2024-07-13 00:28:55,108 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-13 00:28:55,412 Running on GPU 2024-07-13 00:29:01,641 Found 6 citations for tools or databases 2024-07-13 00:29:01,641 Query 1/1: SELB_PRB2 (length 1012) 2024-07-13 00:29:02,078 Sleeping for 7s. Reason: PENDING 2024-07-13 00:29:09,491 Sleeping for 5s. Reason: RUNNING 2024-07-13 00:29:14,954 Sleeping for 7s. Reason: RUNNING 2024-07-13 00:29:22,406 Sleeping for 9s. Reason: RUNNING 2024-07-13 00:29:31,858 Sleeping for 10s. Reason: RUNNING 2024-07-13 00:29:42,283 Sleeping for 8s. Reason: RUNNING 2024-07-13 00:29:50,741 Sleeping for 8s. Reason: RUNNING 2024-07-13 00:29:59,158 Sleeping for 5s. Reason: RUNNING 2024-07-13 00:30:04,579 Sleeping for 5s. Reason: RUNNING 2024-07-13 00:30:10,026 Sleeping for 6s. Reason: RUNNING 2024-07-13 00:30:16,471 Sleeping for 6s. Reason: RUNNING 2024-07-13 00:30:22,890 Sleeping for 8s. Reason: RUNNING 2024-07-13 00:30:31,344 Sleeping for 10s. Reason: RUNNING 2024-07-13 00:30:41,771 Sleeping for 8s. Reason: RUNNING 2024-07-13 00:30:50,188 Sleeping for 10s. Reason: RUNNING 2024-07-13 00:31:00,617 Sleeping for 5s. Reason: RUNNING 2024-07-13 00:31:06,052 Sleeping for 6s. Reason: RUNNING 2024-07-13 00:31:12,475 Sleeping for 8s. Reason: RUNNING 2024-07-13 00:31:20,890 Sleeping for 5s. Reason: RUNNING 2024-07-13 00:31:27,929 Sleeping for 6s. Reason: PENDING 2024-07-13 00:31:34,372 Sleeping for 10s. Reason: RUNNING 2024-07-13 00:31:44,800 Sleeping for 5s. Reason: RUNNING 2024-07-13 00:31:50,229 Sleeping for 7s. Reason: RUNNING 2024-07-13 00:31:57,657 Sleeping for 9s. Reason: RUNNING 2024-07-13 00:32:07,082 Sleeping for 7s. Reason: RUNNING 2024-07-13 00:32:14,501 Sleeping for 8s. Reason: RUNNING 2024-07-13 00:32:26,934 Sleeping for 6s. Reason: RUNNING 2024-07-13 00:32:33,343 Sleeping for 5s. Reason: RUNNING 2024-07-13 00:32:38,785 Sleeping for 10s. Reason: RUNNING 2024-07-13 00:32:49,212 Sleeping for 8s. Reason: RUNNING 2024-07-13 00:32:57,653 Sleeping for 7s. Reason: RUNNING 2024-07-13 00:33:05,074 Sleeping for 5s. Reason: RUNNING 2024-07-13 00:33:14,631 Setting max_seq=508, max_extra_seq=1767 2024-07-13 00:35:46,505 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=52.8 pTM=0.521 ipTM=0.172 2024-07-13 00:36:08,275 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=54.5 pTM=0.537 ipTM=0.18 tol=21.1 2024-07-13 00:36:30,140 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=54.4 pTM=0.531 ipTM=0.179 tol=12 2024-07-13 00:36:52,002 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=54.1 pTM=0.526 ipTM=0.179 tol=7.75 2024-07-13 00:37:13,902 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=54.2 pTM=0.529 ipTM=0.193 tol=6.66 2024-07-13 00:37:35,799 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=54.5 pTM=0.53 ipTM=0.2 tol=4.66 2024-07-13 00:37:57,696 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=54.6 pTM=0.531 ipTM=0.197 tol=5.46 2024-07-13 00:38:19,577 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=54.5 pTM=0.526 ipTM=0.194 tol=5.03 2024-07-13 00:38:41,471 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=54.7 pTM=0.528 ipTM=0.189 tol=3.81 2024-07-13 00:39:03,369 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=54.8 pTM=0.528 ipTM=0.193 tol=4.31 2024-07-13 00:39:25,306 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=54.9 pTM=0.534 ipTM=0.201 tol=4.02 2024-07-13 00:39:47,250 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=54.8 pTM=0.532 ipTM=0.192 tol=3.84 2024-07-13 00:40:09,188 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=54.8 pTM=0.531 ipTM=0.18 tol=5.05 2024-07-13 00:40:31,102 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=55.4 pTM=0.531 ipTM=0.18 tol=4.29 2024-07-13 00:40:53,041 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=55.8 pTM=0.534 ipTM=0.187 tol=3.62 2024-07-13 00:41:14,979 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=55.2 pTM=0.53 ipTM=0.204 tol=2.82 2024-07-13 00:41:36,913 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=55.2 pTM=0.531 ipTM=0.203 tol=2.5 2024-07-13 00:41:58,841 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=55.2 pTM=0.527 ipTM=0.19 tol=4.42 2024-07-13 00:42:20,780 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=55.1 pTM=0.526 ipTM=0.181 tol=4.2 2024-07-13 00:42:42,711 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=55.2 pTM=0.528 ipTM=0.187 tol=3.25 2024-07-13 00:43:04,649 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=55.2 pTM=0.53 ipTM=0.203 tol=2.92 2024-07-13 00:43:26,575 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=55.3 pTM=0.527 ipTM=0.198 tol=3.67 2024-07-13 00:43:48,511 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=55.4 pTM=0.526 ipTM=0.187 tol=2.99 2024-07-13 00:44:10,455 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=55.3 pTM=0.53 ipTM=0.185 tol=2.48 2024-07-13 00:44:32,384 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=55.6 pTM=0.531 ipTM=0.186 tol=4.29 2024-07-13 00:44:54,332 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=55.5 pTM=0.536 ipTM=0.197 tol=4.2 2024-07-13 00:45:16,282 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=54.9 pTM=0.532 ipTM=0.203 tol=6.05 2024-07-13 00:45:38,224 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=55 pTM=0.528 ipTM=0.193 tol=5.63 2024-07-13 00:46:00,173 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=55.3 pTM=0.532 ipTM=0.19 tol=5.04 2024-07-13 00:46:22,106 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=55.5 pTM=0.531 ipTM=0.193 tol=3.91 2024-07-13 00:46:44,055 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=55.2 pTM=0.53 ipTM=0.188 tol=3.81 2024-07-13 00:46:44,056 alphafold2_multimer_v3_model_1_seed_000 took 805.8s (30 recycles) 2024-07-13 00:47:06,586 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=52.3 pTM=0.51 ipTM=0.155 2024-07-13 00:47:28,537 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=53.5 pTM=0.527 ipTM=0.183 tol=16.4 2024-07-13 00:47:50,461 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=54 pTM=0.53 ipTM=0.195 tol=7.32 2024-07-13 00:48:12,381 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=54 pTM=0.525 ipTM=0.193 tol=5.95 2024-07-13 00:48:34,286 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=54.8 pTM=0.534 ipTM=0.194 tol=5.26 2024-07-13 00:48:56,212 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=54.7 pTM=0.531 ipTM=0.185 tol=4.14 2024-07-13 00:49:18,143 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=55 pTM=0.533 ipTM=0.192 tol=3.41 2024-07-13 00:49:40,093 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=55 pTM=0.532 ipTM=0.197 tol=3.33 2024-07-13 00:50:02,036 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=55.1 pTM=0.533 ipTM=0.192 tol=3.33 2024-07-13 00:50:23,969 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=55 pTM=0.531 ipTM=0.19 tol=3.77 2024-07-13 00:50:45,896 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=55.3 pTM=0.539 ipTM=0.199 tol=2.53 2024-07-13 00:51:07,837 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=55.4 pTM=0.537 ipTM=0.19 tol=2.08 2024-07-13 00:51:29,763 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=55.2 pTM=0.535 ipTM=0.189 tol=2.4 2024-07-13 00:51:51,690 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=55.4 pTM=0.535 ipTM=0.187 tol=2.29 2024-07-13 00:52:13,608 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=55.3 pTM=0.535 ipTM=0.186 tol=2.03 2024-07-13 00:52:35,544 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=55.4 pTM=0.535 ipTM=0.188 tol=1.67 2024-07-13 00:52:57,471 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=55.5 pTM=0.538 ipTM=0.197 tol=2.06 2024-07-13 00:53:19,362 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=55.2 pTM=0.533 ipTM=0.189 tol=1.97 2024-07-13 00:53:41,258 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=55 pTM=0.531 ipTM=0.188 tol=2.17 2024-07-13 00:54:03,173 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=55.2 pTM=0.534 ipTM=0.185 tol=1.97 2024-07-13 00:54:25,079 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=55.1 pTM=0.533 ipTM=0.187 tol=1.83 2024-07-13 00:54:46,960 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=55.2 pTM=0.534 ipTM=0.186 tol=2.05 2024-07-13 00:55:08,854 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=55.4 pTM=0.536 ipTM=0.188 tol=2.83 2024-07-13 00:55:30,757 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=55.4 pTM=0.536 ipTM=0.196 tol=1.81 2024-07-13 00:55:52,639 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=55.2 pTM=0.534 ipTM=0.195 tol=2.25 2024-07-13 00:56:14,506 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=55.6 pTM=0.537 ipTM=0.186 tol=2.47 2024-07-13 00:56:36,399 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=55.4 pTM=0.537 ipTM=0.198 tol=3.1 2024-07-13 00:56:58,295 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=55.5 pTM=0.536 ipTM=0.195 tol=2.8 2024-07-13 00:57:20,213 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=55.5 pTM=0.539 ipTM=0.201 tol=3.14 2024-07-13 00:57:42,119 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=55.5 pTM=0.538 ipTM=0.195 tol=3.14 2024-07-13 00:58:04,026 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=55.2 pTM=0.536 ipTM=0.19 tol=2.5 2024-07-13 00:58:04,027 alphafold2_multimer_v3_model_2_seed_000 took 679.3s (30 recycles) 2024-07-13 00:58:26,700 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=53.3 pTM=0.514 ipTM=0.148 2024-07-13 00:58:48,699 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=53.9 pTM=0.528 ipTM=0.178 tol=19.6 2024-07-13 00:59:10,687 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=54.4 pTM=0.532 ipTM=0.195 tol=9.8 2024-07-13 00:59:32,683 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=54.3 pTM=0.53 ipTM=0.19 tol=7.55 2024-07-13 00:59:54,691 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=54.4 pTM=0.532 ipTM=0.193 tol=6.08 2024-07-13 01:00:16,734 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=54.3 pTM=0.53 ipTM=0.191 tol=5.78 2024-07-13 01:00:38,775 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=54.7 pTM=0.534 ipTM=0.196 tol=5.57 2024-07-13 01:01:00,816 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=54.6 pTM=0.532 ipTM=0.193 tol=5.6 2024-07-13 01:01:22,834 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=54.6 pTM=0.532 ipTM=0.199 tol=4.89 2024-07-13 01:01:44,858 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=54.5 pTM=0.53 ipTM=0.196 tol=4.05 2024-07-13 01:02:06,898 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=55 pTM=0.537 ipTM=0.204 tol=3.97 2024-07-13 01:02:28,934 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=54.9 pTM=0.535 ipTM=0.2 tol=4.59 2024-07-13 01:02:51,002 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=54.8 pTM=0.533 ipTM=0.2 tol=3.4 2024-07-13 01:03:13,049 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=54.7 pTM=0.533 ipTM=0.201 tol=3.83 2024-07-13 01:03:35,105 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=54.8 pTM=0.533 ipTM=0.2 tol=3.5 2024-07-13 01:03:57,140 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=54.7 pTM=0.535 ipTM=0.201 tol=4.07 2024-07-13 01:04:19,178 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=55 pTM=0.54 ipTM=0.206 tol=4.13 2024-07-13 01:04:41,196 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=54.7 pTM=0.534 ipTM=0.202 tol=4.57 2024-07-13 01:05:03,229 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=54.4 pTM=0.53 ipTM=0.197 tol=4.12 2024-07-13 01:05:25,263 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=54.7 pTM=0.534 ipTM=0.199 tol=3.82 2024-07-13 01:05:47,302 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=55 pTM=0.537 ipTM=0.2 tol=3.94 2024-07-13 01:06:09,325 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=54.7 pTM=0.533 ipTM=0.201 tol=3.96 2024-07-13 01:06:31,347 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=54.6 pTM=0.532 ipTM=0.203 tol=5.3 2024-07-13 01:06:53,372 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=54.6 pTM=0.535 ipTM=0.2 tol=4.08 2024-07-13 01:07:15,401 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=54.4 pTM=0.531 ipTM=0.199 tol=4.11 2024-07-13 01:07:37,398 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54.8 pTM=0.535 ipTM=0.197 tol=4 2024-07-13 01:07:59,388 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=54.5 pTM=0.532 ipTM=0.2 tol=5.51 2024-07-13 01:08:21,388 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=54.6 pTM=0.533 ipTM=0.201 tol=4.68 2024-07-13 01:08:43,403 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=54.6 pTM=0.533 ipTM=0.201 tol=4.95 2024-07-13 01:09:05,418 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=54.7 pTM=0.532 ipTM=0.198 tol=4.81 2024-07-13 01:09:27,424 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=54.9 pTM=0.536 ipTM=0.201 tol=4.12 2024-07-13 01:09:27,425 alphafold2_multimer_v3_model_3_seed_000 took 682.8s (30 recycles) 2024-07-13 01:09:50,206 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=52.4 pTM=0.514 ipTM=0.178 2024-07-13 01:10:12,224 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=52.5 pTM=0.525 ipTM=0.201 tol=18.1 2024-07-13 01:10:34,202 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=52.3 pTM=0.521 ipTM=0.211 tol=12.9 2024-07-13 01:10:56,146 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=52.7 pTM=0.521 ipTM=0.221 tol=8.2 2024-07-13 01:11:18,097 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=54.2 pTM=0.537 ipTM=0.255 tol=7.43 2024-07-13 01:11:40,057 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=53.9 pTM=0.533 ipTM=0.298 tol=4.09 2024-07-13 01:12:02,026 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=53.8 pTM=0.535 ipTM=0.296 tol=4.39 2024-07-13 01:12:23,968 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=53.6 pTM=0.533 ipTM=0.319 tol=4.27 2024-07-13 01:12:45,910 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=53.8 pTM=0.533 ipTM=0.327 tol=3.05 2024-07-13 01:13:07,861 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=53.6 pTM=0.531 ipTM=0.351 tol=2.24 2024-07-13 01:13:29,829 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=54.1 pTM=0.538 ipTM=0.351 tol=2.58 2024-07-13 01:13:51,780 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=54.3 pTM=0.537 ipTM=0.41 tol=2.27 2024-07-13 01:14:13,721 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=54 pTM=0.534 ipTM=0.44 tol=2.19 2024-07-13 01:14:35,684 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=54.2 pTM=0.536 ipTM=0.446 tol=2.66 2024-07-13 01:14:57,625 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=53.8 pTM=0.535 ipTM=0.436 tol=3.37 2024-07-13 01:15:19,570 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=54.1 pTM=0.537 ipTM=0.441 tol=2.83 2024-07-13 01:15:41,515 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=54.1 pTM=0.536 ipTM=0.445 tol=2.52 2024-07-13 01:16:03,479 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=53.7 pTM=0.533 ipTM=0.412 tol=2.3 2024-07-13 01:16:25,422 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=53.8 pTM=0.533 ipTM=0.386 tol=2.56 2024-07-13 01:16:47,366 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=53.9 pTM=0.535 ipTM=0.39 tol=3.07 2024-07-13 01:17:09,317 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=54.1 pTM=0.536 ipTM=0.417 tol=2.2 2024-07-13 01:17:31,284 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=53.9 pTM=0.533 ipTM=0.433 tol=2.66 2024-07-13 01:17:53,244 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=54.1 pTM=0.534 ipTM=0.406 tol=2.01 2024-07-13 01:18:15,189 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=54 pTM=0.535 ipTM=0.406 tol=2.88 2024-07-13 01:18:37,164 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=53.6 pTM=0.53 ipTM=0.395 tol=2.23 2024-07-13 01:18:59,136 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=53.9 pTM=0.535 ipTM=0.419 tol=2.5 2024-07-13 01:19:21,111 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=53.8 pTM=0.533 ipTM=0.423 tol=2.33 2024-07-13 01:19:43,076 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=53.7 pTM=0.531 ipTM=0.398 tol=2.25 2024-07-13 01:20:05,059 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=54.1 pTM=0.535 ipTM=0.417 tol=7.27 2024-07-13 01:20:27,031 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=53.9 pTM=0.534 ipTM=0.406 tol=7.16 2024-07-13 01:20:48,979 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=53.9 pTM=0.534 ipTM=0.403 tol=2.03 2024-07-13 01:20:48,979 alphafold2_multimer_v3_model_4_seed_000 took 680.9s (30 recycles) 2024-07-13 01:21:11,626 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=52.3 pTM=0.515 ipTM=0.129 2024-07-13 01:21:33,654 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=52.9 pTM=0.526 ipTM=0.135 tol=17.1 2024-07-13 01:21:55,673 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=52.8 pTM=0.518 ipTM=0.121 tol=9.65 2024-07-13 01:22:17,684 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=53.1 pTM=0.521 ipTM=0.131 tol=7.64 2024-07-13 01:22:39,739 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=53.4 pTM=0.524 ipTM=0.125 tol=2.97 2024-07-13 01:23:01,791 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=52.9 pTM=0.52 ipTM=0.122 tol=2.71 2024-07-13 01:23:23,883 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=53.2 pTM=0.522 ipTM=0.122 tol=2.88 2024-07-13 01:23:45,955 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=53.5 pTM=0.525 ipTM=0.124 tol=2.46 2024-07-13 01:24:08,015 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=53.7 pTM=0.524 ipTM=0.124 tol=2.33 2024-07-13 01:24:30,077 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=53.2 pTM=0.52 ipTM=0.122 tol=2.73 2024-07-13 01:24:52,119 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=54.2 pTM=0.53 ipTM=0.125 tol=6.3 2024-07-13 01:25:14,166 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=54.1 pTM=0.528 ipTM=0.129 tol=6.52 2024-07-13 01:25:36,223 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=53.9 pTM=0.525 ipTM=0.13 tol=3 2024-07-13 01:25:58,271 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=53.8 pTM=0.525 ipTM=0.131 tol=7.42 2024-07-13 01:26:20,349 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=53.8 pTM=0.525 ipTM=0.137 tol=7.22 2024-07-13 01:26:42,410 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=53.8 pTM=0.528 ipTM=0.145 tol=6.8 2024-07-13 01:27:04,482 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=54.5 pTM=0.534 ipTM=0.144 tol=6.36 2024-07-13 01:27:26,550 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=54.1 pTM=0.53 ipTM=0.148 tol=2.39 2024-07-13 01:27:48,621 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=53.6 pTM=0.525 ipTM=0.161 tol=7.21 2024-07-13 01:28:10,675 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=53.9 pTM=0.529 ipTM=0.172 tol=6.86 2024-07-13 01:28:32,735 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=54 pTM=0.53 ipTM=0.181 tol=3.38 2024-07-13 01:28:54,799 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=54.1 pTM=0.532 ipTM=0.185 tol=2.76 2024-07-13 01:29:16,870 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=54.2 pTM=0.531 ipTM=0.184 tol=2.5 2024-07-13 01:29:38,925 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=53.7 pTM=0.529 ipTM=0.184 tol=7.77 2024-07-13 01:30:00,992 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=53.8 pTM=0.527 ipTM=0.183 tol=7.42 2024-07-13 01:30:23,014 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=54.1 pTM=0.534 ipTM=0.188 tol=2.93 2024-07-13 01:30:45,041 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=53.9 pTM=0.532 ipTM=0.186 tol=2.38 2024-07-13 01:31:07,054 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=53.8 pTM=0.531 ipTM=0.19 tol=2.51 2024-07-13 01:31:29,066 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=53.7 pTM=0.528 ipTM=0.183 tol=9.2 2024-07-13 01:31:51,077 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=53.9 pTM=0.532 ipTM=0.186 tol=5.55 2024-07-13 01:32:13,096 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=53.8 pTM=0.53 ipTM=0.181 tol=8.02 2024-07-13 01:32:13,097 alphafold2_multimer_v3_model_5_seed_000 took 683.5s (30 recycles) 2024-07-13 01:32:13,722 reranking models by 'multimer' metric 2024-07-13 01:32:14,893 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-13 01:33:28,582 Relaxation took 74.9s 2024-07-13 01:33:28,583 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=53.9 pTM=0.534 ipTM=0.403 2024-07-13 01:34:36,802 Relaxation took 68.2s 2024-07-13 01:34:36,803 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=54.9 pTM=0.536 ipTM=0.201 2024-07-13 01:35:38,813 Relaxation took 62.0s 2024-07-13 01:35:38,813 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=55.2 pTM=0.536 ipTM=0.19 2024-07-13 01:36:38,638 Relaxation took 59.8s 2024-07-13 01:36:38,638 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=55.2 pTM=0.53 ipTM=0.188 2024-07-13 01:37:39,688 Relaxation took 61.0s 2024-07-13 01:37:39,688 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=53.8 pTM=0.53 ipTM=0.181 2024-07-13 01:37:41,459 Done