2024-07-12 22:11:29,801 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-12 22:11:30,133 Running on GPU
2024-07-12 22:11:44,614 Found 6 citations for tools or databases
2024-07-12 22:11:44,614 Query 1/1: S39A7_PG12B (length 664)
2024-07-12 22:11:45,063 Sleeping for 5s. Reason: PENDING
2024-07-12 22:11:50,473 Sleeping for 7s. Reason: RUNNING
2024-07-12 22:11:57,890 Sleeping for 10s. Reason: RUNNING
2024-07-12 22:12:08,340 Sleeping for 9s. Reason: RUNNING
2024-07-12 22:12:17,766 Sleeping for 9s. Reason: RUNNING
2024-07-12 22:12:27,182 Sleeping for 10s. Reason: RUNNING
2024-07-12 22:12:39,256 Sleeping for 5s. Reason: PENDING
2024-07-12 22:12:44,687 Sleeping for 7s. Reason: RUNNING
2024-07-12 22:12:52,126 Sleeping for 6s. Reason: RUNNING
2024-07-12 22:12:58,533 Sleeping for 5s. Reason: RUNNING
2024-07-12 22:13:03,936 Sleeping for 7s. Reason: RUNNING
2024-07-12 22:13:13,590 Setting max_seq=508, max_extra_seq=2048
2024-07-12 22:16:04,195 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=51 pTM=0.426 ipTM=0.135
2024-07-12 22:16:12,556 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=49.4 pTM=0.372 ipTM=0.122 tol=8.12
2024-07-12 22:16:20,929 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=48.5 pTM=0.353 ipTM=0.129 tol=3.81
2024-07-12 22:16:29,314 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=49.9 pTM=0.383 ipTM=0.136 tol=2.9
2024-07-12 22:16:37,704 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=49.9 pTM=0.372 ipTM=0.133 tol=1.84
2024-07-12 22:16:46,101 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=50.5 pTM=0.389 ipTM=0.138 tol=1.77
2024-07-12 22:16:54,506 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=49.8 pTM=0.37 ipTM=0.131 tol=1.85
2024-07-12 22:17:02,914 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=49.9 pTM=0.383 ipTM=0.136 tol=1.36
2024-07-12 22:17:11,328 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=49.5 pTM=0.366 ipTM=0.129 tol=1.79
2024-07-12 22:17:19,748 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=49.5 pTM=0.378 ipTM=0.135 tol=1.47
2024-07-12 22:17:28,175 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=49.1 pTM=0.367 ipTM=0.131 tol=3.55
2024-07-12 22:17:36,606 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=49.6 pTM=0.376 ipTM=0.132 tol=2.56
2024-07-12 22:17:45,041 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=49.3 pTM=0.362 ipTM=0.13 tol=2.28
2024-07-12 22:17:53,476 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=49.6 pTM=0.372 ipTM=0.131 tol=2.15
2024-07-12 22:18:01,915 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=49.6 pTM=0.362 ipTM=0.13 tol=0.91
2024-07-12 22:18:10,358 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=50 pTM=0.38 ipTM=0.135 tol=1.06
2024-07-12 22:18:18,803 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=49.3 pTM=0.364 ipTM=0.134 tol=1.94
2024-07-12 22:18:27,243 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=49.9 pTM=0.375 ipTM=0.134 tol=2.05
2024-07-12 22:18:35,682 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=49.1 pTM=0.362 ipTM=0.135 tol=2.38
2024-07-12 22:18:44,111 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=49.7 pTM=0.375 ipTM=0.135 tol=2.6
2024-07-12 22:18:52,556 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=48.9 pTM=0.361 ipTM=0.135 tol=1.84
2024-07-12 22:19:00,999 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=49.5 pTM=0.375 ipTM=0.136 tol=1.58
2024-07-12 22:19:09,446 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=49.2 pTM=0.365 ipTM=0.135 tol=2.4
2024-07-12 22:19:17,887 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=49.7 pTM=0.373 ipTM=0.134 tol=1.74
2024-07-12 22:19:26,329 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=49.1 pTM=0.356 ipTM=0.133 tol=0.978
2024-07-12 22:19:34,773 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=47.6 pTM=0.377 ipTM=0.134 tol=8.8
2024-07-12 22:19:43,220 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=48.6 pTM=0.357 ipTM=0.127 tol=7.01
2024-07-12 22:19:51,662 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=49.9 pTM=0.373 ipTM=0.134 tol=2.31
2024-07-12 22:20:00,109 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=49.5 pTM=0.363 ipTM=0.138 tol=2.02
2024-07-12 22:20:08,550 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=50.8 pTM=0.379 ipTM=0.141 tol=2.86
2024-07-12 22:20:16,988 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=50 pTM=0.361 ipTM=0.139 tol=1.53
2024-07-12 22:20:16,989 alphafold2_multimer_v3_model_1_seed_000 took 370.2s (30 recycles)
2024-07-12 22:20:25,694 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=44.6 pTM=0.361 ipTM=0.147
2024-07-12 22:20:34,124 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=45.8 pTM=0.362 ipTM=0.126 tol=12.8
2024-07-12 22:20:42,560 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=45.4 pTM=0.34 ipTM=0.119 tol=9.48
2024-07-12 22:20:50,992 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=46.4 pTM=0.357 ipTM=0.121 tol=6.03
2024-07-12 22:20:59,437 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=47 pTM=0.352 ipTM=0.118 tol=8.45
2024-07-12 22:21:07,882 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=47.5 pTM=0.367 ipTM=0.12 tol=3.71
2024-07-12 22:21:16,330 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=46.9 pTM=0.352 ipTM=0.12 tol=3.71
2024-07-12 22:21:24,775 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=48.3 pTM=0.371 ipTM=0.12 tol=3.96
2024-07-12 22:21:33,222 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=47.4 pTM=0.357 ipTM=0.119 tol=3.38
2024-07-12 22:21:41,660 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=48.3 pTM=0.373 ipTM=0.12 tol=3.18
2024-07-12 22:21:50,110 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=48.1 pTM=0.359 ipTM=0.116 tol=3.55
2024-07-12 22:21:58,561 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=49.5 pTM=0.379 ipTM=0.116 tol=3.95
2024-07-12 22:22:07,011 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=49 pTM=0.362 ipTM=0.113 tol=2.71
2024-07-12 22:22:15,456 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=49.1 pTM=0.375 ipTM=0.115 tol=2.18
2024-07-12 22:22:23,910 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=48.9 pTM=0.361 ipTM=0.112 tol=2.67
2024-07-12 22:22:32,358 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=49.4 pTM=0.379 ipTM=0.116 tol=2.51
2024-07-12 22:22:40,807 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=48.8 pTM=0.36 ipTM=0.112 tol=3.03
2024-07-12 22:22:49,252 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=49.2 pTM=0.374 ipTM=0.115 tol=2.03
2024-07-12 22:22:57,701 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=48.6 pTM=0.355 ipTM=0.113 tol=1.68
2024-07-12 22:23:06,155 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=48.8 pTM=0.37 ipTM=0.115 tol=2.2
2024-07-12 22:23:14,609 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=48.3 pTM=0.356 ipTM=0.113 tol=1.93
2024-07-12 22:23:23,061 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=48.3 pTM=0.365 ipTM=0.115 tol=3.33
2024-07-12 22:23:31,521 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=48.2 pTM=0.354 ipTM=0.114 tol=1.96
2024-07-12 22:23:39,971 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=48.9 pTM=0.369 ipTM=0.115 tol=2.55
2024-07-12 22:23:48,431 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=48.1 pTM=0.352 ipTM=0.113 tol=1.56
2024-07-12 22:23:56,894 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=48.1 pTM=0.364 ipTM=0.113 tol=2.18
2024-07-12 22:24:05,355 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=48.1 pTM=0.353 ipTM=0.114 tol=1.69
2024-07-12 22:24:13,820 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=48.1 pTM=0.36 ipTM=0.116 tol=4.16
2024-07-12 22:24:22,289 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=48.4 pTM=0.358 ipTM=0.117 tol=6.51
2024-07-12 22:24:30,743 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=49.2 pTM=0.376 ipTM=0.118 tol=2.5
2024-07-12 22:24:39,208 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=48.2 pTM=0.359 ipTM=0.114 tol=2.78
2024-07-12 22:24:39,209 alphafold2_multimer_v3_model_2_seed_000 took 261.9s (30 recycles)
2024-07-12 22:24:47,986 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=45.1 pTM=0.369 ipTM=0.137
2024-07-12 22:24:56,473 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=45.7 pTM=0.359 ipTM=0.141 tol=7.75
2024-07-12 22:25:04,973 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=48.8 pTM=0.4 ipTM=0.135 tol=8.12
2024-07-12 22:25:13,460 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=48.3 pTM=0.386 ipTM=0.139 tol=4.28
2024-07-12 22:25:21,945 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=47.9 pTM=0.381 ipTM=0.142 tol=2.54
2024-07-12 22:25:30,424 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=48 pTM=0.38 ipTM=0.139 tol=2.76
2024-07-12 22:25:38,905 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=47.8 pTM=0.368 ipTM=0.142 tol=2.26
2024-07-12 22:25:47,377 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=47.9 pTM=0.365 ipTM=0.143 tol=2.08
2024-07-12 22:25:55,851 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=49 pTM=0.39 ipTM=0.143 tol=2.44
2024-07-12 22:26:04,337 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=48.3 pTM=0.377 ipTM=0.141 tol=1.54
2024-07-12 22:26:12,808 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=48.8 pTM=0.394 ipTM=0.144 tol=3.25
2024-07-12 22:26:21,282 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=48.7 pTM=0.373 ipTM=0.143 tol=1.66
2024-07-12 22:26:29,789 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=47.7 pTM=0.367 ipTM=0.146 tol=2.07
2024-07-12 22:26:38,270 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=49 pTM=0.389 ipTM=0.145 tol=2.02
2024-07-12 22:26:46,737 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=48.7 pTM=0.373 ipTM=0.148 tol=1.3
2024-07-12 22:26:55,217 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=47.9 pTM=0.369 ipTM=0.146 tol=1.37
2024-07-12 22:27:03,690 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=48.2 pTM=0.369 ipTM=0.152 tol=0.697
2024-07-12 22:27:12,163 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=47.9 pTM=0.372 ipTM=0.148 tol=1.1
2024-07-12 22:27:20,631 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=48 pTM=0.37 ipTM=0.154 tol=1.6
2024-07-12 22:27:29,104 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=48.5 pTM=0.388 ipTM=0.156 tol=2.52
2024-07-12 22:27:37,579 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=48.2 pTM=0.378 ipTM=0.15 tol=1.27
2024-07-12 22:27:46,057 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=48.8 pTM=0.396 ipTM=0.154 tol=2.85
2024-07-12 22:27:54,533 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=48.4 pTM=0.376 ipTM=0.154 tol=1.59
2024-07-12 22:28:03,002 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=48.1 pTM=0.377 ipTM=0.157 tol=2.21
2024-07-12 22:28:11,474 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=48.2 pTM=0.377 ipTM=0.154 tol=1.35
2024-07-12 22:28:19,951 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=49.3 pTM=0.403 ipTM=0.154 tol=2.85
2024-07-12 22:28:28,419 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=48.5 pTM=0.379 ipTM=0.156 tol=1.46
2024-07-12 22:28:36,888 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=48.6 pTM=0.39 ipTM=0.16 tol=2.56
2024-07-12 22:28:45,364 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=48.1 pTM=0.377 ipTM=0.156 tol=1.05
2024-07-12 22:28:53,834 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=49.2 pTM=0.393 ipTM=0.155 tol=3.18
2024-07-12 22:29:02,305 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=48 pTM=0.374 ipTM=0.157 tol=1.35
2024-07-12 22:29:02,305 alphafold2_multimer_v3_model_3_seed_000 took 262.8s (30 recycles)
2024-07-12 22:29:11,053 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=45.8 pTM=0.394 ipTM=0.139
2024-07-12 22:29:19,538 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=48.2 pTM=0.377 ipTM=0.124 tol=11.5
2024-07-12 22:29:28,013 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=50.4 pTM=0.408 ipTM=0.155 tol=10
2024-07-12 22:29:36,490 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=49.8 pTM=0.397 ipTM=0.147 tol=5.01
2024-07-12 22:29:45,004 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=50.2 pTM=0.4 ipTM=0.167 tol=2.71
2024-07-12 22:29:53,483 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=50.1 pTM=0.394 ipTM=0.14 tol=2.64
2024-07-12 22:30:01,961 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=50.6 pTM=0.396 ipTM=0.165 tol=3.46
2024-07-12 22:30:10,446 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=50.6 pTM=0.39 ipTM=0.134 tol=2.52
2024-07-12 22:30:18,938 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=51.2 pTM=0.399 ipTM=0.163 tol=3.82
2024-07-12 22:30:27,411 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=50.7 pTM=0.392 ipTM=0.132 tol=3.78
2024-07-12 22:30:35,894 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=50.9 pTM=0.398 ipTM=0.16 tol=2.22
2024-07-12 22:30:44,374 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=51 pTM=0.392 ipTM=0.132 tol=1.98
2024-07-12 22:30:52,849 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=51.1 pTM=0.394 ipTM=0.152 tol=3
2024-07-12 22:31:01,326 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=51.1 pTM=0.392 ipTM=0.133 tol=2.19
2024-07-12 22:31:09,803 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=51.3 pTM=0.396 ipTM=0.152 tol=2.81
2024-07-12 22:31:18,283 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=50.7 pTM=0.392 ipTM=0.133 tol=3.86
2024-07-12 22:31:26,765 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=50.8 pTM=0.393 ipTM=0.153 tol=3.14
2024-07-12 22:31:35,242 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=50.6 pTM=0.387 ipTM=0.131 tol=3.37
2024-07-12 22:31:43,733 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=51 pTM=0.393 ipTM=0.156 tol=3.09
2024-07-12 22:31:52,210 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=50.6 pTM=0.386 ipTM=0.13 tol=2.07
2024-07-12 22:32:00,688 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=50.9 pTM=0.392 ipTM=0.154 tol=3.13
2024-07-12 22:32:09,176 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=50.9 pTM=0.389 ipTM=0.127 tol=2.61
2024-07-12 22:32:17,662 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=50.9 pTM=0.394 ipTM=0.151 tol=1.97
2024-07-12 22:32:26,137 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=50.9 pTM=0.388 ipTM=0.13 tol=2.3
2024-07-12 22:32:34,619 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=51.6 pTM=0.399 ipTM=0.166 tol=2.73
2024-07-12 22:32:43,106 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=50.9 pTM=0.393 ipTM=0.129 tol=2.53
2024-07-12 22:32:51,592 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=51.1 pTM=0.397 ipTM=0.151 tol=3.5
2024-07-12 22:33:00,067 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=51.2 pTM=0.395 ipTM=0.133 tol=2.66
2024-07-12 22:33:08,543 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=51.4 pTM=0.396 ipTM=0.154 tol=2.73
2024-07-12 22:33:17,024 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=51.4 pTM=0.394 ipTM=0.131 tol=2.8
2024-07-12 22:33:25,503 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=51.7 pTM=0.396 ipTM=0.157 tol=2.29
2024-07-12 22:33:25,503 alphafold2_multimer_v3_model_4_seed_000 took 262.9s (30 recycles)
2024-07-12 22:33:34,268 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=43.2 pTM=0.342 ipTM=0.13
2024-07-12 22:33:42,750 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=45.2 pTM=0.342 ipTM=0.116 tol=9.45
2024-07-12 22:33:51,236 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=46.6 pTM=0.348 ipTM=0.116 tol=9.82
2024-07-12 22:33:59,726 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=46.5 pTM=0.331 ipTM=0.117 tol=6.53
2024-07-12 22:34:08,216 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=46.6 pTM=0.343 ipTM=0.115 tol=3.4
2024-07-12 22:34:16,703 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=47.5 pTM=0.363 ipTM=0.123 tol=5.01
2024-07-12 22:34:25,185 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=49.2 pTM=0.389 ipTM=0.119 tol=4.4
2024-07-12 22:34:33,662 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=47.2 pTM=0.351 ipTM=0.124 tol=2.76
2024-07-12 22:34:42,145 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=47.7 pTM=0.35 ipTM=0.122 tol=3.9
2024-07-12 22:34:50,629 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=47 pTM=0.35 ipTM=0.12 tol=4.5
2024-07-12 22:34:59,113 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=46.7 pTM=0.338 ipTM=0.121 tol=4.76
2024-07-12 22:35:07,601 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=46.9 pTM=0.335 ipTM=0.117 tol=3.41
2024-07-12 22:35:16,090 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=46.8 pTM=0.334 ipTM=0.117 tol=2.81
2024-07-12 22:35:24,575 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=46.4 pTM=0.333 ipTM=0.122 tol=5.41
2024-07-12 22:35:33,063 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=47.2 pTM=0.336 ipTM=0.116 tol=4.18
2024-07-12 22:35:41,546 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=46.2 pTM=0.333 ipTM=0.118 tol=3.25
2024-07-12 22:35:50,035 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=46.5 pTM=0.354 ipTM=0.125 tol=5.87
2024-07-12 22:35:58,517 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=48 pTM=0.364 ipTM=0.118 tol=5.95
2024-07-12 22:36:06,995 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=47.5 pTM=0.349 ipTM=0.125 tol=4.33
2024-07-12 22:36:15,480 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=48 pTM=0.362 ipTM=0.122 tol=5.06
2024-07-12 22:36:23,969 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=46.7 pTM=0.334 ipTM=0.122 tol=3.05
2024-07-12 22:36:32,441 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=46.5 pTM=0.339 ipTM=0.125 tol=3.88
2024-07-12 22:36:40,920 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=46.9 pTM=0.351 ipTM=0.121 tol=3.55
2024-07-12 22:36:49,400 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=48.4 pTM=0.37 ipTM=0.117 tol=4.19
2024-07-12 22:36:57,875 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=46.9 pTM=0.342 ipTM=0.125 tol=3.29
2024-07-12 22:37:06,349 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=47.3 pTM=0.359 ipTM=0.122 tol=3.46
2024-07-12 22:37:14,827 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=46.4 pTM=0.338 ipTM=0.124 tol=2.25
2024-07-12 22:37:23,306 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=46.8 pTM=0.338 ipTM=0.125 tol=4.36
2024-07-12 22:37:31,784 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=46.7 pTM=0.34 ipTM=0.127 tol=2.31
2024-07-12 22:37:40,263 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=47.9 pTM=0.359 ipTM=0.121 tol=4.52
2024-07-12 22:37:48,744 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=47.6 pTM=0.362 ipTM=0.122 tol=4.89
2024-07-12 22:37:48,745 alphafold2_multimer_v3_model_5_seed_000 took 263.0s (30 recycles)
2024-07-12 22:37:49,028 reranking models by 'multimer' metric
2024-07-12 22:38:10,659 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-12 22:39:14,119 Relaxation took 85.1s
2024-07-12 22:39:14,119 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=51.7 pTM=0.396 ipTM=0.157
2024-07-12 22:40:27,365 Relaxation took 73.2s
2024-07-12 22:40:27,365 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=48 pTM=0.374 ipTM=0.157
2024-07-12 22:41:26,039 Relaxation took 58.7s
2024-07-12 22:41:26,039 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=50 pTM=0.361 ipTM=0.139
2024-07-12 22:42:30,587 Relaxation took 64.5s
2024-07-12 22:42:30,587 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=47.6 pTM=0.362 ipTM=0.122
2024-07-12 22:43:37,691 Relaxation took 67.1s
2024-07-12 22:43:37,692 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=48.2 pTM=0.359 ipTM=0.114
2024-07-12 22:43:42,504 Done