2024-07-13 06:54:55,099 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 06:54:55,423 Running on GPU
2024-07-13 06:55:13,947 Found 6 citations for tools or databases
2024-07-13 06:55:13,947 Query 1/1: ST18_TMED9 (length 1282)
2024-07-13 06:55:14,422 Sleeping for 5s. Reason: PENDING
2024-07-13 06:55:19,848 Sleeping for 5s. Reason: RUNNING
2024-07-13 06:55:25,264 Sleeping for 5s. Reason: RUNNING
2024-07-13 06:55:30,689 Sleeping for 5s. Reason: RUNNING
2024-07-13 06:55:36,104 Sleeping for 6s. Reason: RUNNING
2024-07-13 06:55:42,521 Sleeping for 9s. Reason: RUNNING
2024-07-13 06:55:51,956 Sleeping for 10s. Reason: RUNNING
2024-07-13 06:56:02,375 Sleeping for 5s. Reason: RUNNING
2024-07-13 06:56:07,796 Sleeping for 5s. Reason: RUNNING
2024-07-13 06:56:13,201 Sleeping for 7s. Reason: RUNNING
2024-07-13 06:56:22,202 Sleeping for 9s. Reason: PENDING
2024-07-13 06:56:31,620 Sleeping for 6s. Reason: RUNNING
2024-07-13 06:56:38,048 Sleeping for 8s. Reason: RUNNING
2024-07-13 06:56:46,477 Sleeping for 8s. Reason: RUNNING
2024-07-13 06:56:54,893 Sleeping for 5s. Reason: RUNNING
2024-07-13 06:57:04,467 Setting max_seq=508, max_extra_seq=2048
2024-07-13 07:01:14,785 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=35.7 pTM=0.256 ipTM=0.369
2024-07-13 07:01:57,255 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=37.4 pTM=0.252 ipTM=0.37 tol=21.2
2024-07-13 07:02:39,912 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=37.3 pTM=0.251 ipTM=0.318 tol=17.2
2024-07-13 07:03:22,666 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=36.8 pTM=0.248 ipTM=0.264 tol=11.7
2024-07-13 07:04:05,456 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=36.9 pTM=0.25 ipTM=0.341 tol=9.3
2024-07-13 07:04:48,272 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=36.5 pTM=0.249 ipTM=0.25 tol=9.38
2024-07-13 07:05:31,122 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=36.9 pTM=0.247 ipTM=0.238 tol=10
2024-07-13 07:06:13,918 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=36.8 pTM=0.248 ipTM=0.268 tol=12.4
2024-07-13 07:06:56,715 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=37.3 pTM=0.247 ipTM=0.229 tol=7.46
2024-07-13 07:07:39,511 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=37.8 pTM=0.248 ipTM=0.244 tol=8.35
2024-07-13 07:08:22,323 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=38 pTM=0.248 ipTM=0.228 tol=7.28
2024-07-13 07:09:05,175 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=37.9 pTM=0.248 ipTM=0.25 tol=4.81
2024-07-13 07:09:48,009 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=38 pTM=0.249 ipTM=0.241 tol=6.57
2024-07-13 07:10:30,856 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=38.3 pTM=0.248 ipTM=0.263 tol=6.08
2024-07-13 07:11:13,684 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=38 pTM=0.248 ipTM=0.228 tol=4.5
2024-07-13 07:11:56,469 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=36.9 pTM=0.249 ipTM=0.253 tol=27.9
2024-07-13 07:12:39,321 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=37.6 pTM=0.246 ipTM=0.19 tol=24.2
2024-07-13 07:13:22,159 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=37.8 pTM=0.246 ipTM=0.176 tol=10.3
2024-07-13 07:14:04,977 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=37.9 pTM=0.246 ipTM=0.177 tol=7
2024-07-13 07:14:47,798 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=37.8 pTM=0.246 ipTM=0.179 tol=6.89
2024-07-13 07:15:30,597 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=38 pTM=0.247 ipTM=0.18 tol=5.05
2024-07-13 07:16:13,400 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=38 pTM=0.246 ipTM=0.178 tol=6.22
2024-07-13 07:16:56,175 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=38.2 pTM=0.245 ipTM=0.18 tol=5.82
2024-07-13 07:17:38,989 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=37.9 pTM=0.245 ipTM=0.18 tol=3.65
2024-07-13 07:18:21,776 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=38.1 pTM=0.245 ipTM=0.181 tol=12.2
2024-07-13 07:19:04,581 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=38 pTM=0.246 ipTM=0.181 tol=9.85
2024-07-13 07:19:47,404 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=37.9 pTM=0.247 ipTM=0.181 tol=4.64
2024-07-13 07:20:30,219 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=37.9 pTM=0.246 ipTM=0.18 tol=4.69
2024-07-13 07:21:13,099 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=37.7 pTM=0.246 ipTM=0.181 tol=5.98
2024-07-13 07:21:55,929 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=38 pTM=0.247 ipTM=0.182 tol=6.13
2024-07-13 07:22:38,763 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=37.9 pTM=0.247 ipTM=0.184 tol=6.78
2024-07-13 07:22:38,764 alphafold2_multimer_v3_model_1_seed_000 took 1471.4s (30 recycles)
2024-07-13 07:23:22,423 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=37.4 pTM=0.251 ipTM=0.159
2024-07-13 07:24:05,233 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=39.3 pTM=0.256 ipTM=0.168 tol=22.7
2024-07-13 07:24:48,043 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=39.3 pTM=0.254 ipTM=0.174 tol=14.5
2024-07-13 07:25:30,867 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=38.9 pTM=0.258 ipTM=0.245 tol=17.2
2024-07-13 07:26:13,684 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=38.9 pTM=0.26 ipTM=0.221 tol=12.3
2024-07-13 07:26:56,520 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=39.5 pTM=0.268 ipTM=0.244 tol=8.23
2024-07-13 07:27:39,358 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=39.9 pTM=0.271 ipTM=0.271 tol=5.88
2024-07-13 07:28:22,222 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=39.9 pTM=0.272 ipTM=0.278 tol=5.06
2024-07-13 07:29:05,081 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=39.9 pTM=0.27 ipTM=0.275 tol=6.1
2024-07-13 07:29:47,901 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=39.9 pTM=0.272 ipTM=0.28 tol=6.61
2024-07-13 07:30:30,703 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=39.7 pTM=0.271 ipTM=0.275 tol=5.35
2024-07-13 07:31:13,487 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=39.9 pTM=0.271 ipTM=0.278 tol=5.62
2024-07-13 07:31:56,255 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=40.1 pTM=0.273 ipTM=0.281 tol=5.95
2024-07-13 07:32:39,014 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=40.3 pTM=0.273 ipTM=0.292 tol=5.91
2024-07-13 07:33:21,787 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=40.1 pTM=0.272 ipTM=0.281 tol=6.78
2024-07-13 07:34:04,553 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=40.2 pTM=0.272 ipTM=0.281 tol=6.62
2024-07-13 07:34:47,340 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=40.1 pTM=0.273 ipTM=0.275 tol=6.2
2024-07-13 07:35:30,153 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=40.2 pTM=0.273 ipTM=0.279 tol=5.08
2024-07-13 07:36:12,897 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=40 pTM=0.272 ipTM=0.27 tol=5.95
2024-07-13 07:36:55,640 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=40 pTM=0.271 ipTM=0.271 tol=5.71
2024-07-13 07:37:38,364 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=40.1 pTM=0.271 ipTM=0.269 tol=5.52
2024-07-13 07:38:21,082 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=40.2 pTM=0.273 ipTM=0.268 tol=5.23
2024-07-13 07:39:03,794 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=40.2 pTM=0.27 ipTM=0.264 tol=3.48
2024-07-13 07:39:46,505 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=40.2 pTM=0.273 ipTM=0.272 tol=3.66
2024-07-13 07:40:29,215 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=40.3 pTM=0.272 ipTM=0.273 tol=3.66
2024-07-13 07:41:11,955 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=40 pTM=0.272 ipTM=0.275 tol=3.75
2024-07-13 07:41:54,664 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=40.2 pTM=0.275 ipTM=0.278 tol=3.74
2024-07-13 07:42:37,408 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=40.1 pTM=0.27 ipTM=0.274 tol=4.9
2024-07-13 07:43:20,128 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=39.9 pTM=0.272 ipTM=0.282 tol=6.16
2024-07-13 07:44:02,847 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=40.2 pTM=0.271 ipTM=0.273 tol=5.73
2024-07-13 07:44:45,536 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=40 pTM=0.271 ipTM=0.268 tol=5.58
2024-07-13 07:44:45,538 alphafold2_multimer_v3_model_2_seed_000 took 1325.8s (30 recycles)
2024-07-13 07:45:29,535 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=33 pTM=0.251 ipTM=0.2
2024-07-13 07:46:12,697 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=34.4 pTM=0.258 ipTM=0.171 tol=25.1
2024-07-13 07:46:55,855 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=33.8 pTM=0.261 ipTM=0.206 tol=16
2024-07-13 07:47:39,016 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=33.7 pTM=0.264 ipTM=0.234 tol=12.7
2024-07-13 07:48:22,187 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=33.4 pTM=0.268 ipTM=0.232 tol=8.55
2024-07-13 07:49:05,363 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=33.4 pTM=0.263 ipTM=0.23 tol=11
2024-07-13 07:49:48,573 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=32.9 pTM=0.265 ipTM=0.242 tol=14
2024-07-13 07:50:31,762 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=33.3 pTM=0.263 ipTM=0.249 tol=12.6
2024-07-13 07:51:14,988 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=33.1 pTM=0.269 ipTM=0.26 tol=10.5
2024-07-13 07:51:58,278 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=35.5 pTM=0.311 ipTM=0.672 tol=19
2024-07-13 07:52:41,481 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=35.5 pTM=0.311 ipTM=0.628 tol=8.73
2024-07-13 07:53:24,633 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=35.3 pTM=0.309 ipTM=0.628 tol=6.33
2024-07-13 07:54:07,769 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=35.8 pTM=0.314 ipTM=0.635 tol=6.29
2024-07-13 07:54:50,908 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=35.6 pTM=0.312 ipTM=0.625 tol=6.17
2024-07-13 07:55:34,037 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=35.7 pTM=0.313 ipTM=0.632 tol=5.19
2024-07-13 07:56:17,165 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=35.3 pTM=0.311 ipTM=0.627 tol=4.79
2024-07-13 07:57:00,302 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=35.5 pTM=0.313 ipTM=0.631 tol=11.1
2024-07-13 07:57:43,447 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=35.6 pTM=0.312 ipTM=0.629 tol=9.59
2024-07-13 07:58:26,572 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=35.9 pTM=0.317 ipTM=0.633 tol=4.58
2024-07-13 07:59:09,683 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=35.5 pTM=0.312 ipTM=0.624 tol=6.76
2024-07-13 07:59:52,817 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=36.1 pTM=0.321 ipTM=0.632 tol=5.57
2024-07-13 08:00:35,906 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=36 pTM=0.318 ipTM=0.624 tol=3.94
2024-07-13 08:01:18,984 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=36.3 pTM=0.319 ipTM=0.623 tol=3.24
2024-07-13 08:02:02,048 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=35.7 pTM=0.314 ipTM=0.628 tol=4.21
2024-07-13 08:02:45,092 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=36.2 pTM=0.322 ipTM=0.626 tol=4.43
2024-07-13 08:03:28,140 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=35.9 pTM=0.321 ipTM=0.621 tol=8.27
2024-07-13 08:04:11,170 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=35.8 pTM=0.317 ipTM=0.625 tol=7.05
2024-07-13 08:04:54,165 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=36.1 pTM=0.321 ipTM=0.626 tol=3.22
2024-07-13 08:05:37,230 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=35.8 pTM=0.321 ipTM=0.626 tol=3.59
2024-07-13 08:06:20,291 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=36 pTM=0.322 ipTM=0.622 tol=6.96
2024-07-13 08:07:03,384 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=35.6 pTM=0.315 ipTM=0.617 tol=7.09
2024-07-13 08:07:03,385 alphafold2_multimer_v3_model_3_seed_000 took 1336.8s (30 recycles)
2024-07-13 08:07:47,319 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=33.5 pTM=0.268 ipTM=0.261
2024-07-13 08:08:30,357 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=36.2 pTM=0.252 ipTM=0.189 tol=25.3
2024-07-13 08:09:13,472 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=36 pTM=0.247 ipTM=0.186 tol=15.7
2024-07-13 08:09:56,646 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=35.9 pTM=0.247 ipTM=0.196 tol=10.2
2024-07-13 08:10:39,792 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=35.9 pTM=0.248 ipTM=0.236 tol=8.77
2024-07-13 08:11:22,989 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=35.9 pTM=0.248 ipTM=0.233 tol=9.12
2024-07-13 08:12:06,167 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=36 pTM=0.248 ipTM=0.22 tol=15
2024-07-13 08:12:49,320 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=36.2 pTM=0.25 ipTM=0.26 tol=12.3
2024-07-13 08:13:32,438 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=35.9 pTM=0.247 ipTM=0.228 tol=13.5
2024-07-13 08:14:15,578 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=36.1 pTM=0.247 ipTM=0.201 tol=11.2
2024-07-13 08:14:58,728 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=36 pTM=0.248 ipTM=0.22 tol=7.53
2024-07-13 08:15:41,846 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=36 pTM=0.249 ipTM=0.237 tol=8.01
2024-07-13 08:16:24,961 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=36.3 pTM=0.249 ipTM=0.231 tol=5.65
2024-07-13 08:17:08,093 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=36.3 pTM=0.249 ipTM=0.234 tol=5.45
2024-07-13 08:17:51,247 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=35.9 pTM=0.248 ipTM=0.229 tol=11.7
2024-07-13 08:18:34,349 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=36.2 pTM=0.248 ipTM=0.247 tol=11.5
2024-07-13 08:19:17,444 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=36.1 pTM=0.247 ipTM=0.209 tol=11
2024-07-13 08:20:00,525 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=36.2 pTM=0.25 ipTM=0.255 tol=10.7
2024-07-13 08:20:43,623 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=36.2 pTM=0.249 ipTM=0.212 tol=5.26
2024-07-13 08:21:26,766 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=36.3 pTM=0.247 ipTM=0.196 tol=6.92
2024-07-13 08:22:09,894 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=36.3 pTM=0.25 ipTM=0.222 tol=5.54
2024-07-13 08:22:52,994 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=36.3 pTM=0.248 ipTM=0.243 tol=8.83
2024-07-13 08:23:36,088 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=36.5 pTM=0.249 ipTM=0.231 tol=8.39
2024-07-13 08:24:19,171 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=36.5 pTM=0.249 ipTM=0.24 tol=4.7
2024-07-13 08:25:02,304 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=36.5 pTM=0.249 ipTM=0.24 tol=4.99
2024-07-13 08:25:45,419 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=36.5 pTM=0.25 ipTM=0.24 tol=4.41
2024-07-13 08:26:28,581 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=36.4 pTM=0.25 ipTM=0.224 tol=5.25
2024-07-13 08:27:11,687 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=36.2 pTM=0.25 ipTM=0.231 tol=4.38
2024-07-13 08:27:54,819 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=36.3 pTM=0.249 ipTM=0.217 tol=4.12
2024-07-13 08:28:37,966 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=36.4 pTM=0.25 ipTM=0.22 tol=6.42
2024-07-13 08:29:21,107 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=36.2 pTM=0.25 ipTM=0.248 tol=6.96
2024-07-13 08:29:21,109 alphafold2_multimer_v3_model_4_seed_000 took 1336.7s (30 recycles)
2024-07-13 08:30:05,198 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=33.6 pTM=0.253 ipTM=0.18
2024-07-13 08:30:48,330 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=33.9 pTM=0.252 ipTM=0.201 tol=23.2
2024-07-13 08:31:31,413 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=35.2 pTM=0.254 ipTM=0.191 tol=14.9
2024-07-13 08:32:14,478 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=35.9 pTM=0.255 ipTM=0.218 tol=11.6
2024-07-13 08:32:57,558 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=36.2 pTM=0.262 ipTM=0.253 tol=10
2024-07-13 08:33:40,653 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=36.4 pTM=0.264 ipTM=0.262 tol=12.1
2024-07-13 08:34:23,777 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=36.8 pTM=0.264 ipTM=0.268 tol=11.6
2024-07-13 08:35:06,839 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=36.6 pTM=0.269 ipTM=0.287 tol=6.96
2024-07-13 08:35:49,918 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=36.5 pTM=0.267 ipTM=0.295 tol=10.2
2024-07-13 08:36:33,009 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=36.7 pTM=0.269 ipTM=0.305 tol=9.92
2024-07-13 08:37:16,079 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=36.7 pTM=0.272 ipTM=0.312 tol=8.58
2024-07-13 08:37:59,184 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=36.5 pTM=0.27 ipTM=0.314 tol=8.48
2024-07-13 08:38:42,325 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=36.7 pTM=0.27 ipTM=0.307 tol=7.4
2024-07-13 08:39:25,460 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=37 pTM=0.27 ipTM=0.314 tol=7.55
2024-07-13 08:40:08,603 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=36.7 pTM=0.271 ipTM=0.318 tol=6.42
2024-07-13 08:40:51,704 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=36.8 pTM=0.271 ipTM=0.32 tol=6.85
2024-07-13 08:41:34,796 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=36.7 pTM=0.269 ipTM=0.302 tol=4.89
2024-07-13 08:42:17,880 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=36.7 pTM=0.27 ipTM=0.303 tol=4.75
2024-07-13 08:43:00,980 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=36.5 pTM=0.27 ipTM=0.305 tol=6.57
2024-07-13 08:43:44,071 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=36.7 pTM=0.268 ipTM=0.302 tol=6.6
2024-07-13 08:44:27,148 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=36.8 pTM=0.269 ipTM=0.299 tol=5.89
2024-07-13 08:45:10,233 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=36.8 pTM=0.269 ipTM=0.303 tol=6.54
2024-07-13 08:45:53,318 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=37.1 pTM=0.27 ipTM=0.311 tol=7
2024-07-13 08:46:36,400 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=36.8 pTM=0.271 ipTM=0.31 tol=5.69
2024-07-13 08:47:19,436 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=36.9 pTM=0.272 ipTM=0.325 tol=6.02
2024-07-13 08:48:02,498 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=36.6 pTM=0.272 ipTM=0.323 tol=3.92
2024-07-13 08:48:45,536 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=36.8 pTM=0.271 ipTM=0.314 tol=7.65
2024-07-13 08:49:28,593 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=36.5 pTM=0.272 ipTM=0.327 tol=4.81
2024-07-13 08:50:11,655 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=36.3 pTM=0.272 ipTM=0.332 tol=8.77
2024-07-13 08:50:54,764 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=36.6 pTM=0.272 ipTM=0.326 tol=4.98
2024-07-13 08:51:37,884 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=36.5 pTM=0.27 ipTM=0.316 tol=3.87
2024-07-13 08:51:37,886 alphafold2_multimer_v3_model_5_seed_000 took 1335.8s (30 recycles)
2024-07-13 08:51:38,881 reranking models by 'multimer' metric
2024-07-13 08:52:05,260 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-13 08:55:20,779 Relaxation took 221.9s
2024-07-13 08:55:20,780 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=35.6 pTM=0.315 ipTM=0.617
2024-07-13 08:58:24,468 Relaxation took 183.7s
2024-07-13 08:58:24,468 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=36.5 pTM=0.27 ipTM=0.316
2024-07-13 09:00:33,093 Relaxation took 128.6s
2024-07-13 09:00:33,093 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=40 pTM=0.271 ipTM=0.268
2024-07-13 09:02:28,401 Relaxation took 115.3s
2024-07-13 09:02:28,401 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=36.2 pTM=0.25 ipTM=0.248
2024-07-13 09:05:32,399 Relaxation took 184.0s
2024-07-13 09:05:32,399 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=37.9 pTM=0.247 ipTM=0.184
2024-07-13 09:05:39,441 Done