2024-07-12 17:55:01,562 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-12 17:55:01,883 Running on GPU 2024-07-12 17:55:11,019 Found 6 citations for tools or databases 2024-07-12 17:55:11,019 Query 1/1: RIOX2_RAB34 (length 724) 2024-07-12 17:55:11,455 Sleeping for 9s. Reason: PENDING 2024-07-12 17:55:20,876 Sleeping for 7s. Reason: RUNNING 2024-07-12 17:55:28,312 Sleeping for 10s. Reason: RUNNING 2024-07-12 17:55:38,738 Sleeping for 7s. Reason: RUNNING 2024-07-12 17:55:46,154 Sleeping for 10s. Reason: RUNNING 2024-07-12 17:55:56,591 Sleeping for 10s. Reason: RUNNING 2024-07-12 17:56:07,011 Sleeping for 5s. Reason: RUNNING 2024-07-12 17:56:12,413 Sleeping for 6s. Reason: RUNNING 2024-07-12 17:56:18,846 Sleeping for 5s. Reason: RUNNING 2024-07-12 17:56:24,277 Sleeping for 9s. Reason: RUNNING 2024-07-12 17:56:33,699 Sleeping for 5s. Reason: RUNNING 2024-07-12 17:56:39,110 Sleeping for 5s. Reason: RUNNING 2024-07-12 17:56:46,236 Sleeping for 6s. Reason: PENDING 2024-07-12 17:56:52,651 Sleeping for 6s. Reason: RUNNING 2024-07-12 17:56:59,066 Sleeping for 5s. Reason: RUNNING 2024-07-12 17:57:04,472 Sleeping for 9s. Reason: RUNNING 2024-07-12 17:57:13,898 Sleeping for 9s. Reason: RUNNING 2024-07-12 17:57:23,330 Sleeping for 9s. Reason: RUNNING 2024-07-12 17:57:35,383 Setting max_seq=508, max_extra_seq=2048 2024-07-12 18:00:41,276 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=77.1 pTM=0.614 ipTM=0.171 2024-07-12 18:00:51,872 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=77.9 pTM=0.624 ipTM=0.186 tol=8.79 2024-07-12 18:01:02,472 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=77.6 pTM=0.621 ipTM=0.18 tol=2.84 2024-07-12 18:01:13,087 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=78.2 pTM=0.624 ipTM=0.197 tol=0.98 2024-07-12 18:01:23,727 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=78.3 pTM=0.622 ipTM=0.186 tol=3.16 2024-07-12 18:01:34,371 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=78.2 pTM=0.626 ipTM=0.212 tol=4.07 2024-07-12 18:01:45,024 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=79.1 pTM=0.635 ipTM=0.252 tol=2.84 2024-07-12 18:01:55,680 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=81.1 pTM=0.688 ipTM=0.448 tol=3.53 2024-07-12 18:02:06,353 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=82.5 pTM=0.717 ipTM=0.513 tol=1.03 2024-07-12 18:02:17,029 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=82.1 pTM=0.704 ipTM=0.484 tol=0.68 2024-07-12 18:02:27,714 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=81.5 pTM=0.676 ipTM=0.408 tol=0.616 2024-07-12 18:02:38,400 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=81.7 pTM=0.696 ipTM=0.46 tol=0.384 2024-07-12 18:02:38,401 alphafold2_multimer_v3_model_1_seed_000 took 250.3s (11 recycles) 2024-07-12 18:02:49,431 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=77.6 pTM=0.613 ipTM=0.169 2024-07-12 18:03:00,167 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=79.4 pTM=0.617 ipTM=0.17 tol=3.57 2024-07-12 18:03:10,891 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=80.1 pTM=0.618 ipTM=0.182 tol=7.87 2024-07-12 18:03:21,600 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=79.9 pTM=0.623 ipTM=0.198 tol=4.97 2024-07-12 18:03:32,332 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=80.2 pTM=0.618 ipTM=0.179 tol=2.85 2024-07-12 18:03:43,046 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=79.9 pTM=0.623 ipTM=0.199 tol=1.98 2024-07-12 18:03:53,772 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=80.2 pTM=0.619 ipTM=0.182 tol=1.34 2024-07-12 18:04:04,480 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=79.9 pTM=0.623 ipTM=0.195 tol=2.13 2024-07-12 18:04:15,204 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=80.3 pTM=0.618 ipTM=0.174 tol=2.64 2024-07-12 18:04:25,911 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=79.9 pTM=0.624 ipTM=0.2 tol=1.43 2024-07-12 18:04:36,620 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=80.2 pTM=0.616 ipTM=0.177 tol=1.28 2024-07-12 18:04:47,333 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=79.8 pTM=0.624 ipTM=0.203 tol=2.64 2024-07-12 18:04:58,056 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=80.5 pTM=0.617 ipTM=0.177 tol=2.56 2024-07-12 18:05:08,761 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=79.9 pTM=0.627 ipTM=0.215 tol=5.57 2024-07-12 18:05:19,480 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=80.4 pTM=0.616 ipTM=0.18 tol=3.64 2024-07-12 18:05:30,189 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=80.1 pTM=0.626 ipTM=0.208 tol=3.68 2024-07-12 18:05:40,907 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=80.6 pTM=0.616 ipTM=0.171 tol=5.24 2024-07-12 18:05:51,611 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=79.9 pTM=0.625 ipTM=0.201 tol=2.73 2024-07-12 18:06:02,326 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=80.3 pTM=0.613 ipTM=0.166 tol=3.15 2024-07-12 18:06:13,044 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=79.9 pTM=0.624 ipTM=0.201 tol=5.12 2024-07-12 18:06:23,775 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=80.6 pTM=0.615 ipTM=0.169 tol=4.47 2024-07-12 18:06:34,492 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=80.1 pTM=0.626 ipTM=0.206 tol=4.39 2024-07-12 18:06:45,231 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=80.6 pTM=0.616 ipTM=0.17 tol=4.41 2024-07-12 18:06:55,956 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=79.8 pTM=0.624 ipTM=0.201 tol=3.97 2024-07-12 18:07:06,688 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=80.1 pTM=0.614 ipTM=0.17 tol=4.77 2024-07-12 18:07:17,398 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=79.6 pTM=0.621 ipTM=0.197 tol=5.34 2024-07-12 18:07:28,119 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=80.2 pTM=0.617 ipTM=0.176 tol=1.6 2024-07-12 18:07:38,825 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=79.7 pTM=0.624 ipTM=0.198 tol=2.26 2024-07-12 18:07:49,541 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=80.1 pTM=0.615 ipTM=0.174 tol=1.52 2024-07-12 18:08:00,257 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=79.8 pTM=0.625 ipTM=0.207 tol=1.84 2024-07-12 18:08:10,992 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=80.3 pTM=0.62 ipTM=0.18 tol=0.679 2024-07-12 18:08:10,992 alphafold2_multimer_v3_model_2_seed_000 took 332.3s (30 recycles) 2024-07-12 18:08:22,066 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=77.3 pTM=0.614 ipTM=0.176 2024-07-12 18:08:32,814 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=78.1 pTM=0.612 ipTM=0.15 tol=8.14 2024-07-12 18:08:43,545 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=78.3 pTM=0.619 ipTM=0.173 tol=5.62 2024-07-12 18:08:54,304 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=77.9 pTM=0.612 ipTM=0.152 tol=4.79 2024-07-12 18:09:05,033 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=78.4 pTM=0.617 ipTM=0.168 tol=6.54 2024-07-12 18:09:15,759 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=78.4 pTM=0.616 ipTM=0.166 tol=3.67 2024-07-12 18:09:26,494 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=78.3 pTM=0.617 ipTM=0.17 tol=2.22 2024-07-12 18:09:37,229 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=78.6 pTM=0.614 ipTM=0.156 tol=3.52 2024-07-12 18:09:47,967 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=78.6 pTM=0.616 ipTM=0.164 tol=2.91 2024-07-12 18:09:58,681 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=78.2 pTM=0.614 ipTM=0.157 tol=7.46 2024-07-12 18:10:09,389 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=78.3 pTM=0.62 ipTM=0.186 tol=4.28 2024-07-12 18:10:20,088 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=78 pTM=0.618 ipTM=0.167 tol=2.27 2024-07-12 18:10:30,786 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=78.1 pTM=0.621 ipTM=0.198 tol=2.13 2024-07-12 18:10:41,475 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=77.9 pTM=0.619 ipTM=0.172 tol=3.22 2024-07-12 18:10:52,179 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=78.2 pTM=0.622 ipTM=0.183 tol=2.92 2024-07-12 18:11:02,877 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=78.1 pTM=0.618 ipTM=0.17 tol=2.13 2024-07-12 18:11:13,577 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=77.9 pTM=0.625 ipTM=0.189 tol=3.06 2024-07-12 18:11:24,282 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=78.1 pTM=0.619 ipTM=0.174 tol=3.38 2024-07-12 18:11:34,983 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=77.9 pTM=0.621 ipTM=0.183 tol=3.41 2024-07-12 18:11:45,675 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=77.5 pTM=0.617 ipTM=0.173 tol=3 2024-07-12 18:11:56,366 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=77.6 pTM=0.623 ipTM=0.227 tol=4.19 2024-07-12 18:12:07,077 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=77.7 pTM=0.615 ipTM=0.162 tol=4.29 2024-07-12 18:12:17,773 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=78.2 pTM=0.617 ipTM=0.17 tol=1.73 2024-07-12 18:12:28,469 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=77.5 pTM=0.615 ipTM=0.165 tol=2.29 2024-07-12 18:12:39,173 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=77.9 pTM=0.618 ipTM=0.172 tol=1.73 2024-07-12 18:12:49,879 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=77.8 pTM=0.617 ipTM=0.169 tol=2.39 2024-07-12 18:13:00,593 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=77.9 pTM=0.62 ipTM=0.177 tol=4.01 2024-07-12 18:13:11,293 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=77.6 pTM=0.618 ipTM=0.171 tol=3.5 2024-07-12 18:13:22,004 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=78.2 pTM=0.619 ipTM=0.175 tol=2.31 2024-07-12 18:13:32,704 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=77.8 pTM=0.619 ipTM=0.174 tol=2.46 2024-07-12 18:13:43,408 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=78.1 pTM=0.623 ipTM=0.187 tol=3.77 2024-07-12 18:13:43,409 alphafold2_multimer_v3_model_3_seed_000 took 332.1s (30 recycles) 2024-07-12 18:13:54,465 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=77.4 pTM=0.617 ipTM=0.18 2024-07-12 18:14:05,222 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=78.8 pTM=0.623 ipTM=0.174 tol=4.23 2024-07-12 18:14:15,988 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=78.3 pTM=0.622 ipTM=0.173 tol=5.23 2024-07-12 18:14:26,745 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=78.8 pTM=0.621 ipTM=0.179 tol=3.33 2024-07-12 18:14:37,502 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=78.1 pTM=0.62 ipTM=0.17 tol=5.25 2024-07-12 18:14:48,251 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=78.2 pTM=0.618 ipTM=0.163 tol=3.43 2024-07-12 18:14:59,018 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=78.4 pTM=0.62 ipTM=0.167 tol=2.36 2024-07-12 18:15:09,795 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=78.8 pTM=0.62 ipTM=0.167 tol=1.4 2024-07-12 18:15:20,566 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=78.7 pTM=0.619 ipTM=0.162 tol=2.24 2024-07-12 18:15:31,326 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=78.8 pTM=0.621 ipTM=0.168 tol=3.68 2024-07-12 18:15:42,083 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=78.9 pTM=0.625 ipTM=0.183 tol=4.05 2024-07-12 18:15:52,848 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=79.4 pTM=0.624 ipTM=0.182 tol=2.74 2024-07-12 18:16:03,617 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=78.8 pTM=0.62 ipTM=0.169 tol=2.07 2024-07-12 18:16:14,368 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=78.9 pTM=0.621 ipTM=0.174 tol=1.5 2024-07-12 18:16:25,120 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=78.6 pTM=0.621 ipTM=0.178 tol=1.52 2024-07-12 18:16:35,852 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=79.9 pTM=0.654 ipTM=0.289 tol=3.28 2024-07-12 18:16:46,603 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=79.4 pTM=0.628 ipTM=0.202 tol=1.57 2024-07-12 18:16:57,360 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=79.2 pTM=0.626 ipTM=0.196 tol=1.39 2024-07-12 18:17:08,112 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=79.1 pTM=0.636 ipTM=0.226 tol=1.4 2024-07-12 18:17:18,864 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=79.5 pTM=0.63 ipTM=0.211 tol=0.777 2024-07-12 18:17:29,624 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=78.8 pTM=0.625 ipTM=0.189 tol=1.57 2024-07-12 18:17:40,367 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=79.6 pTM=0.646 ipTM=0.263 tol=2.51 2024-07-12 18:17:51,120 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=79.2 pTM=0.63 ipTM=0.214 tol=1.25 2024-07-12 18:18:01,877 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=78.8 pTM=0.622 ipTM=0.185 tol=3.85 2024-07-12 18:18:12,627 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=78.6 pTM=0.63 ipTM=0.21 tol=2.33 2024-07-12 18:18:23,376 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=79.1 pTM=0.63 ipTM=0.211 tol=1.66 2024-07-12 18:18:34,132 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=78.9 pTM=0.634 ipTM=0.219 tol=1.01 2024-07-12 18:18:44,879 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=79.5 pTM=0.646 ipTM=0.259 tol=2.67 2024-07-12 18:18:55,623 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=79.2 pTM=0.642 ipTM=0.25 tol=2.65 2024-07-12 18:19:06,360 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=79 pTM=0.638 ipTM=0.241 tol=1.77 2024-07-12 18:19:17,107 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=79.6 pTM=0.647 ipTM=0.266 tol=1.03 2024-07-12 18:19:17,108 alphafold2_multimer_v3_model_4_seed_000 took 333.4s (30 recycles) 2024-07-12 18:19:28,173 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=77.4 pTM=0.614 ipTM=0.163 2024-07-12 18:19:38,941 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=79.2 pTM=0.616 ipTM=0.145 tol=5.61 2024-07-12 18:19:49,709 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=79.5 pTM=0.619 ipTM=0.158 tol=5.12 2024-07-12 18:20:00,486 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=79.6 pTM=0.612 ipTM=0.142 tol=4.52 2024-07-12 18:20:11,259 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=79.5 pTM=0.615 ipTM=0.145 tol=3.24 2024-07-12 18:20:22,027 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=79.6 pTM=0.618 ipTM=0.158 tol=3.5 2024-07-12 18:20:32,801 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=79.6 pTM=0.62 ipTM=0.16 tol=3.08 2024-07-12 18:20:43,578 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=79.9 pTM=0.617 ipTM=0.152 tol=1.8 2024-07-12 18:20:54,356 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=79.7 pTM=0.616 ipTM=0.149 tol=1.82 2024-07-12 18:21:05,131 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=79.6 pTM=0.615 ipTM=0.146 tol=0.893 2024-07-12 18:21:15,898 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=79.4 pTM=0.617 ipTM=0.153 tol=2.46 2024-07-12 18:21:26,668 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=79.8 pTM=0.623 ipTM=0.17 tol=3.74 2024-07-12 18:21:37,430 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=79.4 pTM=0.62 ipTM=0.161 tol=2.65 2024-07-12 18:21:48,206 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=79.9 pTM=0.612 ipTM=0.141 tol=4.2 2024-07-12 18:21:58,986 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=79.8 pTM=0.618 ipTM=0.155 tol=3.35 2024-07-12 18:22:09,758 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=79.6 pTM=0.618 ipTM=0.152 tol=3 2024-07-12 18:22:20,528 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=79.4 pTM=0.619 ipTM=0.158 tol=4.13 2024-07-12 18:22:31,295 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=79.7 pTM=0.62 ipTM=0.162 tol=1.13 2024-07-12 18:22:42,060 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=79.4 pTM=0.623 ipTM=0.171 tol=1.89 2024-07-12 18:22:52,827 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=79.6 pTM=0.614 ipTM=0.146 tol=2.32 2024-07-12 18:23:03,601 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=79.5 pTM=0.615 ipTM=0.143 tol=2.2 2024-07-12 18:23:14,374 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=79.6 pTM=0.618 ipTM=0.158 tol=3.24 2024-07-12 18:23:25,144 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=79.6 pTM=0.615 ipTM=0.148 tol=1.87 2024-07-12 18:23:35,914 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=79.4 pTM=0.616 ipTM=0.15 tol=3.06 2024-07-12 18:23:46,677 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=79.2 pTM=0.619 ipTM=0.158 tol=2.13 2024-07-12 18:23:57,445 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=79.5 pTM=0.612 ipTM=0.14 tol=2.7 2024-07-12 18:24:08,210 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=79.4 pTM=0.618 ipTM=0.156 tol=2.94 2024-07-12 18:24:18,983 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=79.7 pTM=0.615 ipTM=0.147 tol=3.37 2024-07-12 18:24:29,748 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=79.6 pTM=0.62 ipTM=0.159 tol=1.2 2024-07-12 18:24:40,511 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=79.5 pTM=0.618 ipTM=0.158 tol=4.13 2024-07-12 18:24:51,264 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=79.3 pTM=0.621 ipTM=0.167 tol=1.71 2024-07-12 18:24:51,264 alphafold2_multimer_v3_model_5_seed_000 took 333.8s (30 recycles) 2024-07-12 18:24:51,596 reranking models by 'multimer' metric 2024-07-12 18:25:10,824 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-12 18:25:35,894 Relaxation took 44.3s 2024-07-12 18:25:35,894 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=81.7 pTM=0.696 ipTM=0.46 2024-07-12 18:26:08,100 Relaxation took 32.2s 2024-07-12 18:26:08,100 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=79.6 pTM=0.647 ipTM=0.266 2024-07-12 18:27:01,663 Relaxation took 53.6s 2024-07-12 18:27:01,663 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=78.1 pTM=0.623 ipTM=0.187 2024-07-12 18:27:46,086 Relaxation took 44.4s 2024-07-12 18:27:46,086 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=80.3 pTM=0.62 ipTM=0.18 2024-07-12 18:28:12,097 Relaxation took 26.0s 2024-07-12 18:28:12,097 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=79.3 pTM=0.621 ipTM=0.167 2024-07-12 18:28:16,492 Done