.95
2024-07-12 17:34:50,756 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=58.6 pTM=0.551 ipTM=0.174 tol=3.74
2024-07-12 17:35:30,481 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=59 pTM=0.549 ipTM=0.167 tol=3.81
2024-07-12 17:36:10,213 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=59.5 pTM=0.549 ipTM=0.162 tol=2.58
2024-07-12 17:36:49,954 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=59.7 pTM=0.55 ipTM=0.163 tol=2.56
2024-07-12 17:37:29,676 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=59.3 pTM=0.548 ipTM=0.165 tol=2.69
2024-07-12 17:38:09,410 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=59.7 pTM=0.551 ipTM=0.17 tol=3.09
2024-07-12 17:38:49,070 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=59.7 pTM=0.551 ipTM=0.171 tol=3.07
2024-07-12 17:39:28,713 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=59.7 pTM=0.55 ipTM=0.167 tol=2.29
2024-07-12 17:40:08,455 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=59.7 pTM=0.551 ipTM=0.17 tol=1.8
2024-07-12 17:40:48,108 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=59.7 pTM=0.552 ipTM=0.171 tol=2.46
2024-07-12 17:41:27,766 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=59.7 pTM=0.55 ipTM=0.176 tol=2.13
2024-07-12 17:42:07,539 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=59.9 pTM=0.554 ipTM=0.172 tol=4.31
2024-07-12 17:42:47,223 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=60 pTM=0.551 ipTM=0.173 tol=4.79
2024-07-12 17:43:26,917 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=59.8 pTM=0.55 ipTM=0.172 tol=5.11
2024-07-12 17:44:06,628 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=59.8 pTM=0.55 ipTM=0.174 tol=2.24
2024-07-12 17:44:46,340 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=59.9 pTM=0.554 ipTM=0.173 tol=5.06
2024-07-12 17:45:26,040 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=59.8 pTM=0.553 ipTM=0.176 tol=4.95
2024-07-12 17:46:05,750 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=59.9 pTM=0.551 ipTM=0.175 tol=2.88
2024-07-12 17:46:45,564 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=59.8 pTM=0.551 ipTM=0.175 tol=2.14
2024-07-12 17:47:25,289 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=59.8 pTM=0.553 ipTM=0.172 tol=1.69
2024-07-12 17:48:05,007 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=59.8 pTM=0.55 ipTM=0.173 tol=2.03
2024-07-12 17:48:44,710 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=59.9 pTM=0.553 ipTM=0.173 tol=2.16
2024-07-12 17:49:24,408 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=59.6 pTM=0.55 ipTM=0.174 tol=1.56
2024-07-12 17:50:04,247 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=59.8 pTM=0.55 ipTM=0.172 tol=2.55
2024-07-12 17:50:44,064 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=59.5 pTM=0.549 ipTM=0.174 tol=2.01
2024-07-12 17:51:23,782 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=59.6 pTM=0.551 ipTM=0.172 tol=1.97
2024-07-12 17:52:03,491 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=59.4 pTM=0.55 ipTM=0.172 tol=3.07
2024-07-12 17:52:43,223 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=59.4 pTM=0.55 ipTM=0.17 tol=2.87
2024-07-12 17:52:43,224 alphafold2_multimer_v3_model_2_seed_000 took 1231.4s (30 recycles)
2024-07-12 17:53:23,903 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=57.4 pTM=0.543 ipTM=0.224
2024-07-12 17:54:03,642 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=57.3 pTM=0.549 ipTM=0.221 tol=10.3
2024-07-12 17:54:43,369 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=57.9 pTM=0.551 ipTM=0.197 tol=8.33
2024-07-12 17:55:23,075 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=58.1 pTM=0.547 ipTM=0.189 tol=7.06
2024-07-12 17:56:02,787 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=58.3 pTM=0.546 ipTM=0.178 tol=5.02
2024-07-12 17:56:42,606 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=58.3 pTM=0.542 ipTM=0.176 tol=5.44
2024-07-12 17:57:22,316 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=58.6 pTM=0.545 ipTM=0.175 tol=4.04
2024-07-12 17:58:01,997 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=58.3 pTM=0.541 ipTM=0.167 tol=6.75
2024-07-12 17:58:41,701 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=58.4 pTM=0.542 ipTM=0.171 tol=4.89
2024-07-12 17:59:21,411 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=58.5 pTM=0.542 ipTM=0.168 tol=4.09
2024-07-12 18:00:01,120 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=58.2 pTM=0.542 ipTM=0.172 tol=4.48
2024-07-12 18:00:40,976 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=58.4 pTM=0.541 ipTM=0.169 tol=4.51
2024-07-12 18:01:20,730 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=58.3 pTM=0.542 ipTM=0.181 tol=5.39
2024-07-12 18:02:00,516 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=58.2 pTM=0.541 ipTM=0.168 tol=6.66
2024-07-12 18:02:40,389 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=58.2 pTM=0.544 ipTM=0.187 tol=6.95
2024-07-12 18:03:20,151 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=58.4 pTM=0.544 ipTM=0.187 tol=3.94
2024-07-12 18:03:59,935 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=58.3 pTM=0.545 ipTM=0.196 tol=3.22
2024-07-12 18:04:39,688 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=58.2 pTM=0.543 ipTM=0.185 tol=3.12
2024-07-12 18:05:19,557 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=58.3 pTM=0.546 ipTM=0.201 tol=3.81
2024-07-12 18:05:59,390 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=58.2 pTM=0.542 ipTM=0.183 tol=3.18
2024-07-12 18:06:39,149 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=58.2 pTM=0.541 ipTM=0.188 tol=3.2
2024-07-12 18:07:18,887 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=58.2 pTM=0.541 ipTM=0.168 tol=6.75
2024-07-12 18:07:58,618 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=58.1 pTM=0.542 ipTM=0.188 tol=5.99
2024-07-12 18:08:38,394 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=58 pTM=0.54 ipTM=0.182 tol=4.41
2024-07-12 18:09:18,227 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=58.4 pTM=0.544 ipTM=0.193 tol=4.44
2024-07-12 18:09:57,969 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=58.1 pTM=0.542 ipTM=0.193 tol=2
2024-07-12 18:10:37,688 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=58.3 pTM=0.543 ipTM=0.2 tol=3.31
2024-07-12 18:11:17,381 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=58.2 pTM=0.544 ipTM=0.199 tol=3.78
2024-07-12 18:11:57,188 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=57.9 pTM=0.541 ipTM=0.191 tol=1.34
2024-07-12 18:12:36,895 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=58 pTM=0.542 ipTM=0.19 tol=2.35
2024-07-12 18:13:16,617 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=58 pTM=0.542 ipTM=0.192 tol=3
2024-07-12 18:13:16,618 alphafold2_multimer_v3_model_3_seed_000 took 1232.4s (30 recycles)
2024-07-12 18:13:57,660 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=55.3 pTM=0.523 ipTM=0.251
2024-07-12 18:14:37,444 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=57.1 pTM=0.549 ipTM=0.23 tol=16
2024-07-12 18:15:17,252 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=57.4 pTM=0.542 ipTM=0.21 tol=8.37
2024-07-12 18:15:57,025 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=56.3 pTM=0.541 ipTM=0.218 tol=11.4
2024-07-12 18:16:36,832 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=57.2 pTM=0.536 ipTM=0.203 tol=7.79
2024-07-12 18:17:16,619 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=56.9 pTM=0.537 ipTM=0.211 tol=3.94
2024-07-12 18:17:56,431 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=57 pTM=0.534 ipTM=0.201 tol=2.21
2024-07-12 18:18:36,212 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=56.8 pTM=0.538 ipTM=0.212 tol=2.22
2024-07-12 18:19:16,006 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=56.9 pTM=0.537 ipTM=0.208 tol=1.75
2024-07-12 18:19:55,931 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=57 pTM=0.537 ipTM=0.216 tol=1.59
2024-07-12 18:20:35,729 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=56.8 pTM=0.533 ipTM=0.201 tol=3.01
2024-07-12 18:21:15,497 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=56.7 pTM=0.534 ipTM=0.208 tol=3.38
2024-07-12 18:21:55,248 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=56.5 pTM=0.532 ipTM=0.211 tol=1.72
2024-07-12 18:22:35,021 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=56.8 pTM=0.534 ipTM=0.206 tol=2.33
2024-07-12 18:23:14,796 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=56.6 pTM=0.533 ipTM=0.209 tol=3.43
2024-07-12 18:23:54,552 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=56.8 pTM=0.537 ipTM=0.202 tol=1.48
2024-07-12 18:24:34,299 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=56.5 pTM=0.534 ipTM=0.201 tol=1.99
2024-07-12 18:25:14,046 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=56.8 pTM=0.538 ipTM=0.214 tol=3.18
2024-07-12 18:25:53,932 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=56.6 pTM=0.533 ipTM=0.208 tol=3.1
2024-07-12 18:26:33,678 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=56.9 pTM=0.537 ipTM=0.206 tol=3.17
2024-07-12 18:27:13,415 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=56.6 pTM=0.537 ipTM=0.211 tol=3.57
2024-07-12 18:27:53,198 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=57.1 pTM=0.535 ipTM=0.208 tol=3.94
2024-07-12 18:28:32,943 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=56.5 pTM=0.532 ipTM=0.199 tol=3.61
2024-07-12 18:29:12,693 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=56.7 pTM=0.53 ipTM=0.208 tol=1.87
2024-07-12 18:29:52,427 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=56.3 pTM=0.529 ipTM=0.195 tol=3.07
2024-07-12 18:30:32,104 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=56.2 pTM=0.527 ipTM=0.201 tol=2.21
2024-07-12 18:31:11,793 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=56.8 pTM=0.535 ipTM=0.212 tol=2.66
2024-07-12 18:31:51,570 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=56.5 pTM=0.53 ipTM=0.209 tol=1.68
2024-07-12 18:32:31,261 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=56.7 pTM=0.538 ipTM=0.211 tol=1.74
2024-07-12 18:33:10,930 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=56.4 pTM=0.534 ipTM=0.214 tol=1.4
2024-07-12 18:33:50,735 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=56.9 pTM=0.538 ipTM=0.208 tol=2.14
2024-07-12 18:33:50,736 alphafold2_multimer_v3_model_4_seed_000 took 1232.9s (30 recycles)
2024-07-12 18:34:31,446 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=56.8 pTM=0.543 ipTM=0.181
2024-07-12 18:35:11,215 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=57.5 pTM=0.548 ipTM=0.182 tol=10.3
2024-07-12 18:35:51,081 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=58 pTM=0.546 ipTM=0.185 tol=8.19
2024-07-12 18:36:30,853 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=58.2 pTM=0.544 ipTM=0.187 tol=4.41
2024-07-12 18:37:10,775 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=58.9 pTM=0.549 ipTM=0.193 tol=2.83
2024-07-12 18:37:50,550 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=58.6 pTM=0.547 ipTM=0.197 tol=2.15
2024-07-12 18:38:30,309 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=58.8 pTM=0.546 ipTM=0.189 tol=1.68
2024-07-12 18:39:10,049 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=58.3 pTM=0.546 ipTM=0.196 tol=2.66
2024-07-12 18:39:49,811 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=58.6 pTM=0.546 ipTM=0.19 tol=2.69
2024-07-12 18:40:29,564 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=58.2 pTM=0.543 ipTM=0.191 tol=2.92
2024-07-12 18:41:09,438 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=58.3 pTM=0.542 ipTM=0.191 tol=3.41
2024-07-12 18:41:49,197 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=58.2 pTM=0.542 ipTM=0.193 tol=1.88
2024-07-12 18:42:28,980 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=58.4 pTM=0.541 ipTM=0.192 tol=2.62
2024-07-12 18:43:08,749 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=58.2 pTM=0.54 ipTM=0.19 tol=2.49
2024-07-12 18:43:48,521 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=58.5 pTM=0.54 ipTM=0.19 tol=3.96
2024-07-12 18:44:28,368 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=58.2 pTM=0.538 ipTM=0.187 tol=3.87
2024-07-12 18:45:08,086 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=58.2 pTM=0.54 ipTM=0.187 tol=1.93
2024-07-12 18:45:47,810 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=58.4 pTM=0.539 ipTM=0.19 tol=3.8
2024-07-12 18:46:27,549 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=58.4 pTM=0.542 ipTM=0.192 tol=4.24
2024-07-12 18:47:07,408 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=58.5 pTM=0.54 ipTM=0.194 tol=2.81
2024-07-12 18:47:47,164 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=58.2 pTM=0.538 ipTM=0.191 tol=2.19
2024-07-12 18:48:26,929 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=58.5 pTM=0.54 ipTM=0.199 tol=1.63
2024-07-12 18:49:06,787 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=58.2 pTM=0.538 ipTM=0.191 tol=2.02
2024-07-12 18:49:46,571 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=58.5 pTM=0.54 ipTM=0.206 tol=2.45
2024-07-12 18:50:26,286 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=58.3 pTM=0.541 ipTM=0.191 tol=3.49
2024-07-12 18:51:06,018 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=58.4 pTM=0.539 ipTM=0.197 tol=3.88
2024-07-12 18:51:45,709 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=58.2 pTM=0.538 ipTM=0.189 tol=3.9
2024-07-12 18:52:25,540 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=58.5 pTM=0.54 ipTM=0.206 tol=3.76
2024-07-12 18:53:05,293 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=58.1 pTM=0.537 ipTM=0.193 tol=2.81
2024-07-12 18:53:45,057 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=58.4 pTM=0.54 ipTM=0.211 tol=3.3
2024-07-12 18:54:24,821 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=58.3 pTM=0.54 ipTM=0.193 tol=2.33
2024-07-12 18:54:24,822 alphafold2_multimer_v3_model_5_seed_000 took 1233.1s (30 recycles)
2024-07-12 18:54:26,807 reranking models by 'multimer' metric
2024-07-12 18:54:49,713 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 18:58:48,564 Relaxation took 261.8s
2024-07-12 18:58:48,565 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=56.9 pTM=0.538 ipTM=0.208
2024-07-12 19:00:59,302 Relaxation took 130.7s
2024-07-12 19:00:59,302 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=57.6 pTM=0.541 ipTM=0.193
2024-07-12 19:03:29,083 Relaxation took 149.8s
2024-07-12 19:03:29,084 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=58 pTM=0.542 ipTM=0.192
2024-07-12 19:06:07,400 Relaxation took 158.3s
2024-07-12 19:06:07,400 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=58.3 pTM=0.54 ipTM=0.193
2024-07-12 19:08:20,494 Relaxation took 133.1s
2024-07-12 19:08:20,494 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=59.4 pTM=0.55 ipTM=0.17
2024-07-12 19:08:24,061 Done