2024-07-13 03:15:34,278 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 03:15:34,621 Running on GPU
2024-07-13 03:15:43,031 Found 6 citations for tools or databases
2024-07-13 03:15:43,032 Query 1/1: SKT_NKRF (length 2633)
2024-07-13 03:15:43,479 Sleeping for 8s. Reason: PENDING
2024-07-13 03:15:51,905 Sleeping for 8s. Reason: RUNNING
2024-07-13 03:16:00,321 Sleeping for 7s. Reason: RUNNING
2024-07-13 03:16:07,752 Sleeping for 10s. Reason: RUNNING
2024-07-13 03:16:18,169 Sleeping for 7s. Reason: RUNNING
2024-07-13 03:16:25,585 Sleeping for 10s. Reason: RUNNING
2024-07-13 03:16:36,024 Sleeping for 7s. Reason: RUNNING
2024-07-13 03:16:43,446 Sleeping for 8s. Reason: RUNNING
2024-07-13 03:16:51,879 Sleeping for 7s. Reason: RUNNING
2024-07-13 03:16:59,295 Sleeping for 7s. Reason: RUNNING
2024-07-13 03:17:11,377 Sleeping for 6s. Reason: PENDING
2024-07-13 03:17:17,794 Sleeping for 10s. Reason: RUNNING
2024-07-13 03:17:28,212 Sleeping for 7s. Reason: RUNNING
2024-07-13 03:17:35,629 Sleeping for 6s. Reason: RUNNING
2024-07-13 03:17:42,050 Sleeping for 7s. Reason: RUNNING
2024-07-13 03:17:49,477 Sleeping for 5s. Reason: RUNNING
2024-07-13 03:17:54,919 Sleeping for 6s. Reason: RUNNING
2024-07-13 03:18:01,320 Sleeping for 9s. Reason: RUNNING
2024-07-13 03:18:10,749 Sleeping for 7s. Reason: RUNNING
2024-07-13 03:18:18,175 Sleeping for 6s. Reason: RUNNING
2024-07-13 03:18:28,622 Setting max_seq=508, max_extra_seq=2048
2024-07-13 03:28:48,506 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=31.7 pTM=0.276 ipTM=0.225
2024-07-13 03:34:53,997 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=30 pTM=0.265 ipTM=0.235 tol=22.9
2024-07-13 03:40:59,467 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=29.9 pTM=0.261 ipTM=0.236 tol=17.9
2024-07-13 03:47:04,924 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=29.7 pTM=0.263 ipTM=0.239 tol=16.2
2024-07-13 03:53:10,366 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=29.7 pTM=0.261 ipTM=0.241 tol=16.6
2024-07-13 03:59:15,739 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=29.5 pTM=0.263 ipTM=0.239 tol=10.4
2024-07-13 04:05:21,295 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=29.6 pTM=0.261 ipTM=0.238 tol=10.4
2024-07-13 04:11:26,867 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=29.3 pTM=0.263 ipTM=0.237 tol=9.63
2024-07-13 04:17:32,338 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=29.5 pTM=0.263 ipTM=0.239 tol=7.62
2024-07-13 04:23:37,886 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=29.3 pTM=0.263 ipTM=0.239 tol=10.8
2024-07-13 04:29:43,333 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=29.6 pTM=0.262 ipTM=0.24 tol=10.1
2024-07-13 04:35:48,929 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=29.5 pTM=0.262 ipTM=0.241 tol=9.27
2024-07-13 04:41:54,419 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=29.4 pTM=0.263 ipTM=0.239 tol=6.86
2024-07-13 04:47:59,943 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=29.3 pTM=0.263 ipTM=0.239 tol=6.34
2024-07-13 04:54:05,501 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=29.2 pTM=0.262 ipTM=0.239 tol=9.55
2024-07-13 05:00:11,109 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=29.3 pTM=0.262 ipTM=0.237 tol=13.5
2024-07-13 05:06:16,788 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=29.4 pTM=0.263 ipTM=0.237 tol=13.1
2024-07-13 05:12:22,296 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=29.2 pTM=0.262 ipTM=0.24 tol=12.6
2024-07-13 05:18:27,830 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=29.5 pTM=0.263 ipTM=0.238 tol=10.1
2024-07-13 05:24:33,316 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=29.8 pTM=0.262 ipTM=0.238 tol=12.8
2024-07-13 05:30:38,842 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=29.8 pTM=0.263 ipTM=0.239 tol=11
2024-07-13 05:36:44,433 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=30 pTM=0.264 ipTM=0.24 tol=8.53
2024-07-13 05:42:50,024 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=29.8 pTM=0.262 ipTM=0.24 tol=8.58
2024-07-13 05:48:55,649 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=29.8 pTM=0.263 ipTM=0.24 tol=8.18
2024-07-13 05:55:01,238 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=29.9 pTM=0.263 ipTM=0.241 tol=11.4
2024-07-13 06:01:06,849 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=29.9 pTM=0.263 ipTM=0.241 tol=16.2
2024-07-13 06:07:12,431 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=30 pTM=0.263 ipTM=0.24 tol=14.4
2024-07-13 06:13:17,920 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=29.9 pTM=0.263 ipTM=0.24 tol=9.78
2024-07-13 06:19:23,550 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=29.9 pTM=0.262 ipTM=0.24 tol=7.04
2024-07-13 06:25:29,184 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=29.7 pTM=0.263 ipTM=0.24 tol=8.32
2024-07-13 06:31:34,813 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=29.9 pTM=0.263 ipTM=0.241 tol=6.77
2024-07-13 06:31:34,816 alphafold2_multimer_v3_model_1_seed_000 took 11532.9s (30 recycles)
2024-07-13 06:37:44,300 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=31.5 pTM=0.283 ipTM=0.223
2024-07-13 06:43:49,799 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=32.5 pTM=0.266 ipTM=0.218 tol=23
2024-07-13 06:49:55,465 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=32.7 pTM=0.26 ipTM=0.224 tol=20.8
2024-07-13 06:56:01,141 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=33.1 pTM=0.26 ipTM=0.223 tol=15.3
2024-07-13 07:02:06,810 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=33.2 pTM=0.26 ipTM=0.228 tol=15.9
2024-07-13 07:08:12,422 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=33.1 pTM=0.26 ipTM=0.229 tol=11
2024-07-13 07:14:17,986 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=33.2 pTM=0.259 ipTM=0.228 tol=9.32
2024-07-13 07:20:23,584 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=33 pTM=0.258 ipTM=0.225 tol=10.2
2024-07-13 07:26:29,148 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=33.1 pTM=0.259 ipTM=0.225 tol=8.06
2024-07-13 07:32:34,751 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=33 pTM=0.259 ipTM=0.225 tol=7.07
2024-07-13 07:38:40,313 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=33 pTM=0.259 ipTM=0.225 tol=13.2
2024-07-13 07:44:45,919 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=33.2 pTM=0.26 ipTM=0.224 tol=11.2
2024-07-13 07:50:51,466 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=33.2 pTM=0.26 ipTM=0.225 tol=11.6
2024-07-13 07:56:57,188 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=33.2 pTM=0.26 ipTM=0.222 tol=10.7
2024-07-13 08:03:02,881 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=33.3 pTM=0.261 ipTM=0.223 tol=11.3
2024-07-13 08:09:08,655 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=33.5 pTM=0.262 ipTM=0.221 tol=8.65
2024-07-13 08:15:14,430 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=33.6 pTM=0.261 ipTM=0.225 tol=9.03
2024-07-13 08:21:20,275 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=33.5 pTM=0.26 ipTM=0.224 tol=9.08
2024-07-13 08:27:26,076 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=33.7 pTM=0.259 ipTM=0.223 tol=9.41
2024-07-13 08:33:31,799 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=33.6 pTM=0.26 ipTM=0.221 tol=9.65
2024-07-13 08:39:37,502 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=33.7 pTM=0.26 ipTM=0.224 tol=8.96
2024-07-13 08:45:43,291 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=33.7 pTM=0.26 ipTM=0.224 tol=9.25
2024-07-13 08:51:49,051 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=33.5 pTM=0.26 ipTM=0.224 tol=10
2024-07-13 08:57:54,903 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=33.6 pTM=0.26 ipTM=0.223 tol=10
2024-07-13 09:04:00,716 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=33.6 pTM=0.259 ipTM=0.223 tol=9.3
2024-07-13 09:10:06,447 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=33.5 pTM=0.259 ipTM=0.221 tol=9.32
2024-07-13 09:16:12,167 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=33.7 pTM=0.26 ipTM=0.225 tol=9.11
2024-07-13 09:22:17,831 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=33.7 pTM=0.26 ipTM=0.224 tol=8.76
2024-07-13 09:28:23,464 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=33.6 pTM=0.26 ipTM=0.226 tol=8.72
2024-07-13 09:34:29,131 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=33.6 pTM=0.26 ipTM=0.222 tol=6.57
2024-07-13 09:40:34,865 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=33.5 pTM=0.26 ipTM=0.225 tol=7.53
2024-07-13 09:40:34,869 alphafold2_multimer_v3_model_2_seed_000 took 11335.5s (30 recycles)
2024-07-13 09:46:45,242 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=31.3 pTM=0.272 ipTM=0.224
2024-07-13 09:52:52,080 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=31.1 pTM=0.262 ipTM=0.215 tol=26.9
2024-07-13 09:58:58,735 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=31.3 pTM=0.264 ipTM=0.22 tol=23.6
2024-07-13 10:05:05,660 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=31.5 pTM=0.262 ipTM=0.22 tol=20.4
2024-07-13 10:11:12,581 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=32 pTM=0.263 ipTM=0.224 tol=22.5
2024-07-13 10:17:19,546 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=31.7 pTM=0.263 ipTM=0.222 tol=18.7
2024-07-13 10:23:26,577 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=31.9 pTM=0.263 ipTM=0.225 tol=15.6
2024-07-13 10:29:33,535 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=31.7 pTM=0.263 ipTM=0.226 tol=12
2024-07-13 10:35:40,541 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=32 pTM=0.264 ipTM=0.226 tol=12.6
2024-07-13 10:41:47,693 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=31.7 pTM=0.264 ipTM=0.226 tol=10.6
2024-07-13 10:47:54,766 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=32 pTM=0.265 ipTM=0.226 tol=11.3
2024-07-13 10:54:01,865 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=31.8 pTM=0.265 ipTM=0.227 tol=9.57
2024-07-13 11:00:08,913 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=32 pTM=0.266 ipTM=0.227 tol=9.95
2024-07-13 11:06:16,099 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=32.2 pTM=0.266 ipTM=0.228 tol=22.5
2024-07-13 11:12:23,292 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=31.9 pTM=0.266 ipTM=0.226 tol=13.7
2024-07-13 11:18:30,461 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=32 pTM=0.267 ipTM=0.229 tol=21.7
2024-07-13 11:24:37,609 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=31.7 pTM=0.266 ipTM=0.225 tol=20
2024-07-13 11:30:44,753 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=32.1 pTM=0.266 ipTM=0.228 tol=20
2024-07-13 11:36:51,897 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=32.3 pTM=0.267 ipTM=0.227 tol=12.6
2024-07-13 11:42:58,925 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=32.4 pTM=0.269 ipTM=0.228 tol=10.2
2024-07-13 11:49:05,777 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=32.3 pTM=0.268 ipTM=0.229 tol=21.2
2024-07-13 11:55:12,840 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=32.3 pTM=0.268 ipTM=0.226 tol=9.87
2024-07-13 12:01:19,901 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=32.2 pTM=0.268 ipTM=0.228 tol=9.63
2024-07-13 12:07:26,997 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=32.2 pTM=0.269 ipTM=0.228 tol=8.69
2024-07-13 12:13:34,064 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=32.2 pTM=0.268 ipTM=0.229 tol=7.8
2024-07-13 12:19:41,206 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=32.3 pTM=0.267 ipTM=0.228 tol=22.5
2024-07-13 12:25:48,329 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=32.4 pTM=0.267 ipTM=0.228 tol=16.1
2024-07-13 12:31:55,355 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=32.3 pTM=0.268 ipTM=0.228 tol=8.59
2024-07-13 12:38:02,446 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=32.3 pTM=0.27 ipTM=0.228 tol=24.1
2024-07-13 12:44:09,476 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=32.3 pTM=0.267 ipTM=0.227 tol=22.2
2024-07-13 12:50:16,372 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=32 pTM=0.267 ipTM=0.226 tol=20.8
2024-07-13 12:50:16,375 alphafold2_multimer_v3_model_3_seed_000 took 11377.6s (30 recycles)
2024-07-13 12:56:26,870 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=30.9 pTM=0.262 ipTM=0.217
2024-07-13 13:02:34,754 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=30.4 pTM=0.257 ipTM=0.226 tol=27
2024-07-13 13:08:42,480 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=30.6 pTM=0.257 ipTM=0.231 tol=21.1
2024-07-13 13:14:50,389 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=30.6 pTM=0.257 ipTM=0.232 tol=17.4
2024-07-13 13:20:58,300 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=30.6 pTM=0.257 ipTM=0.234 tol=23.3
2024-07-13 13:27:06,473 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=30.8 pTM=0.257 ipTM=0.232 tol=24.3
2024-07-13 13:33:14,483 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=30.6 pTM=0.258 ipTM=0.232 tol=24.6
2024-07-13 13:39:22,397 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=30.5 pTM=0.258 ipTM=0.23 tol=22.4
2024-07-13 13:45:30,375 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=30.6 pTM=0.258 ipTM=0.229 tol=18.1
2024-07-13 13:51:38,287 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=30.5 pTM=0.258 ipTM=0.229 tol=18
2024-07-13 13:57:46,166 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=30.5 pTM=0.258 ipTM=0.229 tol=22.1
2024-07-13 14:03:53,875 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=30.6 pTM=0.259 ipTM=0.229 tol=15.5
2024-07-13 14:10:01,708 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=30.4 pTM=0.26 ipTM=0.23 tol=19.2
2024-07-13 14:16:09,507 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=30.6 pTM=0.259 ipTM=0.231 tol=20.5
2024-07-13 14:22:17,335 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=30.5 pTM=0.259 ipTM=0.23 tol=17.9
2024-07-13 14:28:25,026 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=30.7 pTM=0.259 ipTM=0.232 tol=16.5
2024-07-13 14:34:32,833 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=30.6 pTM=0.259 ipTM=0.232 tol=14.8
2024-07-13 14:40:40,678 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=30.6 pTM=0.26 ipTM=0.233 tol=15
2024-07-13 14:46:48,442 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=30.7 pTM=0.259 ipTM=0.231 tol=20.2
2024-07-13 14:52:56,348 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=30.7 pTM=0.26 ipTM=0.231 tol=19.7
2024-07-13 14:59:04,278 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=30.4 pTM=0.259 ipTM=0.229 tol=13.5
2024-07-13 15:05:12,125 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=30.7 pTM=0.26 ipTM=0.229 tol=22.7
2024-07-13 15:11:19,998 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=30.6 pTM=0.259 ipTM=0.231 tol=22.2
2024-07-13 15:17:28,056 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=30.7 pTM=0.259 ipTM=0.231 tol=17.7
2024-07-13 15:23:35,991 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=30.2 pTM=0.26 ipTM=0.232 tol=24.1
2024-07-13 15:29:44,044 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=30.6 pTM=0.26 ipTM=0.231 tol=22.8
2024-07-13 15:35:52,130 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=30.4 pTM=0.259 ipTM=0.231 tol=17.1
2024-07-13 15:42:00,219 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=30.7 pTM=0.26 ipTM=0.232 tol=15.1
2024-07-13 15:48:08,323 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=30.7 pTM=0.26 ipTM=0.231 tol=20.6
2024-07-13 15:54:16,308 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=30.8 pTM=0.26 ipTM=0.231 tol=18.6
2024-07-13 16:00:24,426 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=30.6 pTM=0.26 ipTM=0.234 tol=17
2024-07-13 16:00:24,429 alphafold2_multimer_v3_model_4_seed_000 took 11404.1s (30 recycles)
2024-07-13 16:06:35,545 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=30.5 pTM=0.27 ipTM=0.222
2024-07-13 16:12:43,192 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=30.5 pTM=0.259 ipTM=0.222 tol=25.2
2024-07-13 16:18:50,792 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=31 pTM=0.259 ipTM=0.226 tol=21.2
2024-07-13 16:24:58,582 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=30.5 pTM=0.26 ipTM=0.223 tol=23.9
2024-07-13 16:31:06,352 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=30.2 pTM=0.259 ipTM=0.22 tol=20.1
2024-07-13 16:37:14,146 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=30 pTM=0.26 ipTM=0.224 tol=23.7
2024-07-13 16:43:21,824 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=30.2 pTM=0.259 ipTM=0.22 tol=19.9
2024-07-13 16:49:29,569 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=29.9 pTM=0.259 ipTM=0.222 tol=18.4
2024-07-13 16:55:37,346 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=30 pTM=0.259 ipTM=0.223 tol=16
2024-07-13 17:01:45,099 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=29.9 pTM=0.259 ipTM=0.221 tol=22.1
2024-07-13 17:07:52,891 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=30.1 pTM=0.259 ipTM=0.219 tol=25.4
2024-07-13 17:14:00,705 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=29.9 pTM=0.26 ipTM=0.222 tol=17.9
2024-07-13 17:20:08,646 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=29.9 pTM=0.26 ipTM=0.223 tol=20.2
2024-07-13 17:26:16,452 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=30 pTM=0.261 ipTM=0.223 tol=18.9
2024-07-13 17:32:24,344 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=30.1 pTM=0.262 ipTM=0.225 tol=25.7
2024-07-13 17:38:32,203 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=29.9 pTM=0.261 ipTM=0.22 tol=23
2024-07-13 17:44:40,076 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=29.9 pTM=0.26 ipTM=0.221 tol=18.5
2024-07-13 17:50:47,971 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=30.1 pTM=0.262 ipTM=0.225 tol=18.9
2024-07-13 17:56:55,823 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=30.2 pTM=0.262 ipTM=0.225 tol=24.9
2024-07-13 18:03:03,616 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=30 pTM=0.26 ipTM=0.217 tol=22.8
2024-07-13 18:09:11,437 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=30.1 pTM=0.261 ipTM=0.222 tol=19.6
2024-07-13 18:15:19,266 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=30.3 pTM=0.262 ipTM=0.223 tol=23.4
2024-07-13 18:21:27,006 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=30.1 pTM=0.261 ipTM=0.221 tol=18.2
2024-07-13 18:27:34,773 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=30.2 pTM=0.263 ipTM=0.224 tol=17.1
2024-07-13 18:33:42,489 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=30.2 pTM=0.262 ipTM=0.223 tol=19.3
2024-07-13 18:39:50,250 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=30.2 pTM=0.261 ipTM=0.223 tol=14.1
2024-07-13 18:45:58,170 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=30.5 pTM=0.262 ipTM=0.225 tol=16
2024-07-13 18:52:06,056 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=30.1 pTM=0.262 ipTM=0.223 tol=24.1
2024-07-13 18:58:13,959 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=30.1 pTM=0.26 ipTM=0.227 tol=18.2
2024-07-13 19:04:21,793 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=30.3 pTM=0.262 ipTM=0.225 tol=23.4
2024-07-13 19:10:29,630 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=30.4 pTM=0.261 ipTM=0.224 tol=22.2
2024-07-13 19:10:29,634 alphafold2_multimer_v3_model_5_seed_000 took 11401.2s (30 recycles)
2024-07-13 19:10:33,560 reranking models by 'multimer' metric
2024-07-13 19:10:57,634 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-13 19:25:17,016 Relaxation took 883.5s
2024-07-13 19:25:17,017 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=29.9 pTM=0.263 ipTM=0.241
2024-07-13 19:42:46,512 Relaxation took 1049.5s
2024-07-13 19:42:46,512 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=30.6 pTM=0.26 ipTM=0.234
2024-07-13 19:56:52,081 Relaxation took 845.6s
2024-07-13 19:56:52,082 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=32 pTM=0.267 ipTM=0.226
2024-07-13 20:08:29,132 Relaxation took 697.0s
2024-07-13 20:08:29,132 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=33.5 pTM=0.26 ipTM=0.225
2024-07-13 20:35:33,443 Relaxation took 1624.3s
2024-07-13 20:35:33,443 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=30.4 pTM=0.261 ipTM=0.224
2024-07-13 20:35:51,715 Done