2024-07-12 18:23:01,844 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 18:23:02,176 Running on GPU
2024-07-12 18:23:14,478 Found 6 citations for tools or databases
2024-07-12 18:23:14,478 Query 1/1: RM51_RM03 (length 476)
2024-07-12 18:23:14,920 Sleeping for 8s. Reason: PENDING
2024-07-12 18:23:23,356 Sleeping for 7s. Reason: RUNNING
2024-07-12 18:23:30,779 Sleeping for 6s. Reason: RUNNING
2024-07-12 18:23:37,180 Sleeping for 9s. Reason: RUNNING
2024-07-12 18:23:46,597 Sleeping for 6s. Reason: RUNNING
2024-07-12 18:23:53,018 Sleeping for 10s. Reason: RUNNING
2024-07-12 18:24:03,453 Sleeping for 6s. Reason: RUNNING
2024-07-12 18:24:11,465 Sleeping for 5s. Reason: PENDING
2024-07-12 18:24:16,886 Sleeping for 8s. Reason: RUNNING
2024-07-12 18:24:25,304 Sleeping for 9s. Reason: RUNNING
2024-07-12 18:24:34,721 Sleeping for 10s. Reason: RUNNING
2024-07-12 18:24:47,156 Setting max_seq=508, max_extra_seq=2048
2024-07-12 18:27:39,936 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=64.1 pTM=0.55 ipTM=0.107
2024-07-12 18:27:45,018 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.3 pTM=0.55 ipTM=0.108 tol=3.5
2024-07-12 18:27:50,104 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=64.7 pTM=0.551 ipTM=0.109 tol=3.59
2024-07-12 18:27:55,186 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=65.5 pTM=0.548 ipTM=0.11 tol=3.37
2024-07-12 18:28:00,272 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=66 pTM=0.555 ipTM=0.114 tol=2.99
2024-07-12 18:28:05,355 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66.1 pTM=0.552 ipTM=0.117 tol=2.43
2024-07-12 18:28:10,439 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=66.6 pTM=0.553 ipTM=0.116 tol=2.56
2024-07-12 18:28:15,524 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=66.9 pTM=0.554 ipTM=0.113 tol=1.76
2024-07-12 18:28:20,612 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.1 pTM=0.554 ipTM=0.114 tol=1.7
2024-07-12 18:28:25,695 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=66.6 pTM=0.55 ipTM=0.117 tol=2.69
2024-07-12 18:28:30,783 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=66.9 pTM=0.556 ipTM=0.117 tol=1.73
2024-07-12 18:28:35,865 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66.6 pTM=0.551 ipTM=0.12 tol=1.18
2024-07-12 18:28:40,951 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=66.2 pTM=0.552 ipTM=0.121 tol=1.11
2024-07-12 18:28:46,034 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=66.2 pTM=0.552 ipTM=0.119 tol=1.32
2024-07-12 18:28:51,119 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=66.2 pTM=0.553 ipTM=0.124 tol=2.18
2024-07-12 18:28:56,209 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=66.4 pTM=0.554 ipTM=0.117 tol=2.24
2024-07-12 18:29:01,296 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=66.4 pTM=0.554 ipTM=0.114 tol=1.46
2024-07-12 18:29:06,386 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=66.3 pTM=0.554 ipTM=0.115 tol=0.716
2024-07-12 18:29:11,470 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=66.1 pTM=0.552 ipTM=0.115 tol=0.798
2024-07-12 18:29:16,557 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=66.1 pTM=0.55 ipTM=0.117 tol=0.938
2024-07-12 18:29:21,645 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=66.4 pTM=0.559 ipTM=0.118 tol=2.34
2024-07-12 18:29:26,734 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.4 pTM=0.55 ipTM=0.115 tol=1.99
2024-07-12 18:29:31,823 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=66.6 pTM=0.551 ipTM=0.117 tol=1.22
2024-07-12 18:29:36,913 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66.6 pTM=0.552 ipTM=0.118 tol=1.33
2024-07-12 18:29:41,996 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=66.4 pTM=0.55 ipTM=0.116 tol=0.97
2024-07-12 18:29:47,083 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=66.6 pTM=0.554 ipTM=0.119 tol=1.5
2024-07-12 18:29:52,170 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=66.8 pTM=0.554 ipTM=0.118 tol=1.08
2024-07-12 18:29:57,259 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=66.6 pTM=0.55 ipTM=0.115 tol=2.37
2024-07-12 18:30:02,350 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=65.9 pTM=0.553 ipTM=0.116 tol=2.12
2024-07-12 18:30:07,440 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.2 pTM=0.55 ipTM=0.112 tol=1.3
2024-07-12 18:30:12,531 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=66 pTM=0.552 ipTM=0.116 tol=1.41
2024-07-12 18:30:12,531 alphafold2_multimer_v3_model_1_seed_000 took 283.6s (30 recycles)
2024-07-12 18:30:17,786 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=63.2 pTM=0.53 ipTM=0.101
2024-07-12 18:30:22,885 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=62.8 pTM=0.531 ipTM=0.11 tol=7.57
2024-07-12 18:30:27,983 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=63.8 pTM=0.539 ipTM=0.121 tol=3
2024-07-12 18:30:33,077 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=63.9 pTM=0.54 ipTM=0.126 tol=2.83
2024-07-12 18:30:38,172 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=64.4 pTM=0.54 ipTM=0.112 tol=3.75
2024-07-12 18:30:43,267 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=63.8 pTM=0.541 ipTM=0.115 tol=2.29
2024-07-12 18:30:48,367 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=63.8 pTM=0.535 ipTM=0.104 tol=2.57
2024-07-12 18:30:53,462 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=64.9 pTM=0.545 ipTM=0.117 tol=3.52
2024-07-12 18:30:58,559 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=63.9 pTM=0.542 ipTM=0.119 tol=2.26
2024-07-12 18:31:03,650 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=63.7 pTM=0.537 ipTM=0.108 tol=3.21
2024-07-12 18:31:08,749 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=64.6 pTM=0.54 ipTM=0.107 tol=3.18
2024-07-12 18:31:13,843 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=63.8 pTM=0.539 ipTM=0.115 tol=2.6
2024-07-12 18:31:18,939 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=63.5 pTM=0.532 ipTM=0.106 tol=3.76
2024-07-12 18:31:24,032 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=63.9 pTM=0.536 ipTM=0.105 tol=1.92
2024-07-12 18:31:29,132 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=63.8 pTM=0.533 ipTM=0.104 tol=3.05
2024-07-12 18:31:34,228 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=64.1 pTM=0.532 ipTM=0.102 tol=3.12
2024-07-12 18:31:39,321 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=63.6 pTM=0.534 ipTM=0.11 tol=4.86
2024-07-12 18:31:44,417 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=63.9 pTM=0.54 ipTM=0.115 tol=3.01
2024-07-12 18:31:49,511 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64 pTM=0.537 ipTM=0.11 tol=3.69
2024-07-12 18:31:54,606 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=63.8 pTM=0.53 ipTM=0.104 tol=2.77
2024-07-12 18:31:59,700 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=63.7 pTM=0.542 ipTM=0.117 tol=2.64
2024-07-12 18:32:04,792 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=64 pTM=0.537 ipTM=0.106 tol=2.38
2024-07-12 18:32:09,892 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=64.4 pTM=0.538 ipTM=0.106 tol=2.56
2024-07-12 18:32:14,985 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=63.8 pTM=0.538 ipTM=0.112 tol=3
2024-07-12 18:32:20,080 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=63.8 pTM=0.538 ipTM=0.114 tol=2.05
2024-07-12 18:32:25,173 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=64.1 pTM=0.542 ipTM=0.112 tol=2.3
2024-07-12 18:32:30,268 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=63.7 pTM=0.536 ipTM=0.108 tol=2.62
2024-07-12 18:32:35,360 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=63.4 pTM=0.532 ipTM=0.112 tol=3.83
2024-07-12 18:32:40,456 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=63.2 pTM=0.532 ipTM=0.109 tol=3.62
2024-07-12 18:32:45,551 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=64 pTM=0.537 ipTM=0.111 tol=2
2024-07-12 18:32:50,647 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=64.4 pTM=0.543 ipTM=0.118 tol=2.25
2024-07-12 18:32:50,648 alphafold2_multimer_v3_model_2_seed_000 took 158.0s (30 recycles)
2024-07-12 18:32:55,910 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=62.9 pTM=0.545 ipTM=0.106
2024-07-12 18:33:01,008 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=62.8 pTM=0.536 ipTM=0.104 tol=7.31
2024-07-12 18:33:06,111 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=63.1 pTM=0.537 ipTM=0.104 tol=3.37
2024-07-12 18:33:11,213 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=63.7 pTM=0.539 ipTM=0.109 tol=2.77
2024-07-12 18:33:16,317 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=63.7 pTM=0.544 ipTM=0.111 tol=1.43
2024-07-12 18:33:21,417 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=64.6 pTM=0.543 ipTM=0.113 tol=2.72
2024-07-12 18:33:26,522 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=64.8 pTM=0.544 ipTM=0.111 tol=1.88
2024-07-12 18:33:31,621 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=65 pTM=0.544 ipTM=0.107 tol=1.94
2024-07-12 18:33:36,721 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=64.6 pTM=0.546 ipTM=0.109 tol=1.16
2024-07-12 18:33:41,819 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=64.2 pTM=0.542 ipTM=0.112 tol=1.78
2024-07-12 18:33:46,920 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=64.6 pTM=0.542 ipTM=0.111 tol=1.63
2024-07-12 18:33:52,015 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=64.4 pTM=0.538 ipTM=0.112 tol=2.16
2024-07-12 18:33:57,114 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=64.1 pTM=0.539 ipTM=0.113 tol=3.2
2024-07-12 18:34:02,209 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=64.8 pTM=0.545 ipTM=0.116 tol=1.29
2024-07-12 18:34:07,307 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=64.5 pTM=0.544 ipTM=0.119 tol=1.69
2024-07-12 18:34:12,402 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=64.5 pTM=0.543 ipTM=0.114 tol=1.71
2024-07-12 18:34:17,501 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=63.9 pTM=0.54 ipTM=0.112 tol=1.5
2024-07-12 18:34:22,598 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=63.9 pTM=0.54 ipTM=0.11 tol=1.94
2024-07-12 18:34:27,700 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=64.1 pTM=0.541 ipTM=0.108 tol=3.11
2024-07-12 18:34:32,799 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=63.7 pTM=0.537 ipTM=0.106 tol=2.5
2024-07-12 18:34:37,903 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=63.1 pTM=0.54 ipTM=0.11 tol=2.61
2024-07-12 18:34:42,999 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=63.6 pTM=0.542 ipTM=0.115 tol=2.13
2024-07-12 18:34:48,100 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=63.9 pTM=0.537 ipTM=0.11 tol=2.24
2024-07-12 18:34:53,200 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=63.3 pTM=0.538 ipTM=0.108 tol=1.91
2024-07-12 18:34:58,303 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=63.3 pTM=0.535 ipTM=0.108 tol=2.51
2024-07-12 18:35:03,403 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=64.1 pTM=0.543 ipTM=0.11 tol=2.64
2024-07-12 18:35:08,502 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=64.1 pTM=0.541 ipTM=0.109 tol=3.15
2024-07-12 18:35:13,600 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=63.6 pTM=0.536 ipTM=0.108 tol=2.38
2024-07-12 18:35:18,701 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=63.1 pTM=0.536 ipTM=0.107 tol=1.81
2024-07-12 18:35:23,801 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=63.8 pTM=0.537 ipTM=0.11 tol=1.77
2024-07-12 18:35:28,902 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=64.1 pTM=0.542 ipTM=0.111 tol=1.9
2024-07-12 18:35:28,903 alphafold2_multimer_v3_model_3_seed_000 took 158.1s (30 recycles)
2024-07-12 18:35:34,176 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=62.1 pTM=0.529 ipTM=0.101
2024-07-12 18:35:39,285 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=61 pTM=0.527 ipTM=0.111 tol=6.67
2024-07-12 18:35:44,392 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=60.6 pTM=0.529 ipTM=0.116 tol=5
2024-07-12 18:35:49,497 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=61 pTM=0.526 ipTM=0.11 tol=3.89
2024-07-12 18:35:54,601 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=61.4 pTM=0.534 ipTM=0.122 tol=5.5
2024-07-12 18:35:59,705 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=62.7 pTM=0.528 ipTM=0.106 tol=5.72
2024-07-12 18:36:04,812 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=62.7 pTM=0.537 ipTM=0.113 tol=4.59
2024-07-12 18:36:09,916 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=63.8 pTM=0.532 ipTM=0.104 tol=5.07
2024-07-12 18:36:15,023 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=62.6 pTM=0.533 ipTM=0.114 tol=5.25
2024-07-12 18:36:20,130 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=62.4 pTM=0.529 ipTM=0.106 tol=4.02
2024-07-12 18:36:25,230 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=62.2 pTM=0.531 ipTM=0.115 tol=3.13
2024-07-12 18:36:30,337 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=62.4 pTM=0.529 ipTM=0.108 tol=3.39
2024-07-12 18:36:35,439 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=61.6 pTM=0.528 ipTM=0.112 tol=3.63
2024-07-12 18:36:40,550 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=62.6 pTM=0.534 ipTM=0.106 tol=2.84
2024-07-12 18:36:45,656 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=62.2 pTM=0.531 ipTM=0.108 tol=3.4
2024-07-12 18:36:50,765 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=62.4 pTM=0.532 ipTM=0.108 tol=2.74
2024-07-12 18:36:55,872 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=61.6 pTM=0.529 ipTM=0.109 tol=3.28
2024-07-12 18:37:00,980 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=62.3 pTM=0.531 ipTM=0.106 tol=3.39
2024-07-12 18:37:06,091 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=62.5 pTM=0.533 ipTM=0.111 tol=4.48
2024-07-12 18:37:11,198 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=62.2 pTM=0.529 ipTM=0.105 tol=4.61
2024-07-12 18:37:16,304 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=61.8 pTM=0.534 ipTM=0.116 tol=5.24
2024-07-12 18:37:21,413 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=63.1 pTM=0.532 ipTM=0.105 tol=5.81
2024-07-12 18:37:26,519 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=62.6 pTM=0.528 ipTM=0.108 tol=3.73
2024-07-12 18:37:31,625 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=62.2 pTM=0.528 ipTM=0.104 tol=2.67
2024-07-12 18:37:36,732 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=62.9 pTM=0.529 ipTM=0.106 tol=4.23
2024-07-12 18:37:41,840 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=62.8 pTM=0.532 ipTM=0.104 tol=3.49
2024-07-12 18:37:46,949 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=62.7 pTM=0.53 ipTM=0.104 tol=3.14
2024-07-12 18:37:52,054 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=62.3 pTM=0.527 ipTM=0.101 tol=2.61
2024-07-12 18:37:57,164 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=61.7 pTM=0.537 ipTM=0.116 tol=4.88
2024-07-12 18:38:02,271 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=62.1 pTM=0.529 ipTM=0.106 tol=4.35
2024-07-12 18:38:07,379 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=62.7 pTM=0.529 ipTM=0.107 tol=4.04
2024-07-12 18:38:07,379 alphafold2_multimer_v3_model_4_seed_000 took 158.3s (30 recycles)
2024-07-12 18:38:14,628 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=61.9 pTM=0.548 ipTM=0.156
2024-07-12 18:38:19,724 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=61.3 pTM=0.534 ipTM=0.117 tol=4.12
2024-07-12 18:38:24,822 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=60.9 pTM=0.535 ipTM=0.111 tol=4.88
2024-07-12 18:38:29,922 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=62.5 pTM=0.537 ipTM=0.104 tol=4.9
2024-07-12 18:38:35,026 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=62.3 pTM=0.542 ipTM=0.103 tol=2.6
2024-07-12 18:38:40,127 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=63.7 pTM=0.538 ipTM=0.0981 tol=3.79
2024-07-12 18:38:45,229 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=64 pTM=0.544 ipTM=0.0997 tol=1.9
2024-07-12 18:38:50,327 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=64.5 pTM=0.539 ipTM=0.098 tol=4.59
2024-07-12 18:38:55,426 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=63.9 pTM=0.542 ipTM=0.104 tol=2.5
2024-07-12 18:39:00,522 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=64.1 pTM=0.541 ipTM=0.105 tol=4.47
2024-07-12 18:39:05,618 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=64.2 pTM=0.542 ipTM=0.104 tol=2.6
2024-07-12 18:39:10,715 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=64.3 pTM=0.538 ipTM=0.106 tol=1.01
2024-07-12 18:39:15,812 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=63.7 pTM=0.539 ipTM=0.105 tol=1.94
2024-07-12 18:39:20,911 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=64.7 pTM=0.546 ipTM=0.108 tol=2.68
2024-07-12 18:39:26,006 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=63.6 pTM=0.542 ipTM=0.111 tol=3.11
2024-07-12 18:39:31,101 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=64 pTM=0.542 ipTM=0.108 tol=0.654
2024-07-12 18:39:36,198 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=63.6 pTM=0.54 ipTM=0.107 tol=2.03
2024-07-12 18:39:41,292 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=63.6 pTM=0.541 ipTM=0.109 tol=1.55
2024-07-12 18:39:46,389 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=64.2 pTM=0.544 ipTM=0.109 tol=1.46
2024-07-12 18:39:51,478 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=63.4 pTM=0.54 ipTM=0.107 tol=0.987
2024-07-12 18:39:56,577 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=62.9 pTM=0.542 ipTM=0.107 tol=1.94
2024-07-12 18:40:01,667 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=64 pTM=0.543 ipTM=0.107 tol=1.08
2024-07-12 18:40:06,763 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=63.8 pTM=0.543 ipTM=0.108 tol=1.08
2024-07-12 18:40:11,852 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=63.2 pTM=0.538 ipTM=0.106 tol=1.45
2024-07-12 18:40:16,954 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=63.8 pTM=0.542 ipTM=0.106 tol=2.44
2024-07-12 18:40:22,052 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=64 pTM=0.545 ipTM=0.107 tol=2.06
2024-07-12 18:40:27,149 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=64.7 pTM=0.546 ipTM=0.108 tol=1.33
2024-07-12 18:40:32,244 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=64 pTM=0.539 ipTM=0.106 tol=3.02
2024-07-12 18:40:37,342 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=63.2 pTM=0.543 ipTM=0.108 tol=2.48
2024-07-12 18:40:42,441 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=64.2 pTM=0.543 ipTM=0.108 tol=1.45
2024-07-12 18:40:47,540 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=64.9 pTM=0.546 ipTM=0.112 tol=2.5
2024-07-12 18:40:47,541 alphafold2_multimer_v3_model_5_seed_000 took 158.0s (30 recycles)
2024-07-12 18:40:47,699 reranking models by 'multimer' metric
2024-07-12 18:41:01,625 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 18:41:34,242 Relaxation took 46.5s
2024-07-12 18:41:34,242 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=64.4 pTM=0.543 ipTM=0.118
2024-07-12 18:41:44,812 Relaxation took 10.6s
2024-07-12 18:41:44,812 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=66 pTM=0.552 ipTM=0.116
2024-07-12 18:41:55,817 Relaxation took 11.0s
2024-07-12 18:41:55,817 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=64.9 pTM=0.546 ipTM=0.112
2024-07-12 18:42:06,016 Relaxation took 10.2s
2024-07-12 18:42:06,016 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=64.1 pTM=0.542 ipTM=0.111
2024-07-12 18:42:25,492 Relaxation took 19.5s
2024-07-12 18:42:25,492 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=62.7 pTM=0.529 ipTM=0.107
2024-07-12 18:42:26,473 Done