2024-07-13 04:07:07,496 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 04:07:07,820 Running on GPU
2024-07-13 04:07:19,224 Found 6 citations for tools or databases
2024-07-13 04:07:19,225 Query 1/1: SMCO2_COQ9 (length 661)
2024-07-13 04:07:19,646 Sleeping for 5s. Reason: PENDING
2024-07-13 04:07:25,046 Sleeping for 5s. Reason: RUNNING
2024-07-13 04:07:30,447 Sleeping for 8s. Reason: RUNNING
2024-07-13 04:07:38,872 Sleeping for 7s. Reason: RUNNING
2024-07-13 04:07:46,306 Sleeping for 7s. Reason: RUNNING
2024-07-13 04:07:53,746 Sleeping for 8s. Reason: RUNNING
2024-07-13 04:08:02,185 Sleeping for 5s. Reason: RUNNING
2024-07-13 04:08:07,605 Sleeping for 6s. Reason: RUNNING
2024-07-13 04:08:15,536 Sleeping for 9s. Reason: PENDING
2024-07-13 04:08:24,955 Sleeping for 6s. Reason: RUNNING
2024-07-13 04:08:31,360 Sleeping for 8s. Reason: RUNNING
2024-07-13 04:08:39,787 Sleeping for 6s. Reason: RUNNING
2024-07-13 04:08:47,587 Setting max_seq=508, max_extra_seq=1776
2024-07-13 04:13:04,652 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=43.8 pTM=0.411 ipTM=0.207
2024-07-13 04:13:13,426 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=44.5 pTM=0.421 ipTM=0.226 tol=9.38
2024-07-13 04:13:22,212 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=46 pTM=0.415 ipTM=0.215 tol=8.35
2024-07-13 04:13:31,008 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=46.5 pTM=0.414 ipTM=0.214 tol=4.95
2024-07-13 04:13:39,825 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=46.7 pTM=0.415 ipTM=0.216 tol=4.92
2024-07-13 04:13:48,642 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=46.1 pTM=0.411 ipTM=0.211 tol=4.27
2024-07-13 04:13:57,483 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=45.3 pTM=0.405 ipTM=0.2 tol=7.7
2024-07-13 04:14:06,332 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=46.8 pTM=0.405 ipTM=0.198 tol=8.09
2024-07-13 04:14:15,193 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=46.6 pTM=0.402 ipTM=0.19 tol=8.51
2024-07-13 04:14:24,057 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=44.9 pTM=0.396 ipTM=0.182 tol=6.93
2024-07-13 04:14:32,929 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=47.6 pTM=0.396 ipTM=0.184 tol=6.7
2024-07-13 04:14:41,774 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=47.2 pTM=0.406 ipTM=0.203 tol=6.22
2024-07-13 04:14:50,647 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=46.3 pTM=0.402 ipTM=0.196 tol=4.78
2024-07-13 04:14:59,530 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=45.8 pTM=0.408 ipTM=0.206 tol=5.05
2024-07-13 04:15:08,420 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=45.9 pTM=0.411 ipTM=0.212 tol=6.27
2024-07-13 04:15:17,304 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=46.6 pTM=0.406 ipTM=0.203 tol=6.08
2024-07-13 04:15:26,193 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=45.5 pTM=0.402 ipTM=0.197 tol=8.57
2024-07-13 04:15:35,103 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=46.4 pTM=0.405 ipTM=0.202 tol=6.75
2024-07-13 04:15:43,996 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=45.3 pTM=0.403 ipTM=0.197 tol=3.13
2024-07-13 04:15:52,887 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=45.3 pTM=0.407 ipTM=0.203 tol=4.32
2024-07-13 04:16:01,760 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=47.2 pTM=0.429 ipTM=0.245 tol=5.1
2024-07-13 04:16:10,640 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=46.7 pTM=0.411 ipTM=0.211 tol=5.7
2024-07-13 04:16:19,537 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=45.4 pTM=0.408 ipTM=0.202 tol=7.21
2024-07-13 04:16:28,439 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=47.2 pTM=0.407 ipTM=0.206 tol=7.1
2024-07-13 04:16:37,352 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=46.6 pTM=0.41 ipTM=0.205 tol=3.4
2024-07-13 04:16:46,260 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=45.7 pTM=0.4 ipTM=0.189 tol=7.35
2024-07-13 04:16:55,151 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=46.2 pTM=0.403 ipTM=0.198 tol=6.87
2024-07-13 04:17:04,028 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=46.1 pTM=0.404 ipTM=0.198 tol=6.64
2024-07-13 04:17:12,926 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=45.2 pTM=0.401 ipTM=0.193 tol=7.86
2024-07-13 04:17:21,822 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=46.3 pTM=0.404 ipTM=0.199 tol=6.93
2024-07-13 04:17:30,742 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=45.8 pTM=0.407 ipTM=0.205 tol=4.35
2024-07-13 04:17:30,742 alphafold2_multimer_v3_model_1_seed_000 took 449.4s (30 recycles)
2024-07-13 04:17:39,982 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=43.2 pTM=0.381 ipTM=0.168
2024-07-13 04:17:48,906 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=45.6 pTM=0.393 ipTM=0.163 tol=19.5
2024-07-13 04:17:57,831 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=44.7 pTM=0.393 ipTM=0.164 tol=16.3
2024-07-13 04:18:06,752 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=45.7 pTM=0.392 ipTM=0.165 tol=8.3
2024-07-13 04:18:15,672 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=45.8 pTM=0.394 ipTM=0.177 tol=7.21
2024-07-13 04:18:24,580 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=45.7 pTM=0.399 ipTM=0.177 tol=5.39
2024-07-13 04:18:33,483 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=45.9 pTM=0.407 ipTM=0.221 tol=3.11
2024-07-13 04:18:42,396 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=45.8 pTM=0.405 ipTM=0.192 tol=5.62
2024-07-13 04:18:51,310 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=46.3 pTM=0.413 ipTM=0.246 tol=4.31
2024-07-13 04:19:00,222 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=46.2 pTM=0.407 ipTM=0.198 tol=2.25
2024-07-13 04:19:09,125 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=46.6 pTM=0.418 ipTM=0.264 tol=2.45
2024-07-13 04:19:18,034 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=46.1 pTM=0.406 ipTM=0.2 tol=2.66
2024-07-13 04:19:26,932 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=46 pTM=0.412 ipTM=0.23 tol=2.65
2024-07-13 04:19:35,831 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=46 pTM=0.407 ipTM=0.2 tol=2.9
2024-07-13 04:19:44,725 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=46.1 pTM=0.416 ipTM=0.252 tol=2.94
2024-07-13 04:19:53,623 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=45.9 pTM=0.406 ipTM=0.198 tol=4.78
2024-07-13 04:20:02,513 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=46.2 pTM=0.421 ipTM=0.276 tol=4.93
2024-07-13 04:20:11,402 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=46 pTM=0.41 ipTM=0.205 tol=5.08
2024-07-13 04:20:20,291 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=45.9 pTM=0.416 ipTM=0.216 tol=2.21
2024-07-13 04:20:29,188 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=45.8 pTM=0.419 ipTM=0.222 tol=2.36
2024-07-13 04:20:38,079 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=46.2 pTM=0.431 ipTM=0.276 tol=3.81
2024-07-13 04:20:46,993 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=48.9 pTM=0.412 ipTM=0.211 tol=7.49
2024-07-13 04:20:55,892 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=46 pTM=0.402 ipTM=0.195 tol=5.04
2024-07-13 04:21:04,788 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=46.8 pTM=0.394 ipTM=0.18 tol=5.62
2024-07-13 04:21:13,687 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=48.4 pTM=0.394 ipTM=0.171 tol=7.46
2024-07-13 04:21:22,600 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=51.4 pTM=0.385 ipTM=0.342 tol=9.99
2024-07-13 04:21:31,483 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=50.8 pTM=0.393 ipTM=0.296 tol=10.6
2024-07-13 04:21:40,393 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=49.4 pTM=0.384 ipTM=0.262 tol=5.25
2024-07-13 04:21:49,277 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=49.4 pTM=0.385 ipTM=0.265 tol=3.01
2024-07-13 04:21:58,160 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=48.3 pTM=0.385 ipTM=0.233 tol=3.31
2024-07-13 04:22:07,047 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=48.2 pTM=0.381 ipTM=0.243 tol=3.56
2024-07-13 04:22:07,047 alphafold2_multimer_v3_model_2_seed_000 took 276.0s (30 recycles)
2024-07-13 04:22:16,239 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=42.5 pTM=0.398 ipTM=0.191
2024-07-13 04:22:25,133 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=47.4 pTM=0.421 ipTM=0.229 tol=9.24
2024-07-13 04:22:34,018 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=48.3 pTM=0.434 ipTM=0.311 tol=9.3
2024-07-13 04:22:42,899 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=47.2 pTM=0.439 ipTM=0.26 tol=5.29
2024-07-13 04:22:51,772 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=48.4 pTM=0.432 ipTM=0.273 tol=4.08
2024-07-13 04:23:00,643 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=47.5 pTM=0.426 ipTM=0.239 tol=3.04
2024-07-13 04:23:09,523 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=47 pTM=0.416 ipTM=0.217 tol=1.95
2024-07-13 04:23:18,407 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=47.2 pTM=0.427 ipTM=0.238 tol=1.42
2024-07-13 04:23:27,292 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=47.1 pTM=0.414 ipTM=0.214 tol=1.92
2024-07-13 04:23:36,172 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=47.4 pTM=0.434 ipTM=0.258 tol=1.88
2024-07-13 04:23:45,059 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=46.6 pTM=0.412 ipTM=0.212 tol=2.77
2024-07-13 04:23:53,944 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=46.4 pTM=0.42 ipTM=0.229 tol=2.58
2024-07-13 04:24:02,832 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=46.7 pTM=0.409 ipTM=0.205 tol=2.3
2024-07-13 04:24:11,717 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=46.5 pTM=0.421 ipTM=0.232 tol=2.67
2024-07-13 04:24:20,610 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=46.4 pTM=0.409 ipTM=0.204 tol=2.9
2024-07-13 04:24:29,502 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=46.1 pTM=0.417 ipTM=0.226 tol=2.36
2024-07-13 04:24:38,392 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=46.5 pTM=0.402 ipTM=0.194 tol=2.56
2024-07-13 04:24:47,283 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=45.9 pTM=0.412 ipTM=0.214 tol=2.75
2024-07-13 04:24:56,178 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=46.3 pTM=0.401 ipTM=0.193 tol=2.48
2024-07-13 04:25:05,069 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=45.6 pTM=0.41 ipTM=0.213 tol=2.46
2024-07-13 04:25:13,961 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=45.6 pTM=0.4 ipTM=0.192 tol=2.42
2024-07-13 04:25:22,853 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=46.2 pTM=0.407 ipTM=0.206 tol=2.97
2024-07-13 04:25:31,763 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=46.3 pTM=0.405 ipTM=0.199 tol=2.95
2024-07-13 04:25:40,661 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=46.1 pTM=0.408 ipTM=0.207 tol=2.62
2024-07-13 04:25:49,559 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=46.3 pTM=0.407 ipTM=0.203 tol=2.75
2024-07-13 04:25:58,454 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=46.2 pTM=0.407 ipTM=0.205 tol=2.51
2024-07-13 04:26:07,350 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=46.2 pTM=0.405 ipTM=0.198 tol=2.07
2024-07-13 04:26:16,246 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=46.3 pTM=0.411 ipTM=0.209 tol=1.65
2024-07-13 04:26:25,141 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=45.8 pTM=0.403 ipTM=0.196 tol=2.02
2024-07-13 04:26:34,041 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=46 pTM=0.408 ipTM=0.205 tol=1.97
2024-07-13 04:26:42,937 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=46 pTM=0.403 ipTM=0.196 tol=2.32
2024-07-13 04:26:42,938 alphafold2_multimer_v3_model_3_seed_000 took 275.6s (30 recycles)
2024-07-13 04:26:52,172 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=43.5 pTM=0.411 ipTM=0.258
2024-07-13 04:27:01,120 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=44 pTM=0.406 ipTM=0.198 tol=13.5
2024-07-13 04:27:10,056 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=44.2 pTM=0.41 ipTM=0.201 tol=5.84
2024-07-13 04:27:18,995 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=42.9 pTM=0.434 ipTM=0.385 tol=14.3
2024-07-13 04:27:27,941 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=44.1 pTM=0.416 ipTM=0.226 tol=13.6
2024-07-13 04:27:36,883 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=44.2 pTM=0.409 ipTM=0.2 tol=6.38
2024-07-13 04:27:45,828 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=43.7 pTM=0.409 ipTM=0.201 tol=7.85
2024-07-13 04:27:54,766 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=43.4 pTM=0.42 ipTM=0.296 tol=12.9
2024-07-13 04:28:03,713 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=44.2 pTM=0.405 ipTM=0.191 tol=7.16
2024-07-13 04:28:12,653 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=43.8 pTM=0.416 ipTM=0.287 tol=8.3
2024-07-13 04:28:21,599 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=43.1 pTM=0.419 ipTM=0.227 tol=10.8
2024-07-13 04:28:30,549 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=43.5 pTM=0.402 ipTM=0.19 tol=10.5
2024-07-13 04:28:39,493 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=44.9 pTM=0.413 ipTM=0.206 tol=8.32
2024-07-13 04:28:48,426 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=44.1 pTM=0.417 ipTM=0.32 tol=5.24
2024-07-13 04:28:57,360 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=43.7 pTM=0.45 ipTM=0.317 tol=7.95
2024-07-13 04:29:06,291 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=44.9 pTM=0.423 ipTM=0.252 tol=9.93
2024-07-13 04:29:15,226 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=44.4 pTM=0.417 ipTM=0.248 tol=8.38
2024-07-13 04:29:24,175 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=43 pTM=0.437 ipTM=0.35 tol=10.6
2024-07-13 04:29:33,116 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=43.9 pTM=0.422 ipTM=0.288 tol=9.18
2024-07-13 04:29:42,063 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=45.4 pTM=0.43 ipTM=0.271 tol=8.17
2024-07-13 04:29:51,006 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=44.1 pTM=0.407 ipTM=0.199 tol=6.76
2024-07-13 04:29:59,945 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=44.4 pTM=0.415 ipTM=0.277 tol=13.7
2024-07-13 04:30:08,881 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=44.7 pTM=0.406 ipTM=0.189 tol=7.31
2024-07-13 04:30:17,817 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=44.2 pTM=0.418 ipTM=0.245 tol=11.7
2024-07-13 04:30:26,752 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=44 pTM=0.405 ipTM=0.196 tol=7.95
2024-07-13 04:30:35,684 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=44.9 pTM=0.405 ipTM=0.191 tol=6.23
2024-07-13 04:30:44,613 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=45 pTM=0.455 ipTM=0.345 tol=8.46
2024-07-13 04:30:53,552 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=44.8 pTM=0.406 ipTM=0.192 tol=10.3
2024-07-13 04:31:02,498 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=44.5 pTM=0.408 ipTM=0.195 tol=9.32
2024-07-13 04:31:11,451 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=44.1 pTM=0.454 ipTM=0.389 tol=6.71
2024-07-13 04:31:20,383 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=44 pTM=0.413 ipTM=0.211 tol=10.4
2024-07-13 04:31:20,384 alphafold2_multimer_v3_model_4_seed_000 took 277.2s (30 recycles)
2024-07-13 04:31:29,595 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=41.8 pTM=0.398 ipTM=0.18
2024-07-13 04:31:38,517 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=43.1 pTM=0.408 ipTM=0.202 tol=8.05
2024-07-13 04:31:47,445 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=43.1 pTM=0.406 ipTM=0.191 tol=7.67
2024-07-13 04:31:56,379 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=42.6 pTM=0.4 ipTM=0.2 tol=7.74
2024-07-13 04:32:05,331 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=42.9 pTM=0.402 ipTM=0.183 tol=7.05
2024-07-13 04:32:14,285 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=44.7 pTM=0.396 ipTM=0.173 tol=5.64
2024-07-13 04:32:23,219 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=43.4 pTM=0.406 ipTM=0.196 tol=4.15
2024-07-13 04:32:32,139 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=44.1 pTM=0.417 ipTM=0.22 tol=5.46
2024-07-13 04:32:41,061 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=43 pTM=0.399 ipTM=0.181 tol=3.61
2024-07-13 04:32:49,981 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=44.4 pTM=0.411 ipTM=0.203 tol=5.78
2024-07-13 04:32:58,896 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=43.5 pTM=0.416 ipTM=0.212 tol=4.61
2024-07-13 04:33:07,815 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=43.7 pTM=0.41 ipTM=0.202 tol=5.43
2024-07-13 04:33:16,741 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=42.9 pTM=0.405 ipTM=0.191 tol=2.85
2024-07-13 04:33:25,668 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=42.8 pTM=0.411 ipTM=0.285 tol=4.82
2024-07-13 04:33:34,590 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=42.8 pTM=0.407 ipTM=0.198 tol=3.89
2024-07-13 04:33:43,505 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=45.2 pTM=0.432 ipTM=0.292 tol=5.28
2024-07-13 04:33:52,439 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=44 pTM=0.411 ipTM=0.219 tol=7.61
2024-07-13 04:34:01,362 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=43.3 pTM=0.409 ipTM=0.208 tol=7.17
2024-07-13 04:34:10,282 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=43 pTM=0.418 ipTM=0.22 tol=2.08
2024-07-13 04:34:19,200 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=43.2 pTM=0.405 ipTM=0.197 tol=3.19
2024-07-13 04:34:28,118 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=42.7 pTM=0.411 ipTM=0.208 tol=2.24
2024-07-13 04:34:37,035 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=43.9 pTM=0.41 ipTM=0.207 tol=5.15
2024-07-13 04:34:45,959 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=43.9 pTM=0.417 ipTM=0.219 tol=4.2
2024-07-13 04:34:54,868 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=45.9 pTM=0.414 ipTM=0.21 tol=5.71
2024-07-13 04:35:03,807 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=45.1 pTM=0.407 ipTM=0.203 tol=3.51
2024-07-13 04:35:12,728 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=43.7 pTM=0.409 ipTM=0.202 tol=3.47
2024-07-13 04:35:21,657 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=43.4 pTM=0.405 ipTM=0.194 tol=2.89
2024-07-13 04:35:30,583 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=45.1 pTM=0.422 ipTM=0.24 tol=5.78
2024-07-13 04:35:39,504 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=44.4 pTM=0.422 ipTM=0.23 tol=4.7
2024-07-13 04:35:48,429 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=44 pTM=0.411 ipTM=0.207 tol=4.65
2024-07-13 04:35:57,353 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=43.1 pTM=0.406 ipTM=0.196 tol=3.14
2024-07-13 04:35:57,354 alphafold2_multimer_v3_model_5_seed_000 took 276.7s (30 recycles)
2024-07-13 04:35:57,636 reranking models by 'multimer' metric
2024-07-13 04:35:58,930 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-13 04:36:56,464 Relaxation took 58.8s
2024-07-13 04:36:56,464 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=48.2 pTM=0.381 ipTM=0.243
2024-07-13 04:38:00,954 Relaxation took 64.5s
2024-07-13 04:38:00,954 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=44 pTM=0.413 ipTM=0.211
2024-07-13 04:38:46,432 Relaxation took 45.5s
2024-07-13 04:38:46,433 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=45.8 pTM=0.407 ipTM=0.205
2024-07-13 04:39:30,107 Relaxation took 43.7s
2024-07-13 04:39:30,107 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=43.1 pTM=0.406 ipTM=0.196
2024-07-13 04:40:08,771 Relaxation took 38.7s
2024-07-13 04:40:08,771 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=46 pTM=0.403 ipTM=0.196
2024-07-13 04:40:13,345 Done