2024-07-12 21:32:43,993 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-12 21:32:44,336 Running on GPU 2024-07-12 21:32:53,210 Found 6 citations for tools or databases 2024-07-12 21:32:53,210 Query 1/1: S27A5_TTC3 (length 2715) 2024-07-12 21:32:53,667 Sleeping for 7s. Reason: PENDING 2024-07-12 21:33:01,086 Sleeping for 8s. Reason: RUNNING 2024-07-12 21:33:09,505 Sleeping for 5s. Reason: RUNNING 2024-07-12 21:33:14,960 Sleeping for 9s. Reason: RUNNING 2024-07-12 21:33:24,434 Sleeping for 8s. Reason: RUNNING 2024-07-12 21:33:32,863 Sleeping for 8s. Reason: RUNNING 2024-07-12 21:33:41,278 Sleeping for 6s. Reason: RUNNING 2024-07-12 21:33:47,681 Sleeping for 9s. Reason: RUNNING 2024-07-12 21:33:57,131 Sleeping for 9s. Reason: RUNNING 2024-07-12 21:34:06,561 Sleeping for 8s. Reason: RUNNING 2024-07-12 21:34:14,976 Sleeping for 9s. Reason: RUNNING 2024-07-12 21:34:24,435 Sleeping for 5s. Reason: RUNNING 2024-07-12 21:34:29,857 Sleeping for 8s. Reason: RUNNING 2024-07-12 21:34:38,300 Sleeping for 5s. Reason: RUNNING 2024-07-12 21:34:43,735 Sleeping for 5s. Reason: RUNNING 2024-07-12 21:34:49,153 Sleeping for 6s. Reason: RUNNING 2024-07-12 21:34:55,571 Sleeping for 8s. Reason: RUNNING 2024-07-12 21:35:03,980 Sleeping for 9s. Reason: RUNNING 2024-07-12 21:35:13,400 Sleeping for 6s. Reason: RUNNING 2024-07-12 21:35:19,825 Sleeping for 5s. Reason: RUNNING 2024-07-12 21:35:25,250 Sleeping for 8s. Reason: RUNNING 2024-07-12 21:35:33,662 Sleeping for 10s. Reason: RUNNING 2024-07-12 21:35:44,093 Sleeping for 7s. Reason: RUNNING 2024-07-12 21:35:51,496 Sleeping for 7s. Reason: RUNNING 2024-07-12 21:35:58,925 Sleeping for 9s. Reason: RUNNING 2024-07-12 21:36:08,348 Sleeping for 7s. Reason: RUNNING 2024-07-12 21:36:15,781 Sleeping for 9s. Reason: RUNNING 2024-07-12 21:36:25,225 Sleeping for 9s. Reason: RUNNING 2024-07-12 21:36:34,639 Sleeping for 6s. Reason: RUNNING 2024-07-12 21:36:41,062 Sleeping for 10s. Reason: RUNNING 2024-07-12 21:36:51,488 Sleeping for 10s. Reason: RUNNING 2024-07-12 21:37:01,898 Sleeping for 6s. Reason: RUNNING 2024-07-12 21:37:08,332 Sleeping for 6s. Reason: RUNNING 2024-07-12 21:37:14,767 Sleeping for 9s. Reason: RUNNING 2024-07-12 21:37:24,200 Sleeping for 6s. Reason: RUNNING 2024-07-12 21:37:30,634 Sleeping for 5s. Reason: RUNNING 2024-07-12 21:37:36,044 Sleeping for 8s. Reason: RUNNING 2024-07-12 21:37:44,469 Sleeping for 6s. Reason: RUNNING 2024-07-12 21:37:50,895 Sleeping for 6s. Reason: RUNNING 2024-07-12 21:37:57,317 Sleeping for 8s. Reason: RUNNING 2024-07-12 21:38:05,744 Sleeping for 6s. Reason: RUNNING 2024-07-12 21:38:12,172 Sleeping for 10s. Reason: RUNNING 2024-07-12 21:38:22,601 Sleeping for 5s. Reason: RUNNING 2024-07-12 21:38:28,039 Sleeping for 10s. Reason: RUNNING 2024-07-12 21:38:38,450 Sleeping for 5s. Reason: RUNNING 2024-07-12 21:38:43,883 Sleeping for 8s. Reason: RUNNING 2024-07-12 21:38:52,301 Sleeping for 8s. Reason: RUNNING 2024-07-12 21:39:00,701 Sleeping for 9s. Reason: RUNNING 2024-07-12 21:39:10,121 Sleeping for 8s. Reason: RUNNING 2024-07-12 21:39:18,560 Sleeping for 8s. Reason: RUNNING 2024-07-12 21:39:27,014 Sleeping for 6s. Reason: RUNNING 2024-07-12 21:39:38,669 Sleeping for 5s. Reason: PENDING 2024-07-12 21:39:44,090 Sleeping for 6s. Reason: RUNNING 2024-07-12 21:39:50,508 Sleeping for 7s. Reason: RUNNING 2024-07-12 21:39:57,945 Sleeping for 5s. Reason: RUNNING 2024-07-12 21:40:03,376 Sleeping for 8s. Reason: RUNNING 2024-07-12 21:40:11,801 Sleeping for 10s. Reason: RUNNING 2024-07-12 21:40:22,242 Sleeping for 8s. Reason: RUNNING 2024-07-12 21:40:30,674 Sleeping for 8s. Reason: RUNNING 2024-07-12 21:40:39,105 Sleeping for 8s. Reason: RUNNING 2024-07-12 21:40:47,516 Sleeping for 6s. Reason: RUNNING 2024-07-12 21:40:53,953 Sleeping for 10s. Reason: RUNNING 2024-07-12 21:41:04,373 Sleeping for 9s. Reason: RUNNING 2024-07-12 21:41:13,790 Sleeping for 8s. Reason: RUNNING 2024-07-12 21:41:22,200 Sleeping for 5s. Reason: RUNNING 2024-07-12 21:41:27,617 Sleeping for 8s. Reason: RUNNING 2024-07-12 21:41:36,043 Sleeping for 9s. Reason: RUNNING 2024-07-12 21:41:45,486 Sleeping for 8s. Reason: RUNNING 2024-07-12 21:41:53,916 Sleeping for 10s. Reason: RUNNING 2024-07-12 21:42:04,333 Sleeping for 6s. Reason: RUNNING 2024-07-12 21:42:10,746 Sleeping for 10s. Reason: RUNNING 2024-07-12 21:42:21,171 Sleeping for 10s. Reason: RUNNING 2024-07-12 21:42:31,592 Sleeping for 6s. Reason: RUNNING 2024-07-12 21:42:38,022 Sleeping for 6s. Reason: RUNNING 2024-07-12 21:42:44,435 Sleeping for 7s. Reason: RUNNING 2024-07-12 21:42:51,884 Sleeping for 10s. Reason: RUNNING 2024-07-12 21:43:02,326 Sleeping for 10s. Reason: RUNNING 2024-07-12 21:43:12,751 Sleeping for 7s. Reason: RUNNING 2024-07-12 21:43:20,171 Sleeping for 6s. Reason: RUNNING 2024-07-12 21:43:26,597 Sleeping for 8s. Reason: RUNNING 2024-07-12 21:43:35,034 Sleeping for 9s. Reason: RUNNING 2024-07-12 21:43:44,497 Sleeping for 7s. Reason: RUNNING 2024-07-12 21:43:51,918 Sleeping for 5s. Reason: RUNNING 2024-07-12 21:43:57,350 Sleeping for 9s. Reason: RUNNING 2024-07-12 21:44:13,982 Setting max_seq=508, max_extra_seq=2048 2024-07-12 21:54:31,001 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=54.2 pTM=0.386 ipTM=0.285 2024-07-12 22:01:10,053 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=53.2 pTM=0.397 ipTM=0.399 tol=15.1 2024-07-12 22:07:48,942 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=53.8 pTM=0.402 ipTM=0.46 tol=11 2024-07-12 22:14:27,796 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=53.7 pTM=0.406 ipTM=0.5 tol=8.84 2024-07-12 22:21:06,915 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=53.1 pTM=0.395 ipTM=0.426 tol=7.55 2024-07-12 22:27:46,017 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=53.2 pTM=0.396 ipTM=0.482 tol=4.82 2024-07-12 22:34:25,083 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=53 pTM=0.393 ipTM=0.462 tol=4.54 2024-07-12 22:41:04,270 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=52.9 pTM=0.393 ipTM=0.479 tol=4.43 2024-07-12 22:47:43,471 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=52.5 pTM=0.388 ipTM=0.417 tol=7.38 2024-07-12 22:54:22,696 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=52.4 pTM=0.388 ipTM=0.432 tol=5.82 2024-07-12 23:01:01,953 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=52.4 pTM=0.39 ipTM=0.454 tol=7.48 2024-07-12 23:07:41,164 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=52.4 pTM=0.39 ipTM=0.457 tol=6.89 2024-07-12 23:14:20,274 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=52.3 pTM=0.389 ipTM=0.464 tol=6.16 2024-07-12 23:20:59,477 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=52.1 pTM=0.387 ipTM=0.403 tol=7.05 2024-07-12 23:27:38,679 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=52.2 pTM=0.386 ipTM=0.377 tol=5.18 2024-07-12 23:34:17,761 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=52 pTM=0.388 ipTM=0.403 tol=7.04 2024-07-12 23:40:56,814 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=52.6 pTM=0.391 ipTM=0.465 tol=5.69 2024-07-12 23:47:35,874 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=52.3 pTM=0.39 ipTM=0.473 tol=3.79 2024-07-12 23:54:14,982 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=52.4 pTM=0.391 ipTM=0.464 tol=5.59 2024-07-13 00:00:54,082 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=52.5 pTM=0.39 ipTM=0.472 tol=4.78 2024-07-13 00:07:33,164 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=52.6 pTM=0.391 ipTM=0.458 tol=3.35 2024-07-13 00:14:12,195 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=52.4 pTM=0.39 ipTM=0.459 tol=3.54 2024-07-13 00:20:51,321 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=52.6 pTM=0.393 ipTM=0.488 tol=2.92 2024-07-13 00:27:30,369 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=52.6 pTM=0.394 ipTM=0.506 tol=3 2024-07-13 00:34:09,458 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=52.8 pTM=0.394 ipTM=0.506 tol=6.55 2024-07-13 00:40:49,179 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=52.4 pTM=0.391 ipTM=0.461 tol=6.21 2024-07-13 00:47:28,241 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=52.5 pTM=0.39 ipTM=0.429 tol=3.43 2024-07-13 00:54:07,327 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=52.3 pTM=0.391 ipTM=0.456 tol=4.12 2024-07-13 01:00:46,452 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=52.2 pTM=0.391 ipTM=0.448 tol=5.02 2024-07-13 01:07:25,561 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=52.2 pTM=0.39 ipTM=0.434 tol=5.81 2024-07-13 01:14:04,625 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=52.2 pTM=0.39 ipTM=0.416 tol=4.8 2024-07-13 01:14:04,629 alphafold2_multimer_v3_model_1_seed_000 took 12558.2s (30 recycles) 2024-07-13 01:20:51,086 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=53.6 pTM=0.385 ipTM=0.306 2024-07-13 01:27:30,540 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=55.2 pTM=0.401 ipTM=0.486 tol=17.2 2024-07-13 01:34:09,976 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=54.8 pTM=0.384 ipTM=0.392 tol=17.6 2024-07-13 01:40:49,491 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=54.8 pTM=0.383 ipTM=0.355 tol=10.4 2024-07-13 01:47:29,097 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=54.7 pTM=0.377 ipTM=0.318 tol=9.79 2024-07-13 01:54:08,746 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=54.8 pTM=0.376 ipTM=0.289 tol=9.02 2024-07-13 02:00:48,458 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=54.8 pTM=0.374 ipTM=0.272 tol=9.04 2024-07-13 02:07:28,070 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=54.8 pTM=0.375 ipTM=0.253 tol=7.92 2024-07-13 02:14:07,716 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=54.9 pTM=0.374 ipTM=0.244 tol=6.91 2024-07-13 02:20:47,309 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=54.8 pTM=0.374 ipTM=0.238 tol=7.77 2024-07-13 02:27:26,845 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=54.8 pTM=0.374 ipTM=0.237 tol=7.48 2024-07-13 02:34:06,402 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=55 pTM=0.374 ipTM=0.231 tol=8.05 2024-07-13 02:40:45,902 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=54.8 pTM=0.374 ipTM=0.23 tol=6.74 2024-07-13 02:47:25,578 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=54.8 pTM=0.373 ipTM=0.23 tol=5.59 2024-07-13 02:54:05,223 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=54.8 pTM=0.373 ipTM=0.227 tol=6.89 2024-07-13 03:00:44,803 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=54.8 pTM=0.374 ipTM=0.228 tol=5.79 2024-07-13 03:07:24,338 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=54.9 pTM=0.373 ipTM=0.228 tol=7.12 2024-07-13 03:14:03,969 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=54.7 pTM=0.373 ipTM=0.227 tol=5.18 2024-07-13 03:20:43,595 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=54.8 pTM=0.373 ipTM=0.229 tol=4.59 2024-07-13 03:27:23,243 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=54.6 pTM=0.372 ipTM=0.227 tol=5.04 2024-07-13 03:34:02,859 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=54.8 pTM=0.373 ipTM=0.228 tol=4.41 2024-07-13 03:40:42,498 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=54.6 pTM=0.372 ipTM=0.228 tol=4.25 2024-07-13 03:47:22,130 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54.6 pTM=0.372 ipTM=0.227 tol=7.27 2024-07-13 03:54:01,713 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=54.6 pTM=0.372 ipTM=0.227 tol=4.82 2024-07-13 04:00:41,226 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=54.6 pTM=0.373 ipTM=0.227 tol=6.52 2024-07-13 04:07:20,802 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=54.8 pTM=0.374 ipTM=0.226 tol=9.18 2024-07-13 04:14:00,375 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=54.9 pTM=0.374 ipTM=0.224 tol=5.96 2024-07-13 04:20:39,933 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=54.6 pTM=0.374 ipTM=0.227 tol=5.97 2024-07-13 04:27:19,517 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=54.7 pTM=0.374 ipTM=0.229 tol=7.59 2024-07-13 04:33:59,102 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=54.7 pTM=0.373 ipTM=0.227 tol=5.85 2024-07-13 04:40:38,685 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=54.6 pTM=0.372 ipTM=0.227 tol=3.81 2024-07-13 04:40:38,689 alphafold2_multimer_v3_model_2_seed_000 took 12387.2s (30 recycles) 2024-07-13 04:47:24,451 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=53.2 pTM=0.387 ipTM=0.249 2024-07-13 04:54:04,639 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=53.6 pTM=0.383 ipTM=0.242 tol=22.6 2024-07-13 05:00:44,739 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=53.5 pTM=0.379 ipTM=0.242 tol=15.8 2024-07-13 05:07:24,694 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=53.2 pTM=0.378 ipTM=0.248 tol=10 2024-07-13 05:14:04,629 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=52.9 pTM=0.376 ipTM=0.246 tol=8.34 2024-07-13 05:20:44,553 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=53.1 pTM=0.376 ipTM=0.248 tol=7.94 2024-07-13 05:27:24,594 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=53 pTM=0.374 ipTM=0.256 tol=12.6 2024-07-13 05:34:04,702 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=53.1 pTM=0.377 ipTM=0.253 tol=9.57 2024-07-13 05:40:44,719 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=53 pTM=0.375 ipTM=0.252 tol=8.95 2024-07-13 05:47:24,653 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=53.2 pTM=0.379 ipTM=0.283 tol=9.14 2024-07-13 05:54:04,576 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=53.4 pTM=0.38 ipTM=0.292 tol=11.7 2024-07-13 06:00:44,468 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=53.8 pTM=0.385 ipTM=0.325 tol=7.36 2024-07-13 06:07:24,226 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=53.8 pTM=0.386 ipTM=0.36 tol=5.23 2024-07-13 06:14:03,960 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=53.9 pTM=0.389 ipTM=0.384 tol=4.06 2024-07-13 06:20:43,718 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=53.9 pTM=0.389 ipTM=0.406 tol=4.86 2024-07-13 06:27:23,410 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=53.9 pTM=0.388 ipTM=0.363 tol=3.87 2024-07-13 06:34:03,094 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=53.9 pTM=0.388 ipTM=0.371 tol=3.48 2024-07-13 06:40:42,697 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=53.8 pTM=0.388 ipTM=0.38 tol=3.28 2024-07-13 06:47:22,308 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=53.8 pTM=0.389 ipTM=0.384 tol=2.72 2024-07-13 06:54:01,952 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=53.6 pTM=0.387 ipTM=0.36 tol=2.81 2024-07-13 07:00:41,623 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=53.7 pTM=0.388 ipTM=0.362 tol=3.01 2024-07-13 07:07:21,243 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=53.8 pTM=0.39 ipTM=0.411 tol=3.1 2024-07-13 07:14:00,889 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=53.8 pTM=0.392 ipTM=0.414 tol=4.61 2024-07-13 07:20:40,566 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=53.6 pTM=0.387 ipTM=0.355 tol=4.02 2024-07-13 07:27:20,187 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=53.7 pTM=0.389 ipTM=0.382 tol=2.43 2024-07-13 07:33:59,845 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=53.8 pTM=0.389 ipTM=0.369 tol=1.82 2024-07-13 07:40:39,569 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=53.8 pTM=0.39 ipTM=0.381 tol=2.68 2024-07-13 07:47:19,150 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=53.7 pTM=0.39 ipTM=0.372 tol=2.91 2024-07-13 07:53:58,876 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=53.7 pTM=0.387 ipTM=0.37 tol=3.64 2024-07-13 08:00:38,594 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=53.8 pTM=0.388 ipTM=0.369 tol=3.49 2024-07-13 08:07:18,291 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=53.7 pTM=0.389 ipTM=0.378 tol=2.92 2024-07-13 08:07:18,295 alphafold2_multimer_v3_model_3_seed_000 took 12394.0s (30 recycles) 2024-07-13 08:14:03,088 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=52.5 pTM=0.376 ipTM=0.258 2024-07-13 08:20:43,681 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=52.5 pTM=0.378 ipTM=0.348 tol=18.5 2024-07-13 08:27:24,519 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=52.3 pTM=0.379 ipTM=0.296 tol=16.3 2024-07-13 08:34:05,320 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=51.8 pTM=0.37 ipTM=0.26 tol=18.4 2024-07-13 08:40:46,218 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=52 pTM=0.373 ipTM=0.25 tol=14.9 2024-07-13 08:47:27,113 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=51.8 pTM=0.367 ipTM=0.254 tol=16.5 2024-07-13 08:54:08,082 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=51.9 pTM=0.37 ipTM=0.252 tol=15.4 2024-07-13 09:00:48,968 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=52 pTM=0.366 ipTM=0.253 tol=15.6 2024-07-13 09:07:29,712 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=52.4 pTM=0.369 ipTM=0.242 tol=13.3 2024-07-13 09:14:10,421 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=52.3 pTM=0.365 ipTM=0.247 tol=11.3 2024-07-13 09:20:51,078 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=52.5 pTM=0.37 ipTM=0.25 tol=8.02 2024-07-13 09:27:31,758 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=52.4 pTM=0.365 ipTM=0.247 tol=9.12 2024-07-13 09:34:12,502 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=52.5 pTM=0.37 ipTM=0.271 tol=13 2024-07-13 09:40:53,331 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=52.4 pTM=0.365 ipTM=0.25 tol=12.4 2024-07-13 09:47:34,149 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=52.6 pTM=0.367 ipTM=0.252 tol=11.3 2024-07-13 09:54:14,988 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=52.7 pTM=0.368 ipTM=0.283 tol=8.3 2024-07-13 10:00:55,835 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=52.7 pTM=0.367 ipTM=0.252 tol=13 2024-07-13 10:07:36,709 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=52.8 pTM=0.364 ipTM=0.255 tol=12.3 2024-07-13 10:14:17,534 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=52.6 pTM=0.368 ipTM=0.253 tol=9.74 2024-07-13 10:20:58,464 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=52.6 pTM=0.364 ipTM=0.253 tol=8.73 2024-07-13 10:27:39,315 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=52.7 pTM=0.368 ipTM=0.249 tol=9.18 2024-07-13 10:34:20,149 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=52.5 pTM=0.365 ipTM=0.251 tol=10.2 2024-07-13 10:41:01,040 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=52.8 pTM=0.369 ipTM=0.253 tol=6.83 2024-07-13 10:47:41,938 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=52.6 pTM=0.366 ipTM=0.252 tol=5.32 2024-07-13 10:54:22,675 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=52.8 pTM=0.369 ipTM=0.253 tol=11.1 2024-07-13 11:01:03,486 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=52.9 pTM=0.367 ipTM=0.252 tol=8.86 2024-07-13 11:07:44,301 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=52.8 pTM=0.368 ipTM=0.252 tol=7.96 2024-07-13 11:14:24,989 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=52.8 pTM=0.367 ipTM=0.253 tol=10.3 2024-07-13 11:21:05,798 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=53.1 pTM=0.368 ipTM=0.25 tol=8.15 2024-07-13 11:27:46,633 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=53 pTM=0.366 ipTM=0.254 tol=7.54 2024-07-13 11:34:27,456 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=52.9 pTM=0.368 ipTM=0.252 tol=6.86 2024-07-13 11:34:27,460 alphafold2_multimer_v3_model_4_seed_000 took 12425.0s (30 recycles) 2024-07-13 11:41:11,676 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=51.9 pTM=0.375 ipTM=0.228 2024-07-13 11:47:51,653 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=51.8 pTM=0.369 ipTM=0.236 tol=16.1 2024-07-13 11:54:31,554 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=52.1 pTM=0.379 ipTM=0.241 tol=12.3 2024-07-13 12:01:11,474 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=51.9 pTM=0.37 ipTM=0.247 tol=12.4 2024-07-13 12:07:51,419 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=52.2 pTM=0.378 ipTM=0.243 tol=15.7 2024-07-13 12:14:31,372 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=51.9 pTM=0.37 ipTM=0.243 tol=11.6 2024-07-13 12:21:11,422 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=52.4 pTM=0.377 ipTM=0.247 tol=8.67 2024-07-13 12:27:51,372 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=52.2 pTM=0.37 ipTM=0.248 tol=13.5 2024-07-13 12:34:31,376 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=52.5 pTM=0.376 ipTM=0.248 tol=9.33 2024-07-13 12:41:11,248 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=52.2 pTM=0.371 ipTM=0.249 tol=12.1 2024-07-13 12:47:51,061 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=52.5 pTM=0.377 ipTM=0.246 tol=7.72 2024-07-13 12:54:30,869 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=52.2 pTM=0.371 ipTM=0.25 tol=6.72 2024-07-13 13:01:10,760 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=52.3 pTM=0.376 ipTM=0.247 tol=10.9 2024-07-13 13:07:50,553 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=51.9 pTM=0.37 ipTM=0.251 tol=12.5 2024-07-13 13:14:30,532 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=52.3 pTM=0.375 ipTM=0.249 tol=9.21 2024-07-13 13:21:10,421 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=52.1 pTM=0.372 ipTM=0.25 tol=12.1 2024-07-13 13:27:50,461 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=52.3 pTM=0.376 ipTM=0.246 tol=10.7 2024-07-13 13:34:30,512 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=51.8 pTM=0.37 ipTM=0.249 tol=9.97 2024-07-13 13:41:10,451 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=52.2 pTM=0.377 ipTM=0.247 tol=13 2024-07-13 13:47:50,375 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=51.6 pTM=0.368 ipTM=0.251 tol=10.2 2024-07-13 13:54:30,323 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=52.3 pTM=0.377 ipTM=0.246 tol=10.6 2024-07-13 14:01:10,169 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=52.1 pTM=0.372 ipTM=0.246 tol=10.3 2024-07-13 14:07:50,106 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=52.2 pTM=0.377 ipTM=0.252 tol=7.95 2024-07-13 14:14:29,881 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=52.1 pTM=0.372 ipTM=0.251 tol=11.6 2024-07-13 14:21:09,861 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=52.2 pTM=0.376 ipTM=0.249 tol=6.88 2024-07-13 14:27:49,727 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=52.1 pTM=0.372 ipTM=0.25 tol=10.8 2024-07-13 14:34:29,573 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=52 pTM=0.376 ipTM=0.251 tol=11.2 2024-07-13 14:41:09,483 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=52.1 pTM=0.374 ipTM=0.256 tol=10.5 2024-07-13 14:47:49,347 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=52.2 pTM=0.375 ipTM=0.253 tol=13.8 2024-07-13 14:54:29,171 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=52.1 pTM=0.373 ipTM=0.257 tol=9.76 2024-07-13 15:01:09,029 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=52.3 pTM=0.377 ipTM=0.257 tol=10.3 2024-07-13 15:01:09,033 alphafold2_multimer_v3_model_5_seed_000 took 12397.4s (30 recycles) 2024-07-13 15:01:13,879 reranking models by 'multimer' metric 2024-07-13 15:01:16,815 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-13 15:16:17,353 Relaxation took 903.5s 2024-07-13 15:16:17,353 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=52.2 pTM=0.39 ipTM=0.416 2024-07-13 15:26:04,445 Relaxation took 587.1s 2024-07-13 15:26:04,446 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=53.7 pTM=0.389 ipTM=0.378 2024-07-13 15:38:23,744 Relaxation took 739.3s 2024-07-13 15:38:23,744 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=52.3 pTM=0.377 ipTM=0.257 2024-07-13 15:47:42,681 Relaxation took 558.9s 2024-07-13 15:47:42,681 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=52.9 pTM=0.368 ipTM=0.252 2024-07-13 16:04:06,834 Relaxation took 984.2s 2024-07-13 16:04:06,834 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=54.6 pTM=0.372 ipTM=0.227 2024-07-13 16:04:20,967 Done