2024-07-13 05:29:51,605 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 05:29:51,941 Running on GPU
2024-07-13 05:29:58,868 Found 6 citations for tools or databases
2024-07-13 05:29:58,869 Query 1/1: SPDEF_GCSP (length 1355)
2024-07-13 05:29:59,326 Sleeping for 5s. Reason: PENDING
2024-07-13 05:30:04,746 Sleeping for 6s. Reason: RUNNING
2024-07-13 05:30:11,173 Sleeping for 8s. Reason: RUNNING
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2024-07-13 05:30:45,881 Sleeping for 9s. Reason: RUNNING
2024-07-13 05:30:55,304 Sleeping for 7s. Reason: RUNNING
2024-07-13 05:31:02,743 Sleeping for 6s. Reason: RUNNING
2024-07-13 05:31:09,162 Sleeping for 6s. Reason: RUNNING
2024-07-13 05:31:15,568 Sleeping for 8s. Reason: RUNNING
2024-07-13 05:31:24,018 Sleeping for 8s. Reason: RUNNING
2024-07-13 05:31:32,449 Sleeping for 7s. Reason: RUNNING
2024-07-13 05:31:39,906 Sleeping for 9s. Reason: RUNNING
2024-07-13 05:31:49,348 Sleeping for 8s. Reason: RUNNING
2024-07-13 05:31:57,777 Sleeping for 9s. Reason: RUNNING
2024-07-13 05:32:07,212 Sleeping for 5s. Reason: RUNNING
2024-07-13 05:32:16,082 Sleeping for 6s. Reason: PENDING
2024-07-13 05:32:22,495 Sleeping for 8s. Reason: RUNNING
2024-07-13 05:32:30,915 Sleeping for 5s. Reason: RUNNING
2024-07-13 05:32:36,344 Sleeping for 9s. Reason: RUNNING
2024-07-13 05:32:45,763 Sleeping for 10s. Reason: RUNNING
2024-07-13 05:32:56,199 Sleeping for 5s. Reason: RUNNING
2024-07-13 05:33:01,607 Sleeping for 10s. Reason: RUNNING
2024-07-13 05:33:12,023 Sleeping for 8s. Reason: RUNNING
2024-07-13 05:33:20,445 Sleeping for 5s. Reason: RUNNING
2024-07-13 05:33:25,864 Sleeping for 10s. Reason: RUNNING
2024-07-13 05:33:36,301 Sleeping for 7s. Reason: RUNNING
2024-07-13 05:33:43,729 Sleeping for 5s. Reason: RUNNING
2024-07-13 05:33:49,188 Sleeping for 7s. Reason: RUNNING
2024-07-13 05:33:56,608 Sleeping for 8s. Reason: RUNNING
2024-07-13 05:34:05,034 Sleeping for 10s. Reason: RUNNING
2024-07-13 05:34:15,474 Sleeping for 5s. Reason: RUNNING
2024-07-13 05:34:20,887 Sleeping for 5s. Reason: RUNNING
2024-07-13 05:34:26,308 Sleeping for 5s. Reason: RUNNING
2024-07-13 05:34:38,341 Setting max_seq=508, max_extra_seq=2048
2024-07-13 05:38:07,377 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=78.2 pTM=0.723 ipTM=0.155
2024-07-13 05:38:57,416 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=78.1 pTM=0.728 ipTM=0.162 tol=11.2
2024-07-13 05:39:47,540 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=78.4 pTM=0.729 ipTM=0.168 tol=5.68
2024-07-13 05:40:37,706 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=78.6 pTM=0.729 ipTM=0.187 tol=3.22
2024-07-13 05:41:27,907 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=78.8 pTM=0.729 ipTM=0.201 tol=2.54
2024-07-13 05:42:18,051 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=78.7 pTM=0.729 ipTM=0.274 tol=3.06
2024-07-13 05:43:08,225 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=78.8 pTM=0.731 ipTM=0.294 tol=2.35
2024-07-13 05:43:58,337 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=78.8 pTM=0.731 ipTM=0.294 tol=2.31
2024-07-13 05:44:48,435 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=78.6 pTM=0.732 ipTM=0.285 tol=3.27
2024-07-13 05:45:38,559 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=78.9 pTM=0.734 ipTM=0.293 tol=1.82
2024-07-13 05:46:28,660 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=78.9 pTM=0.732 ipTM=0.279 tol=2.75
2024-07-13 05:47:18,816 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=79 pTM=0.733 ipTM=0.282 tol=2.19
2024-07-13 05:48:08,929 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=78.8 pTM=0.733 ipTM=0.282 tol=2.43
2024-07-13 05:48:59,020 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=78.8 pTM=0.733 ipTM=0.268 tol=1.17
2024-07-13 05:49:49,121 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=78.8 pTM=0.733 ipTM=0.269 tol=1.68
2024-07-13 05:50:39,210 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=78.8 pTM=0.733 ipTM=0.282 tol=1.52
2024-07-13 05:51:29,293 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=78.8 pTM=0.733 ipTM=0.276 tol=2.16
2024-07-13 05:52:19,409 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=78.9 pTM=0.733 ipTM=0.273 tol=1.88
2024-07-13 05:53:09,520 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=78.8 pTM=0.733 ipTM=0.269 tol=1.25
2024-07-13 05:53:59,618 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=78.8 pTM=0.733 ipTM=0.28 tol=0.565
2024-07-13 05:54:49,741 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=78.8 pTM=0.733 ipTM=0.277 tol=0.572
2024-07-13 05:55:39,882 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=78.7 pTM=0.732 ipTM=0.277 tol=1.84
2024-07-13 05:56:30,046 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=78.8 pTM=0.732 ipTM=0.268 tol=1.43
2024-07-13 05:57:20,194 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=78.9 pTM=0.733 ipTM=0.263 tol=1.89
2024-07-13 05:58:10,284 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=78.8 pTM=0.733 ipTM=0.268 tol=1.73
2024-07-13 05:59:00,396 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=78.8 pTM=0.733 ipTM=0.27 tol=1.58
2024-07-13 05:59:50,499 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=78.6 pTM=0.734 ipTM=0.269 tol=4.04
2024-07-13 06:00:40,587 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=78.5 pTM=0.735 ipTM=0.279 tol=1.98
2024-07-13 06:01:30,683 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=78.4 pTM=0.736 ipTM=0.292 tol=2.54
2024-07-13 06:02:20,790 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=78.4 pTM=0.739 ipTM=0.263 tol=3.15
2024-07-13 06:03:10,917 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=78.4 pTM=0.741 ipTM=0.285 tol=2.84
2024-07-13 06:03:10,918 alphafold2_multimer_v3_model_1_seed_000 took 1709.0s (30 recycles)
2024-07-13 06:04:02,116 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=77.8 pTM=0.725 ipTM=0.166
2024-07-13 06:04:52,306 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=78.2 pTM=0.732 ipTM=0.186 tol=6.54
2024-07-13 06:05:42,427 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=78.4 pTM=0.734 ipTM=0.189 tol=5.59
2024-07-13 06:06:32,504 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=78.2 pTM=0.734 ipTM=0.195 tol=3.71
2024-07-13 06:07:22,606 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=78.8 pTM=0.737 ipTM=0.326 tol=2.42
2024-07-13 06:08:12,726 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=78.8 pTM=0.737 ipTM=0.342 tol=1.77
2024-07-13 06:09:02,828 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=78.9 pTM=0.737 ipTM=0.346 tol=1.7
2024-07-13 06:09:52,888 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=78.9 pTM=0.736 ipTM=0.341 tol=2.53
2024-07-13 06:10:42,974 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=78.9 pTM=0.736 ipTM=0.338 tol=1.46
2024-07-13 06:11:33,095 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=78.9 pTM=0.737 ipTM=0.351 tol=1.68
2024-07-13 06:12:23,232 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=79 pTM=0.736 ipTM=0.346 tol=1.03
2024-07-13 06:13:13,340 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=79.1 pTM=0.736 ipTM=0.338 tol=1.52
2024-07-13 06:14:03,420 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=78.9 pTM=0.735 ipTM=0.344 tol=1.06
2024-07-13 06:14:53,527 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=78.8 pTM=0.734 ipTM=0.333 tol=2.36
2024-07-13 06:15:43,581 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=78.9 pTM=0.735 ipTM=0.327 tol=2.27
2024-07-13 06:16:33,615 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=78.9 pTM=0.734 ipTM=0.335 tol=0.922
2024-07-13 06:17:23,696 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=78.8 pTM=0.734 ipTM=0.338 tol=1.09
2024-07-13 06:18:13,778 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=78.9 pTM=0.734 ipTM=0.328 tol=2.33
2024-07-13 06:19:03,844 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=78.6 pTM=0.733 ipTM=0.326 tol=2.14
2024-07-13 06:19:53,906 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=78.8 pTM=0.734 ipTM=0.345 tol=2.16
2024-07-13 06:20:43,967 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=78.8 pTM=0.734 ipTM=0.33 tol=2.01
2024-07-13 06:21:33,987 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=78.6 pTM=0.734 ipTM=0.333 tol=2.39
2024-07-13 06:22:24,023 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=78.8 pTM=0.735 ipTM=0.335 tol=1.61
2024-07-13 06:23:14,054 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=78.9 pTM=0.736 ipTM=0.332 tol=1.43
2024-07-13 06:24:04,088 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=78.7 pTM=0.734 ipTM=0.339 tol=1.22
2024-07-13 06:24:54,130 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=78.8 pTM=0.735 ipTM=0.331 tol=2.7
2024-07-13 06:25:44,158 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=78.8 pTM=0.736 ipTM=0.331 tol=1.81
2024-07-13 06:26:34,201 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=78.8 pTM=0.735 ipTM=0.345 tol=2.78
2024-07-13 06:27:24,215 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=78.7 pTM=0.734 ipTM=0.348 tol=1.35
2024-07-13 06:28:14,218 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=78.7 pTM=0.736 ipTM=0.333 tol=3
2024-07-13 06:29:04,280 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=78.8 pTM=0.736 ipTM=0.346 tol=1.75
2024-07-13 06:29:04,281 alphafold2_multimer_v3_model_2_seed_000 took 1552.3s (30 recycles)
2024-07-13 06:29:55,516 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=77.9 pTM=0.721 ipTM=0.149
2024-07-13 06:30:45,898 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=79 pTM=0.731 ipTM=0.177 tol=11.6
2024-07-13 06:31:36,156 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=79.2 pTM=0.727 ipTM=0.16 tol=7.23
2024-07-13 06:32:26,393 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=79.2 pTM=0.729 ipTM=0.168 tol=3.07
2024-07-13 06:33:16,683 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=79.6 pTM=0.727 ipTM=0.158 tol=3.63
2024-07-13 06:34:06,996 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=79.4 pTM=0.725 ipTM=0.153 tol=2.29
2024-07-13 06:34:57,330 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=79.5 pTM=0.725 ipTM=0.155 tol=1.55
2024-07-13 06:35:47,650 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=79.4 pTM=0.726 ipTM=0.156 tol=1.75
2024-07-13 06:36:37,975 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=79.2 pTM=0.724 ipTM=0.155 tol=3.49
2024-07-13 06:37:28,294 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=79.3 pTM=0.726 ipTM=0.156 tol=2.42
2024-07-13 06:38:18,575 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=79.4 pTM=0.725 ipTM=0.156 tol=2.36
2024-07-13 06:39:08,881 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=79.2 pTM=0.725 ipTM=0.152 tol=2.39
2024-07-13 06:39:59,134 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=79.1 pTM=0.727 ipTM=0.155 tol=3.25
2024-07-13 06:40:49,407 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=79.5 pTM=0.729 ipTM=0.163 tol=2.65
2024-07-13 06:41:39,640 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=79.4 pTM=0.727 ipTM=0.157 tol=2.34
2024-07-13 06:42:29,860 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=79.1 pTM=0.729 ipTM=0.16 tol=2.42
2024-07-13 06:43:20,060 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=79.2 pTM=0.726 ipTM=0.155 tol=2.88
2024-07-13 06:44:10,284 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=79.4 pTM=0.728 ipTM=0.158 tol=3
2024-07-13 06:45:00,496 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=79.2 pTM=0.728 ipTM=0.16 tol=2.25
2024-07-13 06:45:50,709 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=79.2 pTM=0.727 ipTM=0.158 tol=2.15
2024-07-13 06:46:40,930 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=79.2 pTM=0.726 ipTM=0.157 tol=2.26
2024-07-13 06:47:31,159 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=79.2 pTM=0.727 ipTM=0.158 tol=2.12
2024-07-13 06:48:21,370 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=79.2 pTM=0.727 ipTM=0.158 tol=1.57
2024-07-13 06:49:11,630 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=79.2 pTM=0.727 ipTM=0.16 tol=1.56
2024-07-13 06:50:01,868 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=79 pTM=0.726 ipTM=0.157 tol=2.58
2024-07-13 06:50:52,092 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=79.1 pTM=0.728 ipTM=0.162 tol=1.9
2024-07-13 06:51:42,364 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=79.2 pTM=0.724 ipTM=0.155 tol=3.03
2024-07-13 06:52:32,603 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=78.9 pTM=0.728 ipTM=0.158 tol=3.95
2024-07-13 06:53:22,819 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=79.2 pTM=0.726 ipTM=0.161 tol=2.88
2024-07-13 06:54:13,088 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=79.2 pTM=0.726 ipTM=0.155 tol=2.92
2024-07-13 06:55:03,432 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=78.9 pTM=0.725 ipTM=0.155 tol=3.03
2024-07-13 06:55:03,434 alphafold2_multimer_v3_model_3_seed_000 took 1558.1s (30 recycles)
2024-07-13 06:55:54,560 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=76.5 pTM=0.728 ipTM=0.188
2024-07-13 06:56:44,781 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=78.1 pTM=0.733 ipTM=0.187 tol=8.19
2024-07-13 06:57:35,026 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=77.5 pTM=0.729 ipTM=0.172 tol=5.66
2024-07-13 06:58:25,276 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=77.8 pTM=0.729 ipTM=0.172 tol=4.39
2024-07-13 06:59:15,535 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=77.6 pTM=0.726 ipTM=0.165 tol=4.39
2024-07-13 07:00:05,780 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=77.4 pTM=0.726 ipTM=0.165 tol=3.62
2024-07-13 07:00:56,077 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=77.6 pTM=0.725 ipTM=0.164 tol=5.47
2024-07-13 07:01:46,353 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=77.8 pTM=0.725 ipTM=0.164 tol=7.01
2024-07-13 07:02:36,573 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=77.6 pTM=0.725 ipTM=0.168 tol=4.6
2024-07-13 07:03:26,811 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=77.7 pTM=0.726 ipTM=0.167 tol=3.3
2024-07-13 07:04:17,020 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=77.6 pTM=0.725 ipTM=0.169 tol=3.99
2024-07-13 07:05:07,227 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=77.6 pTM=0.724 ipTM=0.167 tol=4.91
2024-07-13 07:05:57,407 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=77.4 pTM=0.724 ipTM=0.167 tol=4.9
2024-07-13 07:06:47,597 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=77.8 pTM=0.725 ipTM=0.167 tol=2.07
2024-07-13 07:07:37,755 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=77.6 pTM=0.724 ipTM=0.166 tol=2.69
2024-07-13 07:08:27,950 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=77.6 pTM=0.725 ipTM=0.166 tol=2.08
2024-07-13 07:09:18,119 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=77.6 pTM=0.724 ipTM=0.167 tol=2.14
2024-07-13 07:10:08,310 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=77.8 pTM=0.725 ipTM=0.167 tol=1.64
2024-07-13 07:10:58,477 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=77.5 pTM=0.725 ipTM=0.17 tol=1.3
2024-07-13 07:11:48,662 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=77.5 pTM=0.724 ipTM=0.165 tol=3.44
2024-07-13 07:12:38,853 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=77.6 pTM=0.724 ipTM=0.166 tol=6.58
2024-07-13 07:13:29,043 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=77.6 pTM=0.723 ipTM=0.165 tol=2.5
2024-07-13 07:14:19,225 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=77.6 pTM=0.724 ipTM=0.164 tol=2.05
2024-07-13 07:15:09,446 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=77.7 pTM=0.724 ipTM=0.162 tol=3.31
2024-07-13 07:15:59,613 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=77.6 pTM=0.724 ipTM=0.165 tol=3.14
2024-07-13 07:16:49,805 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=77.8 pTM=0.724 ipTM=0.165 tol=3.16
2024-07-13 07:17:39,992 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=77.6 pTM=0.724 ipTM=0.166 tol=2.86
2024-07-13 07:18:30,141 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=77.8 pTM=0.724 ipTM=0.165 tol=2.38
2024-07-13 07:19:20,294 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=77.4 pTM=0.724 ipTM=0.168 tol=2.31
2024-07-13 07:20:10,468 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=77.7 pTM=0.723 ipTM=0.163 tol=2.65
2024-07-13 07:21:00,643 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=77.6 pTM=0.724 ipTM=0.161 tol=2.4
2024-07-13 07:21:00,644 alphafold2_multimer_v3_model_4_seed_000 took 1556.1s (30 recycles)
2024-07-13 07:21:51,725 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=76.9 pTM=0.727 ipTM=0.183
2024-07-13 07:22:41,939 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=78.9 pTM=0.742 ipTM=0.511 tol=7.05
2024-07-13 07:23:32,116 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=78.7 pTM=0.742 ipTM=0.511 tol=3.63
2024-07-13 07:24:22,299 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=79 pTM=0.743 ipTM=0.489 tol=5.27
2024-07-13 07:25:12,479 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=79.2 pTM=0.744 ipTM=0.472 tol=2.04
2024-07-13 07:26:02,636 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=79.1 pTM=0.743 ipTM=0.457 tol=2.83
2024-07-13 07:26:52,843 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=79.3 pTM=0.744 ipTM=0.451 tol=2.68
2024-07-13 07:27:42,952 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=79 pTM=0.743 ipTM=0.44 tol=1.13
2024-07-13 07:28:33,092 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=79.1 pTM=0.743 ipTM=0.445 tol=1.03
2024-07-13 07:29:23,266 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=79.2 pTM=0.744 ipTM=0.459 tol=0.958
2024-07-13 07:30:13,460 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=79.1 pTM=0.743 ipTM=0.447 tol=1.22
2024-07-13 07:31:03,642 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=79.2 pTM=0.744 ipTM=0.438 tol=1.12
2024-07-13 07:31:53,817 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=79.2 pTM=0.743 ipTM=0.439 tol=2.61
2024-07-13 07:32:43,979 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=79.1 pTM=0.743 ipTM=0.435 tol=2.15
2024-07-13 07:33:34,117 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=79.2 pTM=0.743 ipTM=0.433 tol=1.44
2024-07-13 07:34:24,235 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=79.1 pTM=0.743 ipTM=0.433 tol=1.15
2024-07-13 07:35:14,396 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=79.2 pTM=0.743 ipTM=0.427 tol=3.03
2024-07-13 07:36:04,527 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=79.2 pTM=0.743 ipTM=0.419 tol=2.84
2024-07-13 07:36:54,633 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=79.1 pTM=0.743 ipTM=0.416 tol=1.13
2024-07-13 07:37:44,726 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=78.9 pTM=0.742 ipTM=0.43 tol=1.9
2024-07-13 07:38:34,852 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=79.2 pTM=0.744 ipTM=0.435 tol=1.47
2024-07-13 07:39:24,929 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=79 pTM=0.742 ipTM=0.435 tol=1.74
2024-07-13 07:40:15,036 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=79.1 pTM=0.743 ipTM=0.426 tol=0.919
2024-07-13 07:41:05,135 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=79.2 pTM=0.743 ipTM=0.431 tol=0.672
2024-07-13 07:41:55,250 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=79.4 pTM=0.744 ipTM=0.434 tol=0.692
2024-07-13 07:42:45,323 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=79.2 pTM=0.743 ipTM=0.425 tol=2.07
2024-07-13 07:43:35,420 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=79.1 pTM=0.742 ipTM=0.436 tol=2.39
2024-07-13 07:44:25,524 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=79.1 pTM=0.743 ipTM=0.438 tol=0.928
2024-07-13 07:45:15,666 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=79.1 pTM=0.743 ipTM=0.44 tol=0.677
2024-07-13 07:46:05,823 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=79.1 pTM=0.743 ipTM=0.433 tol=1.21
2024-07-13 07:46:56,022 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=79.1 pTM=0.743 ipTM=0.439 tol=0.759
2024-07-13 07:46:56,023 alphafold2_multimer_v3_model_5_seed_000 took 1554.3s (30 recycles)
2024-07-13 07:46:57,087 reranking models by 'multimer' metric
2024-07-13 07:47:18,413 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-13 07:49:53,274 Relaxation took 176.2s
2024-07-13 07:49:53,274 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=79.1 pTM=0.743 ipTM=0.439
2024-07-13 07:52:54,398 Relaxation took 181.1s
2024-07-13 07:52:54,398 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=78.8 pTM=0.736 ipTM=0.346
2024-07-13 07:56:19,090 Relaxation took 204.7s
2024-07-13 07:56:19,090 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=78.4 pTM=0.741 ipTM=0.285
2024-07-13 07:59:41,858 Relaxation took 202.8s
2024-07-13 07:59:41,858 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=77.6 pTM=0.724 ipTM=0.161
2024-07-13 08:01:54,778 Relaxation took 132.9s
2024-07-13 08:01:54,778 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=78.9 pTM=0.725 ipTM=0.155
2024-07-13 08:01:57,930 Done