2024-07-13 09:08:01,157 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-13 09:08:05,239 Running on GPU 2024-07-13 09:08:23,477 Found 6 citations for tools or databases 2024-07-13 09:08:23,477 Query 1/1: SYCP1_F168A (length 1220) 2024-07-13 09:08:23,931 Sleeping for 7s. Reason: PENDING 2024-07-13 09:08:31,371 Sleeping for 8s. Reason: RUNNING 2024-07-13 09:08:39,788 Sleeping for 9s. Reason: RUNNING 2024-07-13 09:08:49,218 Sleeping for 5s. Reason: RUNNING 2024-07-13 09:08:54,649 Sleeping for 10s. Reason: RUNNING 2024-07-13 09:09:05,080 Sleeping for 6s. Reason: RUNNING 2024-07-13 09:09:12,713 Sleeping for 10s. Reason: PENDING 2024-07-13 09:09:23,145 Sleeping for 6s. Reason: RUNNING 2024-07-13 09:09:29,569 Sleeping for 7s. Reason: RUNNING 2024-07-13 09:09:41,037 Setting max_seq=508, max_extra_seq=1158 2024-07-13 09:14:32,229 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=46.4 pTM=0.198 ipTM=0.127 2024-07-13 09:15:10,924 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=45.4 pTM=0.206 ipTM=0.126 tol=72.8 2024-07-13 09:15:49,784 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=44.4 pTM=0.207 ipTM=0.126 tol=31 2024-07-13 09:16:28,731 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=42.8 pTM=0.201 ipTM=0.127 tol=24.4 2024-07-13 09:17:07,725 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=43.5 pTM=0.202 ipTM=0.125 tol=13 2024-07-13 09:17:46,726 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=44.2 pTM=0.203 ipTM=0.124 tol=10.6 2024-07-13 09:18:25,721 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=43.6 pTM=0.2 ipTM=0.125 tol=13.7 2024-07-13 09:19:04,706 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=43.7 pTM=0.201 ipTM=0.125 tol=11.3 2024-07-13 09:19:43,682 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=43.8 pTM=0.205 ipTM=0.129 tol=11 2024-07-13 09:20:22,644 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=43.8 pTM=0.204 ipTM=0.123 tol=14.2 2024-07-13 09:21:01,592 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=43.8 pTM=0.202 ipTM=0.125 tol=11 2024-07-13 09:21:40,532 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=43.9 pTM=0.204 ipTM=0.126 tol=6.64 2024-07-13 09:22:19,524 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=43 pTM=0.201 ipTM=0.126 tol=10.3 2024-07-13 09:22:58,487 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=43.6 pTM=0.204 ipTM=0.126 tol=10.3 2024-07-13 09:23:37,487 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=43.3 pTM=0.201 ipTM=0.128 tol=11.3 2024-07-13 09:24:16,516 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=43.4 pTM=0.202 ipTM=0.131 tol=12.3 2024-07-13 09:24:55,526 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=44.4 pTM=0.203 ipTM=0.128 tol=6.76 2024-07-13 09:25:34,527 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=44.2 pTM=0.203 ipTM=0.127 tol=5.43 2024-07-13 09:26:13,507 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=44.5 pTM=0.203 ipTM=0.13 tol=11.6 2024-07-13 09:26:52,521 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=44 pTM=0.201 ipTM=0.129 tol=10.5 2024-07-13 09:27:31,545 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=43.3 pTM=0.201 ipTM=0.126 tol=8.41 2024-07-13 09:28:10,527 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=44.1 pTM=0.203 ipTM=0.127 tol=11.3 2024-07-13 09:28:49,530 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=43.6 pTM=0.204 ipTM=0.132 tol=11.8 2024-07-13 09:29:28,575 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=43 pTM=0.201 ipTM=0.125 tol=5.97 2024-07-13 09:30:07,578 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=43.6 pTM=0.202 ipTM=0.125 tol=6.69 2024-07-13 09:30:46,568 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=43.4 pTM=0.205 ipTM=0.125 tol=8.66 2024-07-13 09:31:25,522 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=43.5 pTM=0.204 ipTM=0.127 tol=7.16 2024-07-13 09:32:04,477 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=43.9 pTM=0.205 ipTM=0.125 tol=10.4 2024-07-13 09:32:43,415 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=43.4 pTM=0.203 ipTM=0.124 tol=10.1 2024-07-13 09:33:22,303 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=44.2 pTM=0.207 ipTM=0.128 tol=6.74 2024-07-13 09:34:01,236 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=43.4 pTM=0.205 ipTM=0.125 tol=6.46 2024-07-13 09:34:01,237 alphafold2_multimer_v3_model_1_seed_000 took 1397.8s (30 recycles) 2024-07-13 09:34:41,389 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=44.6 pTM=0.207 ipTM=0.148 2024-07-13 09:35:20,243 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=45.7 pTM=0.198 ipTM=0.134 tol=69.5 2024-07-13 09:35:59,169 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=45 pTM=0.199 ipTM=0.134 tol=26.1 2024-07-13 09:36:38,170 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=44.7 pTM=0.2 ipTM=0.139 tol=41.8 2024-07-13 09:37:17,008 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=45.5 pTM=0.206 ipTM=0.15 tol=18.8 2024-07-13 09:37:55,839 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=45.4 pTM=0.2 ipTM=0.146 tol=15.7 2024-07-13 09:38:34,709 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=45.6 pTM=0.202 ipTM=0.148 tol=9.6 2024-07-13 09:39:13,645 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=45.5 pTM=0.201 ipTM=0.141 tol=10.2 2024-07-13 09:39:52,555 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=42.9 pTM=0.196 ipTM=0.137 tol=19.1 2024-07-13 09:40:31,525 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=44.9 pTM=0.201 ipTM=0.141 tol=23.2 2024-07-13 09:41:10,487 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=46.3 pTM=0.2 ipTM=0.144 tol=8.93 2024-07-13 09:41:49,455 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=46.3 pTM=0.201 ipTM=0.143 tol=12.3 2024-07-13 09:42:28,437 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=46 pTM=0.2 ipTM=0.144 tol=9.6 2024-07-13 09:43:07,352 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=45.2 pTM=0.202 ipTM=0.145 tol=24.1 2024-07-13 09:43:46,270 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=44.1 pTM=0.199 ipTM=0.143 tol=12.4 2024-07-13 09:44:25,247 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=44.3 pTM=0.197 ipTM=0.139 tol=15.8 2024-07-13 09:45:04,180 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=43.6 pTM=0.198 ipTM=0.138 tol=23.4 2024-07-13 09:45:43,093 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=44.8 pTM=0.201 ipTM=0.141 tol=12.6 2024-07-13 09:46:21,979 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=43.9 pTM=0.202 ipTM=0.142 tol=11.8 2024-07-13 09:47:00,889 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=44.8 pTM=0.201 ipTM=0.141 tol=11.5 2024-07-13 09:47:39,804 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=43.5 pTM=0.201 ipTM=0.142 tol=14.5 2024-07-13 09:48:18,730 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=44.2 pTM=0.202 ipTM=0.139 tol=13.6 2024-07-13 09:48:57,664 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=44.5 pTM=0.2 ipTM=0.141 tol=10.1 2024-07-13 09:49:36,629 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=45.9 pTM=0.201 ipTM=0.139 tol=12 2024-07-13 09:50:15,534 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=42.2 pTM=0.198 ipTM=0.14 tol=25.8 2024-07-13 09:50:54,421 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=44.2 pTM=0.199 ipTM=0.14 tol=17.5 2024-07-13 09:51:33,275 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=43 pTM=0.196 ipTM=0.145 tol=18.6 2024-07-13 09:52:12,234 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=44.8 pTM=0.198 ipTM=0.138 tol=27.6 2024-07-13 09:52:51,194 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=46.2 pTM=0.201 ipTM=0.143 tol=10.7 2024-07-13 09:53:30,138 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=43.9 pTM=0.197 ipTM=0.136 tol=16.9 2024-07-13 09:54:09,135 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=44.2 pTM=0.198 ipTM=0.137 tol=15.8 2024-07-13 09:54:09,136 alphafold2_multimer_v3_model_2_seed_000 took 1206.6s (30 recycles) 2024-07-13 09:54:49,763 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=37.1 pTM=0.179 ipTM=0.128 2024-07-13 09:55:28,961 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=39.8 pTM=0.203 ipTM=0.125 tol=34 2024-07-13 09:56:07,939 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=45.8 pTM=0.288 ipTM=0.127 tol=24.5 2024-07-13 09:56:46,871 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=46.4 pTM=0.285 ipTM=0.131 tol=12.5 2024-07-13 09:57:25,844 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=45.3 pTM=0.282 ipTM=0.13 tol=11.6 2024-07-13 09:58:04,847 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=43.2 pTM=0.268 ipTM=0.13 tol=11.7 2024-07-13 09:58:43,843 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=43.5 pTM=0.269 ipTM=0.131 tol=10.7 2024-07-13 09:59:22,939 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=40.2 pTM=0.229 ipTM=0.128 tol=14 2024-07-13 10:00:02,004 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=41.9 pTM=0.249 ipTM=0.131 tol=8.65 2024-07-13 10:00:41,042 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=41.9 pTM=0.248 ipTM=0.131 tol=11.7 2024-07-13 10:01:20,098 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=41.6 pTM=0.242 ipTM=0.131 tol=10.8 2024-07-13 10:01:59,223 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=39.7 pTM=0.221 ipTM=0.131 tol=10.7 2024-07-13 10:02:38,261 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=41.5 pTM=0.245 ipTM=0.134 tol=7.78 2024-07-13 10:03:17,247 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=43.7 pTM=0.266 ipTM=0.136 tol=6.31 2024-07-13 10:03:56,217 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=42 pTM=0.252 ipTM=0.137 tol=10 2024-07-13 10:04:35,228 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=41.3 pTM=0.245 ipTM=0.137 tol=11.1 2024-07-13 10:05:14,264 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=41.1 pTM=0.235 ipTM=0.137 tol=5.01 2024-07-13 10:05:53,266 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=42.2 pTM=0.245 ipTM=0.135 tol=6.68 2024-07-13 10:06:32,315 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=41.1 pTM=0.238 ipTM=0.135 tol=4.97 2024-07-13 10:07:11,315 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=45.1 pTM=0.28 ipTM=0.136 tol=18.3 2024-07-13 10:07:50,281 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=44.8 pTM=0.269 ipTM=0.138 tol=16 2024-07-13 10:08:29,346 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=42.2 pTM=0.255 ipTM=0.128 tol=18.4 2024-07-13 10:09:08,341 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=45.3 pTM=0.278 ipTM=0.132 tol=19.5 2024-07-13 10:09:47,391 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=44 pTM=0.275 ipTM=0.138 tol=10 2024-07-13 10:10:26,488 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=40.4 pTM=0.243 ipTM=0.139 tol=16.1 2024-07-13 10:11:05,681 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=39.1 pTM=0.226 ipTM=0.133 tol=13.7 2024-07-13 10:11:44,756 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=42.7 pTM=0.258 ipTM=0.139 tol=25.5 2024-07-13 10:12:23,954 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=39.7 pTM=0.224 ipTM=0.133 tol=24.2 2024-07-13 10:13:03,094 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=41.7 pTM=0.232 ipTM=0.138 tol=20.2 2024-07-13 10:13:42,320 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=39.9 pTM=0.221 ipTM=0.132 tol=18.3 2024-07-13 10:14:21,463 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=41.4 pTM=0.227 ipTM=0.139 tol=15.2 2024-07-13 10:14:21,464 alphafold2_multimer_v3_model_3_seed_000 took 1211.0s (30 recycles) 2024-07-13 10:15:02,099 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=40.8 pTM=0.181 ipTM=0.12 2024-07-13 10:15:41,458 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=40.5 pTM=0.18 ipTM=0.122 tol=24.1 2024-07-13 10:16:20,900 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=38.9 pTM=0.174 ipTM=0.125 tol=46 2024-07-13 10:17:00,352 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=39.1 pTM=0.169 ipTM=0.125 tol=33.4 2024-07-13 10:17:39,804 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=38.4 pTM=0.175 ipTM=0.124 tol=19.9 2024-07-13 10:18:19,277 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=37.6 pTM=0.172 ipTM=0.124 tol=27.4 2024-07-13 10:18:58,613 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=40 pTM=0.203 ipTM=0.124 tol=35.9 2024-07-13 10:19:37,863 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=39.7 pTM=0.216 ipTM=0.128 tol=27.6 2024-07-13 10:20:17,068 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=39.7 pTM=0.245 ipTM=0.131 tol=50.2 2024-07-13 10:20:56,148 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=41.3 pTM=0.253 ipTM=0.131 tol=33 2024-07-13 10:21:35,425 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=39.2 pTM=0.236 ipTM=0.13 tol=27.2 2024-07-13 10:22:14,645 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=37.5 pTM=0.233 ipTM=0.125 tol=25.4 2024-07-13 10:22:53,810 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=37.8 pTM=0.205 ipTM=0.13 tol=25.6 2024-07-13 10:23:33,025 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=36.1 pTM=0.213 ipTM=0.13 tol=29.6 2024-07-13 10:24:12,008 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=42.1 pTM=0.273 ipTM=0.148 tol=19.6 2024-07-13 10:24:51,144 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=37.6 pTM=0.24 ipTM=0.152 tol=55.3 2024-07-13 10:25:30,169 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=40.4 pTM=0.258 ipTM=0.158 tol=55.1 2024-07-13 10:26:09,306 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=36.8 pTM=0.232 ipTM=0.15 tol=24.6 2024-07-13 10:26:48,370 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=40.1 pTM=0.252 ipTM=0.135 tol=38.7 2024-07-13 10:27:27,355 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=41.1 pTM=0.253 ipTM=0.129 tol=37.8 2024-07-13 10:28:06,285 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=41.6 pTM=0.271 ipTM=0.138 tol=25.8 2024-07-13 10:28:45,412 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=37.6 pTM=0.234 ipTM=0.135 tol=19.8 2024-07-13 10:29:24,444 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=40.4 pTM=0.23 ipTM=0.139 tol=24.9 2024-07-13 10:30:03,656 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=37.5 pTM=0.209 ipTM=0.138 tol=26.8 2024-07-13 10:30:42,668 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=39.9 pTM=0.236 ipTM=0.148 tol=24.6 2024-07-13 10:31:21,821 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=38.2 pTM=0.216 ipTM=0.144 tol=19.9 2024-07-13 10:32:00,901 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=39.2 pTM=0.223 ipTM=0.148 tol=13.2 2024-07-13 10:32:40,066 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=37.7 pTM=0.211 ipTM=0.144 tol=16.4 2024-07-13 10:33:19,100 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=39.6 pTM=0.227 ipTM=0.152 tol=17.3 2024-07-13 10:33:58,233 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=37.4 pTM=0.211 ipTM=0.143 tol=19 2024-07-13 10:34:37,275 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=39.5 pTM=0.226 ipTM=0.148 tol=15.9 2024-07-13 10:34:37,277 alphafold2_multimer_v3_model_4_seed_000 took 1214.5s (30 recycles) 2024-07-13 10:35:17,897 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=39.9 pTM=0.187 ipTM=0.122 2024-07-13 10:35:57,208 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=38 pTM=0.207 ipTM=0.125 tol=28.2 2024-07-13 10:36:36,420 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=36.6 pTM=0.206 ipTM=0.128 tol=24.6 2024-07-13 10:37:15,566 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=38.2 pTM=0.221 ipTM=0.129 tol=17.9 2024-07-13 10:37:54,803 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=36.1 pTM=0.21 ipTM=0.128 tol=13 2024-07-13 10:38:33,989 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=37.7 pTM=0.218 ipTM=0.128 tol=13.2 2024-07-13 10:39:13,075 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=40.5 pTM=0.258 ipTM=0.129 tol=22.6 2024-07-13 10:39:52,060 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=44.2 pTM=0.291 ipTM=0.13 tol=19.9 2024-07-13 10:40:31,090 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=41.9 pTM=0.273 ipTM=0.131 tol=10.6 2024-07-13 10:41:10,076 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=44 pTM=0.303 ipTM=0.131 tol=16.1 2024-07-13 10:41:49,065 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=43.2 pTM=0.288 ipTM=0.131 tol=18.5 2024-07-13 10:42:28,086 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=42.1 pTM=0.272 ipTM=0.131 tol=13.7 2024-07-13 10:43:07,229 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=38.1 pTM=0.236 ipTM=0.127 tol=10.5 2024-07-13 10:43:46,250 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=42.2 pTM=0.284 ipTM=0.13 tol=15.6 2024-07-13 10:44:25,279 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=41.7 pTM=0.296 ipTM=0.131 tol=14.2 2024-07-13 10:45:04,330 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=41.7 pTM=0.288 ipTM=0.129 tol=21.3 2024-07-13 10:45:43,327 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=43.6 pTM=0.288 ipTM=0.13 tol=17.3 2024-07-13 10:46:22,414 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=39.4 pTM=0.249 ipTM=0.127 tol=13.8 2024-07-13 10:47:01,378 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=43.2 pTM=0.283 ipTM=0.136 tol=13.3 2024-07-13 10:47:40,362 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=41.8 pTM=0.268 ipTM=0.131 tol=15.1 2024-07-13 10:48:19,316 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=43.5 pTM=0.285 ipTM=0.131 tol=9.66 2024-07-13 10:48:58,282 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=42 pTM=0.272 ipTM=0.131 tol=5.6 2024-07-13 10:49:37,299 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=41.7 pTM=0.258 ipTM=0.128 tol=13.6 2024-07-13 10:50:16,267 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=42.8 pTM=0.281 ipTM=0.136 tol=18.1 2024-07-13 10:50:55,252 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=42.4 pTM=0.295 ipTM=0.131 tol=18 2024-07-13 10:51:34,195 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=43.8 pTM=0.301 ipTM=0.135 tol=20.6 2024-07-13 10:52:13,238 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=41.2 pTM=0.258 ipTM=0.128 tol=18.9 2024-07-13 10:52:52,263 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=42.2 pTM=0.262 ipTM=0.128 tol=15.3 2024-07-13 10:53:31,215 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=44.8 pTM=0.292 ipTM=0.129 tol=74.2 2024-07-13 10:54:10,044 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=46 pTM=0.315 ipTM=0.139 tol=23.2 2024-07-13 10:54:48,862 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=46.5 pTM=0.315 ipTM=0.137 tol=15.3 2024-07-13 10:54:48,863 alphafold2_multimer_v3_model_5_seed_000 took 1210.3s (30 recycles) 2024-07-13 10:54:50,931 reranking models by 'multimer' metric 2024-07-13 10:55:03,942 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-13 10:58:52,216 Relaxation took 241.3s 2024-07-13 10:58:52,216 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=46.5 pTM=0.315 ipTM=0.137 2024-07-13 11:02:18,350 Relaxation took 206.1s 2024-07-13 11:02:18,350 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=39.5 pTM=0.226 ipTM=0.148 2024-07-13 11:05:05,605 Relaxation took 167.3s 2024-07-13 11:05:05,606 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=41.4 pTM=0.227 ipTM=0.139 2024-07-13 11:08:02,593 Relaxation took 177.0s 2024-07-13 11:08:02,593 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=44.2 pTM=0.198 ipTM=0.137 2024-07-13 11:10:26,863 Relaxation took 144.3s 2024-07-13 11:10:26,863 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=43.4 pTM=0.205 ipTM=0.125 2024-07-13 11:10:30,945 Done