2024-07-13 09:10:39,503 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 09:10:39,822 Running on GPU
2024-07-13 09:10:48,455 Found 6 citations for tools or databases
2024-07-13 09:10:48,455 Query 1/1: SYMPK_HRK (length 1365)
2024-07-13 09:10:48,928 Sleeping for 9s. Reason: PENDING
2024-07-13 09:10:58,338 Sleeping for 5s. Reason: RUNNING
2024-07-13 09:11:03,779 Sleeping for 7s. Reason: RUNNING
2024-07-13 09:11:11,187 Sleeping for 8s. Reason: RUNNING
2024-07-13 09:11:19,610 Sleeping for 7s. Reason: RUNNING
2024-07-13 09:11:27,046 Sleeping for 8s. Reason: RUNNING
2024-07-13 09:11:35,465 Sleeping for 6s. Reason: RUNNING
2024-07-13 09:11:41,898 Sleeping for 6s. Reason: RUNNING
2024-07-13 09:11:49,814 Sleeping for 10s. Reason: PENDING
2024-07-13 09:12:00,226 Sleeping for 7s. Reason: RUNNING
2024-07-13 09:12:07,633 Sleeping for 6s. Reason: RUNNING
2024-07-13 09:12:14,043 Sleeping for 9s. Reason: RUNNING
2024-07-13 09:12:23,463 Sleeping for 9s. Reason: RUNNING
2024-07-13 09:12:32,877 Sleeping for 9s. Reason: RUNNING
2024-07-13 09:12:43,984 Setting max_seq=508, max_extra_seq=1585
2024-07-13 09:16:58,327 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=66.7 pTM=0.448 ipTM=0.248
2024-07-13 09:17:47,981 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66.9 pTM=0.454 ipTM=0.275 tol=9.91
2024-07-13 09:18:37,765 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=67.2 pTM=0.455 ipTM=0.278 tol=7.48
2024-07-13 09:19:27,562 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=67.3 pTM=0.456 ipTM=0.282 tol=4.7
2024-07-13 09:20:17,444 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=67.4 pTM=0.458 ipTM=0.298 tol=2.9
2024-07-13 09:21:07,332 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=67.3 pTM=0.458 ipTM=0.314 tol=1.7
2024-07-13 09:21:57,228 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=67.2 pTM=0.457 ipTM=0.296 tol=2.85
2024-07-13 09:22:47,090 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=67.2 pTM=0.455 ipTM=0.293 tol=1.52
2024-07-13 09:23:36,982 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=67.4 pTM=0.459 ipTM=0.316 tol=2.63
2024-07-13 09:24:26,857 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=67.3 pTM=0.456 ipTM=0.3 tol=3.77
2024-07-13 09:25:16,751 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=67.3 pTM=0.456 ipTM=0.296 tol=3.2
2024-07-13 09:26:06,649 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=67.6 pTM=0.456 ipTM=0.296 tol=3.14
2024-07-13 09:26:56,530 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.2 pTM=0.454 ipTM=0.293 tol=3.94
2024-07-13 09:27:46,534 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67.2 pTM=0.455 ipTM=0.307 tol=3.62
2024-07-13 09:28:36,528 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=67.4 pTM=0.455 ipTM=0.291 tol=3.9
2024-07-13 09:29:26,522 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=67.6 pTM=0.457 ipTM=0.305 tol=3.98
2024-07-13 09:30:16,537 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=67.6 pTM=0.458 ipTM=0.296 tol=2.83
2024-07-13 09:31:06,481 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=67.5 pTM=0.457 ipTM=0.316 tol=1.84
2024-07-13 09:31:56,479 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=67.5 pTM=0.458 ipTM=0.307 tol=3.41
2024-07-13 09:32:46,378 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=67.3 pTM=0.457 ipTM=0.307 tol=4.1
2024-07-13 09:33:36,281 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=67.4 pTM=0.458 ipTM=0.311 tol=3.53
2024-07-13 09:34:26,107 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=67.2 pTM=0.456 ipTM=0.308 tol=4.25
2024-07-13 09:35:15,929 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=67.3 pTM=0.455 ipTM=0.3 tol=1.73
2024-07-13 09:36:05,843 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=67.5 pTM=0.457 ipTM=0.312 tol=0.967
2024-07-13 09:36:55,745 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=67.6 pTM=0.456 ipTM=0.302 tol=5.63
2024-07-13 09:37:45,656 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=67.4 pTM=0.457 ipTM=0.308 tol=2.91
2024-07-13 09:38:35,558 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=67.2 pTM=0.453 ipTM=0.285 tol=3.55
2024-07-13 09:39:25,525 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=67.3 pTM=0.454 ipTM=0.284 tol=2.33
2024-07-13 09:40:15,531 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=67.4 pTM=0.457 ipTM=0.304 tol=2.59
2024-07-13 09:41:05,451 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=67.5 pTM=0.456 ipTM=0.291 tol=1.13
2024-07-13 09:41:55,385 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=67.6 pTM=0.456 ipTM=0.289 tol=3.42
2024-07-13 09:41:55,387 alphafold2_multimer_v3_model_1_seed_000 took 1717.6s (30 recycles)
2024-07-13 09:42:47,466 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=66.5 pTM=0.451 ipTM=0.26
2024-07-13 09:43:37,474 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=66.9 pTM=0.451 ipTM=0.268 tol=9.42
2024-07-13 09:44:27,509 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=68 pTM=0.453 ipTM=0.264 tol=6.41
2024-07-13 09:45:17,569 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=68.2 pTM=0.455 ipTM=0.26 tol=9.32
2024-07-13 09:46:07,592 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=68.3 pTM=0.456 ipTM=0.259 tol=5.02
2024-07-13 09:46:57,634 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=68.4 pTM=0.457 ipTM=0.254 tol=5.33
2024-07-13 09:47:47,686 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=68.3 pTM=0.457 ipTM=0.259 tol=2.46
2024-07-13 09:48:37,696 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.6 pTM=0.458 ipTM=0.259 tol=3.47
2024-07-13 09:49:27,692 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=68.1 pTM=0.457 ipTM=0.257 tol=9.81
2024-07-13 09:50:17,651 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=68.3 pTM=0.457 ipTM=0.255 tol=8.07
2024-07-13 09:51:07,655 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=68.1 pTM=0.457 ipTM=0.254 tol=8.31
2024-07-13 09:51:57,648 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=68.6 pTM=0.458 ipTM=0.256 tol=8.03
2024-07-13 09:52:47,682 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=68.3 pTM=0.457 ipTM=0.252 tol=3.32
2024-07-13 09:53:37,666 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=68.6 pTM=0.457 ipTM=0.255 tol=3.46
2024-07-13 09:54:27,649 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=68.1 pTM=0.456 ipTM=0.252 tol=9.33
2024-07-13 09:55:17,634 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=68.4 pTM=0.458 ipTM=0.257 tol=8
2024-07-13 09:56:07,592 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=68.4 pTM=0.457 ipTM=0.254 tol=2.26
2024-07-13 09:56:57,547 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=68.5 pTM=0.459 ipTM=0.255 tol=2.99
2024-07-13 09:57:47,489 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=68.3 pTM=0.458 ipTM=0.256 tol=9.3
2024-07-13 09:58:37,456 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=68.2 pTM=0.458 ipTM=0.257 tol=6.34
2024-07-13 09:59:27,431 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=68.4 pTM=0.459 ipTM=0.257 tol=2.96
2024-07-13 10:00:17,417 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=68.4 pTM=0.458 ipTM=0.257 tol=2.68
2024-07-13 10:01:07,379 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=68.4 pTM=0.458 ipTM=0.257 tol=3.47
2024-07-13 10:01:57,341 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=68.2 pTM=0.456 ipTM=0.257 tol=8.23
2024-07-13 10:02:47,343 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=68.4 pTM=0.458 ipTM=0.256 tol=7.36
2024-07-13 10:03:37,269 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=68.4 pTM=0.457 ipTM=0.258 tol=6.51
2024-07-13 10:04:27,215 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=68.4 pTM=0.458 ipTM=0.255 tol=6.22
2024-07-13 10:05:17,095 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=68.2 pTM=0.456 ipTM=0.251 tol=6.33
2024-07-13 10:06:06,974 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=68.4 pTM=0.458 ipTM=0.256 tol=5.7
2024-07-13 10:06:56,863 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=68.2 pTM=0.457 ipTM=0.257 tol=5.74
2024-07-13 10:07:46,752 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=68.4 pTM=0.458 ipTM=0.257 tol=7.08
2024-07-13 10:07:46,754 alphafold2_multimer_v3_model_2_seed_000 took 1549.3s (30 recycles)
2024-07-13 10:08:37,798 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=66.9 pTM=0.442 ipTM=0.282
2024-07-13 10:09:27,757 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.9 pTM=0.447 ipTM=0.307 tol=8.76
2024-07-13 10:10:17,665 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=67.3 pTM=0.446 ipTM=0.296 tol=6.94
2024-07-13 10:11:07,621 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=67.3 pTM=0.448 ipTM=0.297 tol=4.48
2024-07-13 10:11:57,568 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=67.3 pTM=0.449 ipTM=0.305 tol=3.13
2024-07-13 10:12:47,459 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=67.1 pTM=0.448 ipTM=0.295 tol=2.52
2024-07-13 10:13:37,378 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=67.1 pTM=0.45 ipTM=0.305 tol=2.27
2024-07-13 10:14:27,277 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=67.1 pTM=0.449 ipTM=0.301 tol=1.91
2024-07-13 10:15:17,203 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=67.3 pTM=0.451 ipTM=0.304 tol=2.43
2024-07-13 10:16:07,108 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=67.2 pTM=0.449 ipTM=0.292 tol=1.97
2024-07-13 10:16:57,031 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=67.4 pTM=0.453 ipTM=0.307 tol=2.28
2024-07-13 10:17:46,904 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=67.2 pTM=0.45 ipTM=0.302 tol=1.6
2024-07-13 10:18:36,774 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=67.2 pTM=0.449 ipTM=0.305 tol=2.01
2024-07-13 10:19:26,675 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=67.1 pTM=0.45 ipTM=0.3 tol=1.87
2024-07-13 10:20:16,598 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=67.1 pTM=0.449 ipTM=0.301 tol=2.07
2024-07-13 10:21:06,507 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67.4 pTM=0.452 ipTM=0.298 tol=2.39
2024-07-13 10:21:56,420 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=67.2 pTM=0.45 ipTM=0.299 tol=3.77
2024-07-13 10:22:46,284 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=67.4 pTM=0.453 ipTM=0.304 tol=5.77
2024-07-13 10:23:36,124 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=67.2 pTM=0.452 ipTM=0.308 tol=4.68
2024-07-13 10:24:25,952 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67.3 pTM=0.452 ipTM=0.297 tol=4.58
2024-07-13 10:25:15,780 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=67.4 pTM=0.453 ipTM=0.301 tol=4.75
2024-07-13 10:26:05,633 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.2 pTM=0.448 ipTM=0.288 tol=4.96
2024-07-13 10:26:55,515 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67.1 pTM=0.448 ipTM=0.299 tol=5.15
2024-07-13 10:27:45,357 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.3 pTM=0.449 ipTM=0.292 tol=3.82
2024-07-13 10:28:35,251 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.4 pTM=0.45 ipTM=0.292 tol=3
2024-07-13 10:29:25,127 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.4 pTM=0.449 ipTM=0.282 tol=5.56
2024-07-13 10:30:15,007 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67.2 pTM=0.447 ipTM=0.278 tol=3.41
2024-07-13 10:31:04,939 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.2 pTM=0.447 ipTM=0.279 tol=2.75
2024-07-13 10:31:54,907 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.4 pTM=0.45 ipTM=0.293 tol=2.97
2024-07-13 10:32:44,775 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.2 pTM=0.447 ipTM=0.28 tol=2.16
2024-07-13 10:33:34,662 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.2 pTM=0.45 ipTM=0.299 tol=2.62
2024-07-13 10:33:34,663 alphafold2_multimer_v3_model_3_seed_000 took 1546.8s (30 recycles)
2024-07-13 10:34:25,576 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=65.4 pTM=0.45 ipTM=0.322
2024-07-13 10:35:15,384 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=66.2 pTM=0.447 ipTM=0.29 tol=12.9
2024-07-13 10:36:05,221 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=66.2 pTM=0.448 ipTM=0.284 tol=3.12
2024-07-13 10:36:55,021 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=66.2 pTM=0.449 ipTM=0.268 tol=5
2024-07-13 10:37:44,794 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=66.1 pTM=0.448 ipTM=0.276 tol=4.14
2024-07-13 10:38:34,563 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=65.9 pTM=0.448 ipTM=0.277 tol=3.21
2024-07-13 10:39:24,310 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=65.8 pTM=0.449 ipTM=0.295 tol=3.59
2024-07-13 10:40:14,128 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=65.9 pTM=0.45 ipTM=0.288 tol=2.95
2024-07-13 10:41:03,971 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=66.2 pTM=0.451 ipTM=0.295 tol=2.29
2024-07-13 10:41:53,832 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=66 pTM=0.45 ipTM=0.293 tol=3.12
2024-07-13 10:42:43,643 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=66.1 pTM=0.451 ipTM=0.293 tol=2.81
2024-07-13 10:43:33,496 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=66.1 pTM=0.45 ipTM=0.299 tol=2.9
2024-07-13 10:44:23,289 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=65.9 pTM=0.449 ipTM=0.283 tol=1.91
2024-07-13 10:45:13,157 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=65.9 pTM=0.45 ipTM=0.298 tol=2.91
2024-07-13 10:46:03,014 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=65.9 pTM=0.45 ipTM=0.283 tol=2.67
2024-07-13 10:46:52,801 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=66.2 pTM=0.452 ipTM=0.291 tol=3.72
2024-07-13 10:47:42,644 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=66.1 pTM=0.451 ipTM=0.298 tol=2.49
2024-07-13 10:48:32,502 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=66 pTM=0.452 ipTM=0.303 tol=3.01
2024-07-13 10:49:22,293 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=66.1 pTM=0.452 ipTM=0.303 tol=3.92
2024-07-13 10:50:12,071 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=66.1 pTM=0.452 ipTM=0.3 tol=4.32
2024-07-13 10:51:01,864 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=66.2 pTM=0.454 ipTM=0.305 tol=3.87
2024-07-13 10:51:51,708 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=66 pTM=0.452 ipTM=0.3 tol=4.09
2024-07-13 10:52:41,559 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=65.9 pTM=0.452 ipTM=0.301 tol=5.86
2024-07-13 10:53:31,461 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=66.1 pTM=0.452 ipTM=0.306 tol=4.78
2024-07-13 10:54:21,340 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=65.9 pTM=0.452 ipTM=0.296 tol=5.07
2024-07-13 10:55:11,273 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=66.2 pTM=0.452 ipTM=0.296 tol=6.96
2024-07-13 10:56:01,249 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=65.9 pTM=0.452 ipTM=0.299 tol=4.98
2024-07-13 10:56:51,191 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66 pTM=0.452 ipTM=0.301 tol=4.11
2024-07-13 10:57:41,139 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=66 pTM=0.453 ipTM=0.305 tol=4.33
2024-07-13 10:58:31,003 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=66.1 pTM=0.453 ipTM=0.306 tol=3.75
2024-07-13 10:59:20,840 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=65.8 pTM=0.451 ipTM=0.304 tol=3.37
2024-07-13 10:59:20,841 alphafold2_multimer_v3_model_4_seed_000 took 1545.1s (30 recycles)
2024-07-13 11:00:11,893 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=65.4 pTM=0.449 ipTM=0.289
2024-07-13 11:01:01,867 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.6 pTM=0.451 ipTM=0.29 tol=11.2
2024-07-13 11:01:51,860 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=67.2 pTM=0.455 ipTM=0.3 tol=7.24
2024-07-13 11:02:41,842 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=67.5 pTM=0.455 ipTM=0.297 tol=6.06
2024-07-13 11:03:31,767 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67.5 pTM=0.456 ipTM=0.295 tol=4.76
2024-07-13 11:04:21,674 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=67.5 pTM=0.453 ipTM=0.294 tol=3.19
2024-07-13 11:05:11,542 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=67.4 pTM=0.454 ipTM=0.297 tol=2.61
2024-07-13 11:06:01,441 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=67.5 pTM=0.455 ipTM=0.298 tol=1.63
2024-07-13 11:06:51,370 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=67.5 pTM=0.455 ipTM=0.299 tol=2.97
2024-07-13 11:07:41,306 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67.6 pTM=0.455 ipTM=0.302 tol=3.03
2024-07-13 11:08:31,348 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67.8 pTM=0.459 ipTM=0.318 tol=1.65
2024-07-13 11:09:21,392 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.8 pTM=0.458 ipTM=0.322 tol=3.05
2024-07-13 11:10:11,420 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.6 pTM=0.457 ipTM=0.318 tol=3.68
2024-07-13 11:11:01,491 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=67.6 pTM=0.458 ipTM=0.322 tol=2
2024-07-13 11:11:51,568 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=67.7 pTM=0.458 ipTM=0.318 tol=2.45
2024-07-13 11:12:41,664 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.9 pTM=0.461 ipTM=0.328 tol=2.76
2024-07-13 11:13:31,750 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.7 pTM=0.459 ipTM=0.319 tol=1.92
2024-07-13 11:14:21,827 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=67.6 pTM=0.458 ipTM=0.312 tol=3.57
2024-07-13 11:15:11,885 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=67.6 pTM=0.458 ipTM=0.305 tol=3.54
2024-07-13 11:16:01,937 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=67.6 pTM=0.459 ipTM=0.32 tol=3.56
2024-07-13 11:16:51,959 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=67.8 pTM=0.461 ipTM=0.316 tol=3.66
2024-07-13 11:17:42,014 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=67.8 pTM=0.459 ipTM=0.316 tol=3.36
2024-07-13 11:18:32,077 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=67.8 pTM=0.459 ipTM=0.322 tol=3.66
2024-07-13 11:19:22,151 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=67.8 pTM=0.46 ipTM=0.317 tol=1.8
2024-07-13 11:20:12,199 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=67.8 pTM=0.46 ipTM=0.316 tol=0.884
2024-07-13 11:21:02,278 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=67.9 pTM=0.461 ipTM=0.322 tol=3.12
2024-07-13 11:21:52,387 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=67.7 pTM=0.458 ipTM=0.327 tol=1.58
2024-07-13 11:22:42,493 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=67.6 pTM=0.457 ipTM=0.323 tol=1.3
2024-07-13 11:23:32,614 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=67.8 pTM=0.46 ipTM=0.333 tol=1.42
2024-07-13 11:24:22,645 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=67.8 pTM=0.459 ipTM=0.328 tol=1.63
2024-07-13 11:25:12,719 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67.7 pTM=0.459 ipTM=0.323 tol=1.64
2024-07-13 11:25:12,720 alphafold2_multimer_v3_model_5_seed_000 took 1550.8s (30 recycles)
2024-07-13 11:25:13,842 reranking models by 'multimer' metric
2024-07-13 11:25:18,603 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-13 11:27:12,712 Relaxation took 118.9s
2024-07-13 11:27:12,712 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67.7 pTM=0.459 ipTM=0.323
2024-07-13 11:28:56,057 Relaxation took 103.3s
2024-07-13 11:28:56,058 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=65.8 pTM=0.451 ipTM=0.304
2024-07-13 11:33:21,245 Relaxation took 265.2s
2024-07-13 11:33:21,245 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.2 pTM=0.45 ipTM=0.299
2024-07-13 11:35:44,946 Relaxation took 143.7s
2024-07-13 11:35:44,946 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=67.6 pTM=0.456 ipTM=0.289
2024-07-13 11:37:44,467 Relaxation took 119.5s
2024-07-13 11:37:44,467 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=68.4 pTM=0.458 ipTM=0.257
2024-07-13 11:37:52,649 Done