2024-07-13 09:53:23,971 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-13 09:53:24,302 Running on GPU 2024-07-13 09:53:34,450 Found 6 citations for tools or databases 2024-07-13 09:53:34,450 Query 1/1: T106B_HNRPQ (length 897) 2024-07-13 09:53:34,921 Sleeping for 5s. Reason: PENDING 2024-07-13 09:53:40,337 Sleeping for 8s. Reason: RUNNING 2024-07-13 09:53:48,753 Sleeping for 10s. Reason: RUNNING 2024-07-13 09:53:59,174 Sleeping for 7s. Reason: RUNNING 2024-07-13 09:54:06,599 Sleeping for 10s. Reason: RUNNING 2024-07-13 09:54:17,023 Sleeping for 8s. Reason: RUNNING 2024-07-13 09:54:25,461 Sleeping for 7s. Reason: RUNNING 2024-07-13 09:54:32,885 Sleeping for 7s. Reason: RUNNING 2024-07-13 09:54:40,310 Sleeping for 5s. Reason: RUNNING 2024-07-13 09:54:45,739 Sleeping for 5s. Reason: RUNNING 2024-07-13 09:54:51,165 Sleeping for 9s. Reason: RUNNING 2024-07-13 09:55:00,600 Sleeping for 10s. Reason: RUNNING 2024-07-13 09:55:12,710 Sleeping for 10s. Reason: PENDING 2024-07-13 09:55:23,131 Sleeping for 9s. Reason: RUNNING 2024-07-13 09:55:32,558 Sleeping for 10s. Reason: RUNNING 2024-07-13 09:55:42,996 Sleeping for 9s. Reason: RUNNING 2024-07-13 09:55:52,416 Sleeping for 7s. Reason: RUNNING 2024-07-13 09:55:59,835 Sleeping for 8s. Reason: RUNNING 2024-07-13 09:56:08,268 Sleeping for 9s. Reason: RUNNING 2024-07-13 09:56:17,681 Sleeping for 6s. Reason: RUNNING 2024-07-13 09:56:24,122 Sleeping for 5s. Reason: RUNNING 2024-07-13 09:56:32,481 Setting max_seq=508, max_extra_seq=2048 2024-07-13 10:00:26,777 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=61.4 pTM=0.397 ipTM=0.13 2024-07-13 10:00:43,597 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=62.5 pTM=0.413 ipTM=0.152 tol=21.9 2024-07-13 10:01:00,460 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=61.9 pTM=0.401 ipTM=0.148 tol=5.13 2024-07-13 10:01:17,356 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=62.2 pTM=0.409 ipTM=0.153 tol=4.04 2024-07-13 10:01:34,260 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=62.5 pTM=0.412 ipTM=0.151 tol=3.03 2024-07-13 10:01:51,186 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=62.5 pTM=0.413 ipTM=0.149 tol=5.17 2024-07-13 10:02:08,130 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=62.4 pTM=0.409 ipTM=0.145 tol=1.96 2024-07-13 10:02:25,091 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61.8 pTM=0.401 ipTM=0.143 tol=4.15 2024-07-13 10:02:42,066 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=62.1 pTM=0.403 ipTM=0.143 tol=4.38 2024-07-13 10:02:59,046 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=61.8 pTM=0.401 ipTM=0.144 tol=5.06 2024-07-13 10:03:16,035 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=62.1 pTM=0.401 ipTM=0.141 tol=3.79 2024-07-13 10:03:33,018 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=62.2 pTM=0.404 ipTM=0.142 tol=2.39 2024-07-13 10:03:50,000 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=61.8 pTM=0.402 ipTM=0.141 tol=1.5 2024-07-13 10:04:06,975 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=62.1 pTM=0.403 ipTM=0.141 tol=1.79 2024-07-13 10:04:23,963 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=61.8 pTM=0.4 ipTM=0.141 tol=2.51 2024-07-13 10:04:40,936 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=61.9 pTM=0.395 ipTM=0.141 tol=4.38 2024-07-13 10:04:57,917 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=62.6 pTM=0.409 ipTM=0.14 tol=2.52 2024-07-13 10:05:14,887 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=62.3 pTM=0.406 ipTM=0.14 tol=5.14 2024-07-13 10:05:31,859 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=62.4 pTM=0.406 ipTM=0.14 tol=3.24 2024-07-13 10:05:48,826 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=62.4 pTM=0.402 ipTM=0.14 tol=3.44 2024-07-13 10:06:05,799 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=62.7 pTM=0.41 ipTM=0.141 tol=4.17 2024-07-13 10:06:22,768 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=62.5 pTM=0.405 ipTM=0.143 tol=4.16 2024-07-13 10:06:39,735 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=62.6 pTM=0.404 ipTM=0.139 tol=3.65 2024-07-13 10:06:56,710 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=62.8 pTM=0.407 ipTM=0.137 tol=5.45 2024-07-13 10:07:13,685 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=62.8 pTM=0.413 ipTM=0.141 tol=3.6 2024-07-13 10:07:30,658 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=62.3 pTM=0.4 ipTM=0.141 tol=3.92 2024-07-13 10:07:47,635 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=62.4 pTM=0.405 ipTM=0.139 tol=4.72 2024-07-13 10:08:04,620 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=62.8 pTM=0.412 ipTM=0.138 tol=3.54 2024-07-13 10:08:21,591 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=62.3 pTM=0.402 ipTM=0.137 tol=6.88 2024-07-13 10:08:38,580 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=62.7 pTM=0.412 ipTM=0.137 tol=5.47 2024-07-13 10:08:55,580 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=62.7 pTM=0.415 ipTM=0.137 tol=3.25 2024-07-13 10:08:55,581 alphafold2_multimer_v3_model_1_seed_000 took 689.9s (30 recycles) 2024-07-13 10:09:13,094 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=60.8 pTM=0.374 ipTM=0.128 2024-07-13 10:09:30,124 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=62.2 pTM=0.396 ipTM=0.123 tol=15.6 2024-07-13 10:09:47,179 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=61.4 pTM=0.384 ipTM=0.127 tol=13.3 2024-07-13 10:10:04,220 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=61.9 pTM=0.391 ipTM=0.133 tol=6.86 2024-07-13 10:10:21,257 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=62.3 pTM=0.394 ipTM=0.135 tol=5.4 2024-07-13 10:10:38,288 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=61.8 pTM=0.396 ipTM=0.141 tol=8.87 2024-07-13 10:10:55,320 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.1 pTM=0.397 ipTM=0.146 tol=4.83 2024-07-13 10:11:12,369 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=61.9 pTM=0.396 ipTM=0.143 tol=6.27 2024-07-13 10:11:29,414 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=61.9 pTM=0.397 ipTM=0.144 tol=5.84 2024-07-13 10:11:46,459 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=61.6 pTM=0.392 ipTM=0.141 tol=5.55 2024-07-13 10:12:03,527 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62.2 pTM=0.404 ipTM=0.142 tol=7.1 2024-07-13 10:12:20,584 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=62.3 pTM=0.406 ipTM=0.143 tol=3.5 2024-07-13 10:12:37,643 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=61.9 pTM=0.402 ipTM=0.143 tol=5.73 2024-07-13 10:12:54,698 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=62.3 pTM=0.407 ipTM=0.143 tol=3.72 2024-07-13 10:13:11,743 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=61.9 pTM=0.406 ipTM=0.153 tol=2.31 2024-07-13 10:13:28,777 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=61.9 pTM=0.398 ipTM=0.145 tol=4.6 2024-07-13 10:13:45,821 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=62.5 pTM=0.41 ipTM=0.146 tol=1.93 2024-07-13 10:14:02,859 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62.1 pTM=0.405 ipTM=0.147 tol=2.92 2024-07-13 10:14:19,895 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=62 pTM=0.397 ipTM=0.143 tol=1.88 2024-07-13 10:14:36,926 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62.1 pTM=0.402 ipTM=0.143 tol=1.52 2024-07-13 10:14:53,963 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=61.8 pTM=0.398 ipTM=0.145 tol=3.51 2024-07-13 10:15:10,999 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=61.8 pTM=0.397 ipTM=0.146 tol=3.84 2024-07-13 10:15:28,030 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=61.7 pTM=0.396 ipTM=0.145 tol=1.38 2024-07-13 10:15:45,066 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=61.8 pTM=0.395 ipTM=0.142 tol=1.28 2024-07-13 10:16:02,100 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=62 pTM=0.403 ipTM=0.146 tol=1.76 2024-07-13 10:16:19,131 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=61.7 pTM=0.394 ipTM=0.142 tol=2.15 2024-07-13 10:16:36,166 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=61.9 pTM=0.4 ipTM=0.145 tol=3.31 2024-07-13 10:16:53,206 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.2 pTM=0.405 ipTM=0.144 tol=2.81 2024-07-13 10:17:10,242 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62.3 pTM=0.4 ipTM=0.142 tol=2.68 2024-07-13 10:17:27,274 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=62.4 pTM=0.404 ipTM=0.143 tol=2.4 2024-07-13 10:17:44,302 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=62.6 pTM=0.401 ipTM=0.143 tol=1.9 2024-07-13 10:17:44,303 alphafold2_multimer_v3_model_2_seed_000 took 528.2s (30 recycles) 2024-07-13 10:18:01,889 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=59.6 pTM=0.347 ipTM=0.121 2024-07-13 10:18:18,960 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=60.6 pTM=0.369 ipTM=0.138 tol=12.9 2024-07-13 10:18:36,005 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=59.7 pTM=0.361 ipTM=0.134 tol=8.27 2024-07-13 10:18:53,014 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=60.4 pTM=0.377 ipTM=0.165 tol=6.38 2024-07-13 10:19:10,039 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=61 pTM=0.38 ipTM=0.15 tol=7.61 2024-07-13 10:19:27,047 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=61.8 pTM=0.394 ipTM=0.175 tol=4.82 2024-07-13 10:19:44,071 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=61.3 pTM=0.385 ipTM=0.146 tol=4.77 2024-07-13 10:20:01,071 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62.1 pTM=0.401 ipTM=0.18 tol=4.08 2024-07-13 10:20:18,065 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61.8 pTM=0.4 ipTM=0.175 tol=2.57 2024-07-13 10:20:35,079 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=61.2 pTM=0.392 ipTM=0.166 tol=2.54 2024-07-13 10:20:52,091 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=61.1 pTM=0.386 ipTM=0.164 tol=5.38 2024-07-13 10:21:09,112 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=61.6 pTM=0.396 ipTM=0.169 tol=4.66 2024-07-13 10:21:26,130 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=61.3 pTM=0.391 ipTM=0.163 tol=5.33 2024-07-13 10:21:43,142 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=61.4 pTM=0.392 ipTM=0.173 tol=5.01 2024-07-13 10:22:00,181 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=61.1 pTM=0.386 ipTM=0.151 tol=3.54 2024-07-13 10:22:17,193 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=61.9 pTM=0.398 ipTM=0.176 tol=2.4 2024-07-13 10:22:34,210 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=61.9 pTM=0.406 ipTM=0.172 tol=1.89 2024-07-13 10:22:51,223 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.3 pTM=0.392 ipTM=0.154 tol=7.95 2024-07-13 10:23:08,265 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.4 pTM=0.393 ipTM=0.156 tol=4.36 2024-07-13 10:23:25,281 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.5 pTM=0.4 ipTM=0.17 tol=5.14 2024-07-13 10:23:42,323 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=61.2 pTM=0.393 ipTM=0.162 tol=4.39 2024-07-13 10:23:59,358 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=61.2 pTM=0.389 ipTM=0.167 tol=4.89 2024-07-13 10:24:16,398 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61.1 pTM=0.386 ipTM=0.144 tol=2.59 2024-07-13 10:24:33,398 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=62.1 pTM=0.4 ipTM=0.181 tol=3.4 2024-07-13 10:24:50,408 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.8 pTM=0.402 ipTM=0.176 tol=1.51 2024-07-13 10:25:07,444 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.2 pTM=0.388 ipTM=0.167 tol=2.87 2024-07-13 10:25:24,491 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=61.1 pTM=0.385 ipTM=0.151 tol=2.36 2024-07-13 10:25:41,516 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=61.4 pTM=0.391 ipTM=0.164 tol=2.09 2024-07-13 10:25:58,565 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=60.7 pTM=0.379 ipTM=0.139 tol=2.1 2024-07-13 10:26:15,599 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=61.1 pTM=0.387 ipTM=0.161 tol=2.4 2024-07-13 10:26:32,628 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.7 pTM=0.384 ipTM=0.151 tol=2.72 2024-07-13 10:26:32,628 alphafold2_multimer_v3_model_3_seed_000 took 527.8s (30 recycles) 2024-07-13 10:26:50,189 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=57 pTM=0.339 ipTM=0.167 2024-07-13 10:27:07,250 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=60 pTM=0.409 ipTM=0.198 tol=27.2 2024-07-13 10:27:24,236 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=60.7 pTM=0.412 ipTM=0.194 tol=9.05 2024-07-13 10:27:41,246 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=60.8 pTM=0.413 ipTM=0.183 tol=5.96 2024-07-13 10:27:58,273 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=60.5 pTM=0.405 ipTM=0.147 tol=4.68 2024-07-13 10:28:15,322 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=60.5 pTM=0.409 ipTM=0.136 tol=4.26 2024-07-13 10:28:32,375 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=60.4 pTM=0.412 ipTM=0.136 tol=5.16 2024-07-13 10:28:49,409 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=60.4 pTM=0.411 ipTM=0.131 tol=7.49 2024-07-13 10:29:06,452 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=60.4 pTM=0.409 ipTM=0.139 tol=4.17 2024-07-13 10:29:23,480 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=60.1 pTM=0.409 ipTM=0.139 tol=4.18 2024-07-13 10:29:40,533 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=60.5 pTM=0.409 ipTM=0.14 tol=7.28 2024-07-13 10:29:57,586 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=60.7 pTM=0.42 ipTM=0.148 tol=5.73 2024-07-13 10:30:14,627 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=61 pTM=0.425 ipTM=0.156 tol=5.61 2024-07-13 10:30:31,661 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=61.2 pTM=0.425 ipTM=0.16 tol=4.74 2024-07-13 10:30:48,707 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=60.8 pTM=0.418 ipTM=0.153 tol=2.22 2024-07-13 10:31:05,750 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=60.9 pTM=0.42 ipTM=0.15 tol=3.24 2024-07-13 10:31:22,801 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=61.1 pTM=0.423 ipTM=0.15 tol=3.26 2024-07-13 10:31:39,833 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=61 pTM=0.426 ipTM=0.152 tol=1.55 2024-07-13 10:31:56,882 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=60.8 pTM=0.422 ipTM=0.152 tol=1.34 2024-07-13 10:32:13,906 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=61 pTM=0.427 ipTM=0.155 tol=3.39 2024-07-13 10:32:30,963 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=60.8 pTM=0.425 ipTM=0.151 tol=2.29 2024-07-13 10:32:48,013 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=60.3 pTM=0.418 ipTM=0.149 tol=3.68 2024-07-13 10:33:05,078 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=60.6 pTM=0.424 ipTM=0.146 tol=2.06 2024-07-13 10:33:22,123 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=60.4 pTM=0.422 ipTM=0.149 tol=1.89 2024-07-13 10:33:39,164 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=60.7 pTM=0.422 ipTM=0.149 tol=2.36 2024-07-13 10:33:56,213 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60.5 pTM=0.415 ipTM=0.15 tol=4.33 2024-07-13 10:34:13,266 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=60.8 pTM=0.422 ipTM=0.154 tol=3.74 2024-07-13 10:34:30,309 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=60.7 pTM=0.419 ipTM=0.152 tol=3.22 2024-07-13 10:34:47,359 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=60.1 pTM=0.416 ipTM=0.151 tol=3.56 2024-07-13 10:35:04,397 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=60.3 pTM=0.422 ipTM=0.15 tol=1.89 2024-07-13 10:35:21,450 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=60.5 pTM=0.422 ipTM=0.15 tol=1.3 2024-07-13 10:35:21,451 alphafold2_multimer_v3_model_4_seed_000 took 528.3s (30 recycles) 2024-07-13 10:35:39,015 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=59.2 pTM=0.359 ipTM=0.135 2024-07-13 10:35:56,051 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=60.3 pTM=0.393 ipTM=0.133 tol=28.3 2024-07-13 10:36:13,082 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=61.2 pTM=0.403 ipTM=0.139 tol=7.85 2024-07-13 10:36:30,062 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61.6 pTM=0.415 ipTM=0.148 tol=7.71 2024-07-13 10:36:47,050 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=62 pTM=0.422 ipTM=0.163 tol=6.55 2024-07-13 10:37:04,022 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=62.2 pTM=0.429 ipTM=0.173 tol=4.28 2024-07-13 10:37:20,986 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=62.5 pTM=0.433 ipTM=0.18 tol=2.72 2024-07-13 10:37:37,951 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=62.2 pTM=0.429 ipTM=0.177 tol=1.99 2024-07-13 10:37:54,911 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=62.6 pTM=0.438 ipTM=0.186 tol=1.49 2024-07-13 10:38:11,883 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=62.4 pTM=0.434 ipTM=0.184 tol=1.68 2024-07-13 10:38:28,839 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=62.6 pTM=0.435 ipTM=0.197 tol=1.9 2024-07-13 10:38:45,831 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=62.6 pTM=0.433 ipTM=0.193 tol=1.41 2024-07-13 10:39:02,796 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=62.5 pTM=0.438 ipTM=0.195 tol=2.46 2024-07-13 10:39:19,789 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=62.6 pTM=0.436 ipTM=0.191 tol=2.3 2024-07-13 10:39:36,772 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=62.3 pTM=0.433 ipTM=0.194 tol=2.28 2024-07-13 10:39:53,717 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=62.5 pTM=0.438 ipTM=0.211 tol=2.08 2024-07-13 10:40:10,678 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=62.9 pTM=0.442 ipTM=0.209 tol=1.7 2024-07-13 10:40:27,632 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=62.7 pTM=0.436 ipTM=0.203 tol=1.65 2024-07-13 10:40:44,583 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=62.6 pTM=0.438 ipTM=0.205 tol=1.38 2024-07-13 10:41:01,534 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=62.7 pTM=0.44 ipTM=0.213 tol=2.45 2024-07-13 10:41:18,471 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=62.6 pTM=0.438 ipTM=0.213 tol=2.09 2024-07-13 10:41:35,409 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=62.6 pTM=0.438 ipTM=0.212 tol=2.91 2024-07-13 10:41:52,353 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=62.7 pTM=0.438 ipTM=0.206 tol=2.24 2024-07-13 10:42:09,292 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=62.8 pTM=0.444 ipTM=0.217 tol=2.31 2024-07-13 10:42:26,239 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=62.7 pTM=0.439 ipTM=0.208 tol=2.4 2024-07-13 10:42:43,178 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=62.6 pTM=0.438 ipTM=0.223 tol=1.73 2024-07-13 10:43:00,116 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=62.5 pTM=0.443 ipTM=0.224 tol=1.53 2024-07-13 10:43:17,057 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=63 pTM=0.446 ipTM=0.231 tol=1.69 2024-07-13 10:43:34,005 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=62.4 pTM=0.442 ipTM=0.223 tol=1.65 2024-07-13 10:43:50,954 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=62.7 pTM=0.442 ipTM=0.223 tol=1.4 2024-07-13 10:44:07,897 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=62.4 pTM=0.438 ipTM=0.208 tol=2.38 2024-07-13 10:44:07,898 alphafold2_multimer_v3_model_5_seed_000 took 525.9s (30 recycles) 2024-07-13 10:44:08,405 reranking models by 'multimer' metric 2024-07-13 10:44:11,380 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-13 10:45:12,703 Relaxation took 64.3s 2024-07-13 10:45:12,703 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=62.4 pTM=0.438 ipTM=0.208 2024-07-13 10:46:30,511 Relaxation took 77.8s 2024-07-13 10:46:30,511 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=60.5 pTM=0.422 ipTM=0.15 2024-07-13 10:47:39,064 Relaxation took 68.6s 2024-07-13 10:47:39,064 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.7 pTM=0.384 ipTM=0.151 2024-07-13 10:48:32,323 Relaxation took 53.3s 2024-07-13 10:48:32,323 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=62.6 pTM=0.401 ipTM=0.143 2024-07-13 10:49:53,754 Relaxation took 81.4s 2024-07-13 10:49:53,755 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=62.7 pTM=0.415 ipTM=0.137 2024-07-13 10:49:55,298 Done