2024-07-12 18:07:00,115 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-12 18:07:00,500 Running on GPU 2024-07-12 18:07:09,002 Found 6 citations for tools or databases 2024-07-12 18:07:09,002 Query 1/1: RL26L_GALT5 (length 1085) 2024-07-12 18:07:09,462 Sleeping for 5s. Reason: PENDING 2024-07-12 18:07:14,879 Sleeping for 8s. Reason: RUNNING 2024-07-12 18:07:23,311 Sleeping for 7s. Reason: RUNNING 2024-07-12 18:07:30,732 Sleeping for 7s. Reason: RUNNING 2024-07-12 18:07:38,145 Sleeping for 5s. Reason: RUNNING 2024-07-12 18:07:43,574 Sleeping for 5s. Reason: RUNNING 2024-07-12 18:07:48,993 Sleeping for 10s. Reason: RUNNING 2024-07-12 18:07:59,417 Sleeping for 8s. Reason: RUNNING 2024-07-12 18:08:07,851 Sleeping for 7s. Reason: RUNNING 2024-07-12 18:08:15,277 Sleeping for 7s. Reason: RUNNING 2024-07-12 18:08:22,693 Sleeping for 6s. Reason: RUNNING 2024-07-12 18:08:29,122 Sleeping for 5s. Reason: RUNNING 2024-07-12 18:08:34,558 Sleeping for 10s. Reason: RUNNING 2024-07-12 18:08:44,992 Sleeping for 6s. Reason: RUNNING 2024-07-12 18:08:51,431 Sleeping for 9s. Reason: RUNNING 2024-07-12 18:09:00,857 Sleeping for 9s. Reason: RUNNING 2024-07-12 18:09:10,314 Sleeping for 7s. Reason: RUNNING 2024-07-12 18:09:17,750 Sleeping for 5s. Reason: RUNNING 2024-07-12 18:09:23,203 Sleeping for 7s. Reason: RUNNING 2024-07-12 18:09:30,635 Sleeping for 9s. Reason: RUNNING 2024-07-12 18:09:40,049 Sleeping for 8s. Reason: RUNNING 2024-07-12 18:09:48,485 Sleeping for 8s. Reason: RUNNING 2024-07-12 18:09:56,913 Sleeping for 5s. Reason: RUNNING 2024-07-12 18:10:02,334 Sleeping for 10s. Reason: RUNNING 2024-07-12 18:10:12,758 Sleeping for 7s. Reason: RUNNING 2024-07-12 18:10:20,184 Sleeping for 10s. Reason: RUNNING 2024-07-12 18:10:30,608 Sleeping for 6s. Reason: RUNNING 2024-07-12 18:10:37,024 Sleeping for 5s. Reason: RUNNING 2024-07-12 18:10:42,457 Sleeping for 6s. Reason: RUNNING 2024-07-12 18:10:51,868 Sleeping for 6s. Reason: PENDING 2024-07-12 18:10:58,316 Sleeping for 7s. Reason: RUNNING 2024-07-12 18:11:05,741 Sleeping for 6s. Reason: RUNNING 2024-07-12 18:11:12,182 Sleeping for 9s. Reason: RUNNING 2024-07-12 18:11:21,604 Sleeping for 9s. Reason: RUNNING 2024-07-12 18:11:31,022 Sleeping for 5s. Reason: RUNNING 2024-07-12 18:11:36,455 Sleeping for 10s. Reason: RUNNING 2024-07-12 18:11:46,895 Sleeping for 7s. Reason: RUNNING 2024-07-12 18:11:54,308 Sleeping for 10s. Reason: RUNNING 2024-07-12 18:12:04,735 Sleeping for 5s. Reason: RUNNING 2024-07-12 18:12:10,180 Sleeping for 7s. Reason: RUNNING 2024-07-12 18:12:17,598 Sleeping for 10s. Reason: RUNNING 2024-07-12 18:12:28,042 Sleeping for 5s. Reason: RUNNING 2024-07-12 18:12:33,469 Sleeping for 9s. Reason: RUNNING 2024-07-12 18:12:42,887 Sleeping for 6s. Reason: RUNNING 2024-07-12 18:12:49,314 Sleeping for 7s. Reason: RUNNING 2024-07-12 18:13:00,305 Setting max_seq=508, max_extra_seq=2048 2024-07-12 18:16:47,736 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=58.3 pTM=0.521 ipTM=0.243 2024-07-12 18:17:15,137 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=59.5 pTM=0.536 ipTM=0.279 tol=13 2024-07-12 18:17:42,615 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=59.8 pTM=0.538 ipTM=0.294 tol=10.1 2024-07-12 18:18:10,154 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=60 pTM=0.539 ipTM=0.309 tol=5.89 2024-07-12 18:18:37,756 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=60.1 pTM=0.54 ipTM=0.312 tol=4.57 2024-07-12 18:19:05,408 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=60 pTM=0.54 ipTM=0.312 tol=2.99 2024-07-12 18:19:33,103 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=60 pTM=0.54 ipTM=0.307 tol=2.97 2024-07-12 18:20:00,820 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=60 pTM=0.539 ipTM=0.308 tol=6.29 2024-07-12 18:20:28,536 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=59.9 pTM=0.539 ipTM=0.307 tol=6.05 2024-07-12 18:20:56,279 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=60.1 pTM=0.54 ipTM=0.307 tol=3.81 2024-07-12 18:21:24,016 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60 pTM=0.538 ipTM=0.307 tol=3.21 2024-07-12 18:21:51,752 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=60.2 pTM=0.539 ipTM=0.306 tol=5.97 2024-07-12 18:22:19,499 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=59.9 pTM=0.538 ipTM=0.301 tol=3.32 2024-07-12 18:22:47,240 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=60.1 pTM=0.538 ipTM=0.298 tol=6.43 2024-07-12 18:23:14,975 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.1 pTM=0.539 ipTM=0.301 tol=3.34 2024-07-12 18:23:42,735 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.2 pTM=0.539 ipTM=0.305 tol=2.39 2024-07-12 18:24:10,502 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60.2 pTM=0.541 ipTM=0.317 tol=3.15 2024-07-12 18:24:38,261 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60.1 pTM=0.539 ipTM=0.315 tol=2.42 2024-07-12 18:25:06,022 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=60.1 pTM=0.539 ipTM=0.312 tol=3.61 2024-07-12 18:25:33,814 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=60 pTM=0.54 ipTM=0.312 tol=6.92 2024-07-12 18:26:01,605 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=60.1 pTM=0.54 ipTM=0.314 tol=3.08 2024-07-12 18:26:29,399 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=60.2 pTM=0.54 ipTM=0.318 tol=6.93 2024-07-12 18:26:57,167 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.2 pTM=0.54 ipTM=0.315 tol=4.42 2024-07-12 18:27:24,997 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60.2 pTM=0.539 ipTM=0.305 tol=3.86 2024-07-12 18:27:52,779 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60.2 pTM=0.538 ipTM=0.301 tol=2.94 2024-07-12 18:28:20,552 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.2 pTM=0.54 ipTM=0.308 tol=2 2024-07-12 18:28:48,292 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.2 pTM=0.541 ipTM=0.313 tol=2.98 2024-07-12 18:29:16,016 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=60.3 pTM=0.542 ipTM=0.312 tol=1.91 2024-07-12 18:29:43,734 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=60.1 pTM=0.541 ipTM=0.31 tol=2.65 2024-07-12 18:30:11,468 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.2 pTM=0.541 ipTM=0.304 tol=3.11 2024-07-12 18:30:39,180 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=60 pTM=0.539 ipTM=0.305 tol=4.48 2024-07-12 18:30:39,181 alphafold2_multimer_v3_model_1_seed_000 took 1028.7s (30 recycles) 2024-07-12 18:31:07,622 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=57.8 pTM=0.527 ipTM=0.254 2024-07-12 18:31:35,435 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=59 pTM=0.542 ipTM=0.292 tol=14.9 2024-07-12 18:32:03,227 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=59.4 pTM=0.545 ipTM=0.312 tol=5.88 2024-07-12 18:32:31,040 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=59.9 pTM=0.545 ipTM=0.335 tol=4.91 2024-07-12 18:32:58,828 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=60.3 pTM=0.545 ipTM=0.335 tol=3.91 2024-07-12 18:33:26,659 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=60.6 pTM=0.546 ipTM=0.342 tol=2.46 2024-07-12 18:33:54,440 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=60.5 pTM=0.546 ipTM=0.34 tol=2.24 2024-07-12 18:34:22,232 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=60.6 pTM=0.546 ipTM=0.342 tol=2.12 2024-07-12 18:34:50,041 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=60.6 pTM=0.546 ipTM=0.344 tol=2.33 2024-07-12 18:35:17,808 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=60.7 pTM=0.546 ipTM=0.346 tol=2.13 2024-07-12 18:35:45,559 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=60.8 pTM=0.547 ipTM=0.356 tol=1.99 2024-07-12 18:36:13,305 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=60.8 pTM=0.547 ipTM=0.35 tol=1.52 2024-07-12 18:36:41,037 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=60.8 pTM=0.547 ipTM=0.361 tol=1.11 2024-07-12 18:37:08,774 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=60.9 pTM=0.549 ipTM=0.369 tol=1.13 2024-07-12 18:37:36,490 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=60.8 pTM=0.548 ipTM=0.37 tol=1.09 2024-07-12 18:38:04,199 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=60.9 pTM=0.548 ipTM=0.368 tol=1.68 2024-07-12 18:38:31,917 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=60.8 pTM=0.548 ipTM=0.361 tol=1.63 2024-07-12 18:38:59,633 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=60.8 pTM=0.548 ipTM=0.368 tol=1.53 2024-07-12 18:39:27,341 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=60.8 pTM=0.548 ipTM=0.375 tol=1.18 2024-07-12 18:39:55,058 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=60.8 pTM=0.548 ipTM=0.366 tol=1.57 2024-07-12 18:40:22,781 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=60.9 pTM=0.548 ipTM=0.369 tol=1.67 2024-07-12 18:40:50,503 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=60.8 pTM=0.548 ipTM=0.365 tol=1.35 2024-07-12 18:41:18,232 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=61 pTM=0.55 ipTM=0.375 tol=3.35 2024-07-12 18:41:45,985 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=61 pTM=0.55 ipTM=0.374 tol=1.87 2024-07-12 18:42:13,711 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=60.9 pTM=0.548 ipTM=0.367 tol=1.58 2024-07-12 18:42:41,449 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=60.9 pTM=0.548 ipTM=0.368 tol=1.36 2024-07-12 18:43:09,182 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=60.9 pTM=0.548 ipTM=0.372 tol=3.17 2024-07-12 18:43:36,919 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=61.1 pTM=0.548 ipTM=0.377 tol=3.17 2024-07-12 18:44:04,686 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=60.9 pTM=0.547 ipTM=0.371 tol=3.77 2024-07-12 18:44:32,443 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=60.9 pTM=0.547 ipTM=0.366 tol=1.49 2024-07-12 18:45:00,210 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=60.8 pTM=0.547 ipTM=0.372 tol=1.91 2024-07-12 18:45:00,211 alphafold2_multimer_v3_model_2_seed_000 took 860.3s (30 recycles) 2024-07-12 18:45:28,652 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=58.1 pTM=0.519 ipTM=0.243 2024-07-12 18:45:56,464 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=58.2 pTM=0.531 ipTM=0.274 tol=12.5 2024-07-12 18:46:24,294 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=58.4 pTM=0.533 ipTM=0.278 tol=9.74 2024-07-12 18:46:52,133 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=58.2 pTM=0.539 ipTM=0.326 tol=7.43 2024-07-12 18:47:19,998 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=58.7 pTM=0.54 ipTM=0.327 tol=3.77 2024-07-12 18:47:47,842 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=59.4 pTM=0.543 ipTM=0.369 tol=3.57 2024-07-12 18:48:15,712 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=59.7 pTM=0.544 ipTM=0.381 tol=2.77 2024-07-12 18:48:43,574 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=60 pTM=0.545 ipTM=0.399 tol=2.46 2024-07-12 18:49:11,427 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=59.9 pTM=0.545 ipTM=0.413 tol=1.97 2024-07-12 18:49:39,282 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=60.2 pTM=0.546 ipTM=0.424 tol=1.97 2024-07-12 18:50:07,120 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=60.3 pTM=0.546 ipTM=0.425 tol=1.31 2024-07-12 18:50:34,969 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=59.5 pTM=0.546 ipTM=0.429 tol=18.4 2024-07-12 18:51:02,815 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=60 pTM=0.546 ipTM=0.421 tol=18.1 2024-07-12 18:51:30,662 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=60.3 pTM=0.545 ipTM=0.421 tol=5.62 2024-07-12 18:51:58,514 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=60.2 pTM=0.545 ipTM=0.434 tol=2.8 2024-07-12 18:52:26,364 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=60.3 pTM=0.545 ipTM=0.431 tol=2.04 2024-07-12 18:52:54,230 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=60.4 pTM=0.547 ipTM=0.436 tol=2.1 2024-07-12 18:53:22,107 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=60.4 pTM=0.546 ipTM=0.436 tol=2.35 2024-07-12 18:53:49,935 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=60.3 pTM=0.546 ipTM=0.434 tol=4.68 2024-07-12 18:54:17,766 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=60.3 pTM=0.546 ipTM=0.435 tol=3.31 2024-07-12 18:54:45,604 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=60.5 pTM=0.546 ipTM=0.441 tol=3.81 2024-07-12 18:55:13,461 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=60.5 pTM=0.546 ipTM=0.435 tol=5.84 2024-07-12 18:55:41,327 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=60.4 pTM=0.546 ipTM=0.438 tol=3.19 2024-07-12 18:56:09,170 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=60.5 pTM=0.546 ipTM=0.442 tol=5.95 2024-07-12 18:56:37,017 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=60.6 pTM=0.545 ipTM=0.44 tol=4.51 2024-07-12 18:57:04,865 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=60.7 pTM=0.547 ipTM=0.444 tol=3.49 2024-07-12 18:57:32,720 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=60.5 pTM=0.546 ipTM=0.441 tol=2.54 2024-07-12 18:58:00,555 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=60.6 pTM=0.547 ipTM=0.447 tol=2.77 2024-07-12 18:58:28,393 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=60.6 pTM=0.546 ipTM=0.446 tol=1.85 2024-07-12 18:58:56,227 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=60.7 pTM=0.548 ipTM=0.451 tol=2.4 2024-07-12 18:59:24,088 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.5 pTM=0.545 ipTM=0.45 tol=2.08 2024-07-12 18:59:24,089 alphafold2_multimer_v3_model_3_seed_000 took 863.2s (30 recycles) 2024-07-12 18:59:52,557 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=56.3 pTM=0.529 ipTM=0.31 2024-07-12 19:00:20,366 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=57.2 pTM=0.54 ipTM=0.321 tol=10.8 2024-07-12 19:00:48,177 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=57 pTM=0.542 ipTM=0.333 tol=7.46 2024-07-12 19:01:16,001 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=57 pTM=0.54 ipTM=0.32 tol=4.74 2024-07-12 19:01:43,840 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=57 pTM=0.542 ipTM=0.321 tol=2.56 2024-07-12 19:02:11,673 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=57 pTM=0.542 ipTM=0.328 tol=2.03 2024-07-12 19:02:39,509 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=56.9 pTM=0.542 ipTM=0.328 tol=2.11 2024-07-12 19:03:07,342 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=56.8 pTM=0.542 ipTM=0.33 tol=2.09 2024-07-12 19:03:35,185 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=56.7 pTM=0.542 ipTM=0.332 tol=2.26 2024-07-12 19:04:03,028 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=56.8 pTM=0.542 ipTM=0.327 tol=2.45 2024-07-12 19:04:30,883 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=56.8 pTM=0.542 ipTM=0.338 tol=2.79 2024-07-12 19:04:58,714 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=56.8 pTM=0.542 ipTM=0.334 tol=3.06 2024-07-12 19:05:26,560 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=56.8 pTM=0.542 ipTM=0.333 tol=2.75 2024-07-12 19:05:54,397 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=56.7 pTM=0.543 ipTM=0.34 tol=2.35 2024-07-12 19:06:22,251 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=56.8 pTM=0.543 ipTM=0.341 tol=2.09 2024-07-12 19:06:50,107 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=56.8 pTM=0.543 ipTM=0.343 tol=1.83 2024-07-12 19:07:17,940 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=56.9 pTM=0.544 ipTM=0.343 tol=2.03 2024-07-12 19:07:45,774 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=56.7 pTM=0.545 ipTM=0.344 tol=3.13 2024-07-12 19:08:13,615 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=56.8 pTM=0.546 ipTM=0.345 tol=3.18 2024-07-12 19:08:41,455 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=57 pTM=0.55 ipTM=0.37 tol=3.69 2024-07-12 19:09:09,296 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=57.5 pTM=0.551 ipTM=0.371 tol=3.7 2024-07-12 19:09:37,141 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=57.2 pTM=0.551 ipTM=0.365 tol=3.56 2024-07-12 19:10:04,985 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=57.3 pTM=0.551 ipTM=0.37 tol=3.04 2024-07-12 19:10:32,807 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=57.4 pTM=0.551 ipTM=0.374 tol=3.82 2024-07-12 19:11:00,617 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=57.4 pTM=0.55 ipTM=0.365 tol=4.55 2024-07-12 19:11:28,437 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=57.1 pTM=0.551 ipTM=0.37 tol=4.37 2024-07-12 19:11:56,243 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=57.1 pTM=0.552 ipTM=0.368 tol=3.04 2024-07-12 19:12:24,058 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=57.3 pTM=0.552 ipTM=0.374 tol=2.92 2024-07-12 19:12:51,866 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=57.3 pTM=0.552 ipTM=0.37 tol=2.41 2024-07-12 19:13:19,662 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=57.4 pTM=0.552 ipTM=0.37 tol=1.58 2024-07-12 19:13:47,451 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=57.3 pTM=0.552 ipTM=0.367 tol=2.03 2024-07-12 19:13:47,452 alphafold2_multimer_v3_model_4_seed_000 took 862.6s (30 recycles) 2024-07-12 19:14:15,874 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=56.8 pTM=0.528 ipTM=0.293 2024-07-12 19:14:43,666 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=58.5 pTM=0.537 ipTM=0.293 tol=12.4 2024-07-12 19:15:11,469 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=58.6 pTM=0.539 ipTM=0.303 tol=8.07 2024-07-12 19:15:39,284 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=58.5 pTM=0.539 ipTM=0.303 tol=7.09 2024-07-12 19:16:07,125 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=58.7 pTM=0.54 ipTM=0.307 tol=4.33 2024-07-12 19:16:34,987 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=58.8 pTM=0.541 ipTM=0.319 tol=4.23 2024-07-12 19:17:02,862 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=58.8 pTM=0.541 ipTM=0.312 tol=3.63 2024-07-12 19:17:30,727 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=58.8 pTM=0.541 ipTM=0.314 tol=7.73 2024-07-12 19:17:58,594 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=58.5 pTM=0.54 ipTM=0.31 tol=5.99 2024-07-12 19:18:26,492 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=58.6 pTM=0.541 ipTM=0.313 tol=2.73 2024-07-12 19:18:54,377 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=58.6 pTM=0.541 ipTM=0.315 tol=3.38 2024-07-12 19:19:22,278 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=58.7 pTM=0.542 ipTM=0.315 tol=4.58 2024-07-12 19:19:50,186 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=58.6 pTM=0.541 ipTM=0.311 tol=4.72 2024-07-12 19:20:18,073 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=58.8 pTM=0.541 ipTM=0.315 tol=3.35 2024-07-12 19:20:45,968 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=58.7 pTM=0.541 ipTM=0.314 tol=6.83 2024-07-12 19:21:13,856 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=58.9 pTM=0.541 ipTM=0.314 tol=3.11 2024-07-12 19:21:41,748 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=58.7 pTM=0.541 ipTM=0.311 tol=6.53 2024-07-12 19:22:09,642 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=58.6 pTM=0.54 ipTM=0.309 tol=5.48 2024-07-12 19:22:37,527 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=58.7 pTM=0.54 ipTM=0.309 tol=4.83 2024-07-12 19:23:05,430 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=58.6 pTM=0.541 ipTM=0.314 tol=6.44 2024-07-12 19:23:33,328 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=58.7 pTM=0.542 ipTM=0.315 tol=9.52 2024-07-12 19:24:01,211 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=58.6 pTM=0.541 ipTM=0.315 tol=3.96 2024-07-12 19:24:29,081 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=58.8 pTM=0.542 ipTM=0.318 tol=10.5 2024-07-12 19:24:56,957 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=58.9 pTM=0.541 ipTM=0.313 tol=5.31 2024-07-12 19:25:24,832 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=58.8 pTM=0.541 ipTM=0.311 tol=8.41 2024-07-12 19:25:52,723 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=58.7 pTM=0.541 ipTM=0.312 tol=9.95 2024-07-12 19:26:20,606 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=58.6 pTM=0.542 ipTM=0.314 tol=5.36 2024-07-12 19:26:48,464 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=58.9 pTM=0.541 ipTM=0.312 tol=2.77 2024-07-12 19:27:16,338 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=58.8 pTM=0.541 ipTM=0.312 tol=2.7 2024-07-12 19:27:44,216 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=59.1 pTM=0.541 ipTM=0.315 tol=2.92 2024-07-12 19:28:12,099 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=58.8 pTM=0.541 ipTM=0.314 tol=3.17 2024-07-12 19:28:12,100 alphafold2_multimer_v3_model_5_seed_000 took 863.9s (30 recycles) 2024-07-12 19:28:12,817 reranking models by 'multimer' metric 2024-07-12 19:28:29,915 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-12 19:30:19,598 Relaxation took 126.8s 2024-07-12 19:30:19,598 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.5 pTM=0.545 ipTM=0.45 2024-07-12 19:31:44,145 Relaxation took 84.5s 2024-07-12 19:31:44,145 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=60.8 pTM=0.547 ipTM=0.372 2024-07-12 19:34:31,032 Relaxation took 166.9s 2024-07-12 19:34:31,033 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=57.3 pTM=0.552 ipTM=0.367 2024-07-12 19:35:55,049 Relaxation took 84.0s 2024-07-12 19:35:55,049 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=58.8 pTM=0.541 ipTM=0.314 2024-07-12 19:38:17,830 Relaxation took 142.8s 2024-07-12 19:38:17,830 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=60 pTM=0.539 ipTM=0.305 2024-07-12 19:38:22,303 Done