2024-07-12 18:37:54,370 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 18:37:54,679 Running on GPU
2024-07-12 18:38:06,214 Found 6 citations for tools or databases
2024-07-12 18:38:06,214 Query 1/1: RN122_STPG2 (length 614)
2024-07-12 18:38:06,750 Sleeping for 8s. Reason: PENDING
2024-07-12 18:38:15,160 Sleeping for 5s. Reason: RUNNING
2024-07-12 18:38:20,582 Sleeping for 8s. Reason: RUNNING
2024-07-12 18:38:29,017 Sleeping for 7s. Reason: RUNNING
2024-07-12 18:38:36,436 Sleeping for 6s. Reason: RUNNING
2024-07-12 18:38:42,851 Sleeping for 6s. Reason: RUNNING
2024-07-12 18:38:49,293 Sleeping for 10s. Reason: RUNNING
2024-07-12 18:38:59,718 Sleeping for 5s. Reason: RUNNING
2024-07-12 18:39:06,755 Sleeping for 5s. Reason: PENDING
2024-07-12 18:39:12,185 Sleeping for 9s. Reason: RUNNING
2024-07-12 18:39:21,614 Sleeping for 8s. Reason: RUNNING
2024-07-12 18:39:33,613 Setting max_seq=508, max_extra_seq=2048
2024-07-12 18:43:03,958 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=35.9 pTM=0.221 ipTM=0.162
2024-07-12 18:43:11,909 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=36 pTM=0.217 ipTM=0.125 tol=20
2024-07-12 18:43:19,850 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=35.9 pTM=0.22 ipTM=0.118 tol=8.25
2024-07-12 18:43:27,806 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=36.2 pTM=0.224 ipTM=0.129 tol=7.8
2024-07-12 18:43:35,773 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=36.5 pTM=0.221 ipTM=0.124 tol=6.63
2024-07-12 18:43:43,756 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=36.4 pTM=0.22 ipTM=0.126 tol=7.42
2024-07-12 18:43:51,740 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=36.8 pTM=0.22 ipTM=0.126 tol=5.2
2024-07-12 18:43:59,731 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=36.8 pTM=0.22 ipTM=0.126 tol=6.7
2024-07-12 18:44:07,723 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=37.1 pTM=0.219 ipTM=0.125 tol=2.85
2024-07-12 18:44:15,721 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=37 pTM=0.219 ipTM=0.129 tol=3.59
2024-07-12 18:44:23,730 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=36.4 pTM=0.218 ipTM=0.131 tol=3.94
2024-07-12 18:44:31,734 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=37.1 pTM=0.223 ipTM=0.128 tol=3.88
2024-07-12 18:44:39,753 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=36.4 pTM=0.219 ipTM=0.127 tol=3.77
2024-07-12 18:44:47,768 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=36.9 pTM=0.221 ipTM=0.131 tol=3.24
2024-07-12 18:44:55,793 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=36.7 pTM=0.219 ipTM=0.128 tol=3.75
2024-07-12 18:45:03,817 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=37.2 pTM=0.223 ipTM=0.135 tol=3.93
2024-07-12 18:45:11,853 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=37 pTM=0.222 ipTM=0.137 tol=2.66
2024-07-12 18:45:19,874 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=37.3 pTM=0.221 ipTM=0.134 tol=2.96
2024-07-12 18:45:27,915 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=37.5 pTM=0.219 ipTM=0.133 tol=2.07
2024-07-12 18:45:35,948 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=37.3 pTM=0.221 ipTM=0.142 tol=2.05
2024-07-12 18:45:43,984 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=37.3 pTM=0.219 ipTM=0.131 tol=2.6
2024-07-12 18:45:52,016 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=37.4 pTM=0.218 ipTM=0.128 tol=2.29
2024-07-12 18:46:00,053 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=37.6 pTM=0.22 ipTM=0.128 tol=2.88
2024-07-12 18:46:08,092 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=37.7 pTM=0.22 ipTM=0.128 tol=2.88
2024-07-12 18:46:16,135 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=37.4 pTM=0.222 ipTM=0.131 tol=2.75
2024-07-12 18:46:24,172 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=37.8 pTM=0.222 ipTM=0.13 tol=3.76
2024-07-12 18:46:32,212 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=37.7 pTM=0.22 ipTM=0.127 tol=4.67
2024-07-12 18:46:40,253 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=37.8 pTM=0.22 ipTM=0.125 tol=2.68
2024-07-12 18:46:48,303 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=37.3 pTM=0.22 ipTM=0.125 tol=6.32
2024-07-12 18:46:56,347 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=37.5 pTM=0.218 ipTM=0.126 tol=4.74
2024-07-12 18:47:04,392 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=37 pTM=0.217 ipTM=0.135 tol=3.85
2024-07-12 18:47:04,393 alphafold2_multimer_v3_model_1_seed_000 took 391.3s (30 recycles)
2024-07-12 18:47:12,656 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=34 pTM=0.234 ipTM=0.157
2024-07-12 18:47:20,697 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=34.5 pTM=0.225 ipTM=0.115 tol=21.9
2024-07-12 18:47:28,742 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=35.6 pTM=0.224 ipTM=0.115 tol=14.7
2024-07-12 18:47:36,781 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=35.9 pTM=0.224 ipTM=0.103 tol=13.5
2024-07-12 18:47:44,829 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=35.9 pTM=0.224 ipTM=0.121 tol=9.84
2024-07-12 18:47:52,881 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=35.7 pTM=0.221 ipTM=0.13 tol=8.24
2024-07-12 18:48:00,939 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=36.3 pTM=0.221 ipTM=0.134 tol=6.01
2024-07-12 18:48:08,995 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=36.4 pTM=0.222 ipTM=0.134 tol=6.75
2024-07-12 18:48:17,053 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=37 pTM=0.225 ipTM=0.131 tol=4.06
2024-07-12 18:48:25,110 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=36.7 pTM=0.224 ipTM=0.144 tol=4.59
2024-07-12 18:48:33,175 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=35.9 pTM=0.223 ipTM=0.149 tol=4.26
2024-07-12 18:48:41,236 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=36.8 pTM=0.225 ipTM=0.152 tol=3.64
2024-07-12 18:48:49,298 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=36.1 pTM=0.226 ipTM=0.167 tol=3.27
2024-07-12 18:48:57,358 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=36.5 pTM=0.224 ipTM=0.159 tol=4.96
2024-07-12 18:49:05,421 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=36.6 pTM=0.226 ipTM=0.18 tol=5.55
2024-07-12 18:49:13,482 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=36.9 pTM=0.229 ipTM=0.199 tol=4.39
2024-07-12 18:49:21,553 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=36.5 pTM=0.227 ipTM=0.185 tol=4.93
2024-07-12 18:49:29,613 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=36.9 pTM=0.232 ipTM=0.201 tol=5.33
2024-07-12 18:49:37,676 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=37.4 pTM=0.229 ipTM=0.198 tol=4.05
2024-07-12 18:49:45,733 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=36.9 pTM=0.229 ipTM=0.201 tol=3.85
2024-07-12 18:49:53,787 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=36.9 pTM=0.228 ipTM=0.207 tol=3.29
2024-07-12 18:50:01,851 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=36.8 pTM=0.226 ipTM=0.192 tol=3.57
2024-07-12 18:50:09,903 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=37.3 pTM=0.23 ipTM=0.219 tol=2.56
2024-07-12 18:50:17,966 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=37.1 pTM=0.229 ipTM=0.202 tol=3.75
2024-07-12 18:50:26,023 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=37.2 pTM=0.23 ipTM=0.217 tol=4.06
2024-07-12 18:50:34,079 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=37.6 pTM=0.23 ipTM=0.193 tol=3.39
2024-07-12 18:50:42,138 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=36.9 pTM=0.232 ipTM=0.219 tol=5.12
2024-07-12 18:50:50,201 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=37.2 pTM=0.232 ipTM=0.195 tol=10.2
2024-07-12 18:50:58,270 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=36.9 pTM=0.232 ipTM=0.211 tol=8.03
2024-07-12 18:51:06,332 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=37.3 pTM=0.231 ipTM=0.189 tol=7.18
2024-07-12 18:51:14,394 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=37.3 pTM=0.233 ipTM=0.21 tol=4.54
2024-07-12 18:51:14,395 alphafold2_multimer_v3_model_2_seed_000 took 249.8s (30 recycles)
2024-07-12 18:51:22,743 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=33.7 pTM=0.254 ipTM=0.214
2024-07-12 18:51:30,880 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=34.6 pTM=0.224 ipTM=0.12 tol=19.8
2024-07-12 18:51:39,012 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=34.1 pTM=0.232 ipTM=0.185 tol=13.4
2024-07-12 18:51:47,145 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=34.8 pTM=0.228 ipTM=0.135 tol=14.7
2024-07-12 18:51:55,280 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=35.2 pTM=0.231 ipTM=0.146 tol=8.2
2024-07-12 18:52:03,410 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=34.2 pTM=0.241 ipTM=0.218 tol=17.6
2024-07-12 18:52:11,547 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=34.5 pTM=0.234 ipTM=0.165 tol=11.9
2024-07-12 18:52:19,681 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=35.4 pTM=0.244 ipTM=0.215 tol=10.4
2024-07-12 18:52:27,823 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=35.3 pTM=0.232 ipTM=0.148 tol=10.5
2024-07-12 18:52:35,953 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=35 pTM=0.235 ipTM=0.168 tol=5.61
2024-07-12 18:52:44,088 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=34.4 pTM=0.236 ipTM=0.155 tol=3.07
2024-07-12 18:52:52,211 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=35.1 pTM=0.24 ipTM=0.164 tol=4.77
2024-07-12 18:53:00,340 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=34.4 pTM=0.235 ipTM=0.148 tol=4.56
2024-07-12 18:53:08,470 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=34.8 pTM=0.238 ipTM=0.157 tol=3.31
2024-07-12 18:53:16,617 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=34.2 pTM=0.236 ipTM=0.176 tol=4.64
2024-07-12 18:53:24,751 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=34.6 pTM=0.238 ipTM=0.18 tol=3.54
2024-07-12 18:53:32,888 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=34.6 pTM=0.236 ipTM=0.154 tol=10
2024-07-12 18:53:41,022 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=35.2 pTM=0.238 ipTM=0.184 tol=7.89
2024-07-12 18:53:49,153 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=35 pTM=0.247 ipTM=0.243 tol=8.08
2024-07-12 18:53:57,297 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=35.3 pTM=0.234 ipTM=0.165 tol=8.91
2024-07-12 18:54:05,422 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=35.3 pTM=0.239 ipTM=0.199 tol=5.3
2024-07-12 18:54:13,554 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=35.6 pTM=0.234 ipTM=0.165 tol=3.95
2024-07-12 18:54:21,693 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=35.8 pTM=0.236 ipTM=0.173 tol=4.33
2024-07-12 18:54:29,825 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=36 pTM=0.233 ipTM=0.168 tol=14.5
2024-07-12 18:54:37,956 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=35.8 pTM=0.232 ipTM=0.173 tol=6.7
2024-07-12 18:54:46,087 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=36.3 pTM=0.235 ipTM=0.183 tol=6.16
2024-07-12 18:54:54,218 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=36.1 pTM=0.239 ipTM=0.181 tol=3.58
2024-07-12 18:55:02,342 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=36.1 pTM=0.24 ipTM=0.201 tol=2.9
2024-07-12 18:55:10,476 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=35.9 pTM=0.237 ipTM=0.17 tol=2.66
2024-07-12 18:55:18,604 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=36 pTM=0.239 ipTM=0.2 tol=2.02
2024-07-12 18:55:26,734 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=35.8 pTM=0.24 ipTM=0.184 tol=2.71
2024-07-12 18:55:26,735 alphafold2_multimer_v3_model_3_seed_000 took 252.1s (30 recycles)
2024-07-12 18:55:35,098 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=35.1 pTM=0.228 ipTM=0.167
2024-07-12 18:55:43,224 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=35.9 pTM=0.231 ipTM=0.17 tol=18.7
2024-07-12 18:55:51,352 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=36.7 pTM=0.234 ipTM=0.129 tol=11.9
2024-07-12 18:55:59,484 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=36.8 pTM=0.231 ipTM=0.139 tol=8.25
2024-07-12 18:56:07,613 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=37.5 pTM=0.236 ipTM=0.208 tol=7.57
2024-07-12 18:56:15,747 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=37.3 pTM=0.232 ipTM=0.149 tol=5.32
2024-07-12 18:56:23,892 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=37.7 pTM=0.237 ipTM=0.219 tol=4.61
2024-07-12 18:56:32,030 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=37.1 pTM=0.23 ipTM=0.151 tol=3.35
2024-07-12 18:56:40,171 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=37.6 pTM=0.234 ipTM=0.172 tol=3.86
2024-07-12 18:56:48,310 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=37 pTM=0.229 ipTM=0.153 tol=8.59
2024-07-12 18:56:56,455 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=37.5 pTM=0.236 ipTM=0.208 tol=7.98
2024-07-12 18:57:04,599 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=37.4 pTM=0.231 ipTM=0.146 tol=4.05
2024-07-12 18:57:12,748 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=37.4 pTM=0.234 ipTM=0.146 tol=4.32
2024-07-12 18:57:20,886 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=37.9 pTM=0.237 ipTM=0.17 tol=3.5
2024-07-12 18:57:29,033 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=37.2 pTM=0.235 ipTM=0.164 tol=4.09
2024-07-12 18:57:37,170 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=37.5 pTM=0.237 ipTM=0.216 tol=4.19
2024-07-12 18:57:45,312 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=37.4 pTM=0.233 ipTM=0.164 tol=5.46
2024-07-12 18:57:53,446 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=37.6 pTM=0.238 ipTM=0.201 tol=5
2024-07-12 18:58:01,575 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=37.6 pTM=0.235 ipTM=0.162 tol=7.56
2024-07-12 18:58:09,705 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=37.7 pTM=0.239 ipTM=0.228 tol=8.07
2024-07-12 18:58:17,836 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=37.1 pTM=0.235 ipTM=0.159 tol=7.3
2024-07-12 18:58:25,964 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=37.3 pTM=0.237 ipTM=0.166 tol=6.96
2024-07-12 18:58:34,093 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=37.4 pTM=0.236 ipTM=0.164 tol=6.82
2024-07-12 18:58:42,220 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=37.7 pTM=0.238 ipTM=0.204 tol=7.21
2024-07-12 18:58:50,352 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=37.7 pTM=0.235 ipTM=0.161 tol=4.34
2024-07-12 18:58:58,484 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=37.9 pTM=0.236 ipTM=0.152 tol=3.25
2024-07-12 18:59:06,615 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=37.3 pTM=0.233 ipTM=0.162 tol=5.67
2024-07-12 18:59:14,741 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=37.9 pTM=0.242 ipTM=0.268 tol=5.71
2024-07-12 18:59:22,870 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=37.4 pTM=0.237 ipTM=0.164 tol=5.71
2024-07-12 18:59:31,008 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=37.7 pTM=0.239 ipTM=0.166 tol=6.11
2024-07-12 18:59:39,138 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=37.3 pTM=0.234 ipTM=0.156 tol=2.74
2024-07-12 18:59:39,138 alphafold2_multimer_v3_model_4_seed_000 took 252.2s (30 recycles)
2024-07-12 18:59:47,511 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=33.5 pTM=0.238 ipTM=0.266
2024-07-12 18:59:55,681 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=34.6 pTM=0.22 ipTM=0.108 tol=23
2024-07-12 19:00:03,843 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=35 pTM=0.225 ipTM=0.159 tol=14.7
2024-07-12 19:00:12,000 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=34.8 pTM=0.226 ipTM=0.172 tol=6.68
2024-07-12 19:00:20,145 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=35 pTM=0.228 ipTM=0.143 tol=10.1
2024-07-12 19:00:28,288 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=35.8 pTM=0.236 ipTM=0.239 tol=9.87
2024-07-12 19:00:36,432 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=35 pTM=0.225 ipTM=0.155 tol=6.39
2024-07-12 19:00:44,580 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=35.4 pTM=0.226 ipTM=0.154 tol=9
2024-07-12 19:00:52,719 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=35.3 pTM=0.229 ipTM=0.186 tol=8.36
2024-07-12 19:01:00,863 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=34.9 pTM=0.22 ipTM=0.151 tol=4.21
2024-07-12 19:01:09,007 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=34.6 pTM=0.224 ipTM=0.186 tol=3.64
2024-07-12 19:01:17,150 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=34.7 pTM=0.224 ipTM=0.163 tol=3.49
2024-07-12 19:01:25,300 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=34.2 pTM=0.219 ipTM=0.173 tol=5.39
2024-07-12 19:01:33,440 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=35.5 pTM=0.228 ipTM=0.179 tol=6.76
2024-07-12 19:01:41,584 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=35.2 pTM=0.232 ipTM=0.253 tol=9.12
2024-07-12 19:01:49,725 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=35.2 pTM=0.228 ipTM=0.185 tol=4.5
2024-07-12 19:01:57,875 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=35.3 pTM=0.231 ipTM=0.187 tol=4.98
2024-07-12 19:02:06,015 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=34.8 pTM=0.221 ipTM=0.166 tol=3.14
2024-07-12 19:02:14,159 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=35.4 pTM=0.226 ipTM=0.181 tol=2.66
2024-07-12 19:02:22,301 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=35.2 pTM=0.22 ipTM=0.163 tol=2.49
2024-07-12 19:02:30,448 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=35.1 pTM=0.22 ipTM=0.167 tol=4.77
2024-07-12 19:02:38,606 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=34.8 pTM=0.221 ipTM=0.172 tol=9.14
2024-07-12 19:02:46,755 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=35.2 pTM=0.221 ipTM=0.153 tol=9.78
2024-07-12 19:02:54,900 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=35 pTM=0.217 ipTM=0.163 tol=8.28
2024-07-12 19:03:03,046 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=34.5 pTM=0.217 ipTM=0.163 tol=4.92
2024-07-12 19:03:11,194 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=35.2 pTM=0.222 ipTM=0.17 tol=7.28
2024-07-12 19:03:19,343 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=34.7 pTM=0.222 ipTM=0.171 tol=5.5
2024-07-12 19:03:27,488 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=35 pTM=0.22 ipTM=0.179 tol=7.05
2024-07-12 19:03:35,635 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=35.2 pTM=0.222 ipTM=0.164 tol=7.67
2024-07-12 19:03:43,780 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=35.3 pTM=0.225 ipTM=0.198 tol=8.46
2024-07-12 19:03:51,925 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=35.1 pTM=0.221 ipTM=0.157 tol=10.7
2024-07-12 19:03:51,926 alphafold2_multimer_v3_model_5_seed_000 took 252.5s (30 recycles)
2024-07-12 19:03:52,177 reranking models by 'multimer' metric
2024-07-12 19:04:07,455 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 19:04:47,068 Relaxation took 54.9s
2024-07-12 19:04:47,068 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=37.3 pTM=0.233 ipTM=0.21
2024-07-12 19:05:16,436 Relaxation took 29.4s
2024-07-12 19:05:16,436 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=35.8 pTM=0.24 ipTM=0.184
2024-07-12 19:05:36,991 Relaxation took 20.6s
2024-07-12 19:05:36,992 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=37.3 pTM=0.234 ipTM=0.156
2024-07-12 19:05:58,987 Relaxation took 22.0s
2024-07-12 19:05:58,987 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=35.1 pTM=0.221 ipTM=0.157
2024-07-12 19:06:32,009 Relaxation took 33.0s
2024-07-12 19:06:32,009 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=37 pTM=0.217 ipTM=0.135
2024-07-12 19:06:36,290 Done