2024-07-13 04:10:21,863 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 04:10:22,198 Running on GPU
2024-07-13 04:10:42,065 Found 6 citations for tools or databases
2024-07-13 04:10:42,065 Query 1/1: SMD1_SMOC2 (length 565)
2024-07-13 04:10:42,522 Sleeping for 10s. Reason: PENDING
2024-07-13 04:10:52,933 Sleeping for 8s. Reason: RUNNING
2024-07-13 04:11:01,366 Sleeping for 8s. Reason: RUNNING
2024-07-13 04:11:09,784 Sleeping for 10s. Reason: RUNNING
2024-07-13 04:11:20,225 Sleeping for 7s. Reason: RUNNING
2024-07-13 04:11:27,655 Sleeping for 7s. Reason: RUNNING
2024-07-13 04:11:36,672 Sleeping for 5s. Reason: PENDING
2024-07-13 04:11:42,101 Sleeping for 9s. Reason: RUNNING
2024-07-13 04:11:51,533 Sleeping for 9s. Reason: RUNNING
2024-07-13 04:12:00,948 Sleeping for 6s. Reason: RUNNING
2024-07-13 04:12:07,388 Sleeping for 9s. Reason: RUNNING
2024-07-13 04:12:16,805 Sleeping for 7s. Reason: RUNNING
2024-07-13 04:12:26,306 Setting max_seq=508, max_extra_seq=2048
2024-07-13 04:16:37,203 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=56.5 pTM=0.291 ipTM=0.364
2024-07-13 04:16:43,843 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=57.5 pTM=0.314 ipTM=0.298 tol=9.97
2024-07-13 04:16:50,497 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=58.1 pTM=0.312 ipTM=0.203 tol=8.85
2024-07-13 04:16:57,150 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=57.9 pTM=0.312 ipTM=0.19 tol=6.94
2024-07-13 04:17:03,813 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=57.9 pTM=0.316 ipTM=0.174 tol=2.79
2024-07-13 04:17:10,475 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=58.2 pTM=0.313 ipTM=0.196 tol=2.76
2024-07-13 04:17:17,146 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=58.3 pTM=0.313 ipTM=0.205 tol=1.74
2024-07-13 04:17:23,820 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=58.5 pTM=0.312 ipTM=0.202 tol=1.41
2024-07-13 04:17:30,506 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=58.4 pTM=0.312 ipTM=0.198 tol=2.01
2024-07-13 04:17:37,190 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=59.1 pTM=0.307 ipTM=0.197 tol=1.93
2024-07-13 04:17:43,875 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=58.7 pTM=0.308 ipTM=0.189 tol=1.65
2024-07-13 04:17:50,560 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=58.9 pTM=0.307 ipTM=0.217 tol=1.78
2024-07-13 04:17:57,252 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=58.8 pTM=0.308 ipTM=0.192 tol=0.883
2024-07-13 04:18:03,946 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=59.3 pTM=0.309 ipTM=0.24 tol=1.72
2024-07-13 04:18:10,643 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=59 pTM=0.31 ipTM=0.203 tol=1.5
2024-07-13 04:18:17,339 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=59.2 pTM=0.312 ipTM=0.271 tol=1.68
2024-07-13 04:18:24,042 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=59.1 pTM=0.311 ipTM=0.209 tol=1.27
2024-07-13 04:18:30,746 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=59.1 pTM=0.307 ipTM=0.252 tol=1.59
2024-07-13 04:18:37,454 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=58.7 pTM=0.308 ipTM=0.195 tol=0.984
2024-07-13 04:18:44,161 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=59.3 pTM=0.308 ipTM=0.261 tol=1.87
2024-07-13 04:18:50,869 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=59.1 pTM=0.308 ipTM=0.184 tol=1.05
2024-07-13 04:18:57,582 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=59.5 pTM=0.303 ipTM=0.245 tol=1.99
2024-07-13 04:19:04,300 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=59.2 pTM=0.303 ipTM=0.207 tol=1.92
2024-07-13 04:19:11,017 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=59.3 pTM=0.304 ipTM=0.229 tol=1.85
2024-07-13 04:19:17,734 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=58.8 pTM=0.307 ipTM=0.187 tol=1.66
2024-07-13 04:19:24,450 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=59.7 pTM=0.306 ipTM=0.261 tol=1.13
2024-07-13 04:19:31,171 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=59.3 pTM=0.306 ipTM=0.204 tol=1.92
2024-07-13 04:19:37,885 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=59.3 pTM=0.305 ipTM=0.235 tol=1.7
2024-07-13 04:19:44,603 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=59.1 pTM=0.306 ipTM=0.205 tol=2.28
2024-07-13 04:19:51,321 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=59.5 pTM=0.304 ipTM=0.26 tol=1.17
2024-07-13 04:19:58,044 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=59.1 pTM=0.303 ipTM=0.194 tol=1.19
2024-07-13 04:19:58,044 alphafold2_multimer_v3_model_1_seed_000 took 387.1s (30 recycles)
2024-07-13 04:20:04,992 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=58.7 pTM=0.311 ipTM=0.475
2024-07-13 04:20:11,738 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=58.8 pTM=0.306 ipTM=0.237 tol=8.34
2024-07-13 04:20:18,489 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=60.1 pTM=0.304 ipTM=0.239 tol=5.86
2024-07-13 04:20:25,231 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=60.3 pTM=0.304 ipTM=0.225 tol=3.49
2024-07-13 04:20:31,969 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=60.5 pTM=0.305 ipTM=0.231 tol=2.38
2024-07-13 04:20:38,715 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=60.8 pTM=0.306 ipTM=0.217 tol=1.98
2024-07-13 04:20:45,458 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=60.7 pTM=0.305 ipTM=0.212 tol=1.14
2024-07-13 04:20:52,201 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=60.7 pTM=0.304 ipTM=0.209 tol=1.27
2024-07-13 04:20:58,942 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=60.8 pTM=0.303 ipTM=0.224 tol=1.43
2024-07-13 04:21:05,679 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=59.6 pTM=0.304 ipTM=0.2 tol=4.64
2024-07-13 04:21:12,418 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=61 pTM=0.302 ipTM=0.235 tol=7.86
2024-07-13 04:21:19,164 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=61 pTM=0.3 ipTM=0.189 tol=3.58
2024-07-13 04:21:25,917 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=61.5 pTM=0.303 ipTM=0.296 tol=2.04
2024-07-13 04:21:32,668 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=61.3 pTM=0.303 ipTM=0.215 tol=1.69
2024-07-13 04:21:39,412 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=61.7 pTM=0.302 ipTM=0.275 tol=1.18
2024-07-13 04:21:46,160 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=61.4 pTM=0.302 ipTM=0.249 tol=1.23
2024-07-13 04:21:52,913 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=61.5 pTM=0.303 ipTM=0.264 tol=1.42
2024-07-13 04:21:59,663 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=61.3 pTM=0.302 ipTM=0.256 tol=0.66
2024-07-13 04:22:06,414 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=61.7 pTM=0.301 ipTM=0.26 tol=2.06
2024-07-13 04:22:13,167 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=61.9 pTM=0.302 ipTM=0.275 tol=1.83
2024-07-13 04:22:19,911 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62 pTM=0.302 ipTM=0.237 tol=1.01
2024-07-13 04:22:26,659 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=61.9 pTM=0.302 ipTM=0.251 tol=0.653
2024-07-13 04:22:33,405 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62.2 pTM=0.303 ipTM=0.266 tol=0.578
2024-07-13 04:22:40,152 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=61.7 pTM=0.302 ipTM=0.248 tol=0.64
2024-07-13 04:22:46,900 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=61.5 pTM=0.302 ipTM=0.25 tol=0.927
2024-07-13 04:22:53,652 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=61.9 pTM=0.303 ipTM=0.246 tol=0.812
2024-07-13 04:23:00,392 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=61.8 pTM=0.302 ipTM=0.231 tol=0.975
2024-07-13 04:23:07,135 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.1 pTM=0.303 ipTM=0.261 tol=1.81
2024-07-13 04:23:13,877 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=61.7 pTM=0.302 ipTM=0.23 tol=1.35
2024-07-13 04:23:20,625 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=61.6 pTM=0.304 ipTM=0.268 tol=1.06
2024-07-13 04:23:27,368 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=61.4 pTM=0.303 ipTM=0.225 tol=1.08
2024-07-13 04:23:27,368 alphafold2_multimer_v3_model_2_seed_000 took 209.1s (30 recycles)
2024-07-13 04:23:34,312 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=55.8 pTM=0.295 ipTM=0.441
2024-07-13 04:23:41,034 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=56.9 pTM=0.336 ipTM=0.249 tol=10.2
2024-07-13 04:23:47,770 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=57.2 pTM=0.311 ipTM=0.203 tol=6.44
2024-07-13 04:23:54,504 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=56.9 pTM=0.309 ipTM=0.212 tol=6.93
2024-07-13 04:24:01,239 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=57.1 pTM=0.319 ipTM=0.205 tol=5.51
2024-07-13 04:24:07,967 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=57.5 pTM=0.315 ipTM=0.215 tol=3.72
2024-07-13 04:24:14,695 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=57.1 pTM=0.315 ipTM=0.216 tol=5.12
2024-07-13 04:24:21,418 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=57.5 pTM=0.319 ipTM=0.225 tol=2.69
2024-07-13 04:24:28,145 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=57.6 pTM=0.319 ipTM=0.223 tol=2.23
2024-07-13 04:24:34,865 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=57.7 pTM=0.32 ipTM=0.215 tol=1.82
2024-07-13 04:24:41,592 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=57.8 pTM=0.32 ipTM=0.233 tol=2.12
2024-07-13 04:24:48,312 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=57.7 pTM=0.32 ipTM=0.222 tol=4.02
2024-07-13 04:24:55,033 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=57.9 pTM=0.323 ipTM=0.231 tol=2.21
2024-07-13 04:25:01,748 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=57.8 pTM=0.319 ipTM=0.219 tol=3.06
2024-07-13 04:25:08,472 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=58.3 pTM=0.324 ipTM=0.229 tol=1.69
2024-07-13 04:25:15,188 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=57.8 pTM=0.324 ipTM=0.217 tol=2.15
2024-07-13 04:25:21,915 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=58 pTM=0.324 ipTM=0.22 tol=2.31
2024-07-13 04:25:28,629 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=58 pTM=0.323 ipTM=0.219 tol=1.49
2024-07-13 04:25:35,352 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=57.9 pTM=0.32 ipTM=0.209 tol=2.35
2024-07-13 04:25:42,067 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=57.7 pTM=0.326 ipTM=0.215 tol=1.22
2024-07-13 04:25:48,786 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=58.2 pTM=0.324 ipTM=0.204 tol=1.67
2024-07-13 04:25:55,500 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=58.1 pTM=0.325 ipTM=0.225 tol=2.49
2024-07-13 04:26:02,220 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=58.1 pTM=0.323 ipTM=0.204 tol=1.63
2024-07-13 04:26:08,937 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=57.6 pTM=0.321 ipTM=0.212 tol=2.08
2024-07-13 04:26:15,655 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=57.8 pTM=0.326 ipTM=0.212 tol=1.94
2024-07-13 04:26:22,375 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=58.1 pTM=0.326 ipTM=0.222 tol=2.26
2024-07-13 04:26:29,093 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=57.9 pTM=0.329 ipTM=0.212 tol=2.04
2024-07-13 04:26:35,808 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=57.8 pTM=0.327 ipTM=0.225 tol=1.95
2024-07-13 04:26:42,529 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=57.6 pTM=0.321 ipTM=0.203 tol=1.68
2024-07-13 04:26:49,245 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=57.7 pTM=0.325 ipTM=0.231 tol=1.44
2024-07-13 04:26:55,964 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=58.1 pTM=0.328 ipTM=0.223 tol=2.66
2024-07-13 04:26:55,964 alphafold2_multimer_v3_model_3_seed_000 took 208.4s (30 recycles)
2024-07-13 04:27:02,901 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=55.8 pTM=0.303 ipTM=0.296
2024-07-13 04:27:09,636 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=55.9 pTM=0.313 ipTM=0.202 tol=9.29
2024-07-13 04:27:16,369 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=57.2 pTM=0.312 ipTM=0.247 tol=7.09
2024-07-13 04:27:23,097 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=56.8 pTM=0.317 ipTM=0.187 tol=4.87
2024-07-13 04:27:29,833 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=56.3 pTM=0.313 ipTM=0.182 tol=4.42
2024-07-13 04:27:36,572 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=57.9 pTM=0.311 ipTM=0.302 tol=3.6
2024-07-13 04:27:43,303 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=57.4 pTM=0.309 ipTM=0.258 tol=3.04
2024-07-13 04:27:50,041 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=57.1 pTM=0.312 ipTM=0.222 tol=2.97
2024-07-13 04:27:56,777 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=58 pTM=0.308 ipTM=0.35 tol=2.81
2024-07-13 04:28:03,514 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=57.3 pTM=0.311 ipTM=0.181 tol=3.6
2024-07-13 04:28:10,251 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=57.4 pTM=0.309 ipTM=0.209 tol=3.26
2024-07-13 04:28:16,991 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=58.2 pTM=0.308 ipTM=0.308 tol=2.5
2024-07-13 04:28:23,733 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=57.9 pTM=0.306 ipTM=0.296 tol=2.91
2024-07-13 04:28:30,475 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=57.4 pTM=0.305 ipTM=0.183 tol=4.88
2024-07-13 04:28:37,214 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=58.1 pTM=0.305 ipTM=0.337 tol=3.14
2024-07-13 04:28:43,947 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=57.7 pTM=0.308 ipTM=0.211 tol=2.01
2024-07-13 04:28:50,686 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=57.8 pTM=0.305 ipTM=0.219 tol=2.89
2024-07-13 04:28:57,427 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=58.3 pTM=0.304 ipTM=0.352 tol=2.99
2024-07-13 04:29:04,163 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=57.9 pTM=0.303 ipTM=0.301 tol=2.29
2024-07-13 04:29:10,904 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=57.8 pTM=0.303 ipTM=0.243 tol=2.78
2024-07-13 04:29:17,644 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=58 pTM=0.305 ipTM=0.208 tol=2.37
2024-07-13 04:29:24,389 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=58.3 pTM=0.303 ipTM=0.28 tol=2.35
2024-07-13 04:29:31,131 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=58.2 pTM=0.303 ipTM=0.293 tol=2.29
2024-07-13 04:29:37,871 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=57.3 pTM=0.307 ipTM=0.181 tol=4.19
2024-07-13 04:29:44,609 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=58.7 pTM=0.304 ipTM=0.407 tol=3.44
2024-07-13 04:29:51,349 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=57.9 pTM=0.306 ipTM=0.213 tol=2.77
2024-07-13 04:29:58,088 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=57.8 pTM=0.305 ipTM=0.211 tol=3.02
2024-07-13 04:30:04,832 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=57.9 pTM=0.304 ipTM=0.262 tol=2.89
2024-07-13 04:30:11,572 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=58.3 pTM=0.302 ipTM=0.328 tol=2.53
2024-07-13 04:30:18,316 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=57.2 pTM=0.307 ipTM=0.199 tol=3.22
2024-07-13 04:30:25,056 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=57.3 pTM=0.307 ipTM=0.187 tol=2.68
2024-07-13 04:30:25,057 alphafold2_multimer_v3_model_4_seed_000 took 208.9s (30 recycles)
2024-07-13 04:30:32,020 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=57.2 pTM=0.3 ipTM=0.211
2024-07-13 04:30:38,770 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=58.8 pTM=0.296 ipTM=0.262 tol=9.92
2024-07-13 04:30:45,518 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=59 pTM=0.3 ipTM=0.332 tol=4.8
2024-07-13 04:30:52,267 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=58.8 pTM=0.299 ipTM=0.347 tol=4.75
2024-07-13 04:30:59,016 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=58.2 pTM=0.299 ipTM=0.204 tol=4.36
2024-07-13 04:31:05,761 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=59.1 pTM=0.298 ipTM=0.349 tol=2.58
2024-07-13 04:31:12,510 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=58.2 pTM=0.3 ipTM=0.242 tol=3.66
2024-07-13 04:31:19,253 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=58.6 pTM=0.299 ipTM=0.259 tol=3.14
2024-07-13 04:31:25,999 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=58.3 pTM=0.301 ipTM=0.241 tol=3.24
2024-07-13 04:31:32,737 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=58.7 pTM=0.302 ipTM=0.248 tol=2.76
2024-07-13 04:31:39,481 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=58.7 pTM=0.302 ipTM=0.23 tol=2.04
2024-07-13 04:31:46,222 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=59.1 pTM=0.3 ipTM=0.262 tol=2.48
2024-07-13 04:31:52,964 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=58.2 pTM=0.302 ipTM=0.229 tol=3.1
2024-07-13 04:31:59,704 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=58.6 pTM=0.299 ipTM=0.243 tol=2.98
2024-07-13 04:32:06,445 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=58.7 pTM=0.301 ipTM=0.235 tol=2.57
2024-07-13 04:32:13,186 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=58.8 pTM=0.299 ipTM=0.204 tol=1.29
2024-07-13 04:32:19,928 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=58.8 pTM=0.302 ipTM=0.255 tol=2.47
2024-07-13 04:32:26,668 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=59.2 pTM=0.3 ipTM=0.246 tol=2.93
2024-07-13 04:32:33,414 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=58.5 pTM=0.301 ipTM=0.211 tol=2.4
2024-07-13 04:32:40,153 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=58.9 pTM=0.297 ipTM=0.253 tol=2.26
2024-07-13 04:32:46,900 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=58.6 pTM=0.299 ipTM=0.222 tol=2.05
2024-07-13 04:32:53,649 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=59.2 pTM=0.299 ipTM=0.249 tol=1.99
2024-07-13 04:33:00,396 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=58.8 pTM=0.302 ipTM=0.233 tol=2.18
2024-07-13 04:33:07,143 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=58.8 pTM=0.297 ipTM=0.239 tol=2.98
2024-07-13 04:33:13,888 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=58.2 pTM=0.301 ipTM=0.204 tol=2.85
2024-07-13 04:33:20,626 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=60 pTM=0.302 ipTM=0.388 tol=2.53
2024-07-13 04:33:27,362 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=58.7 pTM=0.304 ipTM=0.25 tol=2.09
2024-07-13 04:33:34,099 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=60 pTM=0.302 ipTM=0.386 tol=2.11
2024-07-13 04:33:40,838 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=59.2 pTM=0.301 ipTM=0.32 tol=2.7
2024-07-13 04:33:47,575 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=58.7 pTM=0.298 ipTM=0.242 tol=2.5
2024-07-13 04:33:54,313 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=58.6 pTM=0.301 ipTM=0.219 tol=2.06
2024-07-13 04:33:54,314 alphafold2_multimer_v3_model_5_seed_000 took 209.0s (30 recycles)
2024-07-13 04:33:54,532 reranking models by 'multimer' metric
2024-07-13 04:34:10,581 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-13 04:34:42,592 Relaxation took 48.1s
2024-07-13 04:34:42,592 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=58.1 pTM=0.328 ipTM=0.223
2024-07-13 04:34:58,009 Relaxation took 15.4s
2024-07-13 04:34:58,009 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=61.4 pTM=0.303 ipTM=0.225
2024-07-13 04:35:32,884 Relaxation took 34.9s
2024-07-13 04:35:32,885 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=58.6 pTM=0.301 ipTM=0.219
2024-07-13 04:36:03,471 Relaxation took 30.6s
2024-07-13 04:36:03,471 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=59.1 pTM=0.303 ipTM=0.194
2024-07-13 04:36:39,714 Relaxation took 36.2s
2024-07-13 04:36:39,714 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=57.3 pTM=0.307 ipTM=0.187
2024-07-13 04:36:42,780 Done