2024-07-13 02:06:45,836 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-13 02:06:46,165 Running on GPU 2024-07-13 02:07:00,304 Found 6 citations for tools or databases 2024-07-13 02:07:00,304 Query 1/1: SHRM1_GPR15 (length 1212) 2024-07-13 02:07:00,849 Sleeping for 6s. Reason: PENDING 2024-07-13 02:07:07,268 Sleeping for 10s. Reason: RUNNING 2024-07-13 02:07:17,696 Sleeping for 7s. Reason: RUNNING 2024-07-13 02:07:25,148 Sleeping for 10s. Reason: RUNNING 2024-07-13 02:07:35,600 Sleeping for 5s. Reason: RUNNING 2024-07-13 02:07:41,012 Sleeping for 6s. Reason: RUNNING 2024-07-13 02:07:47,463 Sleeping for 6s. Reason: RUNNING 2024-07-13 02:07:53,885 Sleeping for 5s. Reason: RUNNING 2024-07-13 02:07:59,337 Sleeping for 9s. Reason: RUNNING 2024-07-13 02:08:08,756 Sleeping for 9s. Reason: RUNNING 2024-07-13 02:08:18,186 Sleeping for 9s. Reason: RUNNING 2024-07-13 02:08:27,632 Sleeping for 6s. Reason: RUNNING 2024-07-13 02:08:34,056 Sleeping for 8s. Reason: RUNNING 2024-07-13 02:08:42,470 Sleeping for 5s. Reason: RUNNING 2024-07-13 02:08:47,877 Sleeping for 5s. Reason: RUNNING 2024-07-13 02:08:53,303 Sleeping for 9s. Reason: RUNNING 2024-07-13 02:09:04,365 Sleeping for 8s. Reason: PENDING 2024-07-13 02:09:12,789 Sleeping for 5s. Reason: RUNNING 2024-07-13 02:09:18,199 Sleeping for 10s. Reason: RUNNING 2024-07-13 02:09:28,620 Sleeping for 10s. Reason: RUNNING 2024-07-13 02:09:39,052 Sleeping for 5s. Reason: RUNNING 2024-07-13 02:09:44,468 Sleeping for 6s. Reason: RUNNING 2024-07-13 02:09:50,896 Sleeping for 10s. Reason: RUNNING 2024-07-13 02:10:01,314 Sleeping for 9s. Reason: RUNNING 2024-07-13 02:10:10,757 Sleeping for 10s. Reason: RUNNING 2024-07-13 02:10:21,169 Sleeping for 10s. Reason: RUNNING 2024-07-13 02:10:31,583 Sleeping for 5s. Reason: RUNNING 2024-07-13 02:10:37,007 Sleeping for 6s. Reason: RUNNING 2024-07-13 02:10:45,622 Setting max_seq=508, max_extra_seq=2048 2024-07-13 02:14:21,572 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=44.7 pTM=0.359 ipTM=0.263 2024-07-13 02:14:56,761 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=44.9 pTM=0.353 ipTM=0.255 tol=13.6 2024-07-13 02:15:32,087 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=44.7 pTM=0.349 ipTM=0.228 tol=9.64 2024-07-13 02:16:07,501 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=44.7 pTM=0.347 ipTM=0.21 tol=6.59 2024-07-13 02:16:42,950 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=44.7 pTM=0.35 ipTM=0.375 tol=11.9 2024-07-13 02:17:18,426 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=44.8 pTM=0.353 ipTM=0.35 tol=9.39 2024-07-13 02:17:53,901 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=45 pTM=0.354 ipTM=0.408 tol=5.13 2024-07-13 02:18:29,342 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=45.2 pTM=0.355 ipTM=0.372 tol=8.16 2024-07-13 02:19:04,789 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=44.9 pTM=0.353 ipTM=0.42 tol=5.16 2024-07-13 02:19:40,255 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=45.2 pTM=0.353 ipTM=0.404 tol=3.9 2024-07-13 02:20:15,736 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=45.2 pTM=0.354 ipTM=0.406 tol=9.59 2024-07-13 02:20:51,224 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=44.9 pTM=0.355 ipTM=0.393 tol=6.39 2024-07-13 02:21:26,711 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=45 pTM=0.356 ipTM=0.406 tol=8.04 2024-07-13 02:22:02,184 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=44.9 pTM=0.357 ipTM=0.419 tol=8.18 2024-07-13 02:22:37,648 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=44.8 pTM=0.358 ipTM=0.417 tol=4.17 2024-07-13 02:23:13,131 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=45 pTM=0.357 ipTM=0.426 tol=2.59 2024-07-13 02:23:48,636 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=45.2 pTM=0.357 ipTM=0.419 tol=7.21 2024-07-13 02:24:24,142 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=45.3 pTM=0.357 ipTM=0.423 tol=3 2024-07-13 02:24:59,647 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=45.2 pTM=0.357 ipTM=0.42 tol=6.84 2024-07-13 02:25:35,133 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=45 pTM=0.357 ipTM=0.426 tol=3.25 2024-07-13 02:26:10,591 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=45.2 pTM=0.358 ipTM=0.42 tol=8.54 2024-07-13 02:26:46,077 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=45.3 pTM=0.357 ipTM=0.43 tol=5.34 2024-07-13 02:27:21,545 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=44.9 pTM=0.358 ipTM=0.42 tol=3.78 2024-07-13 02:27:57,035 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=45 pTM=0.358 ipTM=0.42 tol=6.95 2024-07-13 02:28:32,534 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=45.3 pTM=0.358 ipTM=0.416 tol=6.37 2024-07-13 02:29:07,988 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=45.3 pTM=0.356 ipTM=0.409 tol=2.88 2024-07-13 02:29:43,469 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=45 pTM=0.355 ipTM=0.414 tol=2.77 2024-07-13 02:30:18,965 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=45.2 pTM=0.357 ipTM=0.422 tol=3.01 2024-07-13 02:30:54,463 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=45.2 pTM=0.357 ipTM=0.426 tol=3.87 2024-07-13 02:31:29,974 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=45.1 pTM=0.356 ipTM=0.433 tol=4.01 2024-07-13 02:32:05,462 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=45 pTM=0.357 ipTM=0.418 tol=6.46 2024-07-13 02:32:05,463 alphafold2_multimer_v3_model_1_seed_000 took 1224.5s (30 recycles) 2024-07-13 02:32:41,651 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=44.6 pTM=0.362 ipTM=0.236 2024-07-13 02:33:17,018 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=44.8 pTM=0.357 ipTM=0.247 tol=13.1 2024-07-13 02:33:52,415 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=45.3 pTM=0.354 ipTM=0.242 tol=7.04 2024-07-13 02:34:27,824 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=45.3 pTM=0.352 ipTM=0.24 tol=3.59 2024-07-13 02:35:03,263 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=45.4 pTM=0.354 ipTM=0.233 tol=7.61 2024-07-13 02:35:38,719 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=45.6 pTM=0.356 ipTM=0.326 tol=6.64 2024-07-13 02:36:14,181 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=45.8 pTM=0.356 ipTM=0.346 tol=7.8 2024-07-13 02:36:49,615 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=45.7 pTM=0.355 ipTM=0.335 tol=9.9 2024-07-13 02:37:25,053 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=45.4 pTM=0.355 ipTM=0.363 tol=7.43 2024-07-13 02:38:00,505 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=45.6 pTM=0.354 ipTM=0.32 tol=6.62 2024-07-13 02:38:35,965 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=45.6 pTM=0.354 ipTM=0.355 tol=4.36 2024-07-13 02:39:11,423 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=45.3 pTM=0.354 ipTM=0.348 tol=6.21 2024-07-13 02:39:46,870 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=45.8 pTM=0.356 ipTM=0.341 tol=7.84 2024-07-13 02:40:22,306 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=45.6 pTM=0.357 ipTM=0.372 tol=4.75 2024-07-13 02:40:57,782 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=45.7 pTM=0.353 ipTM=0.342 tol=2.79 2024-07-13 02:41:33,205 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=45.6 pTM=0.354 ipTM=0.368 tol=2.85 2024-07-13 02:42:08,631 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=45.6 pTM=0.353 ipTM=0.326 tol=3.58 2024-07-13 02:42:44,093 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=45.8 pTM=0.355 ipTM=0.375 tol=4.03 2024-07-13 02:43:19,502 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=46 pTM=0.354 ipTM=0.342 tol=3.87 2024-07-13 02:43:54,937 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=45.5 pTM=0.352 ipTM=0.372 tol=2.31 2024-07-13 02:44:30,388 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=45.6 pTM=0.352 ipTM=0.353 tol=3.7 2024-07-13 02:45:05,829 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=45.7 pTM=0.352 ipTM=0.376 tol=3.06 2024-07-13 02:45:41,272 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=45.6 pTM=0.353 ipTM=0.363 tol=3.48 2024-07-13 02:46:16,721 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=45.6 pTM=0.351 ipTM=0.343 tol=4.27 2024-07-13 02:46:52,148 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=45.9 pTM=0.353 ipTM=0.363 tol=3.83 2024-07-13 02:47:27,577 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=45.8 pTM=0.352 ipTM=0.328 tol=6.71 2024-07-13 02:48:02,990 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=45.7 pTM=0.353 ipTM=0.379 tol=5.89 2024-07-13 02:48:38,442 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=45.8 pTM=0.353 ipTM=0.351 tol=7.04 2024-07-13 02:49:13,894 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=45.8 pTM=0.354 ipTM=0.371 tol=7.8 2024-07-13 02:49:49,335 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=45.8 pTM=0.354 ipTM=0.353 tol=2.89 2024-07-13 02:50:24,779 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=45.6 pTM=0.353 ipTM=0.371 tol=2.77 2024-07-13 02:50:24,780 alphafold2_multimer_v3_model_2_seed_000 took 1098.4s (30 recycles) 2024-07-13 02:51:01,166 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=45.6 pTM=0.37 ipTM=0.255 2024-07-13 02:51:36,694 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=45.8 pTM=0.367 ipTM=0.249 tol=17.4 2024-07-13 02:52:12,223 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=46.1 pTM=0.376 ipTM=0.311 tol=8.08 2024-07-13 02:52:47,716 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=45.8 pTM=0.372 ipTM=0.268 tol=7.21 2024-07-13 02:53:23,260 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=46 pTM=0.375 ipTM=0.286 tol=6.23 2024-07-13 02:53:58,787 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=46.1 pTM=0.375 ipTM=0.314 tol=5.37 2024-07-13 02:54:34,318 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=46.3 pTM=0.378 ipTM=0.309 tol=4.38 2024-07-13 02:55:09,882 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=46.6 pTM=0.38 ipTM=0.322 tol=7.96 2024-07-13 02:55:45,429 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=46.1 pTM=0.374 ipTM=0.306 tol=7.46 2024-07-13 02:56:20,998 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=46.4 pTM=0.375 ipTM=0.312 tol=5.57 2024-07-13 02:56:56,576 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=46.2 pTM=0.375 ipTM=0.317 tol=7.54 2024-07-13 02:57:32,168 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=46 pTM=0.372 ipTM=0.296 tol=9.9 2024-07-13 02:58:07,763 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=46 pTM=0.374 ipTM=0.307 tol=5.7 2024-07-13 02:58:43,332 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=46.1 pTM=0.376 ipTM=0.309 tol=6.83 2024-07-13 02:59:18,894 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=45.9 pTM=0.372 ipTM=0.294 tol=10.1 2024-07-13 02:59:54,460 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=45.6 pTM=0.369 ipTM=0.283 tol=7.57 2024-07-13 03:00:30,043 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=46 pTM=0.373 ipTM=0.302 tol=4.24 2024-07-13 03:01:05,644 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=46 pTM=0.373 ipTM=0.302 tol=9.85 2024-07-13 03:01:41,213 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=46.1 pTM=0.373 ipTM=0.299 tol=8.87 2024-07-13 03:02:16,771 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=45.9 pTM=0.373 ipTM=0.321 tol=5.35 2024-07-13 03:02:52,318 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=45.9 pTM=0.372 ipTM=0.301 tol=4.18 2024-07-13 03:03:27,900 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=46.1 pTM=0.376 ipTM=0.328 tol=9.78 2024-07-13 03:04:03,453 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=45.9 pTM=0.373 ipTM=0.307 tol=5.25 2024-07-13 03:04:38,971 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=45.8 pTM=0.372 ipTM=0.301 tol=7.68 2024-07-13 03:05:14,508 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=46.2 pTM=0.377 ipTM=0.319 tol=7.87 2024-07-13 03:05:50,092 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=46.3 pTM=0.375 ipTM=0.31 tol=7.24 2024-07-13 03:06:25,674 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=45.9 pTM=0.372 ipTM=0.296 tol=7.34 2024-07-13 03:07:01,226 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=46 pTM=0.376 ipTM=0.313 tol=4.19 2024-07-13 03:07:36,793 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=45.8 pTM=0.371 ipTM=0.292 tol=3.87 2024-07-13 03:08:12,344 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=46.1 pTM=0.376 ipTM=0.333 tol=4.57 2024-07-13 03:08:47,905 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=45.9 pTM=0.372 ipTM=0.297 tol=5.03 2024-07-13 03:08:47,906 alphafold2_multimer_v3_model_3_seed_000 took 1102.2s (30 recycles) 2024-07-13 03:09:24,306 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=43.1 pTM=0.381 ipTM=0.293 2024-07-13 03:09:59,841 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=44.4 pTM=0.375 ipTM=0.312 tol=23 2024-07-13 03:10:35,388 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=43.9 pTM=0.369 ipTM=0.302 tol=15.4 2024-07-13 03:11:10,954 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=44.2 pTM=0.365 ipTM=0.293 tol=12.8 2024-07-13 03:11:46,533 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=44 pTM=0.364 ipTM=0.308 tol=12 2024-07-13 03:12:22,112 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=44.2 pTM=0.363 ipTM=0.312 tol=12.8 2024-07-13 03:12:57,676 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=44.2 pTM=0.364 ipTM=0.301 tol=13.2 2024-07-13 03:13:33,209 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=44.6 pTM=0.37 ipTM=0.295 tol=13.9 2024-07-13 03:14:08,757 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=43.9 pTM=0.365 ipTM=0.269 tol=9.09 2024-07-13 03:14:44,340 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=44.2 pTM=0.361 ipTM=0.24 tol=9.76 2024-07-13 03:15:19,958 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=43.5 pTM=0.357 ipTM=0.226 tol=19.9 2024-07-13 03:15:55,589 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=43.7 pTM=0.359 ipTM=0.218 tol=15.9 2024-07-13 03:16:31,240 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=43.7 pTM=0.36 ipTM=0.228 tol=11.6 2024-07-13 03:17:06,908 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=44.1 pTM=0.359 ipTM=0.234 tol=13.4 2024-07-13 03:17:42,537 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=43.4 pTM=0.358 ipTM=0.228 tol=14.2 2024-07-13 03:18:18,165 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=43.3 pTM=0.36 ipTM=0.22 tol=19.8 2024-07-13 03:18:53,754 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=43.6 pTM=0.358 ipTM=0.213 tol=13.3 2024-07-13 03:19:29,349 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=44 pTM=0.361 ipTM=0.22 tol=11.3 2024-07-13 03:20:04,926 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=43.8 pTM=0.358 ipTM=0.219 tol=16.6 2024-07-13 03:20:40,496 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=43.7 pTM=0.357 ipTM=0.213 tol=12.9 2024-07-13 03:21:16,088 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=43.6 pTM=0.361 ipTM=0.229 tol=12.1 2024-07-13 03:21:51,651 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=43.8 pTM=0.361 ipTM=0.226 tol=12.8 2024-07-13 03:22:27,180 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=43.5 pTM=0.357 ipTM=0.231 tol=13.5 2024-07-13 03:23:02,724 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=43.2 pTM=0.356 ipTM=0.218 tol=14 2024-07-13 03:23:38,223 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=43.6 pTM=0.365 ipTM=0.248 tol=19.5 2024-07-13 03:24:13,772 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=43.7 pTM=0.357 ipTM=0.22 tol=13.5 2024-07-13 03:24:49,363 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=43.3 pTM=0.358 ipTM=0.218 tol=11.8 2024-07-13 03:25:25,024 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=43.9 pTM=0.357 ipTM=0.217 tol=13.8 2024-07-13 03:26:00,605 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=43.7 pTM=0.358 ipTM=0.214 tol=7.58 2024-07-13 03:26:36,142 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=43.6 pTM=0.362 ipTM=0.237 tol=11.4 2024-07-13 03:27:11,693 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=43.5 pTM=0.359 ipTM=0.22 tol=6.7 2024-07-13 03:27:11,695 alphafold2_multimer_v3_model_4_seed_000 took 1102.9s (30 recycles) 2024-07-13 03:27:48,181 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=44.9 pTM=0.378 ipTM=0.287 2024-07-13 03:28:23,786 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=46.1 pTM=0.368 ipTM=0.237 tol=14.4 2024-07-13 03:28:59,404 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=46.4 pTM=0.373 ipTM=0.236 tol=11.8 2024-07-13 03:29:35,020 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=46.1 pTM=0.375 ipTM=0.254 tol=10.3 2024-07-13 03:30:10,619 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=46.1 pTM=0.378 ipTM=0.258 tol=7.88 2024-07-13 03:30:46,232 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=46.2 pTM=0.381 ipTM=0.27 tol=6.37 2024-07-13 03:31:21,852 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=46.2 pTM=0.379 ipTM=0.269 tol=7.62 2024-07-13 03:31:57,463 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=46.2 pTM=0.38 ipTM=0.269 tol=6.28 2024-07-13 03:32:33,068 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=46.1 pTM=0.381 ipTM=0.277 tol=4.95 2024-07-13 03:33:08,702 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=46.3 pTM=0.379 ipTM=0.275 tol=5.02 2024-07-13 03:33:44,325 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=46.1 pTM=0.379 ipTM=0.275 tol=7.94 2024-07-13 03:34:19,953 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=46.3 pTM=0.38 ipTM=0.276 tol=9.54 2024-07-13 03:34:55,558 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=46.2 pTM=0.383 ipTM=0.288 tol=8.47 2024-07-13 03:35:31,164 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=46.3 pTM=0.387 ipTM=0.312 tol=8.65 2024-07-13 03:36:06,762 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=46.2 pTM=0.381 ipTM=0.28 tol=5.71 2024-07-13 03:36:42,364 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=45.9 pTM=0.375 ipTM=0.261 tol=3.92 2024-07-13 03:37:17,980 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=46.1 pTM=0.379 ipTM=0.275 tol=4.12 2024-07-13 03:37:53,581 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=46.2 pTM=0.381 ipTM=0.282 tol=6.65 2024-07-13 03:38:29,174 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=46.2 pTM=0.377 ipTM=0.273 tol=6.76 2024-07-13 03:39:04,795 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=46 pTM=0.379 ipTM=0.278 tol=4.29 2024-07-13 03:39:40,397 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=46.2 pTM=0.382 ipTM=0.289 tol=3.57 2024-07-13 03:40:16,018 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=46.2 pTM=0.379 ipTM=0.274 tol=4.33 2024-07-13 03:40:51,599 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=46 pTM=0.378 ipTM=0.268 tol=3.88 2024-07-13 03:41:27,190 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=46 pTM=0.379 ipTM=0.27 tol=3.05 2024-07-13 03:42:02,805 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=46.3 pTM=0.377 ipTM=0.27 tol=2.27 2024-07-13 03:42:38,384 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=46.3 pTM=0.384 ipTM=0.294 tol=3.66 2024-07-13 03:43:13,965 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=46.1 pTM=0.378 ipTM=0.273 tol=9.66 2024-07-13 03:43:49,525 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=46.4 pTM=0.379 ipTM=0.278 tol=8.6 2024-07-13 03:44:25,114 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=46.2 pTM=0.38 ipTM=0.281 tol=4.82 2024-07-13 03:45:00,704 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=46.4 pTM=0.381 ipTM=0.287 tol=4.33 2024-07-13 03:45:36,326 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=46.2 pTM=0.377 ipTM=0.268 tol=3.14 2024-07-13 03:45:36,327 alphafold2_multimer_v3_model_5_seed_000 took 1103.7s (30 recycles) 2024-07-13 03:45:38,161 reranking models by 'multimer' metric 2024-07-13 03:45:41,049 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-13 03:48:26,931 Relaxation took 168.8s 2024-07-13 03:48:26,932 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=45 pTM=0.357 ipTM=0.418 2024-07-13 03:50:39,967 Relaxation took 133.0s 2024-07-13 03:50:39,967 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=45.6 pTM=0.353 ipTM=0.371 2024-07-13 03:52:50,422 Relaxation took 130.5s 2024-07-13 03:52:50,422 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=45.9 pTM=0.372 ipTM=0.297 2024-07-13 03:54:57,841 Relaxation took 127.4s 2024-07-13 03:54:57,842 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=46.2 pTM=0.377 ipTM=0.268 2024-07-13 03:57:41,318 Relaxation took 163.5s 2024-07-13 03:57:41,318 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=43.5 pTM=0.359 ipTM=0.22 2024-07-13 03:57:45,322 Done