2024-07-13 03:55:07,018 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 03:55:07,346 Running on GPU
2024-07-13 03:55:21,733 Found 6 citations for tools or databases
2024-07-13 03:55:21,733 Query 1/1: SL9P1_LY6S (length 416)
2024-07-13 03:55:22,217 Sleeping for 5s. Reason: PENDING
2024-07-13 03:55:27,643 Sleeping for 9s. Reason: RUNNING
2024-07-13 03:55:37,084 Sleeping for 9s. Reason: RUNNING
2024-07-13 03:55:46,518 Sleeping for 7s. Reason: RUNNING
2024-07-13 03:55:53,940 Sleeping for 8s. Reason: RUNNING
2024-07-13 03:56:02,376 Sleeping for 7s. Reason: RUNNING
2024-07-13 03:56:11,157 Sleeping for 7s. Reason: PENDING
2024-07-13 03:56:18,563 Sleeping for 9s. Reason: RUNNING
2024-07-13 03:56:27,979 Sleeping for 10s. Reason: RUNNING
2024-07-13 03:56:39,693 Setting max_seq=508, max_extra_seq=2048
2024-07-13 03:59:41,151 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=62.1 pTM=0.542 ipTM=0.191
2024-07-13 03:59:45,145 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=61.4 pTM=0.515 ipTM=0.181 tol=3.25
2024-07-13 03:59:49,130 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=61.2 pTM=0.517 ipTM=0.181 tol=1.65
2024-07-13 03:59:53,125 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=62.4 pTM=0.519 ipTM=0.181 tol=0.737
2024-07-13 03:59:57,109 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=62.4 pTM=0.52 ipTM=0.178 tol=0.356
2024-07-13 03:59:57,110 alphafold2_multimer_v3_model_1_seed_000 took 133.8s (4 recycles)
2024-07-13 04:00:01,207 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=62.3 pTM=0.556 ipTM=0.232
2024-07-13 04:00:05,175 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=62.4 pTM=0.542 ipTM=0.205 tol=1.95
2024-07-13 04:00:09,136 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=61.5 pTM=0.527 ipTM=0.157 tol=3.4
2024-07-13 04:00:13,101 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=61.8 pTM=0.508 ipTM=0.126 tol=6.4
2024-07-13 04:00:17,063 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=63.1 pTM=0.52 ipTM=0.153 tol=4.76
2024-07-13 04:00:21,029 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=64.7 pTM=0.527 ipTM=0.168 tol=3.17
2024-07-13 04:00:24,997 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=66.2 pTM=0.68 ipTM=0.615 tol=4.34
2024-07-13 04:00:28,967 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=65.5 pTM=0.561 ipTM=0.22 tol=3.96
2024-07-13 04:00:32,957 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=65.4 pTM=0.546 ipTM=0.198 tol=1.19
2024-07-13 04:00:36,932 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=65.2 pTM=0.637 ipTM=0.505 tol=3.83
2024-07-13 04:00:40,917 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=65.1 pTM=0.554 ipTM=0.211 tol=5.02
2024-07-13 04:00:44,904 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=65 pTM=0.539 ipTM=0.193 tol=1.62
2024-07-13 04:00:48,890 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=65.2 pTM=0.645 ipTM=0.529 tol=3.77
2024-07-13 04:00:52,873 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=65.4 pTM=0.545 ipTM=0.203 tol=4.75
2024-07-13 04:00:56,853 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=64.2 pTM=0.545 ipTM=0.206 tol=1.43
2024-07-13 04:01:00,872 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=66 pTM=0.667 ipTM=0.584 tol=5.18
2024-07-13 04:01:04,839 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=65.2 pTM=0.573 ipTM=0.264 tol=3.72
2024-07-13 04:01:08,814 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=65.2 pTM=0.548 ipTM=0.197 tol=2.81
2024-07-13 04:01:12,784 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=65.1 pTM=0.679 ipTM=0.615 tol=3.67
2024-07-13 04:01:16,759 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=66.6 pTM=0.558 ipTM=0.221 tol=4.32
2024-07-13 04:01:20,728 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64.9 pTM=0.555 ipTM=0.215 tol=2.84
2024-07-13 04:01:24,697 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=66.8 pTM=0.676 ipTM=0.603 tol=4.43
2024-07-13 04:01:28,675 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62.8 pTM=0.615 ipTM=0.429 tol=4.59
2024-07-13 04:01:32,670 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=65.4 pTM=0.553 ipTM=0.218 tol=4.08
2024-07-13 04:01:36,643 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=65.2 pTM=0.679 ipTM=0.609 tol=4.14
2024-07-13 04:01:40,626 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=66.6 pTM=0.561 ipTM=0.223 tol=3.36
2024-07-13 04:01:44,611 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=66.1 pTM=0.558 ipTM=0.218 tol=1.18
2024-07-13 04:01:48,594 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=65.8 pTM=0.65 ipTM=0.538 tol=3.98
2024-07-13 04:01:52,580 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=63.4 pTM=0.601 ipTM=0.367 tol=5.85
2024-07-13 04:01:56,592 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=66.1 pTM=0.549 ipTM=0.199 tol=3.4
2024-07-13 04:02:00,588 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=66.7 pTM=0.675 ipTM=0.594 tol=3.63
2024-07-13 04:02:00,589 alphafold2_multimer_v3_model_2_seed_000 took 123.4s (30 recycles)
2024-07-13 04:02:04,705 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=60.9 pTM=0.552 ipTM=0.15
2024-07-13 04:02:08,684 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.9 pTM=0.695 ipTM=0.636 tol=9.96
2024-07-13 04:02:12,656 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=67.9 pTM=0.694 ipTM=0.614 tol=1.88
2024-07-13 04:02:16,632 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=65.9 pTM=0.669 ipTM=0.537 tol=2.22
2024-07-13 04:02:20,605 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66.1 pTM=0.58 ipTM=0.209 tol=5.38
2024-07-13 04:02:24,576 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=64.8 pTM=0.579 ipTM=0.202 tol=1.01
2024-07-13 04:02:28,558 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=65.6 pTM=0.646 ipTM=0.451 tol=3.19
2024-07-13 04:02:32,537 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=66.2 pTM=0.58 ipTM=0.201 tol=2.3
2024-07-13 04:02:36,514 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=65.2 pTM=0.646 ipTM=0.446 tol=2.88
2024-07-13 04:02:40,492 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=65.7 pTM=0.577 ipTM=0.193 tol=3.24
2024-07-13 04:02:44,479 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=64.2 pTM=0.578 ipTM=0.216 tol=2.57
2024-07-13 04:02:48,463 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=65.8 pTM=0.644 ipTM=0.439 tol=2.83
2024-07-13 04:02:52,449 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=65.7 pTM=0.574 ipTM=0.196 tol=3.04
2024-07-13 04:02:56,492 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=64.1 pTM=0.595 ipTM=0.267 tol=1.48
2024-07-13 04:03:00,480 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=65.4 pTM=0.626 ipTM=0.407 tol=3.67
2024-07-13 04:03:04,454 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=65.9 pTM=0.571 ipTM=0.184 tol=3.34
2024-07-13 04:03:08,419 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=65.7 pTM=0.651 ipTM=0.451 tol=2.9
2024-07-13 04:03:12,391 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=65.7 pTM=0.576 ipTM=0.196 tol=2.76
2024-07-13 04:03:16,355 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=64.7 pTM=0.571 ipTM=0.196 tol=2.67
2024-07-13 04:03:20,326 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=65.1 pTM=0.653 ipTM=0.484 tol=2.85
2024-07-13 04:03:24,299 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=64.8 pTM=0.577 ipTM=0.223 tol=5.2
2024-07-13 04:03:28,276 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=66.4 pTM=0.678 ipTM=0.567 tol=3.61
2024-07-13 04:03:32,259 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=65.1 pTM=0.586 ipTM=0.238 tol=3.52
2024-07-13 04:03:36,243 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=64.2 pTM=0.616 ipTM=0.337 tol=3.17
2024-07-13 04:03:40,226 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=64.9 pTM=0.58 ipTM=0.232 tol=2.18
2024-07-13 04:03:44,209 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=64.2 pTM=0.635 ipTM=0.421 tol=2.04
2024-07-13 04:03:48,196 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=64.9 pTM=0.569 ipTM=0.203 tol=2.43
2024-07-13 04:03:52,186 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=64.1 pTM=0.568 ipTM=0.199 tol=1.54
2024-07-13 04:03:56,186 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=66 pTM=0.665 ipTM=0.537 tol=4.25
2024-07-13 04:04:00,160 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=65.2 pTM=0.579 ipTM=0.232 tol=4.8
2024-07-13 04:04:04,130 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=63.9 pTM=0.565 ipTM=0.188 tol=1.32
2024-07-13 04:04:04,130 alphafold2_multimer_v3_model_3_seed_000 took 123.4s (30 recycles)
2024-07-13 04:04:08,238 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=61.6 pTM=0.538 ipTM=0.174
2024-07-13 04:04:12,228 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=69.2 pTM=0.71 ipTM=0.655 tol=11.8
2024-07-13 04:04:16,209 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.8 pTM=0.656 ipTM=0.52 tol=2.62
2024-07-13 04:04:20,201 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64.7 pTM=0.56 ipTM=0.195 tol=4.3
2024-07-13 04:04:24,245 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64.8 pTM=0.565 ipTM=0.246 tol=2.72
2024-07-13 04:04:28,237 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=65.1 pTM=0.597 ipTM=0.325 tol=1.75
2024-07-13 04:04:32,222 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=64.9 pTM=0.561 ipTM=0.227 tol=1.77
2024-07-13 04:04:36,210 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=67.2 pTM=0.674 ipTM=0.585 tol=4.55
2024-07-13 04:04:40,185 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64.2 pTM=0.637 ipTM=0.463 tol=4.21
2024-07-13 04:04:44,170 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=65.5 pTM=0.558 ipTM=0.201 tol=3.9
2024-07-13 04:04:48,145 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=65.8 pTM=0.654 ipTM=0.528 tol=4.34
2024-07-13 04:04:52,149 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=65.8 pTM=0.564 ipTM=0.219 tol=3.75
2024-07-13 04:04:56,142 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=65.2 pTM=0.624 ipTM=0.414 tol=1.78
2024-07-13 04:05:00,124 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=65.6 pTM=0.56 ipTM=0.215 tol=1.79
2024-07-13 04:05:04,106 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=65.2 pTM=0.559 ipTM=0.218 tol=2.35
2024-07-13 04:05:08,100 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=67.6 pTM=0.684 ipTM=0.606 tol=5.03
2024-07-13 04:05:12,090 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=66.9 pTM=0.67 ipTM=0.542 tol=3.36
2024-07-13 04:05:16,083 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=65.5 pTM=0.653 ipTM=0.513 tol=2.13
2024-07-13 04:05:20,083 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=64.1 pTM=0.601 ipTM=0.334 tol=4.57
2024-07-13 04:05:24,074 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=65.6 pTM=0.568 ipTM=0.231 tol=1.69
2024-07-13 04:05:28,051 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.9 pTM=0.572 ipTM=0.263 tol=1.8
2024-07-13 04:05:32,033 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=66 pTM=0.648 ipTM=0.527 tol=4
2024-07-13 04:05:36,006 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=65 pTM=0.57 ipTM=0.24 tol=4.46
2024-07-13 04:05:39,986 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=65.4 pTM=0.565 ipTM=0.251 tol=2.07
2024-07-13 04:05:43,963 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=66.4 pTM=0.67 ipTM=0.578 tol=4.52
2024-07-13 04:05:47,940 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=66 pTM=0.661 ipTM=0.527 tol=1.12
2024-07-13 04:05:51,947 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=65.1 pTM=0.643 ipTM=0.465 tol=1.13
2024-07-13 04:05:55,929 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=63.8 pTM=0.552 ipTM=0.205 tol=5.53
2024-07-13 04:05:59,903 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=63.4 pTM=0.556 ipTM=0.224 tol=1.5
2024-07-13 04:06:03,887 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=65.5 pTM=0.645 ipTM=0.492 tol=5.09
2024-07-13 04:06:07,865 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=64.8 pTM=0.553 ipTM=0.201 tol=4.14
2024-07-13 04:06:07,865 alphafold2_multimer_v3_model_4_seed_000 took 123.6s (30 recycles)
2024-07-13 04:06:11,970 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=58.8 pTM=0.53 ipTM=0.154
2024-07-13 04:06:15,950 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.1 pTM=0.693 ipTM=0.636 tol=10.8
2024-07-13 04:06:19,943 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65.2 pTM=0.662 ipTM=0.529 tol=1.6
2024-07-13 04:06:23,920 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=64.9 pTM=0.656 ipTM=0.5 tol=1.51
2024-07-13 04:06:27,897 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65.8 pTM=0.672 ipTM=0.538 tol=1.53
2024-07-13 04:06:31,869 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.9 pTM=0.669 ipTM=0.547 tol=1.16
2024-07-13 04:06:35,848 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=66.4 pTM=0.677 ipTM=0.568 tol=1.06
2024-07-13 04:06:39,825 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=66.6 pTM=0.68 ipTM=0.576 tol=0.632
2024-07-13 04:06:43,797 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=66.9 pTM=0.686 ipTM=0.598 tol=0.826
2024-07-13 04:06:47,796 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67.2 pTM=0.689 ipTM=0.599 tol=0.66
2024-07-13 04:06:51,782 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67.3 pTM=0.691 ipTM=0.603 tol=0.571
2024-07-13 04:06:55,751 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.5 pTM=0.694 ipTM=0.607 tol=0.548
2024-07-13 04:06:59,734 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.5 pTM=0.694 ipTM=0.606 tol=0.427
2024-07-13 04:06:59,735 alphafold2_multimer_v3_model_5_seed_000 took 51.7s (12 recycles)
2024-07-13 04:06:59,862 reranking models by 'multimer' metric
2024-07-13 04:07:03,249 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-13 04:07:32,211 Relaxation took 32.3s
2024-07-13 04:07:32,211 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67.5 pTM=0.694 ipTM=0.606
2024-07-13 04:07:58,381 Relaxation took 26.2s
2024-07-13 04:07:58,381 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=66.7 pTM=0.675 ipTM=0.594
2024-07-13 04:08:16,721 Relaxation took 18.3s
2024-07-13 04:08:16,721 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=64.8 pTM=0.553 ipTM=0.201
2024-07-13 04:08:32,281 Relaxation took 15.6s
2024-07-13 04:08:32,281 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=63.9 pTM=0.565 ipTM=0.188
2024-07-13 04:08:43,723 Relaxation took 11.4s
2024-07-13 04:08:43,724 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=62.4 pTM=0.52 ipTM=0.178
2024-07-13 04:08:50,553 Done