2024-07-12 20:41:35,474 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 20:41:35,797 Running on GPU
2024-07-12 20:41:44,025 Found 6 citations for tools or databases
2024-07-12 20:41:44,026 Query 1/1: RT18B_ATP5E (length 309)
2024-07-12 20:41:44,490 Sleeping for 6s. Reason: PENDING
2024-07-12 20:41:50,912 Sleeping for 6s. Reason: RUNNING
2024-07-12 20:41:57,342 Sleeping for 7s. Reason: RUNNING
2024-07-12 20:42:04,793 Sleeping for 10s. Reason: RUNNING
2024-07-12 20:42:16,735 Sleeping for 10s. Reason: PENDING
2024-07-12 20:42:27,156 Sleeping for 9s. Reason: RUNNING
2024-07-12 20:42:38,120 Setting max_seq=508, max_extra_seq=2048
2024-07-12 20:46:09,947 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=55.2 pTM=0.399 ipTM=0.0854
2024-07-12 20:46:12,730 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=58.3 pTM=0.41 ipTM=0.0867 tol=3.06
2024-07-12 20:46:15,514 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=58.9 pTM=0.41 ipTM=0.0865 tol=5.67
2024-07-12 20:46:18,296 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=58.7 pTM=0.409 ipTM=0.0921 tol=5.38
2024-07-12 20:46:21,082 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=58.5 pTM=0.409 ipTM=0.0883 tol=2
2024-07-12 20:46:23,867 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=58.5 pTM=0.408 ipTM=0.0897 tol=1.95
2024-07-12 20:46:26,649 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=58.7 pTM=0.407 ipTM=0.0862 tol=1.46
2024-07-12 20:46:29,434 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=58.8 pTM=0.411 ipTM=0.0987 tol=6
2024-07-12 20:46:32,216 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=58.9 pTM=0.41 ipTM=0.0972 tol=4.05
2024-07-12 20:46:34,996 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=58.8 pTM=0.412 ipTM=0.0981 tol=2.86
2024-07-12 20:46:37,779 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=58.7 pTM=0.414 ipTM=0.112 tol=1.67
2024-07-12 20:46:40,559 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=58.3 pTM=0.412 ipTM=0.105 tol=2.4
2024-07-12 20:46:43,338 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=59.3 pTM=0.412 ipTM=0.105 tol=2.8
2024-07-12 20:46:46,115 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=59.4 pTM=0.412 ipTM=0.102 tol=1.85
2024-07-12 20:46:48,896 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=59 pTM=0.413 ipTM=0.104 tol=1.73
2024-07-12 20:46:51,679 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=59 pTM=0.414 ipTM=0.106 tol=1.99
2024-07-12 20:46:54,462 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=59.8 pTM=0.414 ipTM=0.105 tol=1.92
2024-07-12 20:46:57,244 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=58.7 pTM=0.415 ipTM=0.116 tol=1.82
2024-07-12 20:47:00,025 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=59.2 pTM=0.417 ipTM=0.12 tol=1.66
2024-07-12 20:47:02,805 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=59.7 pTM=0.416 ipTM=0.114 tol=1.38
2024-07-12 20:47:05,585 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=58.8 pTM=0.415 ipTM=0.112 tol=0.842
2024-07-12 20:47:08,364 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=58.9 pTM=0.413 ipTM=0.114 tol=3.06
2024-07-12 20:47:11,147 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=59 pTM=0.412 ipTM=0.113 tol=2.42
2024-07-12 20:47:13,926 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=58.6 pTM=0.412 ipTM=0.116 tol=1.54
2024-07-12 20:47:16,705 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=59.6 pTM=0.412 ipTM=0.103 tol=1.96
2024-07-12 20:47:19,489 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=59.1 pTM=0.413 ipTM=0.104 tol=2.17
2024-07-12 20:47:22,275 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=58.8 pTM=0.415 ipTM=0.106 tol=1.32
2024-07-12 20:47:25,054 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=58.8 pTM=0.41 ipTM=0.0983 tol=1.69
2024-07-12 20:47:27,838 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=58.3 pTM=0.412 ipTM=0.108 tol=0.993
2024-07-12 20:47:30,622 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=59.2 pTM=0.412 ipTM=0.109 tol=1.59
2024-07-12 20:47:33,406 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=58.8 pTM=0.413 ipTM=0.105 tol=1.62
2024-07-12 20:47:33,407 alphafold2_multimer_v3_model_1_seed_000 took 255.1s (30 recycles)
2024-07-12 20:47:36,276 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=56.4 pTM=0.397 ipTM=0.108
2024-07-12 20:47:39,060 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=59.6 pTM=0.411 ipTM=0.1 tol=4.12
2024-07-12 20:47:41,841 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=58.4 pTM=0.408 ipTM=0.0868 tol=6.07
2024-07-12 20:47:44,624 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=57.8 pTM=0.409 ipTM=0.0894 tol=2.08
2024-07-12 20:47:47,406 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=57 pTM=0.41 ipTM=0.0961 tol=2.57
2024-07-12 20:47:50,187 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=57.5 pTM=0.408 ipTM=0.0958 tol=3.1
2024-07-12 20:47:52,970 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=57.9 pTM=0.409 ipTM=0.0947 tol=2.35
2024-07-12 20:47:55,750 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=57.6 pTM=0.413 ipTM=0.104 tol=2.34
2024-07-12 20:47:58,533 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=58.1 pTM=0.416 ipTM=0.117 tol=1.91
2024-07-12 20:48:01,314 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=57.9 pTM=0.416 ipTM=0.117 tol=2.74
2024-07-12 20:48:04,099 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=57.8 pTM=0.417 ipTM=0.123 tol=1.04
2024-07-12 20:48:06,881 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=57.4 pTM=0.416 ipTM=0.12 tol=1.66
2024-07-12 20:48:09,663 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=57.8 pTM=0.414 ipTM=0.115 tol=2.1
2024-07-12 20:48:12,444 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=58.5 pTM=0.412 ipTM=0.106 tol=1.94
2024-07-12 20:48:15,224 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=57.9 pTM=0.414 ipTM=0.11 tol=2.34
2024-07-12 20:48:18,006 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=57.9 pTM=0.419 ipTM=0.12 tol=2.02
2024-07-12 20:48:20,787 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=58.6 pTM=0.418 ipTM=0.119 tol=1.86
2024-07-12 20:48:23,572 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=57.5 pTM=0.417 ipTM=0.122 tol=2.89
2024-07-12 20:48:26,354 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=58.1 pTM=0.418 ipTM=0.13 tol=3.97
2024-07-12 20:48:29,137 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=58.5 pTM=0.421 ipTM=0.137 tol=1.83
2024-07-12 20:48:31,918 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=58.3 pTM=0.418 ipTM=0.128 tol=1.25
2024-07-12 20:48:34,701 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=58.2 pTM=0.419 ipTM=0.131 tol=1.79
2024-07-12 20:48:37,485 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=57.8 pTM=0.416 ipTM=0.127 tol=1.3
2024-07-12 20:48:40,268 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=57.7 pTM=0.418 ipTM=0.135 tol=3.72
2024-07-12 20:48:43,050 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=58.4 pTM=0.414 ipTM=0.122 tol=3.56
2024-07-12 20:48:45,834 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=58 pTM=0.418 ipTM=0.123 tol=2.57
2024-07-12 20:48:48,618 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=58 pTM=0.418 ipTM=0.118 tol=0.937
2024-07-12 20:48:51,398 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=57.7 pTM=0.416 ipTM=0.119 tol=2.39
2024-07-12 20:48:54,182 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=57.6 pTM=0.418 ipTM=0.131 tol=1.54
2024-07-12 20:48:56,962 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=58 pTM=0.417 ipTM=0.128 tol=1.56
2024-07-12 20:48:59,746 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=58.1 pTM=0.417 ipTM=0.127 tol=1.6
2024-07-12 20:48:59,746 alphafold2_multimer_v3_model_2_seed_000 took 86.3s (30 recycles)
2024-07-12 20:49:02,615 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=56.9 pTM=0.402 ipTM=0.0923
2024-07-12 20:49:05,399 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=58.5 pTM=0.415 ipTM=0.12 tol=3.15
2024-07-12 20:49:08,182 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=58.7 pTM=0.421 ipTM=0.133 tol=3.64
2024-07-12 20:49:10,961 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=58.3 pTM=0.423 ipTM=0.148 tol=3.25
2024-07-12 20:49:13,744 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=57.6 pTM=0.424 ipTM=0.155 tol=1.43
2024-07-12 20:49:16,524 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=58.1 pTM=0.424 ipTM=0.152 tol=2.55
2024-07-12 20:49:19,308 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=58.1 pTM=0.422 ipTM=0.145 tol=1.49
2024-07-12 20:49:22,093 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=57.8 pTM=0.426 ipTM=0.156 tol=2.05
2024-07-12 20:49:24,878 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=57.6 pTM=0.427 ipTM=0.159 tol=1.97
2024-07-12 20:49:27,659 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=57.8 pTM=0.427 ipTM=0.169 tol=4.73
2024-07-12 20:49:30,441 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=57.7 pTM=0.426 ipTM=0.167 tol=1.13
2024-07-12 20:49:33,224 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=57.4 pTM=0.427 ipTM=0.175 tol=1.37
2024-07-12 20:49:36,006 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=58 pTM=0.425 ipTM=0.17 tol=1.84
2024-07-12 20:49:38,787 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=58 pTM=0.428 ipTM=0.178 tol=2.11
2024-07-12 20:49:41,568 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=57.5 pTM=0.427 ipTM=0.182 tol=1.84
2024-07-12 20:49:44,352 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=57.9 pTM=0.431 ipTM=0.187 tol=2.07
2024-07-12 20:49:47,133 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=58.1 pTM=0.427 ipTM=0.168 tol=2.15
2024-07-12 20:49:49,915 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=58 pTM=0.428 ipTM=0.172 tol=1.05
2024-07-12 20:49:52,700 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=57.7 pTM=0.43 ipTM=0.176 tol=1.12
2024-07-12 20:49:55,482 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=58 pTM=0.431 ipTM=0.184 tol=1.24
2024-07-12 20:49:58,268 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=57.9 pTM=0.43 ipTM=0.187 tol=1.68
2024-07-12 20:50:01,049 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=57.6 pTM=0.429 ipTM=0.188 tol=2.19
2024-07-12 20:50:03,829 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=57.8 pTM=0.429 ipTM=0.178 tol=1.39
2024-07-12 20:50:06,610 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=57.6 pTM=0.429 ipTM=0.181 tol=0.74
2024-07-12 20:50:09,393 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=57.9 pTM=0.425 ipTM=0.171 tol=1.41
2024-07-12 20:50:12,176 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=58.1 pTM=0.43 ipTM=0.182 tol=2.97
2024-07-12 20:50:14,961 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=57.9 pTM=0.432 ipTM=0.18 tol=1.04
2024-07-12 20:50:17,743 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=57.7 pTM=0.429 ipTM=0.175 tol=3.6
2024-07-12 20:50:20,521 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=57.4 pTM=0.43 ipTM=0.186 tol=1.62
2024-07-12 20:50:23,304 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=58.1 pTM=0.428 ipTM=0.171 tol=3.03
2024-07-12 20:50:26,089 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=57.7 pTM=0.429 ipTM=0.174 tol=2.7
2024-07-12 20:50:26,089 alphafold2_multimer_v3_model_3_seed_000 took 86.3s (30 recycles)
2024-07-12 20:50:28,953 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=58.6 pTM=0.4 ipTM=0.0758
2024-07-12 20:50:31,735 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=59 pTM=0.407 ipTM=0.0974 tol=3.94
2024-07-12 20:50:34,517 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=59.1 pTM=0.412 ipTM=0.111 tol=4.19
2024-07-12 20:50:37,299 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=58.8 pTM=0.411 ipTM=0.115 tol=4.26
2024-07-12 20:50:40,081 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=58.2 pTM=0.414 ipTM=0.129 tol=2.07
2024-07-12 20:50:42,865 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=58.7 pTM=0.411 ipTM=0.125 tol=2.61
2024-07-12 20:50:45,646 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=59.5 pTM=0.412 ipTM=0.122 tol=4.62
2024-07-12 20:50:48,427 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=59.1 pTM=0.414 ipTM=0.132 tol=3.98
2024-07-12 20:50:51,207 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=59.4 pTM=0.416 ipTM=0.136 tol=3.25
2024-07-12 20:50:53,992 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=59.3 pTM=0.417 ipTM=0.138 tol=2.36
2024-07-12 20:50:56,778 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=59 pTM=0.416 ipTM=0.135 tol=2.48
2024-07-12 20:50:59,563 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=58.7 pTM=0.414 ipTM=0.132 tol=2.16
2024-07-12 20:51:02,347 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=59.6 pTM=0.415 ipTM=0.131 tol=3.9
2024-07-12 20:51:05,126 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=60 pTM=0.413 ipTM=0.122 tol=2.6
2024-07-12 20:51:07,908 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=59.5 pTM=0.416 ipTM=0.129 tol=1.99
2024-07-12 20:51:10,692 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=58.9 pTM=0.418 ipTM=0.138 tol=3.61
2024-07-12 20:51:13,475 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=59.7 pTM=0.415 ipTM=0.123 tol=2.57
2024-07-12 20:51:16,257 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=59 pTM=0.414 ipTM=0.129 tol=2.47
2024-07-12 20:51:19,041 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=58.6 pTM=0.415 ipTM=0.137 tol=1.88
2024-07-12 20:51:21,822 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=59.5 pTM=0.415 ipTM=0.127 tol=1.71
2024-07-12 20:51:24,605 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=59 pTM=0.414 ipTM=0.127 tol=1.67
2024-07-12 20:51:27,389 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=58.8 pTM=0.414 ipTM=0.133 tol=2.56
2024-07-12 20:51:30,173 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=59.6 pTM=0.411 ipTM=0.119 tol=3.34
2024-07-12 20:51:32,955 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=58.8 pTM=0.414 ipTM=0.134 tol=1.86
2024-07-12 20:51:35,738 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=59.1 pTM=0.412 ipTM=0.131 tol=1.72
2024-07-12 20:51:38,518 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=59 pTM=0.416 ipTM=0.143 tol=2.65
2024-07-12 20:51:41,304 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=59 pTM=0.418 ipTM=0.144 tol=2.52
2024-07-12 20:51:44,086 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=58.6 pTM=0.414 ipTM=0.136 tol=1.9
2024-07-12 20:51:46,870 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=58.5 pTM=0.415 ipTM=0.139 tol=3.16
2024-07-12 20:51:49,649 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=59 pTM=0.414 ipTM=0.133 tol=4.93
2024-07-12 20:51:52,431 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=59.2 pTM=0.413 ipTM=0.13 tol=4.2
2024-07-12 20:51:52,431 alphafold2_multimer_v3_model_4_seed_000 took 86.3s (30 recycles)
2024-07-12 20:51:55,299 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=58.4 pTM=0.407 ipTM=0.0944
2024-07-12 20:51:58,079 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=59.1 pTM=0.412 ipTM=0.0969 tol=6.13
2024-07-12 20:52:00,857 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=59.8 pTM=0.418 ipTM=0.106 tol=3.67
2024-07-12 20:52:03,632 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=58.8 pTM=0.415 ipTM=0.108 tol=3.5
2024-07-12 20:52:06,410 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=58.2 pTM=0.413 ipTM=0.105 tol=2.11
2024-07-12 20:52:09,185 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=58.7 pTM=0.412 ipTM=0.0959 tol=2.05
2024-07-12 20:52:11,963 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=58.9 pTM=0.412 ipTM=0.0909 tol=3.29
2024-07-12 20:52:14,742 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=58.4 pTM=0.414 ipTM=0.0986 tol=1.38
2024-07-12 20:52:17,521 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=59.3 pTM=0.415 ipTM=0.0982 tol=6.02
2024-07-12 20:52:20,297 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=58.2 pTM=0.412 ipTM=0.0925 tol=4.86
2024-07-12 20:52:23,075 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=57.9 pTM=0.413 ipTM=0.102 tol=1.32
2024-07-12 20:52:25,848 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=57.8 pTM=0.415 ipTM=0.104 tol=2.81
2024-07-12 20:52:28,625 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=58.7 pTM=0.414 ipTM=0.1 tol=4.31
2024-07-12 20:52:31,402 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=58.9 pTM=0.417 ipTM=0.101 tol=4.62
2024-07-12 20:52:34,177 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=55.2 pTM=0.414 ipTM=0.1 tol=9.07
2024-07-12 20:52:36,960 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=57.6 pTM=0.415 ipTM=0.092 tol=7.25
2024-07-12 20:52:39,740 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=58.8 pTM=0.415 ipTM=0.0941 tol=3.2
2024-07-12 20:52:42,518 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=58.1 pTM=0.415 ipTM=0.102 tol=1.49
2024-07-12 20:52:45,298 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=58 pTM=0.416 ipTM=0.106 tol=1.33
2024-07-12 20:52:48,074 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=58.8 pTM=0.416 ipTM=0.103 tol=4.18
2024-07-12 20:52:50,853 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=58.3 pTM=0.416 ipTM=0.102 tol=3.48
2024-07-12 20:52:53,628 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=58 pTM=0.415 ipTM=0.107 tol=3.69
2024-07-12 20:52:56,405 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=58.7 pTM=0.413 ipTM=0.103 tol=2.78
2024-07-12 20:52:59,184 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=57.9 pTM=0.414 ipTM=0.102 tol=2.89
2024-07-12 20:53:01,962 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=59.3 pTM=0.413 ipTM=0.0942 tol=2.8
2024-07-12 20:53:04,739 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=58.6 pTM=0.415 ipTM=0.0978 tol=2.43
2024-07-12 20:53:07,515 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=58.3 pTM=0.417 ipTM=0.0996 tol=1.52
2024-07-12 20:53:10,292 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=57.8 pTM=0.416 ipTM=0.104 tol=3.06
2024-07-12 20:53:13,070 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=58.1 pTM=0.413 ipTM=0.0998 tol=3.77
2024-07-12 20:53:15,846 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=58 pTM=0.413 ipTM=0.0986 tol=2.02
2024-07-12 20:53:18,622 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=58.4 pTM=0.415 ipTM=0.0977 tol=1.71
2024-07-12 20:53:18,622 alphafold2_multimer_v3_model_5_seed_000 took 86.1s (30 recycles)
2024-07-12 20:53:21,415 reranking models by 'multimer' metric
2024-07-12 20:53:32,846 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 20:53:52,388 Relaxation took 31.0s
2024-07-12 20:53:52,388 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=57.7 pTM=0.429 ipTM=0.174
2024-07-12 20:54:02,691 Relaxation took 10.3s
2024-07-12 20:54:02,691 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=59.2 pTM=0.413 ipTM=0.13
2024-07-12 20:54:11,458 Relaxation took 8.8s
2024-07-12 20:54:11,458 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=58.1 pTM=0.417 ipTM=0.127
2024-07-12 20:54:18,156 Relaxation took 6.7s
2024-07-12 20:54:18,156 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=58.8 pTM=0.413 ipTM=0.105
2024-07-12 20:54:24,451 Relaxation took 6.3s
2024-07-12 20:54:24,451 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=58.4 pTM=0.415 ipTM=0.0977
2024-07-12 20:54:25,259 Done