2024-07-13 10:59:40,019 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 10:59:40,330 Running on GPU
2024-07-13 10:59:50,743 Found 6 citations for tools or databases
2024-07-13 10:59:50,743 Query 1/1: TAD2A_LCE1D (length 557)
2024-07-13 10:59:51,209 Sleeping for 5s. Reason: PENDING
2024-07-13 10:59:56,637 Sleeping for 8s. Reason: RUNNING
2024-07-13 11:00:05,073 Sleeping for 7s. Reason: RUNNING
2024-07-13 11:00:12,494 Sleeping for 8s. Reason: RUNNING
2024-07-13 11:00:20,902 Sleeping for 5s. Reason: RUNNING
2024-07-13 11:00:26,317 Sleeping for 7s. Reason: RUNNING
2024-07-13 11:00:33,736 Sleeping for 5s. Reason: RUNNING
2024-07-13 11:00:39,171 Sleeping for 6s. Reason: RUNNING
2024-07-13 11:00:47,118 Sleeping for 10s. Reason: PENDING
2024-07-13 11:00:57,538 Sleeping for 7s. Reason: RUNNING
2024-07-13 11:01:04,966 Sleeping for 7s. Reason: RUNNING
2024-07-13 11:01:13,975 Setting max_seq=508, max_extra_seq=1928
2024-07-13 11:04:59,332 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=65.4 pTM=0.317 ipTM=0.0814
2024-07-13 11:05:07,000 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=65.1 pTM=0.314 ipTM=0.0886 tol=11.3
2024-07-13 11:05:14,651 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=65.6 pTM=0.32 ipTM=0.0916 tol=5.45
2024-07-13 11:05:22,302 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=65.4 pTM=0.32 ipTM=0.0934 tol=2.57
2024-07-13 11:05:29,954 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=66 pTM=0.324 ipTM=0.0931 tol=3.25
2024-07-13 11:05:37,621 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66.1 pTM=0.327 ipTM=0.0923 tol=2.04
2024-07-13 11:05:45,285 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=66.1 pTM=0.327 ipTM=0.0932 tol=2.96
2024-07-13 11:05:52,944 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=66.1 pTM=0.325 ipTM=0.0926 tol=1.91
2024-07-13 11:06:00,617 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.2 pTM=0.327 ipTM=0.0927 tol=1.82
2024-07-13 11:06:08,286 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=66.2 pTM=0.325 ipTM=0.093 tol=1.21
2024-07-13 11:06:15,955 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=66.3 pTM=0.326 ipTM=0.0942 tol=1.37
2024-07-13 11:06:23,616 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66.3 pTM=0.327 ipTM=0.0958 tol=1.43
2024-07-13 11:06:31,281 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=66.4 pTM=0.327 ipTM=0.0946 tol=1.53
2024-07-13 11:06:38,942 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=66.6 pTM=0.327 ipTM=0.0955 tol=1.21
2024-07-13 11:06:46,609 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=66.6 pTM=0.328 ipTM=0.0938 tol=0.979
2024-07-13 11:06:54,277 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=66.5 pTM=0.328 ipTM=0.0935 tol=1.02
2024-07-13 11:07:01,946 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=66.6 pTM=0.328 ipTM=0.0943 tol=1.27
2024-07-13 11:07:09,619 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=66.8 pTM=0.329 ipTM=0.0927 tol=1.89
2024-07-13 11:07:17,310 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=66.4 pTM=0.326 ipTM=0.0934 tol=1.53
2024-07-13 11:07:24,982 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=66.5 pTM=0.327 ipTM=0.092 tol=2.21
2024-07-13 11:07:32,659 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=66.4 pTM=0.326 ipTM=0.0925 tol=1.55
2024-07-13 11:07:40,328 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.8 pTM=0.328 ipTM=0.0923 tol=1.63
2024-07-13 11:07:48,000 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=66.6 pTM=0.327 ipTM=0.0911 tol=1.38
2024-07-13 11:07:55,674 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66.6 pTM=0.328 ipTM=0.092 tol=1.39
2024-07-13 11:08:03,353 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=66.8 pTM=0.33 ipTM=0.0937 tol=1.38
2024-07-13 11:08:11,029 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=66.6 pTM=0.326 ipTM=0.093 tol=1.58
2024-07-13 11:08:18,710 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=66.6 pTM=0.327 ipTM=0.0928 tol=1.64
2024-07-13 11:08:26,389 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=66.6 pTM=0.328 ipTM=0.0936 tol=1.25
2024-07-13 11:08:34,064 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=66.7 pTM=0.329 ipTM=0.0942 tol=1.41
2024-07-13 11:08:41,738 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.6 pTM=0.329 ipTM=0.095 tol=0.962
2024-07-13 11:08:49,416 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=66.6 pTM=0.329 ipTM=0.0937 tol=1.21
2024-07-13 11:08:49,416 alphafold2_multimer_v3_model_1_seed_000 took 407.0s (30 recycles)
2024-07-13 11:08:57,312 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=63.4 pTM=0.32 ipTM=0.087
2024-07-13 11:09:04,992 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=64.4 pTM=0.328 ipTM=0.102 tol=9.09
2024-07-13 11:09:12,677 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=64.2 pTM=0.323 ipTM=0.102 tol=6.08
2024-07-13 11:09:20,356 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=64.4 pTM=0.324 ipTM=0.102 tol=3.13
2024-07-13 11:09:28,038 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=64.8 pTM=0.326 ipTM=0.104 tol=2.22
2024-07-13 11:09:35,717 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=65.1 pTM=0.33 ipTM=0.103 tol=1.52
2024-07-13 11:09:43,403 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=65 pTM=0.329 ipTM=0.103 tol=1.33
2024-07-13 11:09:51,084 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=64.8 pTM=0.327 ipTM=0.102 tol=1.15
2024-07-13 11:09:58,769 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=65.1 pTM=0.329 ipTM=0.102 tol=1.91
2024-07-13 11:10:06,446 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=65.2 pTM=0.329 ipTM=0.1 tol=1
2024-07-13 11:10:14,127 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=65.2 pTM=0.33 ipTM=0.102 tol=1.56
2024-07-13 11:10:21,804 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=65.2 pTM=0.329 ipTM=0.101 tol=1.54
2024-07-13 11:10:29,486 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=65.1 pTM=0.328 ipTM=0.1 tol=1.5
2024-07-13 11:10:37,160 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=65.3 pTM=0.329 ipTM=0.0997 tol=1.45
2024-07-13 11:10:44,842 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=65.2 pTM=0.329 ipTM=0.0984 tol=1.35
2024-07-13 11:10:52,529 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=64.9 pTM=0.327 ipTM=0.097 tol=0.89
2024-07-13 11:11:00,208 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=65.1 pTM=0.328 ipTM=0.0975 tol=1.55
2024-07-13 11:11:07,889 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=65.1 pTM=0.329 ipTM=0.0969 tol=0.975
2024-07-13 11:11:15,572 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64.9 pTM=0.325 ipTM=0.0962 tol=1.54
2024-07-13 11:11:23,255 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=64.8 pTM=0.326 ipTM=0.0976 tol=1.25
2024-07-13 11:11:30,938 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64.8 pTM=0.325 ipTM=0.0963 tol=1.52
2024-07-13 11:11:38,627 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=65.2 pTM=0.328 ipTM=0.097 tol=1.2
2024-07-13 11:11:46,313 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=64.8 pTM=0.324 ipTM=0.0969 tol=0.984
2024-07-13 11:11:53,996 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=64.9 pTM=0.326 ipTM=0.0983 tol=1.01
2024-07-13 11:12:01,678 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=64.9 pTM=0.325 ipTM=0.0991 tol=0.804
2024-07-13 11:12:09,360 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=65 pTM=0.324 ipTM=0.0986 tol=1.25
2024-07-13 11:12:17,044 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=64.6 pTM=0.322 ipTM=0.0955 tol=1.21
2024-07-13 11:12:24,725 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=64.8 pTM=0.324 ipTM=0.0959 tol=1.82
2024-07-13 11:12:32,402 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=64.8 pTM=0.326 ipTM=0.0978 tol=1.6
2024-07-13 11:12:40,082 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65.1 pTM=0.327 ipTM=0.099 tol=1.9
2024-07-13 11:12:47,758 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=65.2 pTM=0.329 ipTM=0.0994 tol=1.52
2024-07-13 11:12:47,758 alphafold2_multimer_v3_model_2_seed_000 took 238.1s (30 recycles)
2024-07-13 11:12:55,700 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=64.3 pTM=0.318 ipTM=0.0881
2024-07-13 11:13:03,404 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=64.8 pTM=0.319 ipTM=0.0956 tol=14.3
2024-07-13 11:13:11,091 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=64.2 pTM=0.319 ipTM=0.0981 tol=4.92
2024-07-13 11:13:18,784 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=64.2 pTM=0.32 ipTM=0.0948 tol=3.94
2024-07-13 11:13:26,481 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=64.3 pTM=0.32 ipTM=0.0995 tol=2.09
2024-07-13 11:13:34,184 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=64.3 pTM=0.319 ipTM=0.0967 tol=2.28
2024-07-13 11:13:41,887 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=64.2 pTM=0.319 ipTM=0.0956 tol=1.39
2024-07-13 11:13:49,589 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=64.1 pTM=0.317 ipTM=0.0976 tol=1.3
2024-07-13 11:13:57,289 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=64.1 pTM=0.319 ipTM=0.0968 tol=1.2
2024-07-13 11:14:04,989 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=64.3 pTM=0.318 ipTM=0.0973 tol=2.21
2024-07-13 11:14:12,693 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=64.7 pTM=0.322 ipTM=0.0989 tol=1.38
2024-07-13 11:14:20,400 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=64.6 pTM=0.322 ipTM=0.0996 tol=1.18
2024-07-13 11:14:28,103 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=64.6 pTM=0.318 ipTM=0.0962 tol=1.47
2024-07-13 11:14:35,809 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=64.7 pTM=0.321 ipTM=0.0974 tol=1.96
2024-07-13 11:14:43,513 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=64.7 pTM=0.322 ipTM=0.099 tol=1.55
2024-07-13 11:14:51,213 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=64.4 pTM=0.32 ipTM=0.0993 tol=1.38
2024-07-13 11:14:58,904 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=64.3 pTM=0.321 ipTM=0.102 tol=1.34
2024-07-13 11:15:06,599 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=64.8 pTM=0.323 ipTM=0.102 tol=1.27
2024-07-13 11:15:14,296 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=64.6 pTM=0.323 ipTM=0.103 tol=1.03
2024-07-13 11:15:21,994 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=64.8 pTM=0.324 ipTM=0.102 tol=1.52
2024-07-13 11:15:29,695 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=64.7 pTM=0.323 ipTM=0.101 tol=1.26
2024-07-13 11:15:37,396 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=64.9 pTM=0.323 ipTM=0.0998 tol=1.57
2024-07-13 11:15:45,082 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=64.9 pTM=0.323 ipTM=0.0978 tol=1.56
2024-07-13 11:15:52,789 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=64.7 pTM=0.323 ipTM=0.1 tol=1.5
2024-07-13 11:16:00,494 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=65.1 pTM=0.327 ipTM=0.0988 tol=1.43
2024-07-13 11:16:08,188 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=64.9 pTM=0.325 ipTM=0.0952 tol=1.42
2024-07-13 11:16:15,883 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=65 pTM=0.329 ipTM=0.0992 tol=1.49
2024-07-13 11:16:23,588 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=65.4 pTM=0.331 ipTM=0.101 tol=1.28
2024-07-13 11:16:31,280 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=65.4 pTM=0.332 ipTM=0.101 tol=0.886
2024-07-13 11:16:38,972 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=65.4 pTM=0.331 ipTM=0.101 tol=1.45
2024-07-13 11:16:46,678 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=65.5 pTM=0.333 ipTM=0.105 tol=1.2
2024-07-13 11:16:46,678 alphafold2_multimer_v3_model_3_seed_000 took 238.7s (30 recycles)
2024-07-13 11:16:54,595 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=63.6 pTM=0.31 ipTM=0.085
2024-07-13 11:17:02,281 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=64.6 pTM=0.325 ipTM=0.102 tol=7.66
2024-07-13 11:17:09,969 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=64.2 pTM=0.325 ipTM=0.107 tol=4.45
2024-07-13 11:17:17,656 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64.3 pTM=0.323 ipTM=0.107 tol=4.42
2024-07-13 11:17:25,343 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64.4 pTM=0.323 ipTM=0.107 tol=2.81
2024-07-13 11:17:33,036 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=64.8 pTM=0.326 ipTM=0.105 tol=2.04
2024-07-13 11:17:40,735 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=64.8 pTM=0.325 ipTM=0.104 tol=1.29
2024-07-13 11:17:48,428 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.3 pTM=0.323 ipTM=0.104 tol=2.38
2024-07-13 11:17:56,120 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64.7 pTM=0.324 ipTM=0.105 tol=2.24
2024-07-13 11:18:03,810 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=64.4 pTM=0.321 ipTM=0.106 tol=1.76
2024-07-13 11:18:11,503 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=64.6 pTM=0.322 ipTM=0.106 tol=1.46
2024-07-13 11:18:19,191 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=64.8 pTM=0.325 ipTM=0.109 tol=1.66
2024-07-13 11:18:26,880 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=64.5 pTM=0.322 ipTM=0.108 tol=1.82
2024-07-13 11:18:34,569 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64.8 pTM=0.324 ipTM=0.11 tol=1.65
2024-07-13 11:18:42,248 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64.8 pTM=0.325 ipTM=0.109 tol=1.56
2024-07-13 11:18:49,939 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64.6 pTM=0.325 ipTM=0.109 tol=0.886
2024-07-13 11:18:57,629 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=64.6 pTM=0.325 ipTM=0.112 tol=0.818
2024-07-13 11:19:05,322 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=64.9 pTM=0.327 ipTM=0.112 tol=1.92
2024-07-13 11:19:13,016 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=64.3 pTM=0.324 ipTM=0.111 tol=1.55
2024-07-13 11:19:20,708 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.9 pTM=0.326 ipTM=0.114 tol=1.43
2024-07-13 11:19:28,400 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.4 pTM=0.325 ipTM=0.114 tol=1.28
2024-07-13 11:19:36,091 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=64.7 pTM=0.327 ipTM=0.116 tol=1.85
2024-07-13 11:19:43,781 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=64.4 pTM=0.323 ipTM=0.115 tol=2.43
2024-07-13 11:19:51,472 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=64.4 pTM=0.324 ipTM=0.117 tol=1.13
2024-07-13 11:19:59,162 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=64.8 pTM=0.327 ipTM=0.115 tol=1.52
2024-07-13 11:20:06,853 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64.6 pTM=0.325 ipTM=0.113 tol=1.63
2024-07-13 11:20:14,546 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64.7 pTM=0.325 ipTM=0.114 tol=1.97
2024-07-13 11:20:22,238 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64.6 pTM=0.325 ipTM=0.114 tol=1.34
2024-07-13 11:20:29,931 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=64.6 pTM=0.325 ipTM=0.114 tol=1.46
2024-07-13 11:20:37,620 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=64.8 pTM=0.327 ipTM=0.112 tol=2.12
2024-07-13 11:20:45,309 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=64.7 pTM=0.326 ipTM=0.11 tol=1.96
2024-07-13 11:20:45,309 alphafold2_multimer_v3_model_4_seed_000 took 238.4s (30 recycles)
2024-07-13 11:20:53,225 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=61.4 pTM=0.304 ipTM=0.088
2024-07-13 11:21:00,913 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=61.8 pTM=0.306 ipTM=0.0956 tol=12.6
2024-07-13 11:21:08,594 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=62 pTM=0.312 ipTM=0.0955 tol=6.53
2024-07-13 11:21:16,270 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=62.5 pTM=0.317 ipTM=0.0955 tol=2.9
2024-07-13 11:21:23,953 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=62.7 pTM=0.317 ipTM=0.1 tol=1.64
2024-07-13 11:21:31,633 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=63 pTM=0.318 ipTM=0.0991 tol=2.33
2024-07-13 11:21:39,312 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=62.8 pTM=0.316 ipTM=0.1 tol=2.18
2024-07-13 11:21:46,993 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=62.8 pTM=0.317 ipTM=0.0975 tol=1.6
2024-07-13 11:21:54,674 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=63.5 pTM=0.323 ipTM=0.0961 tol=1.85
2024-07-13 11:22:02,356 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=63.1 pTM=0.319 ipTM=0.0958 tol=1.93
2024-07-13 11:22:10,040 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=63.1 pTM=0.318 ipTM=0.0958 tol=1.43
2024-07-13 11:22:17,720 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=63.3 pTM=0.322 ipTM=0.0955 tol=1.52
2024-07-13 11:22:25,398 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=63.3 pTM=0.319 ipTM=0.101 tol=1.25
2024-07-13 11:22:33,078 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=61.5 pTM=0.322 ipTM=0.0934 tol=14.9
2024-07-13 11:22:40,755 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=63 pTM=0.324 ipTM=0.0972 tol=13.6
2024-07-13 11:22:48,434 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=63 pTM=0.321 ipTM=0.0992 tol=6.02
2024-07-13 11:22:56,107 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=63 pTM=0.318 ipTM=0.0969 tol=2.63
2024-07-13 11:23:03,784 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=63.4 pTM=0.32 ipTM=0.0979 tol=2.09
2024-07-13 11:23:11,463 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=62.9 pTM=0.315 ipTM=0.101 tol=2.23
2024-07-13 11:23:19,140 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=63.1 pTM=0.316 ipTM=0.1 tol=1.3
2024-07-13 11:23:26,819 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=63.2 pTM=0.318 ipTM=0.102 tol=1.69
2024-07-13 11:23:34,501 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=63.3 pTM=0.318 ipTM=0.0994 tol=2.36
2024-07-13 11:23:42,180 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=63.2 pTM=0.317 ipTM=0.0972 tol=3.46
2024-07-13 11:23:49,858 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=63 pTM=0.317 ipTM=0.0941 tol=3.39
2024-07-13 11:23:57,535 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=63.7 pTM=0.323 ipTM=0.0983 tol=2.97
2024-07-13 11:24:05,216 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=63.6 pTM=0.322 ipTM=0.0969 tol=1.94
2024-07-13 11:24:12,898 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=63.3 pTM=0.32 ipTM=0.1 tol=2.31
2024-07-13 11:24:20,577 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=63.3 pTM=0.32 ipTM=0.1 tol=1.53
2024-07-13 11:24:28,257 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=63.3 pTM=0.319 ipTM=0.0971 tol=1.61
2024-07-13 11:24:35,939 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=63.1 pTM=0.319 ipTM=0.0991 tol=1.64
2024-07-13 11:24:43,620 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=63.5 pTM=0.323 ipTM=0.0956 tol=1.84
2024-07-13 11:24:43,621 alphafold2_multimer_v3_model_5_seed_000 took 238.1s (30 recycles)
2024-07-13 11:24:43,833 reranking models by 'multimer' metric
2024-07-13 11:24:44,611 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-13 11:25:12,457 Relaxation took 28.6s
2024-07-13 11:25:12,458 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=64.7 pTM=0.326 ipTM=0.11
2024-07-13 11:25:50,184 Relaxation took 37.7s
2024-07-13 11:25:50,184 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=65.5 pTM=0.333 ipTM=0.105
2024-07-13 11:26:25,301 Relaxation took 35.1s
2024-07-13 11:26:25,301 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=65.2 pTM=0.329 ipTM=0.0994
2024-07-13 11:26:47,404 Relaxation took 22.1s
2024-07-13 11:26:47,404 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=63.5 pTM=0.323 ipTM=0.0956
2024-07-13 11:27:07,760 Relaxation took 20.4s
2024-07-13 11:27:07,760 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=66.6 pTM=0.329 ipTM=0.0937
2024-07-13 11:27:09,177 Done