2024-07-13 11:08:46,910 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 11:08:47,230 Running on GPU
2024-07-13 11:08:59,782 Found 6 citations for tools or databases
2024-07-13 11:08:59,782 Query 1/1: TARSH_PCSK5 (length 2928)
2024-07-13 11:09:00,239 Sleeping for 9s. Reason: PENDING
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2024-07-13 11:14:51,950 Sleeping for 8s. Reason: RUNNING
2024-07-13 11:15:07,963 Sleeping for 5s. Reason: PENDING
2024-07-13 11:15:13,374 Sleeping for 10s. Reason: RUNNING
2024-07-13 11:15:23,803 Sleeping for 10s. Reason: RUNNING
2024-07-13 11:15:34,248 Sleeping for 5s. Reason: RUNNING
2024-07-13 11:15:39,661 Sleeping for 10s. Reason: RUNNING
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2024-07-13 11:16:05,974 Sleeping for 8s. Reason: RUNNING
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2024-07-13 11:16:19,823 Sleeping for 10s. Reason: RUNNING
2024-07-13 11:16:30,246 Sleeping for 9s. Reason: RUNNING
2024-07-13 11:16:39,665 Sleeping for 9s. Reason: RUNNING
2024-07-13 11:16:49,093 Sleeping for 10s. Reason: RUNNING
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2024-07-13 11:17:37,236 Sleeping for 5s. Reason: RUNNING
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2024-07-13 11:17:51,109 Sleeping for 7s. Reason: RUNNING
2024-07-13 11:17:58,535 Sleeping for 10s. Reason: RUNNING
2024-07-13 11:18:08,970 Sleeping for 7s. Reason: RUNNING
2024-07-13 11:18:16,393 Sleeping for 5s. Reason: RUNNING
2024-07-13 11:18:21,823 Sleeping for 5s. Reason: RUNNING
2024-07-13 11:18:27,245 Sleeping for 6s. Reason: RUNNING
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2024-07-13 11:18:41,073 Sleeping for 7s. Reason: RUNNING
2024-07-13 11:18:56,510 Setting max_seq=508, max_extra_seq=2048
2024-07-13 11:30:16,158 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=47.3 pTM=0.37 ipTM=0.237
2024-07-13 11:38:14,980 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=51.4 pTM=0.371 ipTM=0.243 tol=26.9
2024-07-13 11:46:13,492 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=51.9 pTM=0.369 ipTM=0.237 tol=15.3
2024-07-13 11:54:12,287 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=54.1 pTM=0.37 ipTM=0.254 tol=17.3
2024-07-13 12:02:10,982 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=54 pTM=0.37 ipTM=0.25 tol=12.4
2024-07-13 12:10:09,716 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=53.6 pTM=0.368 ipTM=0.243 tol=11.6
2024-07-13 12:18:08,279 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=53.6 pTM=0.367 ipTM=0.242 tol=9.89
2024-07-13 12:26:06,794 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=53.7 pTM=0.368 ipTM=0.245 tol=6.02
2024-07-13 12:34:05,377 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=53.5 pTM=0.367 ipTM=0.243 tol=8.94
2024-07-13 12:42:03,908 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=53.6 pTM=0.366 ipTM=0.244 tol=7.27
2024-07-13 12:50:02,460 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=53.2 pTM=0.366 ipTM=0.242 tol=6.13
2024-07-13 12:58:01,149 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=53.3 pTM=0.365 ipTM=0.241 tol=7.09
2024-07-13 13:05:59,930 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=53.6 pTM=0.366 ipTM=0.241 tol=6.94
2024-07-13 13:13:58,556 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=53.6 pTM=0.366 ipTM=0.239 tol=9.35
2024-07-13 13:21:57,138 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=53.3 pTM=0.365 ipTM=0.241 tol=8.37
2024-07-13 13:29:55,914 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=53.6 pTM=0.366 ipTM=0.239 tol=10.7
2024-07-13 13:37:54,458 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=53.4 pTM=0.365 ipTM=0.241 tol=7.36
2024-07-13 13:45:53,136 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=53.9 pTM=0.366 ipTM=0.24 tol=3.93
2024-07-13 13:53:51,660 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=53.8 pTM=0.365 ipTM=0.239 tol=10.4
2024-07-13 14:01:50,555 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=53.9 pTM=0.367 ipTM=0.239 tol=11.2
2024-07-13 14:09:49,301 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=54 pTM=0.366 ipTM=0.24 tol=4.68
2024-07-13 14:17:48,045 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=53.8 pTM=0.366 ipTM=0.24 tol=11.1
2024-07-13 14:25:46,701 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=54 pTM=0.366 ipTM=0.241 tol=8.51
2024-07-13 14:33:45,262 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=53.8 pTM=0.366 ipTM=0.243 tol=11.3
2024-07-13 14:41:43,758 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=53.6 pTM=0.366 ipTM=0.243 tol=5.9
2024-07-13 14:49:42,160 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=53.5 pTM=0.366 ipTM=0.241 tol=6.82
2024-07-13 14:57:40,573 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=53.5 pTM=0.366 ipTM=0.242 tol=3.75
2024-07-13 15:05:38,950 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=53.7 pTM=0.366 ipTM=0.241 tol=6.1
2024-07-13 15:13:37,363 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=53.5 pTM=0.366 ipTM=0.242 tol=4.97
2024-07-13 15:21:35,755 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=53.8 pTM=0.367 ipTM=0.242 tol=2.28
2024-07-13 15:29:34,136 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=53.5 pTM=0.366 ipTM=0.243 tol=2.68
2024-07-13 15:29:34,140 alphafold2_multimer_v3_model_1_seed_000 took 14971.1s (30 recycles)
2024-07-13 15:37:38,823 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=49.1 pTM=0.366 ipTM=0.246
2024-07-13 15:45:37,388 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=52.8 pTM=0.377 ipTM=0.258 tol=25.1
2024-07-13 15:53:35,877 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=54.7 pTM=0.374 ipTM=0.248 tol=13
2024-07-13 16:01:34,122 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=55.2 pTM=0.378 ipTM=0.257 tol=15.2
2024-07-13 16:09:32,362 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=55.9 pTM=0.375 ipTM=0.245 tol=9.33
2024-07-13 16:17:30,587 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=56.1 pTM=0.374 ipTM=0.24 tol=9.13
2024-07-13 16:25:29,047 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=56.2 pTM=0.374 ipTM=0.237 tol=5.76
2024-07-13 16:33:27,510 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=56.3 pTM=0.373 ipTM=0.238 tol=4.47
2024-07-13 16:41:25,841 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=56.3 pTM=0.373 ipTM=0.237 tol=4.49
2024-07-13 16:49:24,180 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=57 pTM=0.371 ipTM=0.234 tol=7.39
2024-07-13 16:57:22,580 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=57.1 pTM=0.372 ipTM=0.236 tol=5.33
2024-07-13 17:05:20,968 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=57.1 pTM=0.372 ipTM=0.237 tol=4.55
2024-07-13 17:13:19,316 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=57.4 pTM=0.372 ipTM=0.239 tol=4.24
2024-07-13 17:21:17,667 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=57.5 pTM=0.374 ipTM=0.24 tol=6.36
2024-07-13 17:29:16,005 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=57.5 pTM=0.372 ipTM=0.24 tol=6.11
2024-07-13 17:37:14,297 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=57.7 pTM=0.372 ipTM=0.241 tol=4.95
2024-07-13 17:45:12,593 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=57.5 pTM=0.373 ipTM=0.243 tol=6.01
2024-07-13 17:53:10,886 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=57.8 pTM=0.372 ipTM=0.244 tol=5.31
2024-07-13 18:01:09,078 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=57.8 pTM=0.373 ipTM=0.245 tol=3.33
2024-07-13 18:09:07,188 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=57.8 pTM=0.372 ipTM=0.245 tol=4.46
2024-07-13 18:17:05,414 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=57.9 pTM=0.372 ipTM=0.245 tol=3.87
2024-07-13 18:25:03,665 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=57.8 pTM=0.371 ipTM=0.246 tol=4.08
2024-07-13 18:33:01,982 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=57.8 pTM=0.372 ipTM=0.248 tol=3.82
2024-07-13 18:41:00,173 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=58 pTM=0.372 ipTM=0.249 tol=4.02
2024-07-13 18:48:58,356 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=57.8 pTM=0.373 ipTM=0.249 tol=3.62
2024-07-13 18:56:56,664 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=57.7 pTM=0.373 ipTM=0.248 tol=3.36
2024-07-13 19:04:54,915 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=57.7 pTM=0.373 ipTM=0.249 tol=4.78
2024-07-13 19:12:53,224 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=57.8 pTM=0.373 ipTM=0.249 tol=6.31
2024-07-13 19:20:51,409 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=57.8 pTM=0.373 ipTM=0.25 tol=5.79
2024-07-13 19:28:49,574 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=57.8 pTM=0.375 ipTM=0.248 tol=6.77
2024-07-13 19:36:47,760 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=57.8 pTM=0.373 ipTM=0.251 tol=4.11
2024-07-13 19:36:47,765 alphafold2_multimer_v3_model_2_seed_000 took 14828.2s (30 recycles)
2024-07-13 19:44:53,751 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=44.5 pTM=0.36 ipTM=0.243
2024-07-13 19:52:53,988 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=49.2 pTM=0.365 ipTM=0.243 tol=24
2024-07-13 20:00:53,538 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=51.1 pTM=0.37 ipTM=0.241 tol=12.2
2024-07-13 20:08:52,897 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=50.9 pTM=0.37 ipTM=0.238 tol=9.66
2024-07-13 20:16:52,270 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=51.6 pTM=0.368 ipTM=0.238 tol=10
2024-07-13 20:24:51,437 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=51.6 pTM=0.37 ipTM=0.239 tol=7.64
2024-07-13 20:32:50,665 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=51.6 pTM=0.366 ipTM=0.235 tol=8.57
2024-07-13 20:40:50,005 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=52.9 pTM=0.366 ipTM=0.235 tol=8.84
2024-07-13 20:48:49,357 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=52.9 pTM=0.365 ipTM=0.239 tol=7.23
2024-07-13 20:56:48,704 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=53.3 pTM=0.365 ipTM=0.235 tol=7.62
2024-07-13 21:04:48,006 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=53.3 pTM=0.365 ipTM=0.235 tol=8.57
2024-07-13 21:12:47,239 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=53.5 pTM=0.365 ipTM=0.236 tol=6.91
2024-07-13 21:20:46,203 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=53.7 pTM=0.366 ipTM=0.237 tol=6.49
2024-07-13 21:28:45,284 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=53.7 pTM=0.366 ipTM=0.236 tol=5.16
2024-07-13 21:36:44,309 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=53.9 pTM=0.367 ipTM=0.24 tol=3.96
2024-07-13 21:44:43,269 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=54 pTM=0.368 ipTM=0.25 tol=4.32
2024-07-13 21:52:42,254 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=54 pTM=0.369 ipTM=0.252 tol=3.57
2024-07-13 22:00:41,289 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=54.4 pTM=0.369 ipTM=0.254 tol=2.95
2024-07-13 22:08:40,290 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=54.4 pTM=0.37 ipTM=0.254 tol=3.89
2024-07-13 22:16:39,285 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=54.1 pTM=0.369 ipTM=0.252 tol=3.83
2024-07-13 22:24:38,390 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=54.3 pTM=0.37 ipTM=0.254 tol=4.78
2024-07-13 22:32:37,317 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=54.2 pTM=0.37 ipTM=0.255 tol=5.82
2024-07-13 22:40:36,270 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=54.2 pTM=0.37 ipTM=0.252 tol=5.71
2024-07-13 22:48:35,345 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=54.5 pTM=0.37 ipTM=0.254 tol=3.29
2024-07-13 22:56:34,371 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=54.3 pTM=0.369 ipTM=0.252 tol=3.21
2024-07-13 23:04:33,441 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54.4 pTM=0.369 ipTM=0.255 tol=3.04
2024-07-13 23:12:32,420 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=54.3 pTM=0.37 ipTM=0.255 tol=3.04
2024-07-13 23:20:31,447 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=54.3 pTM=0.37 ipTM=0.255 tol=3.06
2024-07-13 23:28:30,476 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=54.3 pTM=0.369 ipTM=0.258 tol=3.01
2024-07-13 23:36:29,403 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=54.5 pTM=0.371 ipTM=0.257 tol=5.45
2024-07-13 23:44:28,172 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=54.7 pTM=0.37 ipTM=0.261 tol=4.8
2024-07-13 23:44:28,176 alphafold2_multimer_v3_model_3_seed_000 took 14854.9s (30 recycles)
2024-07-13 23:52:34,894 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=46.7 pTM=0.362 ipTM=0.231
2024-07-14 00:00:35,584 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=49 pTM=0.364 ipTM=0.232 tol=24.6
2024-07-14 00:08:35,670 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=50.5 pTM=0.364 ipTM=0.233 tol=18.8
2024-07-14 00:16:36,173 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=51 pTM=0.362 ipTM=0.236 tol=24
2024-07-14 00:24:36,320 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=51.2 pTM=0.362 ipTM=0.237 tol=13.6
2024-07-14 00:32:36,590 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=52.2 pTM=0.36 ipTM=0.25 tol=22.1
2024-07-14 00:40:36,818 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=51.8 pTM=0.362 ipTM=0.24 tol=13.4
2024-07-14 00:48:38,904 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=52.3 pTM=0.365 ipTM=0.243 tol=13.5
2024-07-14 00:56:38,926 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=51.6 pTM=0.362 ipTM=0.24 tol=13.4
2024-07-14 01:04:38,867 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=51.8 pTM=0.363 ipTM=0.241 tol=12.2
2024-07-14 01:12:38,863 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=51.9 pTM=0.363 ipTM=0.241 tol=9.5
2024-07-14 01:20:38,698 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=52 pTM=0.364 ipTM=0.244 tol=9.62
2024-07-14 01:28:38,553 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=52.4 pTM=0.363 ipTM=0.242 tol=8.44
2024-07-14 01:36:38,344 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=52.2 pTM=0.365 ipTM=0.243 tol=11.8
2024-07-14 01:44:38,214 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=52.2 pTM=0.365 ipTM=0.244 tol=10.5
2024-07-14 01:52:38,163 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=52.4 pTM=0.365 ipTM=0.245 tol=5.36
2024-07-14 02:00:38,126 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=52.3 pTM=0.365 ipTM=0.245 tol=5.92
2024-07-14 02:08:38,014 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=52.7 pTM=0.364 ipTM=0.245 tol=6.05
2024-07-14 02:16:38,088 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=52.8 pTM=0.366 ipTM=0.244 tol=6.89
2024-07-14 02:24:37,983 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=52.7 pTM=0.366 ipTM=0.245 tol=5.59
2024-07-14 02:32:37,843 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=53 pTM=0.367 ipTM=0.247 tol=6.64
2024-07-14 02:40:37,763 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=52.6 pTM=0.365 ipTM=0.242 tol=8.34
2024-07-14 02:48:37,736 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=52.9 pTM=0.365 ipTM=0.245 tol=8.88
2024-07-14 02:56:37,549 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=52.8 pTM=0.365 ipTM=0.245 tol=8.15
2024-07-14 03:04:37,262 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=52.7 pTM=0.367 ipTM=0.244 tol=9.55
2024-07-14 03:12:36,890 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=52.7 pTM=0.367 ipTM=0.246 tol=7.49
2024-07-14 03:20:36,556 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=52.7 pTM=0.366 ipTM=0.242 tol=6.44
2024-07-14 03:28:36,197 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=52.7 pTM=0.367 ipTM=0.247 tol=7.7
2024-07-14 03:36:35,756 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=52.6 pTM=0.367 ipTM=0.244 tol=6.62
2024-07-14 03:44:35,469 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=53 pTM=0.37 ipTM=0.248 tol=10
2024-07-14 03:52:35,198 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=53 pTM=0.367 ipTM=0.243 tol=8.91
2024-07-14 03:52:35,203 alphafold2_multimer_v3_model_4_seed_000 took 14882.2s (30 recycles)
2024-07-14 04:00:45,064 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=46.7 pTM=0.358 ipTM=0.234
2024-07-14 04:08:44,374 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=50.3 pTM=0.373 ipTM=0.24 tol=18.7
2024-07-14 04:16:43,630 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=50.7 pTM=0.377 ipTM=0.241 tol=17
2024-07-14 04:24:42,628 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=51.5 pTM=0.383 ipTM=0.246 tol=17
2024-07-14 04:32:41,622 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=52.1 pTM=0.382 ipTM=0.251 tol=12
2024-07-14 04:40:40,608 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=52.7 pTM=0.382 ipTM=0.246 tol=12.1
2024-07-14 04:48:39,807 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=52.4 pTM=0.379 ipTM=0.243 tol=9.6
2024-07-14 04:56:38,822 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=52.9 pTM=0.38 ipTM=0.243 tol=8.28
2024-07-14 05:04:37,910 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=52.7 pTM=0.381 ipTM=0.247 tol=9.56
2024-07-14 05:12:36,941 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=52.8 pTM=0.381 ipTM=0.246 tol=8.26
2024-07-14 05:20:35,842 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=52.7 pTM=0.378 ipTM=0.239 tol=7.99
2024-07-14 05:28:34,654 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=53.1 pTM=0.381 ipTM=0.246 tol=8.31
2024-07-14 05:36:33,550 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=53 pTM=0.381 ipTM=0.248 tol=7.01
2024-07-14 05:44:32,728 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=52.5 pTM=0.379 ipTM=0.24 tol=10.4
2024-07-14 05:52:31,674 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=52.9 pTM=0.383 ipTM=0.249 tol=15.9
2024-07-14 06:00:30,639 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=52.8 pTM=0.381 ipTM=0.245 tol=11.1
2024-07-14 06:08:29,451 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=53.1 pTM=0.383 ipTM=0.249 tol=10.6
2024-07-14 06:16:28,254 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=53.5 pTM=0.385 ipTM=0.252 tol=9.01
2024-07-14 06:24:27,037 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=53.1 pTM=0.383 ipTM=0.25 tol=7.1
2024-07-14 06:32:25,801 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=53.2 pTM=0.382 ipTM=0.25 tol=6.37
2024-07-14 06:40:24,557 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=53.3 pTM=0.384 ipTM=0.253 tol=6.76
2024-07-14 06:48:23,504 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=52.8 pTM=0.379 ipTM=0.245 tol=5.92
2024-07-14 06:56:22,472 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=53.1 pTM=0.381 ipTM=0.246 tol=10.3
2024-07-14 07:04:21,563 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=53.4 pTM=0.381 ipTM=0.249 tol=9.93
2024-07-14 07:12:20,428 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=53.3 pTM=0.383 ipTM=0.254 tol=11.5
2024-07-14 07:20:19,347 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=53.3 pTM=0.38 ipTM=0.247 tol=8.39
2024-07-14 07:28:18,056 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=53.3 pTM=0.381 ipTM=0.25 tol=8.35
2024-07-14 07:36:16,755 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=53.3 pTM=0.384 ipTM=0.257 tol=9.23
2024-07-14 07:44:15,528 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=53.1 pTM=0.382 ipTM=0.252 tol=7.34
2024-07-14 07:52:14,424 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=53 pTM=0.381 ipTM=0.245 tol=13.2
2024-07-14 08:00:13,434 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=53.2 pTM=0.384 ipTM=0.254 tol=13.4
2024-07-14 08:00:13,439 alphafold2_multimer_v3_model_5_seed_000 took 14848.3s (30 recycles)
2024-07-14 08:00:18,309 reranking models by 'multimer' metric
2024-07-14 08:00:25,198 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-14 08:12:50,790 Relaxation took 752.5s
2024-07-14 08:12:50,790 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=54.7 pTM=0.37 ipTM=0.261
2024-07-14 08:23:53,440 Relaxation took 662.6s
2024-07-14 08:23:53,440 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=53.2 pTM=0.384 ipTM=0.254
2024-07-14 09:52:01,916 Relaxation took 5288.5s
2024-07-14 09:52:01,916 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=57.8 pTM=0.373 ipTM=0.251
2024-07-14 10:06:29,804 Relaxation took 867.9s
2024-07-14 10:06:29,804 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=53.5 pTM=0.366 ipTM=0.243
2024-07-14 10:24:05,831 Relaxation took 1056.0s
2024-07-14 10:24:05,831 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=53 pTM=0.367 ipTM=0.243
2024-07-14 10:24:15,899 Done