2024-07-13 04:21:11,567 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-13 04:21:11,890 Running on GPU 2024-07-13 04:21:22,723 Found 6 citations for tools or databases 2024-07-13 04:21:22,724 Query 1/1: SNR25_CAPON (length 638) 2024-07-13 04:21:23,175 Sleeping for 7s. Reason: PENDING 2024-07-13 04:21:30,589 Sleeping for 10s. Reason: RUNNING 2024-07-13 04:21:41,023 Sleeping for 5s. Reason: RUNNING 2024-07-13 04:21:46,449 Sleeping for 5s. Reason: RUNNING 2024-07-13 04:21:51,854 Sleeping for 9s. Reason: RUNNING 2024-07-13 04:22:02,763 Sleeping for 9s. Reason: PENDING 2024-07-13 04:22:12,179 Sleeping for 5s. Reason: RUNNING 2024-07-13 04:22:17,603 Sleeping for 6s. Reason: RUNNING 2024-07-13 04:22:25,529 Setting max_seq=508, max_extra_seq=2048 2024-07-13 04:25:28,292 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=50.1 pTM=0.33 ipTM=0.149 2024-07-13 04:25:36,646 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=50.7 pTM=0.32 ipTM=0.154 tol=11 2024-07-13 04:25:45,007 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=50.5 pTM=0.318 ipTM=0.159 tol=5.3 2024-07-13 04:25:53,389 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=50.7 pTM=0.32 ipTM=0.176 tol=3.63 2024-07-13 04:26:01,775 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=50.7 pTM=0.322 ipTM=0.179 tol=3.87 2024-07-13 04:26:10,171 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=50.7 pTM=0.321 ipTM=0.179 tol=3.19 2024-07-13 04:26:18,568 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=50.8 pTM=0.324 ipTM=0.191 tol=2.76 2024-07-13 04:26:26,969 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=50.8 pTM=0.324 ipTM=0.194 tol=3.18 2024-07-13 04:26:35,377 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=51.2 pTM=0.324 ipTM=0.195 tol=3.07 2024-07-13 04:26:43,785 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=51.1 pTM=0.326 ipTM=0.199 tol=3.4 2024-07-13 04:26:52,208 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=50.9 pTM=0.324 ipTM=0.195 tol=2.49 2024-07-13 04:27:00,633 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=50.9 pTM=0.323 ipTM=0.193 tol=2.55 2024-07-13 04:27:09,065 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=50.9 pTM=0.324 ipTM=0.202 tol=1.7 2024-07-13 04:27:17,494 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=50.9 pTM=0.326 ipTM=0.202 tol=1.95 2024-07-13 04:27:25,920 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=51.1 pTM=0.327 ipTM=0.207 tol=3.15 2024-07-13 04:27:34,347 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=50.7 pTM=0.327 ipTM=0.204 tol=2.95 2024-07-13 04:27:42,778 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=50.7 pTM=0.328 ipTM=0.208 tol=1.87 2024-07-13 04:27:51,210 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=50.6 pTM=0.325 ipTM=0.196 tol=3.56 2024-07-13 04:27:59,653 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=50.9 pTM=0.326 ipTM=0.203 tol=2.88 2024-07-13 04:28:08,096 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=50.8 pTM=0.327 ipTM=0.199 tol=2.98 2024-07-13 04:28:16,541 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=50.7 pTM=0.329 ipTM=0.209 tol=1.32 2024-07-13 04:28:24,984 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=50.4 pTM=0.328 ipTM=0.207 tol=1.88 2024-07-13 04:28:33,424 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=50.6 pTM=0.328 ipTM=0.208 tol=1.55 2024-07-13 04:28:41,871 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=50.7 pTM=0.327 ipTM=0.202 tol=1.66 2024-07-13 04:28:50,321 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=50.7 pTM=0.325 ipTM=0.201 tol=1.66 2024-07-13 04:28:58,768 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=50.8 pTM=0.326 ipTM=0.201 tol=1.54 2024-07-13 04:29:07,220 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=50.5 pTM=0.326 ipTM=0.205 tol=1.67 2024-07-13 04:29:15,669 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=50.1 pTM=0.327 ipTM=0.2 tol=2.3 2024-07-13 04:29:24,121 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=50.4 pTM=0.327 ipTM=0.203 tol=2.38 2024-07-13 04:29:32,569 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=50.3 pTM=0.329 ipTM=0.205 tol=3.21 2024-07-13 04:29:41,017 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=50.4 pTM=0.329 ipTM=0.206 tol=2.74 2024-07-13 04:29:41,018 alphafold2_multimer_v3_model_1_seed_000 took 405.4s (30 recycles) 2024-07-13 04:29:49,745 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=50 pTM=0.326 ipTM=0.147 2024-07-13 04:29:58,214 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=52.2 pTM=0.323 ipTM=0.159 tol=9.73 2024-07-13 04:30:06,691 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=53.5 pTM=0.321 ipTM=0.143 tol=9.18 2024-07-13 04:30:15,179 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=53.1 pTM=0.318 ipTM=0.134 tol=6.23 2024-07-13 04:30:23,670 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=52.7 pTM=0.317 ipTM=0.134 tol=5.71 2024-07-13 04:30:32,161 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=52.6 pTM=0.317 ipTM=0.138 tol=4.01 2024-07-13 04:30:40,655 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=52.9 pTM=0.316 ipTM=0.132 tol=4.18 2024-07-13 04:30:49,150 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=53.2 pTM=0.317 ipTM=0.133 tol=5.93 2024-07-13 04:30:57,640 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=53.1 pTM=0.316 ipTM=0.129 tol=2.83 2024-07-13 04:31:06,130 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=53.4 pTM=0.317 ipTM=0.135 tol=4.07 2024-07-13 04:31:14,623 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=53 pTM=0.316 ipTM=0.129 tol=6.45 2024-07-13 04:31:23,124 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=52.6 pTM=0.315 ipTM=0.129 tol=5.17 2024-07-13 04:31:31,624 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=52.8 pTM=0.315 ipTM=0.125 tol=4.41 2024-07-13 04:31:40,127 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=53 pTM=0.315 ipTM=0.127 tol=3.51 2024-07-13 04:31:48,624 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=53.1 pTM=0.315 ipTM=0.127 tol=4.02 2024-07-13 04:31:57,116 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=53.1 pTM=0.316 ipTM=0.132 tol=4.88 2024-07-13 04:32:05,610 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=53 pTM=0.314 ipTM=0.127 tol=3.17 2024-07-13 04:32:14,109 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=53.1 pTM=0.316 ipTM=0.13 tol=5.1 2024-07-13 04:32:22,611 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=52.9 pTM=0.316 ipTM=0.128 tol=2.37 2024-07-13 04:32:31,105 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=53 pTM=0.316 ipTM=0.132 tol=4.64 2024-07-13 04:32:39,602 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=52.6 pTM=0.317 ipTM=0.135 tol=3.07 2024-07-13 04:32:48,096 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=52.8 pTM=0.318 ipTM=0.139 tol=3.49 2024-07-13 04:32:56,590 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=53 pTM=0.319 ipTM=0.14 tol=4.55 2024-07-13 04:33:05,091 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=52.8 pTM=0.318 ipTM=0.136 tol=5.88 2024-07-13 04:33:13,593 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=53.1 pTM=0.316 ipTM=0.133 tol=4.72 2024-07-13 04:33:22,094 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=52.9 pTM=0.316 ipTM=0.132 tol=2.98 2024-07-13 04:33:30,593 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=53 pTM=0.315 ipTM=0.13 tol=2.47 2024-07-13 04:33:39,087 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=53 pTM=0.317 ipTM=0.133 tol=3.38 2024-07-13 04:33:47,585 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=53 pTM=0.315 ipTM=0.13 tol=3.63 2024-07-13 04:33:56,093 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=52.7 pTM=0.317 ipTM=0.135 tol=2.87 2024-07-13 04:34:04,598 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=52.9 pTM=0.316 ipTM=0.133 tol=2.07 2024-07-13 04:34:04,599 alphafold2_multimer_v3_model_2_seed_000 took 263.3s (30 recycles) 2024-07-13 04:34:13,353 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=47.8 pTM=0.336 ipTM=0.226 2024-07-13 04:34:21,828 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=49.8 pTM=0.319 ipTM=0.257 tol=11.1 2024-07-13 04:34:30,300 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=49.9 pTM=0.325 ipTM=0.224 tol=8.73 2024-07-13 04:34:38,793 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=49.8 pTM=0.326 ipTM=0.216 tol=8.29 2024-07-13 04:34:47,283 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=49.6 pTM=0.331 ipTM=0.24 tol=4.47 2024-07-13 04:34:55,781 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=50 pTM=0.332 ipTM=0.255 tol=5.12 2024-07-13 04:35:04,283 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=49.5 pTM=0.323 ipTM=0.221 tol=4.96 2024-07-13 04:35:12,791 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=50.1 pTM=0.327 ipTM=0.235 tol=3.19 2024-07-13 04:35:21,297 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=49.7 pTM=0.319 ipTM=0.201 tol=3 2024-07-13 04:35:29,801 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=50.1 pTM=0.323 ipTM=0.215 tol=5.18 2024-07-13 04:35:38,300 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=50.1 pTM=0.321 ipTM=0.208 tol=4.62 2024-07-13 04:35:46,796 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=50.5 pTM=0.327 ipTM=0.236 tol=2.41 2024-07-13 04:35:55,288 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=49.7 pTM=0.322 ipTM=0.214 tol=2.4 2024-07-13 04:36:03,779 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=50.3 pTM=0.327 ipTM=0.234 tol=2.92 2024-07-13 04:36:12,266 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=50.2 pTM=0.327 ipTM=0.229 tol=2.82 2024-07-13 04:36:20,757 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=50.3 pTM=0.322 ipTM=0.218 tol=2.63 2024-07-13 04:36:29,247 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=50.1 pTM=0.324 ipTM=0.224 tol=2.94 2024-07-13 04:36:37,736 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=50.1 pTM=0.327 ipTM=0.244 tol=2.09 2024-07-13 04:36:46,237 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=49.8 pTM=0.324 ipTM=0.225 tol=3.34 2024-07-13 04:36:54,739 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=50 pTM=0.327 ipTM=0.241 tol=3.56 2024-07-13 04:37:03,233 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=49.9 pTM=0.325 ipTM=0.218 tol=3.19 2024-07-13 04:37:11,727 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=50.3 pTM=0.329 ipTM=0.241 tol=2.68 2024-07-13 04:37:20,216 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=50.1 pTM=0.321 ipTM=0.217 tol=2.98 2024-07-13 04:37:28,703 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=50.2 pTM=0.329 ipTM=0.239 tol=3.01 2024-07-13 04:37:37,194 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=50.3 pTM=0.325 ipTM=0.223 tol=2.48 2024-07-13 04:37:45,692 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=49.9 pTM=0.329 ipTM=0.248 tol=1.79 2024-07-13 04:37:54,190 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=49.9 pTM=0.325 ipTM=0.221 tol=2.89 2024-07-13 04:38:02,679 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=50 pTM=0.332 ipTM=0.256 tol=4.03 2024-07-13 04:38:11,163 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=50.4 pTM=0.328 ipTM=0.236 tol=2.02 2024-07-13 04:38:19,654 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=50 pTM=0.331 ipTM=0.247 tol=4.29 2024-07-13 04:38:28,150 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=50.6 pTM=0.325 ipTM=0.22 tol=4.22 2024-07-13 04:38:28,151 alphafold2_multimer_v3_model_3_seed_000 took 263.3s (30 recycles) 2024-07-13 04:38:36,876 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=47.9 pTM=0.341 ipTM=0.219 2024-07-13 04:38:45,348 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=48.7 pTM=0.325 ipTM=0.183 tol=8.39 2024-07-13 04:38:53,819 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=49.6 pTM=0.324 ipTM=0.18 tol=7.47 2024-07-13 04:39:02,292 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=49.5 pTM=0.331 ipTM=0.208 tol=4.83 2024-07-13 04:39:10,760 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=50.4 pTM=0.338 ipTM=0.233 tol=3.38 2024-07-13 04:39:19,241 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=49.6 pTM=0.339 ipTM=0.241 tol=2.49 2024-07-13 04:39:27,728 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=50.2 pTM=0.337 ipTM=0.234 tol=5.16 2024-07-13 04:39:36,209 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=49.6 pTM=0.334 ipTM=0.219 tol=3.62 2024-07-13 04:39:44,684 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=50.6 pTM=0.335 ipTM=0.229 tol=3.33 2024-07-13 04:39:53,162 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=49.5 pTM=0.333 ipTM=0.216 tol=2.36 2024-07-13 04:40:01,638 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=50.5 pTM=0.333 ipTM=0.214 tol=3.78 2024-07-13 04:40:10,121 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=49.6 pTM=0.331 ipTM=0.207 tol=3.35 2024-07-13 04:40:18,597 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=50.5 pTM=0.332 ipTM=0.212 tol=2.24 2024-07-13 04:40:27,076 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=50 pTM=0.331 ipTM=0.198 tol=2.16 2024-07-13 04:40:35,551 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=50.6 pTM=0.333 ipTM=0.213 tol=3.19 2024-07-13 04:40:44,029 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=49.8 pTM=0.33 ipTM=0.196 tol=1.87 2024-07-13 04:40:52,504 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=50.3 pTM=0.334 ipTM=0.23 tol=3.7 2024-07-13 04:41:00,985 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=50.3 pTM=0.332 ipTM=0.217 tol=3.23 2024-07-13 04:41:09,468 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=50.8 pTM=0.334 ipTM=0.236 tol=3.92 2024-07-13 04:41:17,952 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=49.9 pTM=0.334 ipTM=0.226 tol=4.53 2024-07-13 04:41:26,435 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=50.7 pTM=0.335 ipTM=0.233 tol=4.25 2024-07-13 04:41:34,914 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=49.5 pTM=0.333 ipTM=0.211 tol=4.63 2024-07-13 04:41:43,398 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=50.1 pTM=0.335 ipTM=0.231 tol=2.87 2024-07-13 04:41:51,888 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=50.3 pTM=0.332 ipTM=0.211 tol=3.23 2024-07-13 04:42:00,380 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=51.2 pTM=0.331 ipTM=0.22 tol=2.27 2024-07-13 04:42:08,874 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=50.3 pTM=0.327 ipTM=0.194 tol=4.24 2024-07-13 04:42:17,366 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=50.8 pTM=0.331 ipTM=0.219 tol=4.05 2024-07-13 04:42:25,857 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=50 pTM=0.331 ipTM=0.204 tol=2.06 2024-07-13 04:42:34,354 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=50.9 pTM=0.332 ipTM=0.218 tol=2.81 2024-07-13 04:42:42,851 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=49.9 pTM=0.332 ipTM=0.216 tol=2.82 2024-07-13 04:42:51,347 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=50.5 pTM=0.332 ipTM=0.227 tol=1.88 2024-07-13 04:42:51,348 alphafold2_multimer_v3_model_4_seed_000 took 262.9s (30 recycles) 2024-07-13 04:43:00,110 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=48.4 pTM=0.319 ipTM=0.168 2024-07-13 04:43:08,615 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=50 pTM=0.31 ipTM=0.155 tol=7.76 2024-07-13 04:43:17,121 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=50.6 pTM=0.309 ipTM=0.133 tol=9.81 2024-07-13 04:43:25,627 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=50.7 pTM=0.305 ipTM=0.139 tol=6.2 2024-07-13 04:43:34,143 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=51 pTM=0.307 ipTM=0.123 tol=6.2 2024-07-13 04:43:42,651 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=50.5 pTM=0.305 ipTM=0.129 tol=5.17 2024-07-13 04:43:51,170 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=50.8 pTM=0.304 ipTM=0.115 tol=5.73 2024-07-13 04:43:59,682 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=50.8 pTM=0.305 ipTM=0.132 tol=6.77 2024-07-13 04:44:08,195 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=51.3 pTM=0.305 ipTM=0.117 tol=4.47 2024-07-13 04:44:16,708 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=51.3 pTM=0.307 ipTM=0.139 tol=5.38 2024-07-13 04:44:25,216 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=50.9 pTM=0.307 ipTM=0.131 tol=3.08 2024-07-13 04:44:33,732 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=51.6 pTM=0.307 ipTM=0.149 tol=4.18 2024-07-13 04:44:42,243 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=50.6 pTM=0.305 ipTM=0.15 tol=6.77 2024-07-13 04:44:50,757 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=51.4 pTM=0.307 ipTM=0.146 tol=4.47 2024-07-13 04:44:59,273 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=51.2 pTM=0.308 ipTM=0.136 tol=4.38 2024-07-13 04:45:07,789 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=51.7 pTM=0.31 ipTM=0.137 tol=3.33 2024-07-13 04:45:16,289 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=51 pTM=0.31 ipTM=0.144 tol=3.47 2024-07-13 04:45:24,806 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=51.7 pTM=0.31 ipTM=0.161 tol=5.13 2024-07-13 04:45:33,315 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=50.6 pTM=0.308 ipTM=0.15 tol=5.67 2024-07-13 04:45:41,836 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=51.4 pTM=0.309 ipTM=0.141 tol=5.65 2024-07-13 04:45:50,356 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=50.9 pTM=0.312 ipTM=0.127 tol=7.25 2024-07-13 04:45:58,862 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=50.9 pTM=0.311 ipTM=0.129 tol=3.04 2024-07-13 04:46:07,364 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=51.5 pTM=0.309 ipTM=0.151 tol=4.53 2024-07-13 04:46:15,874 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=51.3 pTM=0.31 ipTM=0.129 tol=2.91 2024-07-13 04:46:24,378 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=52 pTM=0.311 ipTM=0.164 tol=3.58 2024-07-13 04:46:32,883 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=51 pTM=0.309 ipTM=0.163 tol=5.18 2024-07-13 04:46:41,404 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=51.4 pTM=0.309 ipTM=0.156 tol=3.44 2024-07-13 04:46:49,915 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=50.6 pTM=0.31 ipTM=0.132 tol=4.41 2024-07-13 04:46:58,433 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=51.8 pTM=0.309 ipTM=0.15 tol=3.48 2024-07-13 04:47:06,951 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=51 pTM=0.31 ipTM=0.129 tol=4.29 2024-07-13 04:47:15,456 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=51.8 pTM=0.31 ipTM=0.14 tol=4.21 2024-07-13 04:47:15,457 alphafold2_multimer_v3_model_5_seed_000 took 263.8s (30 recycles) 2024-07-13 04:47:17,270 reranking models by 'multimer' metric 2024-07-13 04:47:18,638 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-13 04:48:06,800 Relaxation took 49.5s 2024-07-13 04:48:06,800 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=50.5 pTM=0.332 ipTM=0.227 2024-07-13 04:48:39,973 Relaxation took 33.2s 2024-07-13 04:48:39,973 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=50.6 pTM=0.325 ipTM=0.22 2024-07-13 04:49:19,826 Relaxation took 39.9s 2024-07-13 04:49:19,826 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=50.4 pTM=0.329 ipTM=0.206 2024-07-13 04:49:53,972 Relaxation took 34.1s 2024-07-13 04:49:53,972 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=51.8 pTM=0.31 ipTM=0.14 2024-07-13 04:50:32,715 Relaxation took 38.7s 2024-07-13 04:50:32,715 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=52.9 pTM=0.316 ipTM=0.133 2024-07-13 04:50:33,923 Done