2024-07-13 01:39:26,629 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 01:39:26,954 Running on GPU
2024-07-13 01:39:42,814 Found 6 citations for tools or databases
2024-07-13 01:39:42,814 Query 1/1: SERB1_ZN490 (length 937)
2024-07-13 01:39:43,280 Sleeping for 9s. Reason: PENDING
2024-07-13 01:39:52,715 Sleeping for 8s. Reason: RUNNING
2024-07-13 01:40:01,153 Sleeping for 6s. Reason: RUNNING
2024-07-13 01:40:07,580 Sleeping for 6s. Reason: RUNNING
2024-07-13 01:40:13,991 Sleeping for 10s. Reason: RUNNING
2024-07-13 01:40:24,439 Sleeping for 5s. Reason: RUNNING
2024-07-13 01:40:29,876 Sleeping for 7s. Reason: RUNNING
2024-07-13 01:40:37,284 Sleeping for 7s. Reason: RUNNING
2024-07-13 01:40:44,710 Sleeping for 9s. Reason: RUNNING
2024-07-13 01:40:54,157 Sleeping for 10s. Reason: RUNNING
2024-07-13 01:41:04,594 Sleeping for 5s. Reason: RUNNING
2024-07-13 01:41:10,026 Sleeping for 5s. Reason: RUNNING
2024-07-13 01:41:15,498 Sleeping for 7s. Reason: RUNNING
2024-07-13 01:41:22,925 Sleeping for 7s. Reason: RUNNING
2024-07-13 01:41:30,350 Sleeping for 8s. Reason: RUNNING
2024-07-13 01:41:38,770 Sleeping for 7s. Reason: RUNNING
2024-07-13 01:41:46,193 Sleeping for 10s. Reason: RUNNING
2024-07-13 01:41:56,623 Sleeping for 5s. Reason: RUNNING
2024-07-13 01:42:02,049 Sleeping for 9s. Reason: RUNNING
2024-07-13 01:42:11,466 Sleeping for 8s. Reason: RUNNING
2024-07-13 01:42:19,903 Sleeping for 9s. Reason: RUNNING
2024-07-13 01:42:29,314 Sleeping for 8s. Reason: RUNNING
2024-07-13 01:42:37,762 Sleeping for 9s. Reason: RUNNING
2024-07-13 01:42:50,975 Sleeping for 8s. Reason: PENDING
2024-07-13 01:42:59,403 Sleeping for 7s. Reason: RUNNING
2024-07-13 01:43:06,826 Sleeping for 8s. Reason: RUNNING
2024-07-13 01:43:15,299 Sleeping for 6s. Reason: RUNNING
2024-07-13 01:43:21,731 Sleeping for 9s. Reason: RUNNING
2024-07-13 01:43:31,156 Sleeping for 6s. Reason: RUNNING
2024-07-13 01:43:37,580 Sleeping for 8s. Reason: RUNNING
2024-07-13 01:43:45,998 Sleeping for 6s. Reason: RUNNING
2024-07-13 01:43:52,422 Sleeping for 5s. Reason: RUNNING
2024-07-13 01:43:57,846 Sleeping for 8s. Reason: RUNNING
2024-07-13 01:44:09,747 Setting max_seq=508, max_extra_seq=2048
2024-07-13 01:47:14,810 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=37.3 pTM=0.21 ipTM=0.133
2024-07-13 01:47:34,761 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=37.6 pTM=0.209 ipTM=0.145 tol=19.3
2024-07-13 01:47:54,777 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=37.3 pTM=0.205 ipTM=0.145 tol=7.41
2024-07-13 01:48:14,843 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=38 pTM=0.208 ipTM=0.144 tol=5.53
2024-07-13 01:48:34,944 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=38.4 pTM=0.208 ipTM=0.143 tol=6.2
2024-07-13 01:48:55,062 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=37.3 pTM=0.208 ipTM=0.143 tol=5.98
2024-07-13 01:49:15,208 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=38 pTM=0.206 ipTM=0.143 tol=3.78
2024-07-13 01:49:35,365 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=37.6 pTM=0.207 ipTM=0.145 tol=3.38
2024-07-13 01:49:55,536 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=37.6 pTM=0.206 ipTM=0.142 tol=5.96
2024-07-13 01:50:15,716 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=37.5 pTM=0.207 ipTM=0.142 tol=5.25
2024-07-13 01:50:35,903 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=37.6 pTM=0.207 ipTM=0.142 tol=4.69
2024-07-13 01:50:56,089 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=37.3 pTM=0.204 ipTM=0.14 tol=5.33
2024-07-13 01:51:16,288 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=37.6 pTM=0.205 ipTM=0.141 tol=5.86
2024-07-13 01:51:36,485 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=37.2 pTM=0.204 ipTM=0.143 tol=2.71
2024-07-13 01:51:56,695 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=37.4 pTM=0.203 ipTM=0.142 tol=6.14
2024-07-13 01:52:16,901 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=37.7 pTM=0.206 ipTM=0.143 tol=3.75
2024-07-13 01:52:37,096 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=37.5 pTM=0.206 ipTM=0.142 tol=3.5
2024-07-13 01:52:57,296 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=37.8 pTM=0.206 ipTM=0.141 tol=3.86
2024-07-13 01:53:17,493 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=37.2 pTM=0.204 ipTM=0.143 tol=6.35
2024-07-13 01:53:37,686 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=37.5 pTM=0.206 ipTM=0.143 tol=3.81
2024-07-13 01:53:57,877 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=37.1 pTM=0.205 ipTM=0.141 tol=6.83
2024-07-13 01:54:18,074 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=37.7 pTM=0.205 ipTM=0.141 tol=4.88
2024-07-13 01:54:38,271 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=37.6 pTM=0.208 ipTM=0.142 tol=4.02
2024-07-13 01:54:58,478 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=37.4 pTM=0.205 ipTM=0.142 tol=3.06
2024-07-13 01:55:18,686 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=37.3 pTM=0.204 ipTM=0.14 tol=2.83
2024-07-13 01:55:38,890 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=37.7 pTM=0.205 ipTM=0.14 tol=2.18
2024-07-13 01:55:59,093 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=37.3 pTM=0.205 ipTM=0.14 tol=2.08
2024-07-13 01:56:19,295 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=37.6 pTM=0.205 ipTM=0.14 tol=4.39
2024-07-13 01:56:39,485 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=37.6 pTM=0.203 ipTM=0.14 tol=4.43
2024-07-13 01:56:59,681 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=37.3 pTM=0.202 ipTM=0.141 tol=2.52
2024-07-13 01:57:19,874 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=37.3 pTM=0.202 ipTM=0.139 tol=3.99
2024-07-13 01:57:19,874 alphafold2_multimer_v3_model_1_seed_000 took 786.4s (30 recycles)
2024-07-13 01:57:40,526 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=38.9 pTM=0.239 ipTM=0.14
2024-07-13 01:58:00,677 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=39.4 pTM=0.239 ipTM=0.148 tol=11.7
2024-07-13 01:58:20,849 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=39.7 pTM=0.238 ipTM=0.144 tol=6.18
2024-07-13 01:58:41,032 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=39.9 pTM=0.238 ipTM=0.141 tol=3.46
2024-07-13 01:59:01,225 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=40.8 pTM=0.239 ipTM=0.141 tol=2.83
2024-07-13 01:59:21,416 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=40 pTM=0.239 ipTM=0.143 tol=3.18
2024-07-13 01:59:41,600 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=41 pTM=0.242 ipTM=0.143 tol=2.2
2024-07-13 02:00:01,782 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=40.7 pTM=0.243 ipTM=0.143 tol=3.26
2024-07-13 02:00:21,974 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=41 pTM=0.242 ipTM=0.141 tol=1.96
2024-07-13 02:00:42,155 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=40.5 pTM=0.243 ipTM=0.142 tol=2.37
2024-07-13 02:01:02,330 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=40.8 pTM=0.244 ipTM=0.142 tol=3.1
2024-07-13 02:01:22,498 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=40.7 pTM=0.243 ipTM=0.142 tol=1.95
2024-07-13 02:01:42,678 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=40.8 pTM=0.243 ipTM=0.143 tol=2.31
2024-07-13 02:02:02,864 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=40.5 pTM=0.243 ipTM=0.144 tol=2.27
2024-07-13 02:02:23,042 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=40.4 pTM=0.244 ipTM=0.146 tol=3.06
2024-07-13 02:02:43,200 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=40.5 pTM=0.246 ipTM=0.158 tol=3.54
2024-07-13 02:03:03,354 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=40.3 pTM=0.248 ipTM=0.165 tol=3.95
2024-07-13 02:03:23,510 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=40.9 pTM=0.252 ipTM=0.179 tol=4.36
2024-07-13 02:03:43,666 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=40.7 pTM=0.252 ipTM=0.179 tol=4.86
2024-07-13 02:04:03,829 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=40.7 pTM=0.249 ipTM=0.18 tol=3.46
2024-07-13 02:04:23,976 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=40 pTM=0.249 ipTM=0.178 tol=3.08
2024-07-13 02:04:44,146 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=40.5 pTM=0.25 ipTM=0.173 tol=2.7
2024-07-13 02:05:04,313 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=40.4 pTM=0.252 ipTM=0.174 tol=2.58
2024-07-13 02:05:24,478 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=40.5 pTM=0.253 ipTM=0.18 tol=7.61
2024-07-13 02:05:44,636 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=40 pTM=0.251 ipTM=0.185 tol=8.78
2024-07-13 02:06:04,804 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=40.2 pTM=0.251 ipTM=0.181 tol=3.25
2024-07-13 02:06:24,976 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=39.9 pTM=0.247 ipTM=0.174 tol=9.12
2024-07-13 02:06:45,156 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=40.3 pTM=0.25 ipTM=0.178 tol=8.73
2024-07-13 02:07:05,326 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=40.2 pTM=0.248 ipTM=0.178 tol=5.08
2024-07-13 02:07:25,504 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=40.1 pTM=0.247 ipTM=0.167 tol=3.32
2024-07-13 02:07:45,678 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=40.3 pTM=0.249 ipTM=0.173 tol=2.8
2024-07-13 02:07:45,679 alphafold2_multimer_v3_model_2_seed_000 took 625.3s (30 recycles)
2024-07-13 02:08:06,441 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=33.2 pTM=0.202 ipTM=0.129
2024-07-13 02:08:26,686 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=33.2 pTM=0.224 ipTM=0.15 tol=17.8
2024-07-13 02:08:46,917 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=33 pTM=0.228 ipTM=0.144 tol=7.73
2024-07-13 02:09:07,141 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=32.9 pTM=0.231 ipTM=0.148 tol=10.9
2024-07-13 02:09:27,392 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=34.2 pTM=0.234 ipTM=0.143 tol=9.79
2024-07-13 02:09:47,630 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=33.5 pTM=0.239 ipTM=0.143 tol=5.62
2024-07-13 02:10:07,873 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=34.4 pTM=0.24 ipTM=0.151 tol=7.29
2024-07-13 02:10:28,124 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=34.1 pTM=0.241 ipTM=0.162 tol=4.86
2024-07-13 02:10:48,361 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=34.2 pTM=0.239 ipTM=0.159 tol=3.02
2024-07-13 02:11:08,613 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=33.9 pTM=0.239 ipTM=0.158 tol=3.53
2024-07-13 02:11:28,851 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=34.1 pTM=0.241 ipTM=0.158 tol=2.59
2024-07-13 02:11:49,089 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=33.6 pTM=0.235 ipTM=0.16 tol=2.94
2024-07-13 02:12:09,325 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=34.2 pTM=0.236 ipTM=0.16 tol=5.8
2024-07-13 02:12:29,557 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=33.7 pTM=0.236 ipTM=0.16 tol=5.5
2024-07-13 02:12:49,782 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=33.9 pTM=0.236 ipTM=0.156 tol=2.8
2024-07-13 02:13:10,005 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=34 pTM=0.24 ipTM=0.159 tol=3.01
2024-07-13 02:13:30,233 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=34.2 pTM=0.24 ipTM=0.156 tol=2.16
2024-07-13 02:13:50,451 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=34.4 pTM=0.242 ipTM=0.16 tol=1.65
2024-07-13 02:14:10,674 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=34.2 pTM=0.236 ipTM=0.16 tol=4.25
2024-07-13 02:14:30,890 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=34.3 pTM=0.24 ipTM=0.162 tol=4.08
2024-07-13 02:14:51,111 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=34 pTM=0.241 ipTM=0.162 tol=4.48
2024-07-13 02:15:11,324 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=34.4 pTM=0.238 ipTM=0.161 tol=4.75
2024-07-13 02:15:31,546 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=34.3 pTM=0.241 ipTM=0.162 tol=1.53
2024-07-13 02:15:51,774 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=34.5 pTM=0.24 ipTM=0.161 tol=1.62
2024-07-13 02:16:11,998 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=34.1 pTM=0.236 ipTM=0.16 tol=5.27
2024-07-13 02:16:32,218 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=34.4 pTM=0.241 ipTM=0.166 tol=5.42
2024-07-13 02:16:52,432 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=34.2 pTM=0.238 ipTM=0.161 tol=1.78
2024-07-13 02:17:12,643 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=34.3 pTM=0.238 ipTM=0.162 tol=2.13
2024-07-13 02:17:32,858 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=34.1 pTM=0.236 ipTM=0.161 tol=2.09
2024-07-13 02:17:53,077 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=33.8 pTM=0.234 ipTM=0.159 tol=7.04
2024-07-13 02:18:13,296 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=34.1 pTM=0.233 ipTM=0.16 tol=6.7
2024-07-13 02:18:13,297 alphafold2_multimer_v3_model_3_seed_000 took 627.1s (30 recycles)
2024-07-13 02:18:34,136 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=38.2 pTM=0.193 ipTM=0.129
2024-07-13 02:18:54,413 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=40.4 pTM=0.243 ipTM=0.138 tol=13.8
2024-07-13 02:19:14,693 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=40.8 pTM=0.257 ipTM=0.141 tol=11.2
2024-07-13 02:19:34,993 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=41.2 pTM=0.264 ipTM=0.138 tol=6.97
2024-07-13 02:19:55,302 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=41.4 pTM=0.266 ipTM=0.143 tol=7.37
2024-07-13 02:20:15,599 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=41.4 pTM=0.274 ipTM=0.139 tol=4.89
2024-07-13 02:20:35,902 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=41.7 pTM=0.273 ipTM=0.141 tol=3.64
2024-07-13 02:20:56,189 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=41.4 pTM=0.277 ipTM=0.142 tol=3.44
2024-07-13 02:21:16,470 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=41.6 pTM=0.279 ipTM=0.14 tol=8.39
2024-07-13 02:21:36,763 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=41.6 pTM=0.284 ipTM=0.145 tol=3.89
2024-07-13 02:21:57,047 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=41.8 pTM=0.282 ipTM=0.141 tol=8.36
2024-07-13 02:22:17,340 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=41.6 pTM=0.279 ipTM=0.143 tol=4.16
2024-07-13 02:22:37,640 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=41.7 pTM=0.279 ipTM=0.14 tol=4.39
2024-07-13 02:22:57,942 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=41.6 pTM=0.284 ipTM=0.146 tol=6.28
2024-07-13 02:23:18,256 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=41.7 pTM=0.281 ipTM=0.141 tol=12.6
2024-07-13 02:23:38,572 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=41.8 pTM=0.287 ipTM=0.144 tol=8.79
2024-07-13 02:23:58,862 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=41.6 pTM=0.289 ipTM=0.141 tol=5.51
2024-07-13 02:24:19,157 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=41.7 pTM=0.286 ipTM=0.146 tol=5.3
2024-07-13 02:24:39,438 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=41.6 pTM=0.286 ipTM=0.142 tol=3.26
2024-07-13 02:24:59,707 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=41.9 pTM=0.29 ipTM=0.149 tol=4.49
2024-07-13 02:25:19,968 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=41.7 pTM=0.293 ipTM=0.144 tol=5.18
2024-07-13 02:25:40,222 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=41.8 pTM=0.288 ipTM=0.146 tol=4.97
2024-07-13 02:26:00,472 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=41.5 pTM=0.29 ipTM=0.144 tol=5.92
2024-07-13 02:26:20,736 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=41.7 pTM=0.289 ipTM=0.145 tol=6.15
2024-07-13 02:26:41,005 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=41.6 pTM=0.289 ipTM=0.142 tol=7.49
2024-07-13 02:27:01,275 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=42 pTM=0.29 ipTM=0.145 tol=7.52
2024-07-13 02:27:21,543 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=41.8 pTM=0.288 ipTM=0.143 tol=8.26
2024-07-13 02:27:41,824 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=41.9 pTM=0.289 ipTM=0.147 tol=3.36
2024-07-13 02:28:02,116 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=41.5 pTM=0.284 ipTM=0.142 tol=6.56
2024-07-13 02:28:22,394 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=41.7 pTM=0.287 ipTM=0.147 tol=3.94
2024-07-13 02:28:42,661 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=41.8 pTM=0.287 ipTM=0.141 tol=4.22
2024-07-13 02:28:42,662 alphafold2_multimer_v3_model_4_seed_000 took 628.8s (30 recycles)
2024-07-13 02:29:03,492 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=38.8 pTM=0.244 ipTM=0.135
2024-07-13 02:29:23,784 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=37.2 pTM=0.231 ipTM=0.142 tol=24.6
2024-07-13 02:29:44,069 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=36.8 pTM=0.224 ipTM=0.14 tol=11.8
2024-07-13 02:30:04,351 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=36.7 pTM=0.225 ipTM=0.141 tol=10.1
2024-07-13 02:30:24,652 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=37.5 pTM=0.226 ipTM=0.142 tol=7.3
2024-07-13 02:30:44,934 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=36.7 pTM=0.229 ipTM=0.144 tol=7.4
2024-07-13 02:31:05,226 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=37.1 pTM=0.23 ipTM=0.143 tol=7.49
2024-07-13 02:31:25,495 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=36.7 pTM=0.231 ipTM=0.151 tol=5.66
2024-07-13 02:31:45,771 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=36.6 pTM=0.231 ipTM=0.153 tol=5.01
2024-07-13 02:32:06,038 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=36.4 pTM=0.23 ipTM=0.146 tol=5.57
2024-07-13 02:32:26,308 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=36.8 pTM=0.235 ipTM=0.145 tol=4.55
2024-07-13 02:32:46,588 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=36.2 pTM=0.23 ipTM=0.145 tol=4.03
2024-07-13 02:33:06,864 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=36.8 pTM=0.23 ipTM=0.144 tol=2.75
2024-07-13 02:33:27,122 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=36.2 pTM=0.23 ipTM=0.146 tol=3.72
2024-07-13 02:33:47,394 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=36.2 pTM=0.23 ipTM=0.144 tol=9
2024-07-13 02:34:07,675 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=36.4 pTM=0.232 ipTM=0.144 tol=4.07
2024-07-13 02:34:27,948 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=36.3 pTM=0.234 ipTM=0.142 tol=6.75
2024-07-13 02:34:48,219 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=36.5 pTM=0.232 ipTM=0.143 tol=9.03
2024-07-13 02:35:08,504 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=36.4 pTM=0.231 ipTM=0.144 tol=6.89
2024-07-13 02:35:28,795 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=36.5 pTM=0.231 ipTM=0.146 tol=7.36
2024-07-13 02:35:49,088 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=36 pTM=0.232 ipTM=0.146 tol=4.48
2024-07-13 02:36:09,383 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=36.5 pTM=0.231 ipTM=0.146 tol=8.95
2024-07-13 02:36:29,668 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=36.4 pTM=0.232 ipTM=0.145 tol=6.13
2024-07-13 02:36:49,951 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=36.2 pTM=0.228 ipTM=0.143 tol=5.88
2024-07-13 02:37:10,228 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=36 pTM=0.228 ipTM=0.143 tol=8.23
2024-07-13 02:37:30,515 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=36.3 pTM=0.229 ipTM=0.145 tol=8.09
2024-07-13 02:37:50,798 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=36.1 pTM=0.227 ipTM=0.144 tol=5.75
2024-07-13 02:38:11,090 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=36.1 pTM=0.229 ipTM=0.145 tol=10
2024-07-13 02:38:31,374 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=36.7 pTM=0.228 ipTM=0.141 tol=10.2
2024-07-13 02:38:51,663 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=36.1 pTM=0.226 ipTM=0.142 tol=9.02
2024-07-13 02:39:11,936 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=36.3 pTM=0.229 ipTM=0.144 tol=9.84
2024-07-13 02:39:11,937 alphafold2_multimer_v3_model_5_seed_000 took 628.7s (30 recycles)
2024-07-13 02:39:12,488 reranking models by 'multimer' metric
2024-07-13 02:39:35,287 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-13 02:41:19,835 Relaxation took 127.3s
2024-07-13 02:41:19,835 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=40.3 pTM=0.249 ipTM=0.173
2024-07-13 02:42:48,377 Relaxation took 88.5s
2024-07-13 02:42:48,377 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=34.1 pTM=0.233 ipTM=0.16
2024-07-13 02:44:27,319 Relaxation took 98.9s
2024-07-13 02:44:27,320 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=41.8 pTM=0.287 ipTM=0.141
2024-07-13 02:46:17,354 Relaxation took 110.0s
2024-07-13 02:46:17,354 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=36.3 pTM=0.229 ipTM=0.144
2024-07-13 02:48:27,402 Relaxation took 130.0s
2024-07-13 02:48:27,403 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=37.3 pTM=0.202 ipTM=0.139
2024-07-13 02:48:31,307 Done