2024-07-12 19:47:33,045 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-12 19:47:33,436 Running on GPU 2024-07-12 19:47:48,365 Found 6 citations for tools or databases 2024-07-12 19:47:48,365 Query 1/1: RPR1B_GRP (length 474) 2024-07-12 19:47:48,827 Sleeping for 9s. Reason: PENDING 2024-07-12 19:47:58,243 Sleeping for 6s. Reason: RUNNING 2024-07-12 19:48:04,665 Sleeping for 9s. Reason: RUNNING 2024-07-12 19:48:14,093 Sleeping for 9s. Reason: RUNNING 2024-07-12 19:48:24,931 Sleeping for 8s. Reason: PENDING 2024-07-12 19:48:33,363 Sleeping for 9s. Reason: RUNNING 2024-07-12 19:48:44,135 Setting max_seq=508, max_extra_seq=2048 2024-07-12 19:52:25,537 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=53.2 pTM=0.346 ipTM=0.122 2024-07-12 19:52:30,639 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=56.5 pTM=0.346 ipTM=0.181 tol=10.6 2024-07-12 19:52:35,749 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=56.2 pTM=0.347 ipTM=0.152 tol=7.3 2024-07-12 19:52:40,852 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=55.8 pTM=0.351 ipTM=0.148 tol=3.83 2024-07-12 19:52:45,953 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=56 pTM=0.353 ipTM=0.153 tol=3.64 2024-07-12 19:52:51,054 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=55.8 pTM=0.352 ipTM=0.151 tol=2.58 2024-07-12 19:52:56,158 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=57.1 pTM=0.352 ipTM=0.149 tol=2.12 2024-07-12 19:53:01,260 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=57 pTM=0.35 ipTM=0.153 tol=2.22 2024-07-12 19:53:06,366 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=57.1 pTM=0.35 ipTM=0.146 tol=1.86 2024-07-12 19:53:11,468 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=57.2 pTM=0.351 ipTM=0.142 tol=1.5 2024-07-12 19:53:16,571 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=56.9 pTM=0.35 ipTM=0.141 tol=1.18 2024-07-12 19:53:21,676 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=57.4 pTM=0.351 ipTM=0.162 tol=1.76 2024-07-12 19:53:26,781 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=56.6 pTM=0.351 ipTM=0.149 tol=1.45 2024-07-12 19:53:31,887 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=57.4 pTM=0.351 ipTM=0.156 tol=0.908 2024-07-12 19:53:36,998 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=57.7 pTM=0.352 ipTM=0.157 tol=1.55 2024-07-12 19:53:42,104 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=57.6 pTM=0.351 ipTM=0.155 tol=0.942 2024-07-12 19:53:47,213 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=57.3 pTM=0.351 ipTM=0.156 tol=1.09 2024-07-12 19:53:52,319 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=57.6 pTM=0.353 ipTM=0.157 tol=1.12 2024-07-12 19:53:57,425 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=57 pTM=0.348 ipTM=0.151 tol=1.41 2024-07-12 19:54:02,534 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=58 pTM=0.35 ipTM=0.151 tol=2.41 2024-07-12 19:54:07,643 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=57.3 pTM=0.349 ipTM=0.148 tol=1.89 2024-07-12 19:54:12,753 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=57.7 pTM=0.351 ipTM=0.156 tol=2.09 2024-07-12 19:54:17,861 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=57.3 pTM=0.349 ipTM=0.15 tol=1.89 2024-07-12 19:54:22,972 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=57.7 pTM=0.352 ipTM=0.155 tol=0.945 2024-07-12 19:54:28,091 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=57.6 pTM=0.353 ipTM=0.16 tol=1.29 2024-07-12 19:54:33,205 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=57.4 pTM=0.35 ipTM=0.153 tol=1.29 2024-07-12 19:54:38,320 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=57.9 pTM=0.351 ipTM=0.153 tol=0.883 2024-07-12 19:54:43,436 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=58 pTM=0.352 ipTM=0.159 tol=1.31 2024-07-12 19:54:48,549 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=58.3 pTM=0.352 ipTM=0.155 tol=1.15 2024-07-12 19:54:53,663 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=58.3 pTM=0.351 ipTM=0.157 tol=1.17 2024-07-12 19:54:58,779 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=58.3 pTM=0.351 ipTM=0.15 tol=1.21 2024-07-12 19:54:58,779 alphafold2_multimer_v3_model_1_seed_000 took 302.9s (30 recycles) 2024-07-12 19:55:04,069 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=58.7 pTM=0.342 ipTM=0.12 2024-07-12 19:55:09,212 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=59.9 pTM=0.333 ipTM=0.127 tol=10 2024-07-12 19:55:14,351 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=60.6 pTM=0.329 ipTM=0.127 tol=7.05 2024-07-12 19:55:19,495 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=61 pTM=0.327 ipTM=0.121 tol=4.03 2024-07-12 19:55:24,648 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=60.8 pTM=0.327 ipTM=0.111 tol=3.96 2024-07-12 19:55:29,803 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=60.9 pTM=0.326 ipTM=0.103 tol=3.19 2024-07-12 19:55:34,953 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=60.8 pTM=0.327 ipTM=0.105 tol=6.43 2024-07-12 19:55:40,097 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=60.8 pTM=0.327 ipTM=0.105 tol=5.97 2024-07-12 19:55:45,251 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=60.9 pTM=0.328 ipTM=0.106 tol=3.78 2024-07-12 19:55:50,410 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=60.6 pTM=0.327 ipTM=0.109 tol=6.76 2024-07-12 19:55:55,554 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=60.3 pTM=0.328 ipTM=0.0934 tol=6.29 2024-07-12 19:56:00,699 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=60.3 pTM=0.329 ipTM=0.103 tol=6.5 2024-07-12 19:56:05,851 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=60.4 pTM=0.327 ipTM=0.103 tol=3.93 2024-07-12 19:56:11,008 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=60.7 pTM=0.327 ipTM=0.0987 tol=2.85 2024-07-12 19:56:16,158 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=60.5 pTM=0.327 ipTM=0.105 tol=2.03 2024-07-12 19:56:21,303 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=60.6 pTM=0.326 ipTM=0.0999 tol=2.52 2024-07-12 19:56:26,451 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=60.4 pTM=0.325 ipTM=0.0997 tol=2.82 2024-07-12 19:56:31,598 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=60.7 pTM=0.325 ipTM=0.0997 tol=7.17 2024-07-12 19:56:36,744 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=60.3 pTM=0.325 ipTM=0.0891 tol=12 2024-07-12 19:56:41,886 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=60.3 pTM=0.326 ipTM=0.0887 tol=7.12 2024-07-12 19:56:47,031 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=60 pTM=0.326 ipTM=0.0886 tol=8.39 2024-07-12 19:56:52,165 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=60.2 pTM=0.326 ipTM=0.0935 tol=8.16 2024-07-12 19:56:57,298 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=60 pTM=0.328 ipTM=0.0919 tol=7 2024-07-12 19:57:02,430 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=60.6 pTM=0.327 ipTM=0.0952 tol=7.8 2024-07-12 19:57:07,571 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=60.8 pTM=0.327 ipTM=0.0976 tol=4.28 2024-07-12 19:57:12,706 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=60.9 pTM=0.327 ipTM=0.0988 tol=4.09 2024-07-12 19:57:17,837 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=61 pTM=0.327 ipTM=0.0973 tol=4.36 2024-07-12 19:57:22,974 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=61.1 pTM=0.328 ipTM=0.0964 tol=3.21 2024-07-12 19:57:28,117 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=61.3 pTM=0.329 ipTM=0.0948 tol=4.45 2024-07-12 19:57:33,262 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=61 pTM=0.329 ipTM=0.0939 tol=4.61 2024-07-12 19:57:38,396 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=60.7 pTM=0.329 ipTM=0.0929 tol=1.95 2024-07-12 19:57:38,397 alphafold2_multimer_v3_model_2_seed_000 took 159.5s (30 recycles) 2024-07-12 19:57:43,703 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=57.4 pTM=0.333 ipTM=0.143 2024-07-12 19:57:48,853 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=57.8 pTM=0.336 ipTM=0.152 tol=7.94 2024-07-12 19:57:54,016 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=57.9 pTM=0.34 ipTM=0.145 tol=5.04 2024-07-12 19:57:59,158 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=57.7 pTM=0.342 ipTM=0.129 tol=9.69 2024-07-12 19:58:04,294 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=57.2 pTM=0.342 ipTM=0.135 tol=4.91 2024-07-12 19:58:09,430 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=57.2 pTM=0.342 ipTM=0.137 tol=2.37 2024-07-12 19:58:14,566 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=57.5 pTM=0.342 ipTM=0.137 tol=3.06 2024-07-12 19:58:19,703 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=57.3 pTM=0.342 ipTM=0.141 tol=1.29 2024-07-12 19:58:24,835 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=57.5 pTM=0.342 ipTM=0.137 tol=1.11 2024-07-12 19:58:29,966 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=57.2 pTM=0.342 ipTM=0.137 tol=1.34 2024-07-12 19:58:35,098 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=57 pTM=0.341 ipTM=0.135 tol=0.953 2024-07-12 19:58:40,231 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=56.9 pTM=0.343 ipTM=0.141 tol=1.21 2024-07-12 19:58:45,363 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=56.7 pTM=0.342 ipTM=0.14 tol=0.742 2024-07-12 19:58:50,506 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=56.9 pTM=0.342 ipTM=0.139 tol=1.57 2024-07-12 19:58:55,662 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=56.8 pTM=0.341 ipTM=0.134 tol=1.01 2024-07-12 19:59:00,797 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=56.9 pTM=0.343 ipTM=0.139 tol=1.51 2024-07-12 19:59:05,933 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=57.1 pTM=0.343 ipTM=0.139 tol=1.53 2024-07-12 19:59:11,073 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=57.3 pTM=0.343 ipTM=0.141 tol=1.5 2024-07-12 19:59:16,215 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=56.8 pTM=0.342 ipTM=0.136 tol=2.03 2024-07-12 19:59:21,347 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=56.7 pTM=0.341 ipTM=0.137 tol=1.19 2024-07-12 19:59:26,479 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=56.3 pTM=0.342 ipTM=0.142 tol=4.82 2024-07-12 19:59:31,616 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=56.8 pTM=0.343 ipTM=0.143 tol=2.89 2024-07-12 19:59:36,761 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=55.9 pTM=0.342 ipTM=0.141 tol=2.62 2024-07-12 19:59:41,899 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=56.5 pTM=0.342 ipTM=0.142 tol=3.34 2024-07-12 19:59:47,037 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=56.4 pTM=0.343 ipTM=0.148 tol=2.61 2024-07-12 19:59:52,179 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=56.8 pTM=0.343 ipTM=0.144 tol=1.46 2024-07-12 19:59:57,315 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=56.8 pTM=0.343 ipTM=0.154 tol=1.95 2024-07-12 20:00:02,451 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=57.2 pTM=0.344 ipTM=0.152 tol=1 2024-07-12 20:00:07,589 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=57.2 pTM=0.343 ipTM=0.157 tol=1.31 2024-07-12 20:00:12,729 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=57.1 pTM=0.344 ipTM=0.159 tol=1.11 2024-07-12 20:00:17,865 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=57.2 pTM=0.345 ipTM=0.156 tol=2.86 2024-07-12 20:00:17,866 alphafold2_multimer_v3_model_3_seed_000 took 159.3s (30 recycles) 2024-07-12 20:00:23,172 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=55.7 pTM=0.327 ipTM=0.103 2024-07-12 20:00:28,311 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=56.7 pTM=0.327 ipTM=0.11 tol=9.48 2024-07-12 20:00:33,448 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=56 pTM=0.326 ipTM=0.114 tol=3.98 2024-07-12 20:00:38,585 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=56.1 pTM=0.325 ipTM=0.117 tol=4.21 2024-07-12 20:00:43,722 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=55.6 pTM=0.325 ipTM=0.112 tol=3.46 2024-07-12 20:00:48,862 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=55.8 pTM=0.325 ipTM=0.111 tol=5.29 2024-07-12 20:00:54,000 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=56.2 pTM=0.327 ipTM=0.12 tol=6.91 2024-07-12 20:00:59,136 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=57.4 pTM=0.328 ipTM=0.161 tol=4.49 2024-07-12 20:01:04,277 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=56 pTM=0.327 ipTM=0.113 tol=4.83 2024-07-12 20:01:09,426 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=55.5 pTM=0.328 ipTM=0.11 tol=3.69 2024-07-12 20:01:14,569 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=55.5 pTM=0.328 ipTM=0.107 tol=4.04 2024-07-12 20:01:19,709 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=55.6 pTM=0.33 ipTM=0.102 tol=2.96 2024-07-12 20:01:24,849 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=57.4 pTM=0.329 ipTM=0.153 tol=8.66 2024-07-12 20:01:29,996 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=56 pTM=0.329 ipTM=0.105 tol=9.66 2024-07-12 20:01:35,141 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=55.2 pTM=0.33 ipTM=0.0985 tol=4.44 2024-07-12 20:01:40,282 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=56.3 pTM=0.33 ipTM=0.12 tol=3.67 2024-07-12 20:01:45,421 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=55.8 pTM=0.329 ipTM=0.105 tol=3.57 2024-07-12 20:01:50,569 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=56.1 pTM=0.329 ipTM=0.105 tol=3.97 2024-07-12 20:01:55,722 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=56.3 pTM=0.329 ipTM=0.119 tol=2.63 2024-07-12 20:02:00,863 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=55.8 pTM=0.328 ipTM=0.103 tol=3.78 2024-07-12 20:02:06,003 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=56.5 pTM=0.328 ipTM=0.122 tol=3.37 2024-07-12 20:02:11,141 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=56.2 pTM=0.327 ipTM=0.104 tol=3.73 2024-07-12 20:02:16,280 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=55.5 pTM=0.327 ipTM=0.105 tol=3.32 2024-07-12 20:02:21,420 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=56.3 pTM=0.328 ipTM=0.118 tol=7.2 2024-07-12 20:02:26,564 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=56.5 pTM=0.327 ipTM=0.116 tol=6.55 2024-07-12 20:02:31,710 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=55.6 pTM=0.328 ipTM=0.11 tol=3.64 2024-07-12 20:02:36,862 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=55.7 pTM=0.327 ipTM=0.119 tol=5.16 2024-07-12 20:02:42,002 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=55.5 pTM=0.328 ipTM=0.103 tol=5.83 2024-07-12 20:02:47,141 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=56.6 pTM=0.327 ipTM=0.118 tol=3.98 2024-07-12 20:02:52,279 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=56.2 pTM=0.326 ipTM=0.108 tol=4 2024-07-12 20:02:57,439 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=56.4 pTM=0.328 ipTM=0.119 tol=3.31 2024-07-12 20:02:57,440 alphafold2_multimer_v3_model_4_seed_000 took 159.4s (30 recycles) 2024-07-12 20:03:02,753 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=56.5 pTM=0.332 ipTM=0.139 2024-07-12 20:03:07,903 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=58.9 pTM=0.333 ipTM=0.149 tol=16.3 2024-07-12 20:03:13,055 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=58.1 pTM=0.335 ipTM=0.134 tol=7.2 2024-07-12 20:03:18,215 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=57.9 pTM=0.339 ipTM=0.131 tol=4.44 2024-07-12 20:03:23,355 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=58.1 pTM=0.339 ipTM=0.145 tol=5.77 2024-07-12 20:03:28,496 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=57 pTM=0.342 ipTM=0.128 tol=5.74 2024-07-12 20:03:33,648 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=57.3 pTM=0.338 ipTM=0.122 tol=3.62 2024-07-12 20:03:38,785 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=56.4 pTM=0.34 ipTM=0.132 tol=3.4 2024-07-12 20:03:43,937 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=57.8 pTM=0.338 ipTM=0.122 tol=6.92 2024-07-12 20:03:49,070 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=57.6 pTM=0.342 ipTM=0.135 tol=12.7 2024-07-12 20:03:54,210 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=57.1 pTM=0.343 ipTM=0.136 tol=3.08 2024-07-12 20:03:59,356 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=57.6 pTM=0.339 ipTM=0.13 tol=6.07 2024-07-12 20:04:04,509 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=57 pTM=0.339 ipTM=0.129 tol=8.18 2024-07-12 20:04:09,655 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=56.7 pTM=0.34 ipTM=0.133 tol=6.48 2024-07-12 20:04:14,805 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=57.5 pTM=0.338 ipTM=0.121 tol=4.65 2024-07-12 20:04:19,950 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=57.5 pTM=0.34 ipTM=0.134 tol=4.02 2024-07-12 20:04:25,090 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=57 pTM=0.34 ipTM=0.134 tol=2.94 2024-07-12 20:04:30,233 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=57.7 pTM=0.34 ipTM=0.15 tol=3.57 2024-07-12 20:04:35,367 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=56.5 pTM=0.346 ipTM=0.157 tol=4.42 2024-07-12 20:04:40,509 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=57.5 pTM=0.338 ipTM=0.125 tol=6.62 2024-07-12 20:04:45,642 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=58.3 pTM=0.341 ipTM=0.162 tol=4.03 2024-07-12 20:04:50,779 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=56.8 pTM=0.346 ipTM=0.139 tol=4.07 2024-07-12 20:04:55,922 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=57.1 pTM=0.34 ipTM=0.132 tol=2.89 2024-07-12 20:05:01,055 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=57.9 pTM=0.346 ipTM=0.159 tol=3.33 2024-07-12 20:05:06,196 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=56.7 pTM=0.342 ipTM=0.129 tol=3.49 2024-07-12 20:05:11,340 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=57.5 pTM=0.341 ipTM=0.126 tol=5.16 2024-07-12 20:05:16,481 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=58.5 pTM=0.344 ipTM=0.161 tol=4.96 2024-07-12 20:05:21,618 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=56.6 pTM=0.345 ipTM=0.144 tol=3.53 2024-07-12 20:05:26,765 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=57.7 pTM=0.34 ipTM=0.141 tol=4.49 2024-07-12 20:05:31,901 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=57.3 pTM=0.344 ipTM=0.156 tol=4.23 2024-07-12 20:05:37,038 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=56.9 pTM=0.343 ipTM=0.141 tol=2.46 2024-07-12 20:05:37,039 alphafold2_multimer_v3_model_5_seed_000 took 159.4s (30 recycles) 2024-07-12 20:05:37,199 reranking models by 'multimer' metric 2024-07-12 20:06:03,143 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-12 20:06:43,001 Relaxation took 65.8s 2024-07-12 20:06:43,001 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=57.2 pTM=0.345 ipTM=0.156 2024-07-12 20:07:10,395 Relaxation took 27.4s 2024-07-12 20:07:10,395 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=58.3 pTM=0.351 ipTM=0.15 2024-07-12 20:07:32,544 Relaxation took 22.1s 2024-07-12 20:07:32,544 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=56.9 pTM=0.343 ipTM=0.141 2024-07-12 20:07:54,910 Relaxation took 22.4s 2024-07-12 20:07:54,910 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=56.4 pTM=0.328 ipTM=0.119 2024-07-12 20:08:17,512 Relaxation took 22.6s 2024-07-12 20:08:17,513 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=60.7 pTM=0.329 ipTM=0.0929 2024-07-12 20:08:23,361 Done