2024-07-13 00:25:46,214 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 00:25:46,542 Running on GPU
2024-07-13 00:25:55,451 Found 6 citations for tools or databases
2024-07-13 00:25:55,451 Query 1/1: SCAM3_SYCY2 (length 885)
2024-07-13 00:25:57,378 Sleeping for 8s. Reason: PENDING
2024-07-13 00:26:05,802 Sleeping for 7s. Reason: RUNNING
2024-07-13 00:26:13,219 Sleeping for 6s. Reason: RUNNING
2024-07-13 00:26:19,637 Sleeping for 9s. Reason: RUNNING
2024-07-13 00:26:29,059 Sleeping for 8s. Reason: RUNNING
2024-07-13 00:26:37,477 Sleeping for 6s. Reason: RUNNING
2024-07-13 00:26:43,908 Sleeping for 8s. Reason: RUNNING
2024-07-13 00:26:52,338 Sleeping for 6s. Reason: RUNNING
2024-07-13 00:26:58,777 Sleeping for 10s. Reason: RUNNING
2024-07-13 00:27:10,684 Sleeping for 7s. Reason: PENDING
2024-07-13 00:27:18,153 Sleeping for 9s. Reason: RUNNING
2024-07-13 00:27:27,579 Sleeping for 7s. Reason: RUNNING
2024-07-13 00:27:34,993 Sleeping for 7s. Reason: RUNNING
2024-07-13 00:27:42,417 Sleeping for 6s. Reason: RUNNING
2024-07-13 00:27:50,615 Setting max_seq=508, max_extra_seq=2048
2024-07-13 00:31:31,531 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=49 pTM=0.311 ipTM=0.185
2024-07-13 00:31:49,113 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=49.5 pTM=0.326 ipTM=0.208 tol=11.3
2024-07-13 00:32:06,758 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=54.6 pTM=0.355 ipTM=0.229 tol=10.7
2024-07-13 00:32:24,433 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=56 pTM=0.36 ipTM=0.247 tol=4.45
2024-07-13 00:32:47,091 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=57 pTM=0.364 ipTM=0.254 tol=3.67
2024-07-13 00:33:04,814 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=59.7 pTM=0.422 ipTM=0.263 tol=9.66
2024-07-13 00:33:22,541 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=59.7 pTM=0.436 ipTM=0.283 tol=3.75
2024-07-13 00:33:40,280 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.6 pTM=0.423 ipTM=0.302 tol=2.04
2024-07-13 00:33:58,015 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=58.8 pTM=0.416 ipTM=0.298 tol=3.03
2024-07-13 00:34:15,765 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=59.8 pTM=0.422 ipTM=0.323 tol=6.7
2024-07-13 00:34:33,507 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=59.2 pTM=0.417 ipTM=0.329 tol=5.45
2024-07-13 00:34:51,256 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=59.8 pTM=0.421 ipTM=0.336 tol=4.44
2024-07-13 00:35:09,023 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=56.7 pTM=0.422 ipTM=0.333 tol=13.9
2024-07-13 00:35:26,771 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=59.9 pTM=0.43 ipTM=0.319 tol=11.4
2024-07-13 00:35:44,524 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=59.8 pTM=0.426 ipTM=0.329 tol=3.28
2024-07-13 00:36:02,275 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=59.8 pTM=0.423 ipTM=0.339 tol=2.91
2024-07-13 00:36:20,033 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=59.5 pTM=0.424 ipTM=0.326 tol=3.55
2024-07-13 00:36:37,785 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=59.8 pTM=0.424 ipTM=0.336 tol=3.83
2024-07-13 00:36:55,519 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=59.5 pTM=0.427 ipTM=0.322 tol=4.41
2024-07-13 00:37:13,271 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=59.8 pTM=0.425 ipTM=0.327 tol=3.4
2024-07-13 00:37:31,016 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=59.8 pTM=0.426 ipTM=0.323 tol=5.61
2024-07-13 00:37:48,749 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=60 pTM=0.425 ipTM=0.329 tol=3.55
2024-07-13 00:38:06,495 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60 pTM=0.427 ipTM=0.319 tol=4.35
2024-07-13 00:38:24,237 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60.8 pTM=0.427 ipTM=0.323 tol=4.66
2024-07-13 00:38:41,981 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=61.1 pTM=0.43 ipTM=0.327 tol=2.57
2024-07-13 00:38:59,733 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.1 pTM=0.427 ipTM=0.3 tol=2.58
2024-07-13 00:39:17,483 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.9 pTM=0.431 ipTM=0.295 tol=1.87
2024-07-13 00:39:35,238 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=60.6 pTM=0.429 ipTM=0.302 tol=2.97
2024-07-13 00:39:52,992 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=60.7 pTM=0.433 ipTM=0.288 tol=4.95
2024-07-13 00:40:10,744 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.3 pTM=0.427 ipTM=0.287 tol=2.85
2024-07-13 00:40:28,487 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=60.7 pTM=0.433 ipTM=0.288 tol=3.3
2024-07-13 00:40:28,488 alphafold2_multimer_v3_model_1_seed_000 took 715.4s (30 recycles)
2024-07-13 00:40:50,186 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=48.1 pTM=0.311 ipTM=0.228
2024-07-13 00:41:07,976 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=49.7 pTM=0.338 ipTM=0.281 tol=11.8
2024-07-13 00:41:25,755 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=50.5 pTM=0.342 ipTM=0.303 tol=6.52
2024-07-13 00:41:43,591 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=50.3 pTM=0.331 ipTM=0.275 tol=14.7
2024-07-13 00:42:01,396 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=51.4 pTM=0.319 ipTM=0.257 tol=7.49
2024-07-13 00:42:19,194 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=57 pTM=0.366 ipTM=0.261 tol=6.75
2024-07-13 00:42:36,981 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=59.9 pTM=0.427 ipTM=0.272 tol=10.7
2024-07-13 00:42:54,747 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=59.6 pTM=0.407 ipTM=0.297 tol=2.52
2024-07-13 00:43:12,505 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=58.2 pTM=0.389 ipTM=0.305 tol=2.05
2024-07-13 00:43:30,271 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=58.1 pTM=0.382 ipTM=0.317 tol=2.02
2024-07-13 00:43:48,039 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=58.8 pTM=0.394 ipTM=0.333 tol=1.68
2024-07-13 00:44:05,802 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=58.4 pTM=0.387 ipTM=0.339 tol=2.55
2024-07-13 00:44:23,575 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=58 pTM=0.382 ipTM=0.344 tol=1.64
2024-07-13 00:44:41,348 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=58.3 pTM=0.389 ipTM=0.349 tol=1.49
2024-07-13 00:44:59,128 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=58.6 pTM=0.386 ipTM=0.349 tol=1.74
2024-07-13 00:45:16,920 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=58.5 pTM=0.385 ipTM=0.341 tol=1.4
2024-07-13 00:45:34,717 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=58.5 pTM=0.387 ipTM=0.357 tol=1.67
2024-07-13 00:45:52,510 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=59.6 pTM=0.386 ipTM=0.369 tol=1.8
2024-07-13 00:46:10,297 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=58.7 pTM=0.387 ipTM=0.361 tol=1.67
2024-07-13 00:46:28,090 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=58.9 pTM=0.388 ipTM=0.35 tol=1.31
2024-07-13 00:46:45,874 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=58.9 pTM=0.387 ipTM=0.348 tol=1.07
2024-07-13 00:47:03,661 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=58.7 pTM=0.385 ipTM=0.356 tol=1.1
2024-07-13 00:47:21,454 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=58.3 pTM=0.385 ipTM=0.357 tol=1.7
2024-07-13 00:47:39,247 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=59.3 pTM=0.385 ipTM=0.365 tol=1.52
2024-07-13 00:47:57,031 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=58.5 pTM=0.385 ipTM=0.355 tol=1.27
2024-07-13 00:48:14,823 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=59.2 pTM=0.387 ipTM=0.353 tol=1.3
2024-07-13 00:48:32,605 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=58.6 pTM=0.385 ipTM=0.346 tol=2.12
2024-07-13 00:48:50,387 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=58.7 pTM=0.385 ipTM=0.349 tol=1.41
2024-07-13 00:49:08,169 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=58.5 pTM=0.389 ipTM=0.34 tol=1.8
2024-07-13 00:49:25,957 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=58.7 pTM=0.384 ipTM=0.338 tol=1.53
2024-07-13 00:49:43,741 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=58.3 pTM=0.382 ipTM=0.338 tol=2.09
2024-07-13 00:49:43,742 alphafold2_multimer_v3_model_2_seed_000 took 551.3s (30 recycles)
2024-07-13 00:50:02,111 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=46.3 pTM=0.302 ipTM=0.177
2024-07-13 00:50:19,948 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=45.3 pTM=0.313 ipTM=0.163 tol=20
2024-07-13 00:50:37,739 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=50.9 pTM=0.367 ipTM=0.162 tol=14.4
2024-07-13 00:50:55,511 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=53.9 pTM=0.388 ipTM=0.174 tol=8.02
2024-07-13 00:51:13,276 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=53.9 pTM=0.387 ipTM=0.174 tol=3.77
2024-07-13 00:51:31,028 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=54.5 pTM=0.395 ipTM=0.189 tol=3.03
2024-07-13 00:51:48,783 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=55.1 pTM=0.396 ipTM=0.184 tol=3.03
2024-07-13 00:52:06,537 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=54.4 pTM=0.39 ipTM=0.193 tol=4.41
2024-07-13 00:52:24,306 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=54.5 pTM=0.392 ipTM=0.19 tol=5.88
2024-07-13 00:52:42,076 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=54.1 pTM=0.393 ipTM=0.197 tol=4.54
2024-07-13 00:52:59,834 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=56.1 pTM=0.427 ipTM=0.195 tol=9.3
2024-07-13 00:53:17,586 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=55.1 pTM=0.423 ipTM=0.195 tol=2.51
2024-07-13 00:53:35,348 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=55 pTM=0.427 ipTM=0.202 tol=3.25
2024-07-13 00:53:53,096 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=54.9 pTM=0.423 ipTM=0.206 tol=2.09
2024-07-13 00:54:10,851 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=55 pTM=0.425 ipTM=0.2 tol=1.66
2024-07-13 00:54:28,605 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=55.1 pTM=0.422 ipTM=0.198 tol=2.14
2024-07-13 00:54:46,362 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=54.9 pTM=0.421 ipTM=0.193 tol=1.95
2024-07-13 00:55:04,107 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=54.9 pTM=0.427 ipTM=0.201 tol=2.38
2024-07-13 00:55:21,863 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=55.3 pTM=0.428 ipTM=0.19 tol=2.6
2024-07-13 00:55:39,607 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=55.5 pTM=0.43 ipTM=0.191 tol=2.53
2024-07-13 00:55:57,355 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=55.2 pTM=0.429 ipTM=0.196 tol=1.75
2024-07-13 00:56:15,119 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=55.6 pTM=0.426 ipTM=0.189 tol=1.75
2024-07-13 00:56:32,866 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=54.9 pTM=0.427 ipTM=0.193 tol=2.94
2024-07-13 00:56:50,636 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=55.2 pTM=0.425 ipTM=0.195 tol=2.98
2024-07-13 00:57:08,393 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=54.8 pTM=0.426 ipTM=0.196 tol=2.02
2024-07-13 00:57:26,164 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54.5 pTM=0.427 ipTM=0.197 tol=2.01
2024-07-13 00:57:43,925 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=54.2 pTM=0.424 ipTM=0.197 tol=3.57
2024-07-13 00:58:01,686 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=54.3 pTM=0.423 ipTM=0.192 tol=3.6
2024-07-13 00:58:19,447 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=53.7 pTM=0.422 ipTM=0.199 tol=1.53
2024-07-13 00:58:37,217 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=53.7 pTM=0.418 ipTM=0.192 tol=2.29
2024-07-13 00:58:54,971 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=53.8 pTM=0.423 ipTM=0.2 tol=2.42
2024-07-13 00:58:54,972 alphafold2_multimer_v3_model_3_seed_000 took 550.7s (30 recycles)
2024-07-13 00:59:14,142 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=46.5 pTM=0.314 ipTM=0.18
2024-07-13 00:59:32,067 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=48.2 pTM=0.299 ipTM=0.156 tol=8.28
2024-07-13 00:59:49,917 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=53.3 pTM=0.361 ipTM=0.182 tol=7.9
2024-07-13 01:00:07,766 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=56.9 pTM=0.416 ipTM=0.169 tol=11.2
2024-07-13 01:00:25,604 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=57.8 pTM=0.439 ipTM=0.176 tol=5.07
2024-07-13 01:00:43,433 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=57.6 pTM=0.43 ipTM=0.173 tol=8.16
2024-07-13 01:01:01,249 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=57.5 pTM=0.423 ipTM=0.196 tol=3.67
2024-07-13 01:01:19,071 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=57.6 pTM=0.424 ipTM=0.182 tol=2.55
2024-07-13 01:01:36,893 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=57.6 pTM=0.425 ipTM=0.183 tol=3.09
2024-07-13 01:01:54,711 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=57.8 pTM=0.423 ipTM=0.193 tol=3.31
2024-07-13 01:02:12,516 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=58.7 pTM=0.432 ipTM=0.189 tol=1.96
2024-07-13 01:02:30,316 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=57.8 pTM=0.425 ipTM=0.185 tol=2.25
2024-07-13 01:02:48,120 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=57.5 pTM=0.424 ipTM=0.191 tol=1.72
2024-07-13 01:03:05,914 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=57.8 pTM=0.424 ipTM=0.186 tol=3.48
2024-07-13 01:03:23,712 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=57.4 pTM=0.419 ipTM=0.188 tol=2.48
2024-07-13 01:03:41,501 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=58 pTM=0.425 ipTM=0.18 tol=3.04
2024-07-13 01:03:59,301 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=58.2 pTM=0.425 ipTM=0.183 tol=2.92
2024-07-13 01:04:17,105 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=57.5 pTM=0.417 ipTM=0.189 tol=2.35
2024-07-13 01:04:34,908 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=57.5 pTM=0.424 ipTM=0.183 tol=2.11
2024-07-13 01:04:52,707 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=57.4 pTM=0.421 ipTM=0.181 tol=3.37
2024-07-13 01:05:10,521 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=57.6 pTM=0.419 ipTM=0.18 tol=3.55
2024-07-13 01:05:28,319 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=59 pTM=0.424 ipTM=0.191 tol=2.6
2024-07-13 01:05:46,124 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=58.2 pTM=0.423 ipTM=0.181 tol=2.03
2024-07-13 01:06:03,928 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=59.6 pTM=0.428 ipTM=0.19 tol=1.96
2024-07-13 01:06:21,733 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=59.4 pTM=0.428 ipTM=0.184 tol=2.23
2024-07-13 01:06:39,527 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=59.1 pTM=0.425 ipTM=0.192 tol=2.36
2024-07-13 01:06:57,318 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=58.6 pTM=0.423 ipTM=0.182 tol=2.47
2024-07-13 01:07:15,125 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=58.4 pTM=0.423 ipTM=0.184 tol=3.92
2024-07-13 01:07:32,940 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=57.7 pTM=0.416 ipTM=0.179 tol=6.74
2024-07-13 01:07:50,754 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=58.5 pTM=0.418 ipTM=0.186 tol=3.56
2024-07-13 01:08:08,558 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=58.4 pTM=0.421 ipTM=0.181 tol=4
2024-07-13 01:08:08,559 alphafold2_multimer_v3_model_4_seed_000 took 552.3s (30 recycles)
2024-07-13 01:08:26,871 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=44.5 pTM=0.304 ipTM=0.165
2024-07-13 01:08:44,663 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=47 pTM=0.315 ipTM=0.169 tol=16.8
2024-07-13 01:09:02,443 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=45.7 pTM=0.306 ipTM=0.167 tol=5.9
2024-07-13 01:09:20,232 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=45 pTM=0.308 ipTM=0.161 tol=4.21
2024-07-13 01:09:38,029 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=45.4 pTM=0.306 ipTM=0.16 tol=4.26
2024-07-13 01:09:55,832 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=46.5 pTM=0.314 ipTM=0.165 tol=2.79
2024-07-13 01:10:13,641 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=46.4 pTM=0.306 ipTM=0.158 tol=5.72
2024-07-13 01:10:31,436 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=48.5 pTM=0.35 ipTM=0.165 tol=7.9
2024-07-13 01:10:49,226 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=46.9 pTM=0.333 ipTM=0.166 tol=3.95
2024-07-13 01:11:07,015 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=47.5 pTM=0.338 ipTM=0.166 tol=5.3
2024-07-13 01:11:24,801 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=47.6 pTM=0.347 ipTM=0.167 tol=3.65
2024-07-13 01:11:42,585 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=46.8 pTM=0.337 ipTM=0.18 tol=3.73
2024-07-13 01:12:00,381 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=46.2 pTM=0.328 ipTM=0.173 tol=4.84
2024-07-13 01:12:18,161 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=47.6 pTM=0.348 ipTM=0.177 tol=4.51
2024-07-13 01:12:35,958 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=47.8 pTM=0.346 ipTM=0.172 tol=2.97
2024-07-13 01:12:53,751 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=46.8 pTM=0.34 ipTM=0.173 tol=5.76
2024-07-13 01:13:11,545 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=46.2 pTM=0.328 ipTM=0.177 tol=4.81
2024-07-13 01:13:29,339 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=45.7 pTM=0.323 ipTM=0.183 tol=6.59
2024-07-13 01:13:47,131 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=46.3 pTM=0.321 ipTM=0.192 tol=3.23
2024-07-13 01:14:04,909 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=46.3 pTM=0.324 ipTM=0.219 tol=2.3
2024-07-13 01:14:22,681 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=45.9 pTM=0.328 ipTM=0.22 tol=3.35
2024-07-13 01:14:40,461 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=47 pTM=0.341 ipTM=0.261 tol=6.96
2024-07-13 01:14:58,215 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=47.2 pTM=0.338 ipTM=0.224 tol=5.07
2024-07-13 01:15:15,984 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=46.2 pTM=0.34 ipTM=0.265 tol=4.07
2024-07-13 01:15:33,763 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=46 pTM=0.333 ipTM=0.233 tol=3.25
2024-07-13 01:15:51,550 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=44.8 pTM=0.331 ipTM=0.248 tol=2.68
2024-07-13 01:16:09,339 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=44.6 pTM=0.323 ipTM=0.227 tol=4.3
2024-07-13 01:16:27,117 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=45.6 pTM=0.328 ipTM=0.243 tol=4.08
2024-07-13 01:16:44,902 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=44.5 pTM=0.318 ipTM=0.218 tol=4.41
2024-07-13 01:17:02,673 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=44.7 pTM=0.329 ipTM=0.255 tol=2.82
2024-07-13 01:17:20,446 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=44.4 pTM=0.333 ipTM=0.237 tol=3.19
2024-07-13 01:17:20,447 alphafold2_multimer_v3_model_5_seed_000 took 551.4s (30 recycles)
2024-07-13 01:17:20,940 reranking models by 'multimer' metric
2024-07-13 01:17:37,730 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-13 01:18:26,150 Relaxation took 65.2s
2024-07-13 01:18:26,150 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=58.3 pTM=0.382 ipTM=0.338
2024-07-13 01:19:34,972 Relaxation took 68.8s
2024-07-13 01:19:34,972 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=60.7 pTM=0.433 ipTM=0.288
2024-07-13 01:20:39,405 Relaxation took 64.4s
2024-07-13 01:20:39,406 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=44.4 pTM=0.333 ipTM=0.237
2024-07-13 01:21:26,704 Relaxation took 47.3s
2024-07-13 01:21:26,705 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=53.8 pTM=0.423 ipTM=0.2
2024-07-13 01:22:15,007 Relaxation took 48.3s
2024-07-13 01:22:15,007 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=58.4 pTM=0.421 ipTM=0.181
2024-07-13 01:22:16,557 Done