2024-07-12 17:45:49,069 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-12 17:45:53,861 Running on GPU 2024-07-12 17:46:12,424 Found 6 citations for tools or databases 2024-07-12 17:46:12,425 Query 1/1: RIMC1_NOGG (length 526) 2024-07-12 17:46:12,897 Sleeping for 5s. Reason: PENDING 2024-07-12 17:46:18,347 Sleeping for 7s. Reason: RUNNING 2024-07-12 17:46:25,771 Sleeping for 7s. Reason: RUNNING 2024-07-12 17:46:33,194 Sleeping for 8s. Reason: RUNNING 2024-07-12 17:46:41,613 Sleeping for 6s. Reason: RUNNING 2024-07-12 17:46:48,041 Sleeping for 8s. Reason: RUNNING 2024-07-12 17:46:57,674 Sleeping for 9s. Reason: PENDING 2024-07-12 17:47:07,095 Sleeping for 8s. Reason: RUNNING 2024-07-12 17:47:16,739 Setting max_seq=508, max_extra_seq=1915 2024-07-12 17:50:41,895 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=66.4 pTM=0.582 ipTM=0.218 2024-07-12 17:50:47,958 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=68.8 pTM=0.573 ipTM=0.194 tol=12.3 2024-07-12 17:50:54,003 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=68.6 pTM=0.585 ipTM=0.229 tol=3.93 2024-07-12 17:51:00,049 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=70 pTM=0.577 ipTM=0.256 tol=1.55 2024-07-12 17:51:06,089 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=70.2 pTM=0.599 ipTM=0.258 tol=2.02 2024-07-12 17:51:12,142 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=69.9 pTM=0.578 ipTM=0.218 tol=2.47 2024-07-12 17:51:18,195 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=70.5 pTM=0.599 ipTM=0.262 tol=2.16 2024-07-12 17:51:24,243 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=69.4 pTM=0.576 ipTM=0.212 tol=1.06 2024-07-12 17:51:30,295 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=71.7 pTM=0.614 ipTM=0.515 tol=10.5 2024-07-12 17:51:36,355 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=70.4 pTM=0.571 ipTM=0.289 tol=2.72 2024-07-12 17:51:42,423 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=69.8 pTM=0.576 ipTM=0.203 tol=9.57 2024-07-12 17:51:48,488 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=70.4 pTM=0.586 ipTM=0.438 tol=9.12 2024-07-12 17:51:54,555 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=70 pTM=0.567 ipTM=0.279 tol=1.62 2024-07-12 17:52:00,621 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=70.6 pTM=0.571 ipTM=0.374 tol=3.44 2024-07-12 17:52:06,692 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=69.6 pTM=0.565 ipTM=0.219 tol=1.85 2024-07-12 17:52:12,760 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=70.7 pTM=0.579 ipTM=0.451 tol=3.48 2024-07-12 17:52:18,828 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=69.6 pTM=0.568 ipTM=0.352 tol=2.36 2024-07-12 17:52:24,914 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=69.2 pTM=0.569 ipTM=0.204 tol=3 2024-07-12 17:52:30,992 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=69.4 pTM=0.572 ipTM=0.32 tol=2.3 2024-07-12 17:52:37,068 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=70.5 pTM=0.578 ipTM=0.457 tol=4.01 2024-07-12 17:52:43,156 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=69.7 pTM=0.566 ipTM=0.232 tol=3.31 2024-07-12 17:52:49,241 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=69.9 pTM=0.565 ipTM=0.207 tol=1.32 2024-07-12 17:52:55,320 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=69.4 pTM=0.574 ipTM=0.405 tol=3.22 2024-07-12 17:53:01,407 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=70 pTM=0.568 ipTM=0.289 tol=3.04 2024-07-12 17:53:07,491 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=69.9 pTM=0.57 ipTM=0.21 tol=3.08 2024-07-12 17:53:13,583 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=69.8 pTM=0.567 ipTM=0.247 tol=2.5 2024-07-12 17:53:19,663 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=69.8 pTM=0.565 ipTM=0.226 tol=4.15 2024-07-12 17:53:25,748 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=69.6 pTM=0.569 ipTM=0.222 tol=5.24 2024-07-12 17:53:31,829 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=70.3 pTM=0.594 ipTM=0.251 tol=3.55 2024-07-12 17:53:37,915 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=70.1 pTM=0.572 ipTM=0.215 tol=4.44 2024-07-12 17:53:43,990 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=70.8 pTM=0.605 ipTM=0.271 tol=3.55 2024-07-12 17:53:43,991 alphafold2_multimer_v3_model_1_seed_000 took 337.1s (30 recycles) 2024-07-12 17:53:50,260 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=67.9 pTM=0.571 ipTM=0.189 2024-07-12 17:53:56,365 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=69.2 pTM=0.566 ipTM=0.252 tol=14 2024-07-12 17:54:02,457 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=70.3 pTM=0.568 ipTM=0.424 tol=3.64 2024-07-12 17:54:08,560 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=70.9 pTM=0.563 ipTM=0.265 tol=5.67 2024-07-12 17:54:14,665 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=71.1 pTM=0.557 ipTM=0.205 tol=6.17 2024-07-12 17:54:20,764 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=70.9 pTM=0.56 ipTM=0.236 tol=3.79 2024-07-12 17:54:26,863 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=70.7 pTM=0.561 ipTM=0.193 tol=4.36 2024-07-12 17:54:32,963 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=71.4 pTM=0.57 ipTM=0.498 tol=7.92 2024-07-12 17:54:39,058 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=71.8 pTM=0.57 ipTM=0.317 tol=4.81 2024-07-12 17:54:45,159 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=71.2 pTM=0.559 ipTM=0.267 tol=8.49 2024-07-12 17:54:51,263 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=71.5 pTM=0.561 ipTM=0.214 tol=2.37 2024-07-12 17:54:57,361 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=73 pTM=0.584 ipTM=0.633 tol=7.82 2024-07-12 17:55:03,452 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=71.2 pTM=0.566 ipTM=0.273 tol=2.48 2024-07-12 17:55:09,553 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=70.9 pTM=0.563 ipTM=0.35 tol=6.94 2024-07-12 17:55:15,647 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=70.7 pTM=0.559 ipTM=0.22 tol=2.77 2024-07-12 17:55:21,744 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=72.4 pTM=0.571 ipTM=0.553 tol=7.27 2024-07-12 17:55:27,837 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=71 pTM=0.561 ipTM=0.242 tol=3.1 2024-07-12 17:55:33,935 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=70.8 pTM=0.565 ipTM=0.379 tol=9.91 2024-07-12 17:55:40,031 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=70.4 pTM=0.572 ipTM=0.216 tol=3.93 2024-07-12 17:55:46,122 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=70.9 pTM=0.567 ipTM=0.471 tol=6.34 2024-07-12 17:55:52,217 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=71.2 pTM=0.579 ipTM=0.276 tol=9.33 2024-07-12 17:55:58,305 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=71.8 pTM=0.562 ipTM=0.338 tol=4.7 2024-07-12 17:56:04,399 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=70.9 pTM=0.562 ipTM=0.23 tol=3.1 2024-07-12 17:56:10,487 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=72.9 pTM=0.583 ipTM=0.58 tol=5.48 2024-07-12 17:56:16,587 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=71.3 pTM=0.57 ipTM=0.266 tol=2.74 2024-07-12 17:56:22,684 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=71.7 pTM=0.568 ipTM=0.321 tol=7.23 2024-07-12 17:56:28,767 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=71.4 pTM=0.565 ipTM=0.256 tol=1.38 2024-07-12 17:56:34,848 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=72.6 pTM=0.575 ipTM=0.536 tol=6.41 2024-07-12 17:56:40,937 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=71.6 pTM=0.565 ipTM=0.27 tol=2.96 2024-07-12 17:56:47,030 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=71.2 pTM=0.561 ipTM=0.219 tol=7.62 2024-07-12 17:56:53,134 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=71.2 pTM=0.561 ipTM=0.295 tol=1.57 2024-07-12 17:56:53,135 alphafold2_multimer_v3_model_2_seed_000 took 189.0s (30 recycles) 2024-07-12 17:56:59,409 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=68.3 pTM=0.591 ipTM=0.242 2024-07-12 17:57:05,492 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=68.4 pTM=0.571 ipTM=0.201 tol=6.19 2024-07-12 17:57:11,572 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=69.4 pTM=0.562 ipTM=0.18 tol=9.04 2024-07-12 17:57:17,651 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=69.9 pTM=0.562 ipTM=0.292 tol=2.73 2024-07-12 17:57:23,731 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=70.6 pTM=0.58 ipTM=0.222 tol=1.63 2024-07-12 17:57:29,809 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=70 pTM=0.572 ipTM=0.205 tol=3.55 2024-07-12 17:57:35,884 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=69.9 pTM=0.576 ipTM=0.211 tol=2.98 2024-07-12 17:57:41,965 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=70.4 pTM=0.568 ipTM=0.199 tol=2.16 2024-07-12 17:57:48,048 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=70.2 pTM=0.566 ipTM=0.193 tol=2.68 2024-07-12 17:57:54,128 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=70.6 pTM=0.572 ipTM=0.246 tol=1.95 2024-07-12 17:58:00,209 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=70.4 pTM=0.57 ipTM=0.2 tol=2.64 2024-07-12 17:58:06,287 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=70.5 pTM=0.571 ipTM=0.203 tol=4.21 2024-07-12 17:58:12,361 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=70.2 pTM=0.575 ipTM=0.21 tol=3.68 2024-07-12 17:58:18,438 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=70.3 pTM=0.565 ipTM=0.191 tol=4.18 2024-07-12 17:58:24,508 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=70.1 pTM=0.58 ipTM=0.218 tol=5.76 2024-07-12 17:58:30,582 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=70.1 pTM=0.577 ipTM=0.209 tol=5.2 2024-07-12 17:58:36,666 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=70.3 pTM=0.562 ipTM=0.182 tol=3.99 2024-07-12 17:58:42,750 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=70.2 pTM=0.575 ipTM=0.208 tol=2.77 2024-07-12 17:58:48,831 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=70.2 pTM=0.568 ipTM=0.198 tol=2.41 2024-07-12 17:58:54,913 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=70.1 pTM=0.57 ipTM=0.199 tol=3.3 2024-07-12 17:59:00,991 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=70.1 pTM=0.569 ipTM=0.204 tol=4.53 2024-07-12 17:59:07,081 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=70.2 pTM=0.565 ipTM=0.256 tol=2.7 2024-07-12 17:59:13,163 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=69.9 pTM=0.569 ipTM=0.209 tol=3.93 2024-07-12 17:59:19,247 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=70.2 pTM=0.577 ipTM=0.215 tol=4.45 2024-07-12 17:59:25,329 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=69.9 pTM=0.561 ipTM=0.19 tol=3.58 2024-07-12 17:59:31,414 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=69.6 pTM=0.586 ipTM=0.227 tol=6.83 2024-07-12 17:59:37,495 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=70.4 pTM=0.569 ipTM=0.198 tol=6.19 2024-07-12 17:59:43,574 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=70.6 pTM=0.555 ipTM=0.189 tol=0.924 2024-07-12 17:59:49,654 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=71.1 pTM=0.6 ipTM=0.262 tol=4.14 2024-07-12 17:59:55,733 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=70.8 pTM=0.566 ipTM=0.194 tol=2.8 2024-07-12 18:00:01,812 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=70.4 pTM=0.584 ipTM=0.229 tol=4.9 2024-07-12 18:00:01,812 alphafold2_multimer_v3_model_3_seed_000 took 188.5s (30 recycles) 2024-07-12 18:00:10,465 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=65.6 pTM=0.589 ipTM=0.234 2024-07-12 18:00:16,542 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=67.4 pTM=0.628 ipTM=0.353 tol=2.44 2024-07-12 18:00:22,617 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=67.1 pTM=0.572 ipTM=0.205 tol=3.95 2024-07-12 18:00:28,710 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=66.3 pTM=0.579 ipTM=0.213 tol=4.74 2024-07-12 18:00:34,796 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=66.8 pTM=0.574 ipTM=0.206 tol=4.8 2024-07-12 18:00:40,875 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=66.4 pTM=0.578 ipTM=0.21 tol=2.14 2024-07-12 18:00:46,957 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=66.9 pTM=0.581 ipTM=0.219 tol=1.35 2024-07-12 18:00:53,037 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=66.5 pTM=0.581 ipTM=0.217 tol=1.23 2024-07-12 18:00:59,121 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=66.9 pTM=0.58 ipTM=0.215 tol=2.09 2024-07-12 18:01:05,198 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=67 pTM=0.575 ipTM=0.205 tol=2.37 2024-07-12 18:01:11,279 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=67.2 pTM=0.573 ipTM=0.2 tol=2.28 2024-07-12 18:01:17,357 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=66.5 pTM=0.574 ipTM=0.203 tol=2.59 2024-07-12 18:01:23,437 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=67.2 pTM=0.563 ipTM=0.175 tol=3.68 2024-07-12 18:01:29,523 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=66.8 pTM=0.569 ipTM=0.193 tol=2.72 2024-07-12 18:01:35,605 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=66.2 pTM=0.571 ipTM=0.198 tol=2.28 2024-07-12 18:01:41,696 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=66.9 pTM=0.568 ipTM=0.189 tol=5.14 2024-07-12 18:01:47,783 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=66.7 pTM=0.568 ipTM=0.243 tol=3.64 2024-07-12 18:01:53,861 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=66.4 pTM=0.575 ipTM=0.204 tol=3 2024-07-12 18:01:59,941 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=66.9 pTM=0.582 ipTM=0.222 tol=2.25 2024-07-12 18:02:06,024 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=66.6 pTM=0.571 ipTM=0.193 tol=4.01 2024-07-12 18:02:12,103 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=66.4 pTM=0.577 ipTM=0.273 tol=2.15 2024-07-12 18:02:18,186 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=66.5 pTM=0.572 ipTM=0.202 tol=2.06 2024-07-12 18:02:24,271 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=66.4 pTM=0.574 ipTM=0.202 tol=1.69 2024-07-12 18:02:30,346 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=66.2 pTM=0.577 ipTM=0.211 tol=1.91 2024-07-12 18:02:36,428 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=66.1 pTM=0.577 ipTM=0.213 tol=1.51 2024-07-12 18:02:42,510 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=66.4 pTM=0.584 ipTM=0.226 tol=2.07 2024-07-12 18:02:48,595 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=66.9 pTM=0.579 ipTM=0.214 tol=1.59 2024-07-12 18:02:54,681 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66.8 pTM=0.579 ipTM=0.216 tol=2.21 2024-07-12 18:03:00,777 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=67.4 pTM=0.578 ipTM=0.205 tol=3.53 2024-07-12 18:03:06,864 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=67.3 pTM=0.57 ipTM=0.195 tol=3.87 2024-07-12 18:03:12,951 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=66.7 pTM=0.577 ipTM=0.207 tol=2.16 2024-07-12 18:03:12,951 alphafold2_multimer_v3_model_4_seed_000 took 188.6s (30 recycles) 2024-07-12 18:03:19,237 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=70.4 pTM=0.599 ipTM=0.691 2024-07-12 18:03:25,335 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=68.7 pTM=0.567 ipTM=0.316 tol=4.69 2024-07-12 18:03:31,433 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=70.2 pTM=0.593 ipTM=0.287 tol=9.02 2024-07-12 18:03:37,529 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=70 pTM=0.595 ipTM=0.251 tol=2.59 2024-07-12 18:03:43,626 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=70.3 pTM=0.591 ipTM=0.246 tol=1.53 2024-07-12 18:03:49,723 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=69.2 pTM=0.576 ipTM=0.212 tol=2.57 2024-07-12 18:03:55,820 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=70.2 pTM=0.577 ipTM=0.521 tol=6.48 2024-07-12 18:04:01,920 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=70.6 pTM=0.565 ipTM=0.349 tol=4.97 2024-07-12 18:04:08,017 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=71.4 pTM=0.576 ipTM=0.534 tol=3.23 2024-07-12 18:04:14,108 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=70.9 pTM=0.568 ipTM=0.486 tol=2 2024-07-12 18:04:20,207 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=70.7 pTM=0.572 ipTM=0.484 tol=4.36 2024-07-12 18:04:26,304 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=71 pTM=0.569 ipTM=0.478 tol=4.04 2024-07-12 18:04:32,403 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=70.6 pTM=0.567 ipTM=0.405 tol=3.13 2024-07-12 18:04:38,502 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=70 pTM=0.565 ipTM=0.399 tol=4.88 2024-07-12 18:04:44,594 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=70.4 pTM=0.569 ipTM=0.412 tol=4.76 2024-07-12 18:04:50,689 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=70.4 pTM=0.591 ipTM=0.247 tol=8.62 2024-07-12 18:04:56,782 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=69.9 pTM=0.594 ipTM=0.279 tol=5.57 2024-07-12 18:05:02,879 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=70.2 pTM=0.609 ipTM=0.283 tol=1.22 2024-07-12 18:05:08,974 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=69.9 pTM=0.6 ipTM=0.266 tol=1.34 2024-07-12 18:05:15,061 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=70.2 pTM=0.607 ipTM=0.281 tol=2.5 2024-07-12 18:05:21,153 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=69.9 pTM=0.592 ipTM=0.251 tol=1.54 2024-07-12 18:05:27,242 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=70.5 pTM=0.605 ipTM=0.28 tol=1.68 2024-07-12 18:05:33,332 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=69.6 pTM=0.589 ipTM=0.244 tol=1.27 2024-07-12 18:05:39,422 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=70.2 pTM=0.603 ipTM=0.272 tol=1.39 2024-07-12 18:05:45,510 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=69.8 pTM=0.6 ipTM=0.266 tol=0.959 2024-07-12 18:05:51,600 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=69.5 pTM=0.588 ipTM=0.238 tol=2.1 2024-07-12 18:05:57,697 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=70.1 pTM=0.595 ipTM=0.256 tol=1.99 2024-07-12 18:06:03,800 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=70.6 pTM=0.602 ipTM=0.267 tol=0.698 2024-07-12 18:06:09,899 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=69.9 pTM=0.578 ipTM=0.235 tol=5.39 2024-07-12 18:06:15,984 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=70.7 pTM=0.615 ipTM=0.3 tol=3.71 2024-07-12 18:06:22,073 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=69.9 pTM=0.602 ipTM=0.269 tol=1.62 2024-07-12 18:06:22,074 alphafold2_multimer_v3_model_5_seed_000 took 188.9s (30 recycles) 2024-07-12 18:06:22,262 reranking models by 'multimer' metric 2024-07-12 18:06:23,107 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-12 18:06:41,390 Relaxation took 19.1s 2024-07-12 18:06:41,390 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=71.2 pTM=0.561 ipTM=0.295 2024-07-12 18:06:56,660 Relaxation took 15.3s 2024-07-12 18:06:56,660 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=70.8 pTM=0.605 ipTM=0.271 2024-07-12 18:07:22,112 Relaxation took 25.5s 2024-07-12 18:07:22,112 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=69.9 pTM=0.602 ipTM=0.269 2024-07-12 18:07:49,659 Relaxation took 27.5s 2024-07-12 18:07:49,659 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=70.4 pTM=0.584 ipTM=0.229 2024-07-12 18:08:31,474 Relaxation took 41.8s 2024-07-12 18:08:31,475 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=66.7 pTM=0.577 ipTM=0.207 2024-07-12 18:08:32,596 Done