2024-07-13 09:31:54,182 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 09:31:54,517 Running on GPU
2024-07-13 09:32:11,310 Found 6 citations for tools or databases
2024-07-13 09:32:11,311 Query 1/1: SYT16_GSDME (length 1141)
2024-07-13 09:32:11,773 Sleeping for 8s. Reason: PENDING
2024-07-13 09:32:20,195 Sleeping for 8s. Reason: RUNNING
2024-07-13 09:32:28,627 Sleeping for 8s. Reason: RUNNING
2024-07-13 09:32:37,049 Sleeping for 7s. Reason: RUNNING
2024-07-13 09:32:44,466 Sleeping for 5s. Reason: RUNNING
2024-07-13 09:32:49,879 Sleeping for 10s. Reason: RUNNING
2024-07-13 09:33:00,317 Sleeping for 6s. Reason: RUNNING
2024-07-13 09:33:06,747 Sleeping for 10s. Reason: RUNNING
2024-07-13 09:33:17,166 Sleeping for 6s. Reason: RUNNING
2024-07-13 09:33:23,582 Sleeping for 5s. Reason: RUNNING
2024-07-13 09:33:29,013 Sleeping for 10s. Reason: RUNNING
2024-07-13 09:33:40,937 Sleeping for 8s. Reason: PENDING
2024-07-13 09:33:49,344 Sleeping for 7s. Reason: RUNNING
2024-07-13 09:33:56,769 Sleeping for 5s. Reason: RUNNING
2024-07-13 09:34:02,176 Sleeping for 6s. Reason: RUNNING
2024-07-13 09:34:08,588 Sleeping for 9s. Reason: RUNNING
2024-07-13 09:34:18,010 Sleeping for 9s. Reason: RUNNING
2024-07-13 09:34:27,464 Sleeping for 6s. Reason: RUNNING
2024-07-13 09:34:33,889 Sleeping for 5s. Reason: RUNNING
2024-07-13 09:34:41,482 Setting max_seq=508, max_extra_seq=2048
2024-07-13 09:38:41,266 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=55 pTM=0.413 ipTM=0.188
2024-07-13 09:39:11,557 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=54.4 pTM=0.411 ipTM=0.183 tol=15.3
2024-07-13 09:39:42,020 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=54.7 pTM=0.414 ipTM=0.179 tol=6.84
2024-07-13 09:40:12,541 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=54.8 pTM=0.417 ipTM=0.188 tol=5.23
2024-07-13 09:40:43,273 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=54.8 pTM=0.414 ipTM=0.196 tol=3.07
2024-07-13 09:41:13,929 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=54.4 pTM=0.406 ipTM=0.197 tol=4.79
2024-07-13 09:41:44,700 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=54.2 pTM=0.405 ipTM=0.194 tol=9.63
2024-07-13 09:42:15,444 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=54.4 pTM=0.406 ipTM=0.192 tol=6.82
2024-07-13 09:42:46,243 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=54.9 pTM=0.406 ipTM=0.192 tol=5.82
2024-07-13 09:43:17,052 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=55 pTM=0.406 ipTM=0.192 tol=3.78
2024-07-13 09:43:47,870 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=54.8 pTM=0.405 ipTM=0.188 tol=3.2
2024-07-13 09:44:18,729 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=54.6 pTM=0.406 ipTM=0.194 tol=3.84
2024-07-13 09:44:49,583 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=54.9 pTM=0.408 ipTM=0.191 tol=4.93
2024-07-13 09:45:20,448 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=54.4 pTM=0.408 ipTM=0.195 tol=3.21
2024-07-13 09:45:51,295 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=54.8 pTM=0.408 ipTM=0.195 tol=2.27
2024-07-13 09:46:22,166 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=54.5 pTM=0.406 ipTM=0.197 tol=2.07
2024-07-13 09:46:53,017 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=54.8 pTM=0.404 ipTM=0.187 tol=3.28
2024-07-13 09:47:23,877 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=54.5 pTM=0.406 ipTM=0.194 tol=3.18
2024-07-13 09:47:54,710 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=54.8 pTM=0.404 ipTM=0.189 tol=2.32
2024-07-13 09:48:25,511 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=54.5 pTM=0.407 ipTM=0.197 tol=2.62
2024-07-13 09:48:56,305 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=54.8 pTM=0.41 ipTM=0.204 tol=2.71
2024-07-13 09:49:27,057 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=54.3 pTM=0.402 ipTM=0.189 tol=2.9
2024-07-13 09:49:57,806 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=54.5 pTM=0.403 ipTM=0.19 tol=2.21
2024-07-13 09:50:28,551 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=54.7 pTM=0.405 ipTM=0.201 tol=3.46
2024-07-13 09:50:59,259 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=55 pTM=0.405 ipTM=0.196 tol=1.88
2024-07-13 09:51:29,972 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=55 pTM=0.407 ipTM=0.2 tol=1.46
2024-07-13 09:52:00,796 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=54.8 pTM=0.405 ipTM=0.189 tol=1.36
2024-07-13 09:52:31,490 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=54.9 pTM=0.408 ipTM=0.198 tol=1.61
2024-07-13 09:53:02,199 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=54.9 pTM=0.41 ipTM=0.198 tol=1.68
2024-07-13 09:53:32,931 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=54.6 pTM=0.407 ipTM=0.197 tol=1.93
2024-07-13 09:54:03,696 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=54.9 pTM=0.408 ipTM=0.186 tol=2.92
2024-07-13 09:54:03,697 alphafold2_multimer_v3_model_1_seed_000 took 1116.9s (30 recycles)
2024-07-13 09:54:35,147 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=55.6 pTM=0.432 ipTM=0.177
2024-07-13 09:55:05,875 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=55.7 pTM=0.424 ipTM=0.166 tol=13.2
2024-07-13 09:55:36,623 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=55.6 pTM=0.416 ipTM=0.159 tol=8.09
2024-07-13 09:56:07,389 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=55.7 pTM=0.411 ipTM=0.158 tol=10.2
2024-07-13 09:56:38,178 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=56.2 pTM=0.409 ipTM=0.161 tol=9.43
2024-07-13 09:57:08,949 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=56.4 pTM=0.408 ipTM=0.161 tol=8.37
2024-07-13 09:57:39,720 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=56.5 pTM=0.408 ipTM=0.16 tol=3.35
2024-07-13 09:58:10,519 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=56.6 pTM=0.407 ipTM=0.162 tol=2.98
2024-07-13 09:58:41,273 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=56.7 pTM=0.41 ipTM=0.16 tol=3.2
2024-07-13 09:59:11,969 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=56.8 pTM=0.411 ipTM=0.163 tol=2.44
2024-07-13 09:59:42,674 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=56.8 pTM=0.41 ipTM=0.162 tol=1.66
2024-07-13 10:00:13,383 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=56.9 pTM=0.411 ipTM=0.159 tol=4.11
2024-07-13 10:00:44,132 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=56.8 pTM=0.413 ipTM=0.16 tol=3.57
2024-07-13 10:01:14,860 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=56.7 pTM=0.413 ipTM=0.16 tol=2.97
2024-07-13 10:01:45,608 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=56.8 pTM=0.413 ipTM=0.161 tol=2.65
2024-07-13 10:02:16,322 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=56.8 pTM=0.414 ipTM=0.159 tol=1.7
2024-07-13 10:02:47,073 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=57.1 pTM=0.414 ipTM=0.156 tol=1.96
2024-07-13 10:03:17,788 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=57 pTM=0.415 ipTM=0.158 tol=2.23
2024-07-13 10:03:48,548 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=57 pTM=0.414 ipTM=0.158 tol=1.55
2024-07-13 10:04:19,401 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=56.7 pTM=0.412 ipTM=0.157 tol=1.66
2024-07-13 10:04:50,157 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=56.6 pTM=0.411 ipTM=0.155 tol=3.5
2024-07-13 10:05:20,917 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=56.4 pTM=0.411 ipTM=0.155 tol=3.7
2024-07-13 10:05:51,676 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=56.5 pTM=0.41 ipTM=0.155 tol=2.12
2024-07-13 10:06:22,432 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=56.8 pTM=0.411 ipTM=0.158 tol=1.75
2024-07-13 10:06:53,215 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=56.8 pTM=0.41 ipTM=0.156 tol=1.71
2024-07-13 10:07:23,976 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=56.9 pTM=0.414 ipTM=0.157 tol=1.58
2024-07-13 10:07:54,700 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=56.8 pTM=0.41 ipTM=0.157 tol=1.01
2024-07-13 10:08:25,388 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=56.8 pTM=0.412 ipTM=0.159 tol=3.99
2024-07-13 10:08:56,120 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=56.6 pTM=0.409 ipTM=0.156 tol=3.87
2024-07-13 10:09:26,806 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=56.8 pTM=0.412 ipTM=0.161 tol=3.05
2024-07-13 10:09:57,465 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=56.8 pTM=0.411 ipTM=0.156 tol=1.78
2024-07-13 10:09:57,466 alphafold2_multimer_v3_model_2_seed_000 took 953.0s (30 recycles)
2024-07-13 10:10:28,909 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=54.7 pTM=0.401 ipTM=0.173
2024-07-13 10:10:59,661 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=53.6 pTM=0.396 ipTM=0.168 tol=15.5
2024-07-13 10:11:30,423 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=54.3 pTM=0.42 ipTM=0.179 tol=10.6
2024-07-13 10:12:01,203 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=54.1 pTM=0.418 ipTM=0.173 tol=7.38
2024-07-13 10:12:31,956 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=54.2 pTM=0.424 ipTM=0.176 tol=4.49
2024-07-13 10:13:02,758 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=53.5 pTM=0.416 ipTM=0.167 tol=7.78
2024-07-13 10:13:33,577 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=54.2 pTM=0.421 ipTM=0.166 tol=6.88
2024-07-13 10:14:04,351 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=54.1 pTM=0.419 ipTM=0.17 tol=6.97
2024-07-13 10:14:35,086 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=54.2 pTM=0.426 ipTM=0.174 tol=3.88
2024-07-13 10:15:05,867 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=53.9 pTM=0.422 ipTM=0.173 tol=2.55
2024-07-13 10:15:36,609 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=54.1 pTM=0.426 ipTM=0.174 tol=2.85
2024-07-13 10:16:07,412 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=53.8 pTM=0.42 ipTM=0.17 tol=4.82
2024-07-13 10:16:38,194 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=54.2 pTM=0.425 ipTM=0.166 tol=5.05
2024-07-13 10:17:08,992 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=53.6 pTM=0.42 ipTM=0.173 tol=3.29
2024-07-13 10:17:39,799 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=53.7 pTM=0.422 ipTM=0.169 tol=2.37
2024-07-13 10:18:10,626 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=53.7 pTM=0.418 ipTM=0.166 tol=2.42
2024-07-13 10:18:41,459 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=53.9 pTM=0.42 ipTM=0.172 tol=5.46
2024-07-13 10:19:12,281 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=53.9 pTM=0.42 ipTM=0.167 tol=2.74
2024-07-13 10:19:43,109 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=53.8 pTM=0.421 ipTM=0.167 tol=3.19
2024-07-13 10:20:13,936 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=53.8 pTM=0.419 ipTM=0.168 tol=6.91
2024-07-13 10:20:44,772 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=53.8 pTM=0.422 ipTM=0.167 tol=7.2
2024-07-13 10:21:15,591 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=53.6 pTM=0.417 ipTM=0.164 tol=7.49
2024-07-13 10:21:46,386 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=53.9 pTM=0.422 ipTM=0.174 tol=3.96
2024-07-13 10:22:17,231 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=53.8 pTM=0.419 ipTM=0.171 tol=2.78
2024-07-13 10:22:48,097 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=54.1 pTM=0.421 ipTM=0.172 tol=6.3
2024-07-13 10:23:18,911 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54 pTM=0.419 ipTM=0.175 tol=11.3
2024-07-13 10:23:49,736 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=53.3 pTM=0.416 ipTM=0.167 tol=4.75
2024-07-13 10:24:20,562 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=53.8 pTM=0.417 ipTM=0.176 tol=6.76
2024-07-13 10:24:51,408 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=53.9 pTM=0.417 ipTM=0.17 tol=4.95
2024-07-13 10:25:22,252 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=53.6 pTM=0.412 ipTM=0.169 tol=2.45
2024-07-13 10:25:53,117 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=53.8 pTM=0.415 ipTM=0.165 tol=2.15
2024-07-13 10:25:53,118 alphafold2_multimer_v3_model_3_seed_000 took 954.9s (30 recycles)
2024-07-13 10:26:24,727 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=52.8 pTM=0.396 ipTM=0.207
2024-07-13 10:26:55,483 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=52.9 pTM=0.415 ipTM=0.212 tol=10.7
2024-07-13 10:27:26,262 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=52.7 pTM=0.422 ipTM=0.197 tol=7.02
2024-07-13 10:27:57,089 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=52.7 pTM=0.42 ipTM=0.192 tol=8.54
2024-07-13 10:28:27,876 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=52.5 pTM=0.42 ipTM=0.188 tol=7.23
2024-07-13 10:28:58,688 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=52.2 pTM=0.412 ipTM=0.181 tol=7.82
2024-07-13 10:29:29,487 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=52.5 pTM=0.417 ipTM=0.179 tol=8.36
2024-07-13 10:30:00,330 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=52.3 pTM=0.41 ipTM=0.179 tol=9.54
2024-07-13 10:30:31,125 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=52.4 pTM=0.422 ipTM=0.181 tol=7.6
2024-07-13 10:31:01,938 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=52.4 pTM=0.419 ipTM=0.209 tol=5.25
2024-07-13 10:31:32,711 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=52.5 pTM=0.423 ipTM=0.214 tol=10
2024-07-13 10:32:03,459 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=52 pTM=0.416 ipTM=0.217 tol=6.32
2024-07-13 10:32:34,211 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=52.6 pTM=0.423 ipTM=0.223 tol=11.5
2024-07-13 10:33:04,962 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=51.8 pTM=0.416 ipTM=0.226 tol=5.74
2024-07-13 10:33:35,723 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=52.1 pTM=0.417 ipTM=0.219 tol=5.42
2024-07-13 10:34:06,492 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=51.9 pTM=0.414 ipTM=0.223 tol=10.6
2024-07-13 10:34:37,238 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=52.1 pTM=0.415 ipTM=0.211 tol=13.6
2024-07-13 10:35:08,009 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=51.9 pTM=0.413 ipTM=0.222 tol=6.68
2024-07-13 10:35:38,781 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=52 pTM=0.415 ipTM=0.217 tol=6.56
2024-07-13 10:36:09,545 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=51.9 pTM=0.413 ipTM=0.227 tol=4.65
2024-07-13 10:36:40,287 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=52.3 pTM=0.417 ipTM=0.221 tol=3.55
2024-07-13 10:37:11,073 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=52 pTM=0.414 ipTM=0.216 tol=4.46
2024-07-13 10:37:41,863 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=52.2 pTM=0.418 ipTM=0.217 tol=6.6
2024-07-13 10:38:12,645 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=52.1 pTM=0.415 ipTM=0.221 tol=3.75
2024-07-13 10:38:43,570 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=52.3 pTM=0.416 ipTM=0.221 tol=4.34
2024-07-13 10:39:14,279 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=52.4 pTM=0.414 ipTM=0.222 tol=5.63
2024-07-13 10:39:44,976 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=52.3 pTM=0.416 ipTM=0.22 tol=4.2
2024-07-13 10:40:15,652 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=52.3 pTM=0.414 ipTM=0.225 tol=4.56
2024-07-13 10:40:46,361 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=52.3 pTM=0.415 ipTM=0.219 tol=6.88
2024-07-13 10:41:17,047 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=52.2 pTM=0.411 ipTM=0.218 tol=6.84
2024-07-13 10:41:47,728 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=52.5 pTM=0.414 ipTM=0.21 tol=8.7
2024-07-13 10:41:47,729 alphafold2_multimer_v3_model_4_seed_000 took 953.8s (30 recycles)
2024-07-13 10:42:19,277 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=54.2 pTM=0.396 ipTM=0.17
2024-07-13 10:42:50,029 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=54.1 pTM=0.405 ipTM=0.164 tol=10.9
2024-07-13 10:43:20,764 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=54.4 pTM=0.414 ipTM=0.165 tol=5.62
2024-07-13 10:43:51,528 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=54 pTM=0.407 ipTM=0.164 tol=5.92
2024-07-13 10:44:22,327 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=54.2 pTM=0.412 ipTM=0.164 tol=6.68
2024-07-13 10:44:53,130 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=54.2 pTM=0.407 ipTM=0.165 tol=4.84
2024-07-13 10:45:23,925 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=54.6 pTM=0.415 ipTM=0.166 tol=4.45
2024-07-13 10:45:54,703 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=54.4 pTM=0.411 ipTM=0.165 tol=7.07
2024-07-13 10:46:25,640 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=54.6 pTM=0.419 ipTM=0.169 tol=8.07
2024-07-13 10:46:56,430 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=54.6 pTM=0.413 ipTM=0.165 tol=3.69
2024-07-13 10:47:27,196 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=54.7 pTM=0.421 ipTM=0.168 tol=3.82
2024-07-13 10:47:57,976 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=54.4 pTM=0.413 ipTM=0.166 tol=6.38
2024-07-13 10:48:28,779 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=54.6 pTM=0.422 ipTM=0.172 tol=6.69
2024-07-13 10:48:59,591 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=54.4 pTM=0.413 ipTM=0.165 tol=6.13
2024-07-13 10:49:30,416 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=54.5 pTM=0.422 ipTM=0.178 tol=5.49
2024-07-13 10:50:01,233 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=54.3 pTM=0.415 ipTM=0.168 tol=6.6
2024-07-13 10:50:32,047 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=54.5 pTM=0.422 ipTM=0.172 tol=2.23
2024-07-13 10:51:02,863 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=54.3 pTM=0.414 ipTM=0.166 tol=7
2024-07-13 10:51:33,656 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=54.6 pTM=0.423 ipTM=0.168 tol=6.11
2024-07-13 10:52:04,481 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=54.4 pTM=0.414 ipTM=0.164 tol=4.47
2024-07-13 10:52:35,392 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=54.4 pTM=0.421 ipTM=0.175 tol=4.01
2024-07-13 10:53:06,193 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=54.2 pTM=0.413 ipTM=0.166 tol=7.12
2024-07-13 10:53:37,103 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=54.3 pTM=0.422 ipTM=0.172 tol=3.7
2024-07-13 10:54:07,907 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=54.3 pTM=0.415 ipTM=0.167 tol=2.87
2024-07-13 10:54:38,792 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=54.4 pTM=0.423 ipTM=0.171 tol=2.56
2024-07-13 10:55:09,604 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=54.1 pTM=0.415 ipTM=0.166 tol=8.61
2024-07-13 10:55:40,382 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=54.1 pTM=0.42 ipTM=0.172 tol=5.77
2024-07-13 10:56:11,192 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=54 pTM=0.415 ipTM=0.167 tol=6.28
2024-07-13 10:56:41,954 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=53.9 pTM=0.419 ipTM=0.171 tol=6.34
2024-07-13 10:57:12,795 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=53.8 pTM=0.414 ipTM=0.169 tol=6.2
2024-07-13 10:57:43,616 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=54.3 pTM=0.421 ipTM=0.172 tol=3.41
2024-07-13 10:57:43,617 alphafold2_multimer_v3_model_5_seed_000 took 955.1s (30 recycles)
2024-07-13 10:57:44,407 reranking models by 'multimer' metric
2024-07-13 10:58:02,952 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-13 11:00:13,620 Relaxation took 149.2s
2024-07-13 11:00:13,620 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=52.5 pTM=0.414 ipTM=0.21
2024-07-13 11:02:24,360 Relaxation took 130.7s
2024-07-13 11:02:24,360 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=54.9 pTM=0.408 ipTM=0.186
2024-07-13 11:04:55,009 Relaxation took 150.6s
2024-07-13 11:04:55,009 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=54.3 pTM=0.421 ipTM=0.172
2024-07-13 11:07:32,380 Relaxation took 157.4s
2024-07-13 11:07:32,381 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=53.8 pTM=0.415 ipTM=0.165
2024-07-13 11:09:35,972 Relaxation took 123.6s
2024-07-13 11:09:35,972 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=56.8 pTM=0.411 ipTM=0.156
2024-07-13 11:09:40,149 Done