2024-07-13 06:44:53,546 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 06:44:53,871 Running on GPU
2024-07-13 06:45:05,171 Found 6 citations for tools or databases
2024-07-13 06:45:05,171 Query 1/1: SSR1_SYT15 (length 812)
2024-07-13 06:45:05,728 Sleeping for 10s. Reason: PENDING
2024-07-13 06:45:16,161 Sleeping for 8s. Reason: RUNNING
2024-07-13 06:45:24,589 Sleeping for 9s. Reason: RUNNING
2024-07-13 06:45:34,001 Sleeping for 5s. Reason: RUNNING
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2024-07-13 06:45:47,892 Sleeping for 6s. Reason: RUNNING
2024-07-13 06:45:54,315 Sleeping for 9s. Reason: RUNNING
2024-07-13 06:46:03,783 Sleeping for 10s. Reason: RUNNING
2024-07-13 06:46:14,199 Sleeping for 5s. Reason: RUNNING
2024-07-13 06:46:19,618 Sleeping for 10s. Reason: RUNNING
2024-07-13 06:46:30,036 Sleeping for 6s. Reason: RUNNING
2024-07-13 06:46:36,456 Sleeping for 5s. Reason: RUNNING
2024-07-13 06:46:41,888 Sleeping for 5s. Reason: RUNNING
2024-07-13 06:46:47,291 Sleeping for 10s. Reason: RUNNING
2024-07-13 06:46:57,697 Sleeping for 8s. Reason: RUNNING
2024-07-13 06:47:06,130 Sleeping for 9s. Reason: RUNNING
2024-07-13 06:47:15,567 Sleeping for 10s. Reason: RUNNING
2024-07-13 06:47:25,985 Sleeping for 5s. Reason: RUNNING
2024-07-13 06:47:31,402 Sleeping for 10s. Reason: RUNNING
2024-07-13 06:47:41,832 Sleeping for 9s. Reason: RUNNING
2024-07-13 06:47:51,254 Sleeping for 10s. Reason: RUNNING
2024-07-13 06:48:01,681 Sleeping for 9s. Reason: RUNNING
2024-07-13 06:48:11,121 Sleeping for 6s. Reason: RUNNING
2024-07-13 06:48:17,567 Sleeping for 5s. Reason: RUNNING
2024-07-13 06:48:24,866 Sleeping for 7s. Reason: PENDING
2024-07-13 06:48:32,271 Sleeping for 6s. Reason: RUNNING
2024-07-13 06:48:38,687 Sleeping for 7s. Reason: RUNNING
2024-07-13 06:48:46,119 Sleeping for 10s. Reason: RUNNING
2024-07-13 06:48:56,562 Sleeping for 10s. Reason: RUNNING
2024-07-13 06:49:06,981 Sleeping for 7s. Reason: RUNNING
2024-07-13 06:49:14,417 Sleeping for 9s. Reason: RUNNING
2024-07-13 06:49:23,838 Sleeping for 6s. Reason: RUNNING
2024-07-13 06:49:30,263 Sleeping for 5s. Reason: RUNNING
2024-07-13 06:49:35,681 Sleeping for 9s. Reason: RUNNING
2024-07-13 06:49:45,119 Sleeping for 9s. Reason: RUNNING
2024-07-13 06:49:54,539 Sleeping for 6s. Reason: RUNNING
2024-07-13 06:50:00,954 Sleeping for 9s. Reason: RUNNING
2024-07-13 06:50:10,398 Sleeping for 7s. Reason: RUNNING
2024-07-13 06:50:20,738 Setting max_seq=508, max_extra_seq=2048
2024-07-13 06:53:40,350 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=56.8 pTM=0.44 ipTM=0.222
2024-07-13 06:53:53,654 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=59.9 pTM=0.422 ipTM=0.203 tol=11.6
2024-07-13 06:54:06,987 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=60.4 pTM=0.425 ipTM=0.207 tol=4.87
2024-07-13 06:54:20,327 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=60.2 pTM=0.42 ipTM=0.195 tol=3.15
2024-07-13 06:54:33,710 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=60 pTM=0.426 ipTM=0.196 tol=2.98
2024-07-13 06:54:47,090 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=59.3 pTM=0.423 ipTM=0.194 tol=2.7
2024-07-13 06:55:00,488 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=59.8 pTM=0.424 ipTM=0.199 tol=1.91
2024-07-13 06:55:13,880 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=60.1 pTM=0.425 ipTM=0.193 tol=2.31
2024-07-13 06:55:27,265 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=59.8 pTM=0.421 ipTM=0.192 tol=2.19
2024-07-13 06:55:40,651 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=60.4 pTM=0.425 ipTM=0.192 tol=1.95
2024-07-13 06:55:54,053 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60.1 pTM=0.421 ipTM=0.192 tol=2.47
2024-07-13 06:56:07,449 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=60.4 pTM=0.424 ipTM=0.191 tol=1.79
2024-07-13 06:56:20,845 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60.3 pTM=0.423 ipTM=0.191 tol=2.51
2024-07-13 06:56:34,254 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=60.3 pTM=0.423 ipTM=0.188 tol=3.27
2024-07-13 06:56:47,659 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.2 pTM=0.426 ipTM=0.193 tol=2.84
2024-07-13 06:57:01,077 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.2 pTM=0.422 ipTM=0.189 tol=2.02
2024-07-13 06:57:14,517 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60 pTM=0.422 ipTM=0.197 tol=1.87
2024-07-13 06:57:27,946 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60.6 pTM=0.423 ipTM=0.188 tol=2.15
2024-07-13 06:57:41,372 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=59.3 pTM=0.424 ipTM=0.195 tol=2.39
2024-07-13 06:57:54,812 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=59.9 pTM=0.426 ipTM=0.198 tol=3.13
2024-07-13 06:58:08,242 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=60.7 pTM=0.426 ipTM=0.202 tol=3.11
2024-07-13 06:58:21,692 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=60.7 pTM=0.423 ipTM=0.193 tol=1.78
2024-07-13 06:58:35,135 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60 pTM=0.422 ipTM=0.194 tol=1.98
2024-07-13 06:58:48,574 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=59.9 pTM=0.423 ipTM=0.193 tol=2.13
2024-07-13 06:59:02,005 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60.1 pTM=0.425 ipTM=0.195 tol=1.52
2024-07-13 06:59:15,446 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.1 pTM=0.425 ipTM=0.193 tol=2.36
2024-07-13 06:59:28,889 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=59.9 pTM=0.429 ipTM=0.204 tol=2.35
2024-07-13 06:59:42,325 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=60.4 pTM=0.429 ipTM=0.199 tol=1.93
2024-07-13 06:59:55,745 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=60.1 pTM=0.427 ipTM=0.204 tol=1.98
2024-07-13 07:00:09,177 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.3 pTM=0.43 ipTM=0.201 tol=2.41
2024-07-13 07:00:22,599 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=59.6 pTM=0.427 ipTM=0.201 tol=2.2
2024-07-13 07:00:22,599 alphafold2_multimer_v3_model_1_seed_000 took 541.7s (30 recycles)
2024-07-13 07:00:36,435 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=59 pTM=0.428 ipTM=0.204
2024-07-13 07:00:49,859 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=60.2 pTM=0.423 ipTM=0.19 tol=10.9
2024-07-13 07:01:03,281 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=62.3 pTM=0.424 ipTM=0.183 tol=8.05
2024-07-13 07:01:16,725 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=61.9 pTM=0.427 ipTM=0.188 tol=3.7
2024-07-13 07:01:30,154 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=62.7 pTM=0.432 ipTM=0.229 tol=2.73
2024-07-13 07:01:43,587 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=62.6 pTM=0.431 ipTM=0.226 tol=1.53
2024-07-13 07:01:57,005 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.3 pTM=0.428 ipTM=0.217 tol=2.05
2024-07-13 07:02:10,439 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=62.5 pTM=0.433 ipTM=0.234 tol=1.55
2024-07-13 07:02:23,871 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62.6 pTM=0.43 ipTM=0.218 tol=2.97
2024-07-13 07:02:37,283 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=62.9 pTM=0.435 ipTM=0.238 tol=2.36
2024-07-13 07:02:50,702 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62.9 pTM=0.429 ipTM=0.213 tol=2.69
2024-07-13 07:03:04,110 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=63 pTM=0.438 ipTM=0.234 tol=3.92
2024-07-13 07:03:17,551 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=62.7 pTM=0.431 ipTM=0.227 tol=2.17
2024-07-13 07:03:30,961 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=63.1 pTM=0.435 ipTM=0.231 tol=2.79
2024-07-13 07:03:44,383 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=62.4 pTM=0.429 ipTM=0.223 tol=1.12
2024-07-13 07:03:57,800 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62.6 pTM=0.435 ipTM=0.223 tol=3.34
2024-07-13 07:04:11,211 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=62.6 pTM=0.428 ipTM=0.228 tol=4.54
2024-07-13 07:04:24,627 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62.7 pTM=0.428 ipTM=0.216 tol=4.86
2024-07-13 07:04:38,042 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=62.3 pTM=0.425 ipTM=0.227 tol=0.966
2024-07-13 07:04:51,448 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62.7 pTM=0.431 ipTM=0.212 tol=3.32
2024-07-13 07:05:04,877 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62.7 pTM=0.427 ipTM=0.238 tol=2.38
2024-07-13 07:05:18,292 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=63.1 pTM=0.432 ipTM=0.214 tol=3.67
2024-07-13 07:05:31,706 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62.6 pTM=0.427 ipTM=0.218 tol=3.33
2024-07-13 07:05:45,120 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.7 pTM=0.427 ipTM=0.216 tol=1.25
2024-07-13 07:05:58,533 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=62.6 pTM=0.427 ipTM=0.225 tol=2.55
2024-07-13 07:06:11,953 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=62.7 pTM=0.431 ipTM=0.229 tol=1.84
2024-07-13 07:06:25,364 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=62.5 pTM=0.429 ipTM=0.213 tol=3.17
2024-07-13 07:06:38,779 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.8 pTM=0.433 ipTM=0.239 tol=1.94
2024-07-13 07:06:52,202 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62.4 pTM=0.428 ipTM=0.215 tol=1.31
2024-07-13 07:07:05,611 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=62.5 pTM=0.431 ipTM=0.226 tol=2.41
2024-07-13 07:07:19,033 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=62.2 pTM=0.423 ipTM=0.216 tol=1.69
2024-07-13 07:07:19,034 alphafold2_multimer_v3_model_2_seed_000 took 416.0s (30 recycles)
2024-07-13 07:07:32,852 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=58.1 pTM=0.416 ipTM=0.203
2024-07-13 07:07:46,271 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=59.1 pTM=0.417 ipTM=0.193 tol=10.9
2024-07-13 07:07:59,699 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=60 pTM=0.417 ipTM=0.179 tol=4.71
2024-07-13 07:08:13,128 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=59.3 pTM=0.421 ipTM=0.193 tol=5.95
2024-07-13 07:08:26,553 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59.8 pTM=0.422 ipTM=0.207 tol=3.74
2024-07-13 07:08:39,971 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=60.6 pTM=0.422 ipTM=0.205 tol=1.89
2024-07-13 07:08:53,392 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=61 pTM=0.421 ipTM=0.224 tol=2.17
2024-07-13 07:09:06,829 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=60.6 pTM=0.421 ipTM=0.225 tol=2.8
2024-07-13 07:09:20,265 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61.2 pTM=0.42 ipTM=0.225 tol=3.76
2024-07-13 07:09:33,701 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=61.4 pTM=0.42 ipTM=0.235 tol=1.82
2024-07-13 07:09:47,144 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=61.5 pTM=0.42 ipTM=0.223 tol=1.92
2024-07-13 07:10:00,566 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=61.6 pTM=0.42 ipTM=0.225 tol=1.8
2024-07-13 07:10:13,977 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=61.1 pTM=0.416 ipTM=0.221 tol=1.37
2024-07-13 07:10:27,392 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=61.2 pTM=0.418 ipTM=0.225 tol=1.35
2024-07-13 07:10:40,815 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=61.3 pTM=0.416 ipTM=0.223 tol=1.07
2024-07-13 07:10:54,225 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=61.3 pTM=0.419 ipTM=0.226 tol=1.3
2024-07-13 07:11:07,634 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=61.2 pTM=0.416 ipTM=0.226 tol=1.55
2024-07-13 07:11:21,044 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.1 pTM=0.418 ipTM=0.217 tol=1.83
2024-07-13 07:11:34,440 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.2 pTM=0.418 ipTM=0.224 tol=1.49
2024-07-13 07:11:47,838 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61 pTM=0.418 ipTM=0.22 tol=0.64
2024-07-13 07:12:01,235 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=61.2 pTM=0.418 ipTM=0.22 tol=0.781
2024-07-13 07:12:14,634 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=61.2 pTM=0.42 ipTM=0.224 tol=0.721
2024-07-13 07:12:28,028 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61.1 pTM=0.417 ipTM=0.214 tol=1.07
2024-07-13 07:12:41,437 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=60.8 pTM=0.414 ipTM=0.218 tol=1.01
2024-07-13 07:12:54,839 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.1 pTM=0.417 ipTM=0.222 tol=0.915
2024-07-13 07:13:08,251 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=60.7 pTM=0.415 ipTM=0.218 tol=0.645
2024-07-13 07:13:21,653 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=60.8 pTM=0.415 ipTM=0.211 tol=0.833
2024-07-13 07:13:35,070 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=60.7 pTM=0.415 ipTM=0.226 tol=0.861
2024-07-13 07:13:48,481 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=60.7 pTM=0.413 ipTM=0.214 tol=0.729
2024-07-13 07:14:01,902 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=60.7 pTM=0.412 ipTM=0.229 tol=0.684
2024-07-13 07:14:15,312 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.8 pTM=0.412 ipTM=0.212 tol=1.2
2024-07-13 07:14:15,312 alphafold2_multimer_v3_model_3_seed_000 took 415.9s (30 recycles)
2024-07-13 07:14:29,137 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=57.6 pTM=0.446 ipTM=0.254
2024-07-13 07:14:42,558 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=59.2 pTM=0.445 ipTM=0.215 tol=11.4
2024-07-13 07:14:55,975 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=60.5 pTM=0.438 ipTM=0.194 tol=5.95
2024-07-13 07:15:09,396 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=60.4 pTM=0.433 ipTM=0.19 tol=5.67
2024-07-13 07:15:22,840 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=59.7 pTM=0.43 ipTM=0.19 tol=5.11
2024-07-13 07:15:36,269 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=60.3 pTM=0.431 ipTM=0.19 tol=2.92
2024-07-13 07:15:49,687 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=60.5 pTM=0.429 ipTM=0.191 tol=1.69
2024-07-13 07:16:03,106 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=60.4 pTM=0.429 ipTM=0.184 tol=2.26
2024-07-13 07:16:16,536 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=60.5 pTM=0.427 ipTM=0.184 tol=2.38
2024-07-13 07:16:29,970 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=60.6 pTM=0.427 ipTM=0.182 tol=4.91
2024-07-13 07:16:43,388 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=60.8 pTM=0.425 ipTM=0.181 tol=3.75
2024-07-13 07:16:56,805 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=61.2 pTM=0.427 ipTM=0.178 tol=3.27
2024-07-13 07:17:10,218 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=60.7 pTM=0.424 ipTM=0.176 tol=3.72
2024-07-13 07:17:23,640 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=60.5 pTM=0.425 ipTM=0.181 tol=2.74
2024-07-13 07:17:37,058 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=60.8 pTM=0.427 ipTM=0.183 tol=1.71
2024-07-13 07:17:50,490 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=61.1 pTM=0.428 ipTM=0.183 tol=1.38
2024-07-13 07:18:03,902 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=60.8 pTM=0.427 ipTM=0.184 tol=1.65
2024-07-13 07:18:17,322 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=60.9 pTM=0.426 ipTM=0.181 tol=1.7
2024-07-13 07:18:30,726 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=60.4 pTM=0.424 ipTM=0.181 tol=1.62
2024-07-13 07:18:44,146 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=60.4 pTM=0.421 ipTM=0.178 tol=2.09
2024-07-13 07:18:57,553 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=60.8 pTM=0.423 ipTM=0.177 tol=1.57
2024-07-13 07:19:10,983 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=60.8 pTM=0.423 ipTM=0.177 tol=2.51
2024-07-13 07:19:24,397 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=60.9 pTM=0.426 ipTM=0.177 tol=2.1
2024-07-13 07:19:37,808 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=60.8 pTM=0.423 ipTM=0.178 tol=1.51
2024-07-13 07:19:51,229 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=60.8 pTM=0.426 ipTM=0.179 tol=2.43
2024-07-13 07:20:04,636 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60.7 pTM=0.423 ipTM=0.178 tol=1.41
2024-07-13 07:20:18,076 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=60.8 pTM=0.424 ipTM=0.179 tol=2.16
2024-07-13 07:20:31,512 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=60.6 pTM=0.421 ipTM=0.178 tol=1.78
2024-07-13 07:20:44,947 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=60.8 pTM=0.423 ipTM=0.177 tol=1.63
2024-07-13 07:20:58,379 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=60.8 pTM=0.42 ipTM=0.176 tol=1.54
2024-07-13 07:21:11,807 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=60.7 pTM=0.421 ipTM=0.174 tol=2.88
2024-07-13 07:21:11,808 alphafold2_multimer_v3_model_4_seed_000 took 416.1s (30 recycles)
2024-07-13 07:21:25,665 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=56.8 pTM=0.422 ipTM=0.217
2024-07-13 07:21:39,107 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=59.8 pTM=0.441 ipTM=0.232 tol=7
2024-07-13 07:21:52,537 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=60.9 pTM=0.432 ipTM=0.206 tol=3.53
2024-07-13 07:22:05,969 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=60.3 pTM=0.424 ipTM=0.202 tol=1.81
2024-07-13 07:22:19,388 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=60.5 pTM=0.423 ipTM=0.199 tol=2.06
2024-07-13 07:22:32,830 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=60.4 pTM=0.421 ipTM=0.196 tol=2.02
2024-07-13 07:22:46,249 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=60.3 pTM=0.422 ipTM=0.204 tol=2.1
2024-07-13 07:22:59,675 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=60.1 pTM=0.417 ipTM=0.192 tol=1.86
2024-07-13 07:23:13,104 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=60.5 pTM=0.419 ipTM=0.202 tol=1.78
2024-07-13 07:23:26,546 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=60.6 pTM=0.416 ipTM=0.188 tol=1.79
2024-07-13 07:23:39,983 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=60.2 pTM=0.413 ipTM=0.192 tol=1.94
2024-07-13 07:23:53,418 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=60.6 pTM=0.416 ipTM=0.189 tol=2.04
2024-07-13 07:24:06,852 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=60.1 pTM=0.411 ipTM=0.188 tol=1.75
2024-07-13 07:24:20,296 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=60.4 pTM=0.412 ipTM=0.192 tol=1.82
2024-07-13 07:24:33,723 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=60.1 pTM=0.413 ipTM=0.191 tol=1.65
2024-07-13 07:24:47,154 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=60.4 pTM=0.413 ipTM=0.184 tol=1.81
2024-07-13 07:25:00,583 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=59.9 pTM=0.415 ipTM=0.2 tol=1.74
2024-07-13 07:25:14,010 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=60.1 pTM=0.412 ipTM=0.186 tol=1.68
2024-07-13 07:25:27,461 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=59.7 pTM=0.413 ipTM=0.193 tol=1.81
2024-07-13 07:25:40,905 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=60 pTM=0.412 ipTM=0.19 tol=1.4
2024-07-13 07:25:54,358 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=60.2 pTM=0.412 ipTM=0.191 tol=1.62
2024-07-13 07:26:07,820 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=60.3 pTM=0.411 ipTM=0.189 tol=1.97
2024-07-13 07:26:21,273 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=59.9 pTM=0.409 ipTM=0.187 tol=1.83
2024-07-13 07:26:34,730 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=60 pTM=0.406 ipTM=0.188 tol=1.27
2024-07-13 07:26:48,182 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=59.7 pTM=0.409 ipTM=0.184 tol=1.12
2024-07-13 07:27:01,655 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=59.6 pTM=0.406 ipTM=0.185 tol=1.73
2024-07-13 07:27:15,114 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=59.4 pTM=0.405 ipTM=0.184 tol=1.69
2024-07-13 07:27:28,582 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=59.7 pTM=0.404 ipTM=0.18 tol=1.67
2024-07-13 07:27:42,026 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=59.3 pTM=0.401 ipTM=0.182 tol=1.37
2024-07-13 07:27:55,499 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=59.6 pTM=0.404 ipTM=0.186 tol=1.76
2024-07-13 07:28:08,968 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=59.4 pTM=0.401 ipTM=0.186 tol=1.59
2024-07-13 07:28:08,969 alphafold2_multimer_v3_model_5_seed_000 took 416.7s (30 recycles)
2024-07-13 07:28:09,386 reranking models by 'multimer' metric
2024-07-13 07:28:29,265 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-13 07:29:15,099 Relaxation took 65.7s
2024-07-13 07:29:15,099 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=62.2 pTM=0.423 ipTM=0.216
2024-07-13 07:30:19,321 Relaxation took 64.2s
2024-07-13 07:30:19,322 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.8 pTM=0.412 ipTM=0.212
2024-07-13 07:31:21,279 Relaxation took 62.0s
2024-07-13 07:31:21,280 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=59.6 pTM=0.427 ipTM=0.201
2024-07-13 07:32:23,091 Relaxation took 61.8s
2024-07-13 07:32:23,091 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=59.4 pTM=0.401 ipTM=0.186
2024-07-13 07:33:13,775 Relaxation took 50.7s
2024-07-13 07:33:13,775 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=60.7 pTM=0.421 ipTM=0.174
2024-07-13 07:33:16,810 Done