2024-07-12 17:56:26,281 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-12 17:56:26,607 Running on GPU 2024-07-12 17:56:34,369 Found 6 citations for tools or databases 2024-07-12 17:56:34,370 Query 1/1: RL18A_SIA8C (length 556) 2024-07-12 17:56:34,849 Sleeping for 9s. Reason: PENDING 2024-07-12 17:56:44,287 Sleeping for 5s. Reason: RUNNING 2024-07-12 17:56:49,726 Sleeping for 10s. Reason: RUNNING 2024-07-12 17:57:00,164 Sleeping for 5s. Reason: RUNNING 2024-07-12 17:57:05,588 Sleeping for 5s. Reason: RUNNING 2024-07-12 17:57:12,486 Sleeping for 6s. Reason: PENDING 2024-07-12 17:57:18,911 Sleeping for 9s. Reason: RUNNING 2024-07-12 17:57:28,350 Sleeping for 7s. Reason: RUNNING 2024-07-12 17:57:37,360 Setting max_seq=508, max_extra_seq=2048 2024-07-12 18:00:41,305 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=72.5 pTM=0.572 ipTM=0.13 2024-07-12 18:00:47,942 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=72.9 pTM=0.572 ipTM=0.13 tol=6.95 2024-07-12 18:00:54,585 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=73.6 pTM=0.57 ipTM=0.188 tol=3.81 2024-07-12 18:01:01,231 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=73.9 pTM=0.57 ipTM=0.143 tol=1.82 2024-07-12 18:01:07,876 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=74 pTM=0.571 ipTM=0.134 tol=1.58 2024-07-12 18:01:14,532 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=73.6 pTM=0.569 ipTM=0.129 tol=1.25 2024-07-12 18:01:21,199 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=74.1 pTM=0.57 ipTM=0.141 tol=1.88 2024-07-12 18:01:27,854 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=73.9 pTM=0.57 ipTM=0.149 tol=1.44 2024-07-12 18:01:34,518 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=73.6 pTM=0.569 ipTM=0.136 tol=4.09 2024-07-12 18:01:41,182 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=73.1 pTM=0.572 ipTM=0.135 tol=3.63 2024-07-12 18:01:47,835 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=73.5 pTM=0.571 ipTM=0.135 tol=0.723 2024-07-12 18:01:54,525 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=73.1 pTM=0.573 ipTM=0.139 tol=1.29 2024-07-12 18:02:01,193 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=72.8 pTM=0.574 ipTM=0.141 tol=1.03 2024-07-12 18:02:07,861 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=73.2 pTM=0.573 ipTM=0.139 tol=1.52 2024-07-12 18:02:14,525 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=72.9 pTM=0.572 ipTM=0.135 tol=0.995 2024-07-12 18:02:21,185 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=73.2 pTM=0.573 ipTM=0.136 tol=1.72 2024-07-12 18:02:27,860 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=73.6 pTM=0.573 ipTM=0.136 tol=1.88 2024-07-12 18:02:34,527 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=73.8 pTM=0.574 ipTM=0.136 tol=0.769 2024-07-12 18:02:41,191 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=74.1 pTM=0.572 ipTM=0.132 tol=2.2 2024-07-12 18:02:47,860 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=74.1 pTM=0.57 ipTM=0.132 tol=1.89 2024-07-12 18:02:54,530 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=74.3 pTM=0.569 ipTM=0.127 tol=1.64 2024-07-12 18:03:01,247 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=74.5 pTM=0.569 ipTM=0.13 tol=1.31 2024-07-12 18:03:07,961 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=74.6 pTM=0.57 ipTM=0.129 tol=1.58 2024-07-12 18:03:14,653 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=74.6 pTM=0.571 ipTM=0.132 tol=1.09 2024-07-12 18:03:21,333 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=74 pTM=0.572 ipTM=0.134 tol=1.29 2024-07-12 18:03:27,997 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=74.4 pTM=0.57 ipTM=0.131 tol=0.789 2024-07-12 18:03:34,672 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=74.3 pTM=0.57 ipTM=0.131 tol=1.44 2024-07-12 18:03:41,345 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=74.2 pTM=0.57 ipTM=0.137 tol=1.03 2024-07-12 18:03:48,019 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=73.8 pTM=0.573 ipTM=0.135 tol=0.911 2024-07-12 18:03:54,689 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=73.9 pTM=0.572 ipTM=0.133 tol=1.18 2024-07-12 18:04:01,363 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=73.9 pTM=0.574 ipTM=0.139 tol=1.54 2024-07-12 18:04:01,363 alphafold2_multimer_v3_model_1_seed_000 took 331.7s (30 recycles) 2024-07-12 18:04:08,224 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=75.4 pTM=0.577 ipTM=0.278 2024-07-12 18:04:14,894 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=76.2 pTM=0.572 ipTM=0.186 tol=4.89 2024-07-12 18:04:21,572 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=76.2 pTM=0.568 ipTM=0.137 tol=5.06 2024-07-12 18:04:28,255 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=75.7 pTM=0.567 ipTM=0.132 tol=4.67 2024-07-12 18:04:34,947 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=75.2 pTM=0.566 ipTM=0.13 tol=3.38 2024-07-12 18:04:41,636 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=75.2 pTM=0.567 ipTM=0.13 tol=1.94 2024-07-12 18:04:48,325 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=75 pTM=0.567 ipTM=0.129 tol=2 2024-07-12 18:04:55,016 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=74.9 pTM=0.567 ipTM=0.132 tol=2.75 2024-07-12 18:05:01,708 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=73.6 pTM=0.567 ipTM=0.132 tol=3.96 2024-07-12 18:05:08,400 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=74.2 pTM=0.567 ipTM=0.126 tol=8.75 2024-07-12 18:05:15,069 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=74.8 pTM=0.572 ipTM=0.145 tol=7.76 2024-07-12 18:05:21,765 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=75.3 pTM=0.567 ipTM=0.127 tol=4.05 2024-07-12 18:05:28,445 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=74.8 pTM=0.568 ipTM=0.132 tol=1.76 2024-07-12 18:05:35,124 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=75.6 pTM=0.567 ipTM=0.129 tol=1.68 2024-07-12 18:05:41,804 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=75.1 pTM=0.566 ipTM=0.126 tol=1.56 2024-07-12 18:05:48,490 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=75.6 pTM=0.566 ipTM=0.125 tol=2.88 2024-07-12 18:05:55,174 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=75.6 pTM=0.566 ipTM=0.126 tol=3.66 2024-07-12 18:06:01,860 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=75.8 pTM=0.567 ipTM=0.128 tol=1.98 2024-07-12 18:06:08,538 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=75.8 pTM=0.566 ipTM=0.138 tol=1.63 2024-07-12 18:06:15,212 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=75.9 pTM=0.565 ipTM=0.143 tol=2.76 2024-07-12 18:06:21,889 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=76.1 pTM=0.566 ipTM=0.138 tol=2.14 2024-07-12 18:06:28,574 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=76 pTM=0.565 ipTM=0.141 tol=2.16 2024-07-12 18:06:35,256 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=76.4 pTM=0.565 ipTM=0.188 tol=1.26 2024-07-12 18:06:41,950 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=76.5 pTM=0.567 ipTM=0.173 tol=1.6 2024-07-12 18:06:48,638 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=75 pTM=0.566 ipTM=0.168 tol=3.51 2024-07-12 18:06:55,318 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=76.3 pTM=0.567 ipTM=0.175 tol=4.77 2024-07-12 18:07:01,998 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=76.6 pTM=0.567 ipTM=0.151 tol=2.04 2024-07-12 18:07:08,685 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=76.1 pTM=0.567 ipTM=0.152 tol=3.88 2024-07-12 18:07:15,368 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=75.6 pTM=0.568 ipTM=0.16 tol=1.98 2024-07-12 18:07:22,054 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=76.1 pTM=0.567 ipTM=0.141 tol=2.08 2024-07-12 18:07:28,737 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=75.7 pTM=0.569 ipTM=0.135 tol=2.43 2024-07-12 18:07:28,738 alphafold2_multimer_v3_model_2_seed_000 took 207.2s (30 recycles) 2024-07-12 18:07:35,606 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=72.9 pTM=0.573 ipTM=0.228 2024-07-12 18:07:42,285 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=72.2 pTM=0.577 ipTM=0.175 tol=8.23 2024-07-12 18:07:48,951 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=71.5 pTM=0.572 ipTM=0.16 tol=5.95 2024-07-12 18:07:55,621 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=70.9 pTM=0.575 ipTM=0.171 tol=2.86 2024-07-12 18:08:02,303 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=70.6 pTM=0.577 ipTM=0.177 tol=2.91 2024-07-12 18:08:08,985 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=70.1 pTM=0.577 ipTM=0.177 tol=2.24 2024-07-12 18:08:15,680 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=70.3 pTM=0.579 ipTM=0.178 tol=0.891 2024-07-12 18:08:22,374 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=70.2 pTM=0.58 ipTM=0.176 tol=2.43 2024-07-12 18:08:29,067 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=70.3 pTM=0.581 ipTM=0.181 tol=1.7 2024-07-12 18:08:35,758 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=69.9 pTM=0.58 ipTM=0.178 tol=1.67 2024-07-12 18:08:42,448 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=70.2 pTM=0.581 ipTM=0.181 tol=1.83 2024-07-12 18:08:49,142 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=70.2 pTM=0.58 ipTM=0.181 tol=2.29 2024-07-12 18:08:55,832 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=69.9 pTM=0.582 ipTM=0.183 tol=2.28 2024-07-12 18:09:02,528 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=69.9 pTM=0.58 ipTM=0.177 tol=2.58 2024-07-12 18:09:09,237 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=69.6 pTM=0.583 ipTM=0.177 tol=1.81 2024-07-12 18:09:15,939 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=69.4 pTM=0.581 ipTM=0.178 tol=3.11 2024-07-12 18:09:22,637 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=70.2 pTM=0.582 ipTM=0.177 tol=6.42 2024-07-12 18:09:29,334 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=70.2 pTM=0.581 ipTM=0.177 tol=4.14 2024-07-12 18:09:36,032 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=70.8 pTM=0.582 ipTM=0.18 tol=1.48 2024-07-12 18:09:42,733 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=69.8 pTM=0.58 ipTM=0.174 tol=2.44 2024-07-12 18:09:49,435 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=70.4 pTM=0.582 ipTM=0.183 tol=1.89 2024-07-12 18:09:56,150 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=69.9 pTM=0.58 ipTM=0.176 tol=3.37 2024-07-12 18:10:02,852 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=70.4 pTM=0.582 ipTM=0.179 tol=8.03 2024-07-12 18:10:09,555 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=70.3 pTM=0.58 ipTM=0.175 tol=6.77 2024-07-12 18:10:16,271 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=70.3 pTM=0.583 ipTM=0.184 tol=1.74 2024-07-12 18:10:22,970 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=70 pTM=0.582 ipTM=0.182 tol=3.48 2024-07-12 18:10:29,674 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=70.4 pTM=0.583 ipTM=0.181 tol=3.87 2024-07-12 18:10:36,385 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=70 pTM=0.582 ipTM=0.178 tol=4.68 2024-07-12 18:10:43,086 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=70 pTM=0.583 ipTM=0.179 tol=3.48 2024-07-12 18:10:49,792 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=70.4 pTM=0.582 ipTM=0.179 tol=2.93 2024-07-12 18:10:56,487 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=70.4 pTM=0.582 ipTM=0.177 tol=4.03 2024-07-12 18:10:56,487 alphafold2_multimer_v3_model_3_seed_000 took 207.5s (30 recycles) 2024-07-12 18:11:03,374 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=70.4 pTM=0.58 ipTM=0.16 2024-07-12 18:11:10,076 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=69.6 pTM=0.58 ipTM=0.158 tol=8.44 2024-07-12 18:11:16,763 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=68.8 pTM=0.573 ipTM=0.136 tol=4.17 2024-07-12 18:11:23,455 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=68.4 pTM=0.577 ipTM=0.15 tol=4.31 2024-07-12 18:11:30,154 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=68.3 pTM=0.581 ipTM=0.161 tol=5.41 2024-07-12 18:11:36,840 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=67.8 pTM=0.578 ipTM=0.156 tol=5.78 2024-07-12 18:11:43,533 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=68.1 pTM=0.583 ipTM=0.173 tol=2.43 2024-07-12 18:11:50,219 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=68 pTM=0.584 ipTM=0.172 tol=3.18 2024-07-12 18:11:56,909 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=68.1 pTM=0.584 ipTM=0.174 tol=2.77 2024-07-12 18:12:03,605 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=67.4 pTM=0.584 ipTM=0.173 tol=3.73 2024-07-12 18:12:10,308 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=68 pTM=0.584 ipTM=0.171 tol=6.45 2024-07-12 18:12:17,006 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=67.2 pTM=0.581 ipTM=0.161 tol=4.89 2024-07-12 18:12:23,708 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=67.4 pTM=0.58 ipTM=0.157 tol=4.68 2024-07-12 18:12:30,429 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=67.5 pTM=0.579 ipTM=0.15 tol=7.27 2024-07-12 18:12:37,144 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=67.6 pTM=0.582 ipTM=0.166 tol=7.12 2024-07-12 18:12:43,850 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=67.2 pTM=0.582 ipTM=0.163 tol=6.23 2024-07-12 18:12:50,545 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=67.2 pTM=0.584 ipTM=0.172 tol=2.99 2024-07-12 18:12:57,244 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=67 pTM=0.584 ipTM=0.174 tol=3.85 2024-07-12 18:13:03,943 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=67.6 pTM=0.586 ipTM=0.182 tol=3.44 2024-07-12 18:13:10,631 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=67.4 pTM=0.583 ipTM=0.171 tol=5.22 2024-07-12 18:13:17,329 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=67.7 pTM=0.584 ipTM=0.178 tol=5.1 2024-07-12 18:13:24,030 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=67.8 pTM=0.585 ipTM=0.177 tol=3.75 2024-07-12 18:13:30,732 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=68 pTM=0.583 ipTM=0.166 tol=4.09 2024-07-12 18:13:37,431 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=67.6 pTM=0.583 ipTM=0.163 tol=5.29 2024-07-12 18:13:44,126 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=67.6 pTM=0.587 ipTM=0.187 tol=3.82 2024-07-12 18:13:50,822 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=67.5 pTM=0.581 ipTM=0.168 tol=4.67 2024-07-12 18:13:57,523 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=67.8 pTM=0.58 ipTM=0.155 tol=6.29 2024-07-12 18:14:04,217 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=67.2 pTM=0.578 ipTM=0.152 tol=5.91 2024-07-12 18:14:10,913 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=67.8 pTM=0.587 ipTM=0.188 tol=3.24 2024-07-12 18:14:17,607 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=67.4 pTM=0.584 ipTM=0.174 tol=3.87 2024-07-12 18:14:24,302 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=68 pTM=0.583 ipTM=0.169 tol=6.53 2024-07-12 18:14:24,303 alphafold2_multimer_v3_model_4_seed_000 took 207.6s (30 recycles) 2024-07-12 18:14:31,181 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=72.5 pTM=0.589 ipTM=0.35 2024-07-12 18:14:37,884 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=72.1 pTM=0.579 ipTM=0.19 tol=9.2 2024-07-12 18:14:44,586 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=72.1 pTM=0.571 ipTM=0.126 tol=6.01 2024-07-12 18:14:51,300 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=71.4 pTM=0.571 ipTM=0.131 tol=3.4 2024-07-12 18:14:58,007 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=71.6 pTM=0.572 ipTM=0.166 tol=6.18 2024-07-12 18:15:04,718 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=71.2 pTM=0.571 ipTM=0.154 tol=3.46 2024-07-12 18:15:11,436 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=71.5 pTM=0.572 ipTM=0.125 tol=3.89 2024-07-12 18:15:18,154 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=71.8 pTM=0.573 ipTM=0.132 tol=2.3 2024-07-12 18:15:24,863 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=71.7 pTM=0.574 ipTM=0.132 tol=3.71 2024-07-12 18:15:31,585 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=71.4 pTM=0.575 ipTM=0.133 tol=3.41 2024-07-12 18:15:38,307 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=71.7 pTM=0.572 ipTM=0.127 tol=2.41 2024-07-12 18:15:45,027 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=71.8 pTM=0.573 ipTM=0.128 tol=2.25 2024-07-12 18:15:51,756 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=71.5 pTM=0.578 ipTM=0.143 tol=2.85 2024-07-12 18:15:58,485 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=71.6 pTM=0.579 ipTM=0.143 tol=1.24 2024-07-12 18:16:05,208 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=71.4 pTM=0.576 ipTM=0.134 tol=2.39 2024-07-12 18:16:11,925 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=71.6 pTM=0.575 ipTM=0.133 tol=0.899 2024-07-12 18:16:18,643 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=71.6 pTM=0.574 ipTM=0.134 tol=2.65 2024-07-12 18:16:25,365 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=71.6 pTM=0.574 ipTM=0.127 tol=4.21 2024-07-12 18:16:32,088 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=71.6 pTM=0.575 ipTM=0.134 tol=4.23 2024-07-12 18:16:38,808 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=71.7 pTM=0.571 ipTM=0.124 tol=2.68 2024-07-12 18:16:45,542 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=72 pTM=0.574 ipTM=0.132 tol=1.89 2024-07-12 18:16:52,273 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=71.7 pTM=0.573 ipTM=0.127 tol=1.33 2024-07-12 18:16:59,002 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=71.6 pTM=0.571 ipTM=0.124 tol=2.47 2024-07-12 18:17:05,728 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=72.1 pTM=0.573 ipTM=0.128 tol=3.14 2024-07-12 18:17:12,450 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=71.7 pTM=0.578 ipTM=0.141 tol=3.53 2024-07-12 18:17:19,175 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=71.7 pTM=0.578 ipTM=0.144 tol=2.33 2024-07-12 18:17:25,896 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=71.4 pTM=0.579 ipTM=0.143 tol=2.02 2024-07-12 18:17:32,621 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=71.2 pTM=0.578 ipTM=0.14 tol=1.94 2024-07-12 18:17:39,345 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=71.3 pTM=0.577 ipTM=0.135 tol=1.54 2024-07-12 18:17:46,083 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=71.4 pTM=0.576 ipTM=0.132 tol=2.04 2024-07-12 18:17:52,839 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=71.3 pTM=0.578 ipTM=0.14 tol=2.12 2024-07-12 18:17:52,840 alphafold2_multimer_v3_model_5_seed_000 took 208.3s (30 recycles) 2024-07-12 18:17:53,045 reranking models by 'multimer' metric 2024-07-12 18:17:53,836 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-12 18:18:34,941 Relaxation took 41.9s 2024-07-12 18:18:34,941 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=70.4 pTM=0.582 ipTM=0.177 2024-07-12 18:19:19,891 Relaxation took 44.9s 2024-07-12 18:19:19,892 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=68 pTM=0.583 ipTM=0.169 2024-07-12 18:19:37,613 Relaxation took 17.7s 2024-07-12 18:19:37,613 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=71.3 pTM=0.578 ipTM=0.14 2024-07-12 18:20:08,822 Relaxation took 31.2s 2024-07-12 18:20:08,822 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=73.9 pTM=0.574 ipTM=0.139 2024-07-12 18:20:28,213 Relaxation took 19.4s 2024-07-12 18:20:28,213 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=75.7 pTM=0.569 ipTM=0.135 2024-07-12 18:20:30,949 Done