2024-07-12 19:17:23,313 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-12 19:17:23,633 Running on GPU 2024-07-12 19:17:35,851 Found 6 citations for tools or databases 2024-07-12 19:17:35,851 Query 1/1: RNFT2_EMSY (length 1766) 2024-07-12 19:17:36,319 Sleeping for 6s. Reason: PENDING 2024-07-12 19:17:42,768 Sleeping for 5s. Reason: RUNNING 2024-07-12 19:17:48,190 Sleeping for 6s. Reason: RUNNING 2024-07-12 19:17:54,627 Sleeping for 7s. Reason: RUNNING 2024-07-12 19:18:02,065 Sleeping for 10s. Reason: RUNNING 2024-07-12 19:18:12,491 Sleeping for 8s. Reason: RUNNING 2024-07-12 19:18:20,932 Sleeping for 6s. Reason: RUNNING 2024-07-12 19:18:27,342 Sleeping for 10s. Reason: RUNNING 2024-07-12 19:18:37,803 Sleeping for 6s. Reason: RUNNING 2024-07-12 19:18:44,224 Sleeping for 6s. Reason: RUNNING 2024-07-12 19:18:50,640 Sleeping for 9s. Reason: RUNNING 2024-07-12 19:19:00,055 Sleeping for 5s. Reason: RUNNING 2024-07-12 19:19:07,131 Sleeping for 5s. Reason: PENDING 2024-07-12 19:19:12,534 Sleeping for 6s. Reason: RUNNING 2024-07-12 19:19:18,945 Sleeping for 9s. Reason: RUNNING 2024-07-12 19:19:28,422 Sleeping for 9s. Reason: RUNNING 2024-07-12 19:19:37,843 Sleeping for 6s. Reason: RUNNING 2024-07-12 19:19:44,276 Sleeping for 9s. Reason: RUNNING 2024-07-12 19:19:53,705 Sleeping for 5s. Reason: RUNNING 2024-07-12 19:20:02,499 Setting max_seq=508, max_extra_seq=2048 2024-07-12 19:25:03,304 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=32.8 pTM=0.296 ipTM=0.193 2024-07-12 19:26:49,390 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=33.4 pTM=0.301 ipTM=0.21 tol=19.3 2024-07-12 19:28:35,624 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=33.2 pTM=0.297 ipTM=0.214 tol=15.2 2024-07-12 19:30:21,878 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=33.2 pTM=0.296 ipTM=0.223 tol=11.8 2024-07-12 19:32:08,122 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=33.2 pTM=0.293 ipTM=0.212 tol=8.55 2024-07-12 19:33:54,392 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=33.1 pTM=0.292 ipTM=0.216 tol=7.79 2024-07-12 19:35:40,659 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=33.1 pTM=0.292 ipTM=0.214 tol=6.19 2024-07-12 19:37:26,936 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=33 pTM=0.291 ipTM=0.212 tol=7.55 2024-07-12 19:39:13,220 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=32.9 pTM=0.293 ipTM=0.21 tol=8.82 2024-07-12 19:40:59,511 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=32.9 pTM=0.291 ipTM=0.208 tol=8.57 2024-07-12 19:42:45,816 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=32.8 pTM=0.289 ipTM=0.209 tol=10.1 2024-07-12 19:44:32,138 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=32.8 pTM=0.29 ipTM=0.21 tol=10.1 2024-07-12 19:46:18,440 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=32.8 pTM=0.29 ipTM=0.21 tol=10.7 2024-07-12 19:48:04,736 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=32.8 pTM=0.29 ipTM=0.213 tol=6.93 2024-07-12 19:49:51,067 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=32.7 pTM=0.291 ipTM=0.215 tol=7.49 2024-07-12 19:51:37,376 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=32.6 pTM=0.291 ipTM=0.217 tol=7.98 2024-07-12 19:53:23,679 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=32.6 pTM=0.289 ipTM=0.216 tol=8.22 2024-07-12 19:55:09,959 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=32.8 pTM=0.292 ipTM=0.218 tol=10.8 2024-07-12 19:56:56,276 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=32.6 pTM=0.29 ipTM=0.21 tol=7.47 2024-07-12 19:58:42,604 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=32.8 pTM=0.29 ipTM=0.208 tol=6.61 2024-07-12 20:00:28,940 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=32.6 pTM=0.289 ipTM=0.209 tol=6.04 2024-07-12 20:02:15,244 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=32.8 pTM=0.291 ipTM=0.209 tol=5.75 2024-07-12 20:04:01,532 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=32.7 pTM=0.291 ipTM=0.208 tol=7.43 2024-07-12 20:05:47,865 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=32.8 pTM=0.29 ipTM=0.21 tol=6.51 2024-07-12 20:07:34,170 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=32.7 pTM=0.291 ipTM=0.213 tol=7.56 2024-07-12 20:09:20,490 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=32.8 pTM=0.29 ipTM=0.213 tol=5.57 2024-07-12 20:11:06,802 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=32.9 pTM=0.291 ipTM=0.209 tol=5.81 2024-07-12 20:12:53,116 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=32.9 pTM=0.291 ipTM=0.216 tol=7.26 2024-07-12 20:14:39,455 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=32.8 pTM=0.29 ipTM=0.212 tol=6.57 2024-07-12 20:16:25,778 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=32.8 pTM=0.291 ipTM=0.212 tol=14.2 2024-07-12 20:18:12,107 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=32.9 pTM=0.29 ipTM=0.207 tol=18 2024-07-12 20:18:12,109 alphafold2_multimer_v3_model_1_seed_000 took 3447.1s (30 recycles) 2024-07-12 20:20:00,623 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=32.2 pTM=0.301 ipTM=0.182 2024-07-12 20:21:46,713 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=32.7 pTM=0.304 ipTM=0.195 tol=19.5 2024-07-12 20:23:32,791 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=32.3 pTM=0.307 ipTM=0.216 tol=14.7 2024-07-12 20:25:18,899 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=32.4 pTM=0.306 ipTM=0.215 tol=11.8 2024-07-12 20:27:05,022 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=32.2 pTM=0.303 ipTM=0.208 tol=10.6 2024-07-12 20:28:51,187 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=32.4 pTM=0.307 ipTM=0.225 tol=8.26 2024-07-12 20:30:37,356 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=32.5 pTM=0.303 ipTM=0.215 tol=8.96 2024-07-12 20:32:23,529 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=32.2 pTM=0.303 ipTM=0.222 tol=8.53 2024-07-12 20:34:09,714 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=32.2 pTM=0.304 ipTM=0.215 tol=7.12 2024-07-12 20:35:55,890 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=32.3 pTM=0.306 ipTM=0.224 tol=8.47 2024-07-12 20:37:42,076 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=32.1 pTM=0.301 ipTM=0.212 tol=6.97 2024-07-12 20:39:28,259 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=32.1 pTM=0.306 ipTM=0.218 tol=8.78 2024-07-12 20:41:14,432 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=32 pTM=0.303 ipTM=0.214 tol=8.53 2024-07-12 20:43:00,543 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=31.9 pTM=0.302 ipTM=0.21 tol=9.95 2024-07-12 20:44:46,696 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=31.8 pTM=0.302 ipTM=0.205 tol=9.45 2024-07-12 20:46:32,912 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=32 pTM=0.305 ipTM=0.212 tol=11.6 2024-07-12 20:48:19,115 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=31.8 pTM=0.303 ipTM=0.212 tol=11.5 2024-07-12 20:50:05,286 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=31.9 pTM=0.304 ipTM=0.211 tol=9.02 2024-07-12 20:51:51,463 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=31.9 pTM=0.303 ipTM=0.207 tol=6.82 2024-07-12 20:53:37,657 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=32 pTM=0.304 ipTM=0.21 tol=8.53 2024-07-12 20:55:23,867 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=32.1 pTM=0.302 ipTM=0.212 tol=7.7 2024-07-12 20:57:10,067 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=32 pTM=0.304 ipTM=0.206 tol=7.67 2024-07-12 20:58:56,259 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=32.3 pTM=0.306 ipTM=0.207 tol=9.75 2024-07-12 21:00:42,473 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=32.2 pTM=0.302 ipTM=0.213 tol=11.4 2024-07-12 21:02:28,632 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=32.1 pTM=0.305 ipTM=0.207 tol=10.2 2024-07-12 21:04:14,813 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=31.9 pTM=0.303 ipTM=0.206 tol=8.46 2024-07-12 21:06:01,000 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=32.2 pTM=0.302 ipTM=0.202 tol=7.45 2024-07-12 21:07:47,166 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=32.2 pTM=0.302 ipTM=0.213 tol=6.14 2024-07-12 21:09:33,328 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=32.3 pTM=0.301 ipTM=0.206 tol=5.75 2024-07-12 21:11:19,491 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=32.4 pTM=0.303 ipTM=0.207 tol=6.91 2024-07-12 21:13:05,625 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=32.5 pTM=0.301 ipTM=0.203 tol=10.3 2024-07-12 21:13:05,627 alphafold2_multimer_v3_model_2_seed_000 took 3291.1s (30 recycles) 2024-07-12 21:14:54,426 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=32.7 pTM=0.288 ipTM=0.182 2024-07-12 21:16:41,667 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=32.7 pTM=0.289 ipTM=0.191 tol=27.5 2024-07-12 21:18:28,963 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=32.7 pTM=0.292 ipTM=0.2 tol=14.6 2024-07-12 21:20:16,278 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=32.8 pTM=0.293 ipTM=0.203 tol=13.4 2024-07-12 21:22:03,586 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=32.8 pTM=0.292 ipTM=0.205 tol=11.2 2024-07-12 21:23:50,915 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=33.1 pTM=0.294 ipTM=0.213 tol=13.8 2024-07-12 21:25:38,247 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=32.9 pTM=0.293 ipTM=0.201 tol=11.8 2024-07-12 21:27:25,602 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=33.1 pTM=0.293 ipTM=0.207 tol=10.4 2024-07-12 21:29:12,922 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=33.1 pTM=0.295 ipTM=0.215 tol=13 2024-07-12 21:31:00,231 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=33 pTM=0.295 ipTM=0.212 tol=9.94 2024-07-12 21:32:47,541 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=33 pTM=0.294 ipTM=0.21 tol=10.6 2024-07-12 21:34:34,860 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=32.8 pTM=0.293 ipTM=0.206 tol=9.12 2024-07-12 21:36:22,148 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=32.9 pTM=0.294 ipTM=0.208 tol=8.66 2024-07-12 21:38:09,445 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=32.8 pTM=0.293 ipTM=0.205 tol=9.28 2024-07-12 21:39:56,696 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=33 pTM=0.294 ipTM=0.206 tol=9.23 2024-07-12 21:41:43,967 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=32.9 pTM=0.294 ipTM=0.202 tol=11.4 2024-07-12 21:43:31,257 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=33 pTM=0.294 ipTM=0.206 tol=11.4 2024-07-12 21:45:18,552 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=32.8 pTM=0.295 ipTM=0.204 tol=7.59 2024-07-12 21:47:05,858 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=32.9 pTM=0.295 ipTM=0.21 tol=8.65 2024-07-12 21:48:53,194 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=33 pTM=0.293 ipTM=0.21 tol=6.8 2024-07-12 21:50:40,488 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=32.9 pTM=0.293 ipTM=0.206 tol=7.37 2024-07-12 21:52:27,827 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=32.8 pTM=0.295 ipTM=0.208 tol=7.52 2024-07-12 21:54:15,140 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=32.9 pTM=0.295 ipTM=0.206 tol=6.5 2024-07-12 21:56:02,505 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=32.9 pTM=0.293 ipTM=0.208 tol=5.24 2024-07-12 21:57:49,837 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=32.9 pTM=0.294 ipTM=0.207 tol=6.36 2024-07-12 21:59:37,144 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=32.8 pTM=0.294 ipTM=0.21 tol=5.58 2024-07-12 22:01:24,440 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=32.9 pTM=0.293 ipTM=0.209 tol=6.62 2024-07-12 22:03:11,731 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=33 pTM=0.293 ipTM=0.213 tol=6.43 2024-07-12 22:04:59,024 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=33.1 pTM=0.293 ipTM=0.209 tol=7.62 2024-07-12 22:06:46,336 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=33 pTM=0.293 ipTM=0.208 tol=6.23 2024-07-12 22:08:33,649 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=32.9 pTM=0.293 ipTM=0.207 tol=6.07 2024-07-12 22:08:33,651 alphafold2_multimer_v3_model_3_seed_000 took 3326.2s (30 recycles) 2024-07-12 22:10:22,745 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=30.1 pTM=0.282 ipTM=0.181 2024-07-12 22:12:10,211 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=30.5 pTM=0.285 ipTM=0.18 tol=31.3 2024-07-12 22:13:57,514 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=30.7 pTM=0.29 ipTM=0.193 tol=25.6 2024-07-12 22:15:44,844 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=31 pTM=0.298 ipTM=0.271 tol=22.4 2024-07-12 22:17:32,252 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=31.3 pTM=0.29 ipTM=0.208 tol=16.9 2024-07-12 22:19:19,717 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=31.3 pTM=0.29 ipTM=0.208 tol=23.4 2024-07-12 22:21:07,029 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=31.5 pTM=0.296 ipTM=0.246 tol=20.6 2024-07-12 22:22:54,402 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=31.1 pTM=0.292 ipTM=0.22 tol=17.6 2024-07-12 22:24:41,798 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=31.5 pTM=0.292 ipTM=0.218 tol=15 2024-07-12 22:26:29,220 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=31.2 pTM=0.29 ipTM=0.21 tol=14.6 2024-07-12 22:28:16,668 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=31.4 pTM=0.29 ipTM=0.211 tol=22.1 2024-07-12 22:30:04,086 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=31.1 pTM=0.29 ipTM=0.211 tol=20.6 2024-07-12 22:31:51,498 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=31.5 pTM=0.292 ipTM=0.219 tol=16.7 2024-07-12 22:33:38,903 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=31 pTM=0.291 ipTM=0.213 tol=14.3 2024-07-12 22:35:26,306 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=31.3 pTM=0.292 ipTM=0.22 tol=13.3 2024-07-12 22:37:13,687 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=31.1 pTM=0.292 ipTM=0.224 tol=12.2 2024-07-12 22:39:01,005 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=31.4 pTM=0.292 ipTM=0.219 tol=15.2 2024-07-12 22:40:48,405 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=31.1 pTM=0.292 ipTM=0.219 tol=15 2024-07-12 22:42:35,753 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=31.4 pTM=0.294 ipTM=0.226 tol=11.9 2024-07-12 22:44:23,119 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=31.1 pTM=0.29 ipTM=0.207 tol=16.1 2024-07-12 22:46:10,512 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=31.3 pTM=0.291 ipTM=0.213 tol=14.9 2024-07-12 22:47:57,847 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=31.2 pTM=0.291 ipTM=0.208 tol=12.8 2024-07-12 22:49:45,223 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=31.4 pTM=0.29 ipTM=0.203 tol=12.7 2024-07-12 22:51:32,663 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=31.5 pTM=0.29 ipTM=0.207 tol=21 2024-07-12 22:53:20,035 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=31.3 pTM=0.29 ipTM=0.212 tol=20.7 2024-07-12 22:55:07,340 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=31.3 pTM=0.292 ipTM=0.221 tol=15.7 2024-07-12 22:56:54,717 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=31.6 pTM=0.29 ipTM=0.211 tol=16.3 2024-07-12 22:58:42,095 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=31.2 pTM=0.29 ipTM=0.212 tol=15.9 2024-07-12 23:00:29,413 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=31.5 pTM=0.293 ipTM=0.227 tol=14.7 2024-07-12 23:02:16,740 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=31.3 pTM=0.29 ipTM=0.208 tol=15.6 2024-07-12 23:04:04,061 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=31.5 pTM=0.294 ipTM=0.227 tol=11.5 2024-07-12 23:04:04,063 alphafold2_multimer_v3_model_4_seed_000 took 3328.4s (30 recycles) 2024-07-12 23:05:52,967 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=31.2 pTM=0.287 ipTM=0.175 2024-07-12 23:07:40,360 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=31.8 pTM=0.29 ipTM=0.175 tol=27 2024-07-12 23:09:27,819 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=31.8 pTM=0.291 ipTM=0.181 tol=22.7 2024-07-12 23:11:15,236 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=31.8 pTM=0.293 ipTM=0.19 tol=18.7 2024-07-12 23:13:02,655 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=31.7 pTM=0.291 ipTM=0.191 tol=19.4 2024-07-12 23:14:50,139 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=31.6 pTM=0.29 ipTM=0.179 tol=20.9 2024-07-12 23:16:37,678 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=31.7 pTM=0.288 ipTM=0.184 tol=19.6 2024-07-12 23:18:25,168 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=31.5 pTM=0.289 ipTM=0.185 tol=21.8 2024-07-12 23:20:12,618 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=31.5 pTM=0.29 ipTM=0.186 tol=18.5 2024-07-12 23:22:00,067 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=31.6 pTM=0.291 ipTM=0.186 tol=15.3 2024-07-12 23:23:47,547 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=31.8 pTM=0.289 ipTM=0.187 tol=14.2 2024-07-12 23:25:34,980 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=31.7 pTM=0.289 ipTM=0.186 tol=11.4 2024-07-12 23:27:22,453 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=31.9 pTM=0.29 ipTM=0.186 tol=16.1 2024-07-12 23:29:09,920 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=31.8 pTM=0.289 ipTM=0.184 tol=13.8 2024-07-12 23:30:57,348 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=31.9 pTM=0.29 ipTM=0.185 tol=14 2024-07-12 23:32:44,818 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=32 pTM=0.291 ipTM=0.186 tol=23.5 2024-07-12 23:34:32,233 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=31.7 pTM=0.289 ipTM=0.189 tol=17.4 2024-07-12 23:36:19,655 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=31.7 pTM=0.291 ipTM=0.188 tol=24.2 2024-07-12 23:38:07,118 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=31.9 pTM=0.29 ipTM=0.187 tol=22.4 2024-07-12 23:39:54,592 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=31.8 pTM=0.289 ipTM=0.183 tol=14.7 2024-07-12 23:41:42,064 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=31.8 pTM=0.289 ipTM=0.186 tol=18.1 2024-07-12 23:43:29,512 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=31.8 pTM=0.29 ipTM=0.185 tol=20.4 2024-07-12 23:45:16,956 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=31.8 pTM=0.289 ipTM=0.185 tol=17.2 2024-07-12 23:47:04,436 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=31.8 pTM=0.288 ipTM=0.181 tol=13.5 2024-07-12 23:48:51,860 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=31.9 pTM=0.288 ipTM=0.181 tol=11.2 2024-07-12 23:50:39,346 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=31.8 pTM=0.288 ipTM=0.182 tol=10.5 2024-07-12 23:52:26,759 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=31.7 pTM=0.288 ipTM=0.184 tol=14.4 2024-07-12 23:54:14,197 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=31.6 pTM=0.288 ipTM=0.184 tol=14.6 2024-07-12 23:56:01,603 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=31.7 pTM=0.288 ipTM=0.182 tol=20 2024-07-12 23:57:49,035 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=31.8 pTM=0.288 ipTM=0.181 tol=21.3 2024-07-12 23:59:36,476 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=31.7 pTM=0.288 ipTM=0.182 tol=15.7 2024-07-12 23:59:36,478 alphafold2_multimer_v3_model_5_seed_000 took 3330.6s (30 recycles) 2024-07-12 23:59:38,314 reranking models by 'multimer' metric 2024-07-12 23:59:40,074 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-13 00:04:22,658 Relaxation took 284.3s 2024-07-13 00:04:22,658 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=31.5 pTM=0.294 ipTM=0.227 2024-07-13 00:10:18,549 Relaxation took 355.9s 2024-07-13 00:10:18,549 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=32.9 pTM=0.293 ipTM=0.207 2024-07-13 00:14:02,909 Relaxation took 224.4s 2024-07-13 00:14:02,909 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=32.9 pTM=0.29 ipTM=0.207 2024-07-13 00:19:25,924 Relaxation took 323.0s 2024-07-13 00:19:25,924 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=32.5 pTM=0.301 ipTM=0.203 2024-07-13 00:25:02,023 Relaxation took 336.1s 2024-07-13 00:25:02,024 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=31.7 pTM=0.288 ipTM=0.182 2024-07-13 00:25:08,510 Done