2024-07-13 11:11:12,536 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-13 11:11:12,869 Running on GPU 2024-07-13 11:11:27,240 Found 6 citations for tools or databases 2024-07-13 11:11:27,240 Query 1/1: TBAL3_SYMC (length 1346) 2024-07-13 11:11:27,683 Sleeping for 8s. Reason: PENDING 2024-07-13 11:11:36,100 Sleeping for 10s. Reason: RUNNING 2024-07-13 11:11:46,523 Sleeping for 9s. Reason: RUNNING 2024-07-13 11:11:55,949 Sleeping for 7s. Reason: RUNNING 2024-07-13 11:12:03,372 Sleeping for 6s. Reason: RUNNING 2024-07-13 11:12:09,790 Sleeping for 6s. Reason: RUNNING 2024-07-13 11:12:16,208 Sleeping for 6s. Reason: RUNNING 2024-07-13 11:12:22,639 Sleeping for 6s. Reason: RUNNING 2024-07-13 11:12:29,072 Sleeping for 10s. Reason: RUNNING 2024-07-13 11:12:39,521 Sleeping for 6s. Reason: RUNNING 2024-07-13 11:12:45,955 Sleeping for 7s. Reason: RUNNING 2024-07-13 11:12:53,365 Sleeping for 7s. Reason: RUNNING 2024-07-13 11:13:00,796 Sleeping for 9s. Reason: RUNNING 2024-07-13 11:13:10,219 Sleeping for 8s. Reason: RUNNING 2024-07-13 11:13:18,635 Sleeping for 7s. Reason: RUNNING 2024-07-13 11:13:26,066 Sleeping for 9s. Reason: RUNNING 2024-07-13 11:13:35,492 Sleeping for 8s. Reason: RUNNING 2024-07-13 11:13:43,904 Sleeping for 10s. Reason: RUNNING 2024-07-13 11:13:54,318 Sleeping for 9s. Reason: RUNNING 2024-07-13 11:14:03,773 Sleeping for 9s. Reason: RUNNING 2024-07-13 11:14:13,201 Sleeping for 8s. Reason: RUNNING 2024-07-13 11:14:21,635 Sleeping for 5s. Reason: RUNNING 2024-07-13 11:14:27,054 Sleeping for 6s. Reason: RUNNING 2024-07-13 11:14:33,488 Sleeping for 7s. Reason: RUNNING 2024-07-13 11:14:40,901 Sleeping for 7s. Reason: RUNNING 2024-07-13 11:14:48,328 Sleeping for 5s. Reason: RUNNING 2024-07-13 11:14:53,740 Sleeping for 9s. Reason: RUNNING 2024-07-13 11:15:03,177 Sleeping for 9s. Reason: RUNNING 2024-07-13 11:15:12,608 Sleeping for 9s. Reason: RUNNING 2024-07-13 11:15:22,015 Sleeping for 9s. Reason: RUNNING 2024-07-13 11:15:31,450 Sleeping for 10s. Reason: RUNNING 2024-07-13 11:15:41,880 Sleeping for 5s. Reason: RUNNING 2024-07-13 11:15:47,325 Sleeping for 9s. Reason: RUNNING 2024-07-13 11:15:56,749 Sleeping for 9s. Reason: RUNNING 2024-07-13 11:16:06,174 Sleeping for 5s. Reason: RUNNING 2024-07-13 11:16:11,600 Sleeping for 8s. Reason: RUNNING 2024-07-13 11:16:20,020 Sleeping for 7s. Reason: RUNNING 2024-07-13 11:16:27,441 Sleeping for 5s. Reason: RUNNING 2024-07-13 11:16:32,863 Sleeping for 5s. Reason: RUNNING 2024-07-13 11:16:38,275 Sleeping for 5s. Reason: RUNNING 2024-07-13 11:16:43,701 Sleeping for 7s. Reason: RUNNING 2024-07-13 11:16:51,149 Sleeping for 8s. Reason: RUNNING 2024-07-13 11:16:59,566 Sleeping for 9s. Reason: RUNNING 2024-07-13 11:17:08,995 Sleeping for 7s. Reason: RUNNING 2024-07-13 11:17:16,448 Sleeping for 6s. Reason: RUNNING 2024-07-13 11:17:22,888 Sleeping for 10s. Reason: RUNNING 2024-07-13 11:17:33,293 Sleeping for 8s. Reason: RUNNING 2024-07-13 11:17:41,710 Sleeping for 6s. Reason: RUNNING 2024-07-13 11:17:48,134 Sleeping for 9s. Reason: RUNNING 2024-07-13 11:17:57,564 Sleeping for 7s. Reason: RUNNING 2024-07-13 11:18:05,000 Sleeping for 9s. Reason: RUNNING 2024-07-13 11:18:14,420 Sleeping for 10s. Reason: RUNNING 2024-07-13 11:18:24,857 Sleeping for 10s. Reason: RUNNING 2024-07-13 11:18:40,044 Sleeping for 10s. Reason: PENDING 2024-07-13 11:18:50,493 Sleeping for 6s. Reason: RUNNING 2024-07-13 11:18:56,922 Sleeping for 9s. Reason: RUNNING 2024-07-13 11:19:06,370 Sleeping for 10s. Reason: RUNNING 2024-07-13 11:19:16,829 Sleeping for 6s. Reason: RUNNING 2024-07-13 11:19:23,267 Sleeping for 9s. Reason: RUNNING 2024-07-13 11:19:32,709 Sleeping for 9s. Reason: RUNNING 2024-07-13 11:19:42,141 Sleeping for 5s. Reason: RUNNING 2024-07-13 11:19:47,563 Sleeping for 10s. Reason: RUNNING 2024-07-13 11:19:57,988 Sleeping for 7s. Reason: RUNNING 2024-07-13 11:20:05,402 Sleeping for 9s. Reason: RUNNING 2024-07-13 11:20:14,836 Sleeping for 7s. Reason: RUNNING 2024-07-13 11:20:22,261 Sleeping for 10s. Reason: RUNNING 2024-07-13 11:20:32,695 Sleeping for 9s. Reason: RUNNING 2024-07-13 11:20:42,113 Sleeping for 7s. Reason: RUNNING 2024-07-13 11:20:49,545 Sleeping for 5s. Reason: RUNNING 2024-07-13 11:20:54,963 Sleeping for 5s. Reason: RUNNING 2024-07-13 11:21:00,377 Sleeping for 9s. Reason: RUNNING 2024-07-13 11:21:09,811 Sleeping for 8s. Reason: RUNNING 2024-07-13 11:21:18,234 Sleeping for 9s. Reason: RUNNING 2024-07-13 11:21:27,668 Sleeping for 8s. Reason: RUNNING 2024-07-13 11:21:36,087 Sleeping for 5s. Reason: RUNNING 2024-07-13 11:21:41,508 Sleeping for 8s. Reason: RUNNING 2024-07-13 11:21:55,639 Setting max_seq=508, max_extra_seq=2048 2024-07-13 11:25:12,628 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=81.9 pTM=0.526 ipTM=0.228 2024-07-13 11:26:00,470 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=81.9 pTM=0.525 ipTM=0.206 tol=10.2 2024-07-13 11:26:48,450 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=82 pTM=0.523 ipTM=0.206 tol=7.01 2024-07-13 11:27:36,489 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=81.6 pTM=0.523 ipTM=0.208 tol=4.07 2024-07-13 11:28:24,535 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=82 pTM=0.524 ipTM=0.21 tol=1.71 2024-07-13 11:29:12,599 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=81.9 pTM=0.524 ipTM=0.211 tol=1.8 2024-07-13 11:30:00,671 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=82.1 pTM=0.525 ipTM=0.208 tol=1.55 2024-07-13 11:30:48,779 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=82.5 pTM=0.526 ipTM=0.212 tol=1.54 2024-07-13 11:31:36,905 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=82.3 pTM=0.524 ipTM=0.207 tol=1.58 2024-07-13 11:32:24,987 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=82.2 pTM=0.526 ipTM=0.214 tol=1.78 2024-07-13 11:33:13,099 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=82.1 pTM=0.524 ipTM=0.207 tol=2.28 2024-07-13 11:34:01,182 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=82 pTM=0.524 ipTM=0.208 tol=2.43 2024-07-13 11:34:49,336 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=82.3 pTM=0.525 ipTM=0.208 tol=2.05 2024-07-13 11:35:37,440 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=81.9 pTM=0.524 ipTM=0.21 tol=1.85 2024-07-13 11:36:25,545 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=82.4 pTM=0.525 ipTM=0.209 tol=1.78 2024-07-13 11:37:13,668 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=82 pTM=0.524 ipTM=0.209 tol=2.12 2024-07-13 11:38:01,788 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=82.2 pTM=0.525 ipTM=0.207 tol=2.23 2024-07-13 11:38:49,919 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=82.1 pTM=0.524 ipTM=0.208 tol=1.32 2024-07-13 11:39:38,088 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=82.2 pTM=0.526 ipTM=0.21 tol=1.26 2024-07-13 11:40:26,183 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=81.9 pTM=0.525 ipTM=0.21 tol=1.76 2024-07-13 11:41:14,290 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=82 pTM=0.525 ipTM=0.208 tol=1.77 2024-07-13 11:42:02,369 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=81.6 pTM=0.525 ipTM=0.207 tol=1.24 2024-07-13 11:42:50,460 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=81.9 pTM=0.526 ipTM=0.211 tol=1.61 2024-07-13 11:43:38,565 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=81.8 pTM=0.524 ipTM=0.208 tol=1.83 2024-07-13 11:44:26,645 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=81.9 pTM=0.525 ipTM=0.212 tol=1.52 2024-07-13 11:45:14,760 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=81.7 pTM=0.524 ipTM=0.207 tol=2.16 2024-07-13 11:46:02,873 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=82.1 pTM=0.524 ipTM=0.205 tol=2.27 2024-07-13 11:46:50,999 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=82.1 pTM=0.524 ipTM=0.206 tol=1.82 2024-07-13 11:47:39,104 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=82.2 pTM=0.526 ipTM=0.21 tol=1.34 2024-07-13 11:48:27,188 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=82.2 pTM=0.527 ipTM=0.215 tol=1.48 2024-07-13 11:49:15,321 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=82.1 pTM=0.526 ipTM=0.213 tol=1.37 2024-07-13 11:49:15,322 alphafold2_multimer_v3_model_1_seed_000 took 1636.1s (30 recycles) 2024-07-13 11:50:04,474 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=81.8 pTM=0.537 ipTM=0.247 2024-07-13 11:50:52,584 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=82.4 pTM=0.533 ipTM=0.231 tol=12.5 2024-07-13 11:51:40,698 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=82.9 pTM=0.53 ipTM=0.227 tol=3.59 2024-07-13 11:52:28,799 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=82.9 pTM=0.531 ipTM=0.225 tol=3.78 2024-07-13 11:53:16,873 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=82.9 pTM=0.529 ipTM=0.229 tol=3.32 2024-07-13 11:54:04,981 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=82.9 pTM=0.531 ipTM=0.231 tol=2.92 2024-07-13 11:54:53,090 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=83.2 pTM=0.532 ipTM=0.316 tol=1.7 2024-07-13 11:55:41,206 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=83.4 pTM=0.533 ipTM=0.293 tol=0.866 2024-07-13 11:56:29,370 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=83.2 pTM=0.533 ipTM=0.231 tol=1.52 2024-07-13 11:57:17,525 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=83.1 pTM=0.533 ipTM=0.225 tol=0.942 2024-07-13 11:58:05,657 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=83 pTM=0.531 ipTM=0.225 tol=0.973 2024-07-13 11:58:53,787 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=83 pTM=0.532 ipTM=0.225 tol=0.655 2024-07-13 11:59:41,877 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=83.1 pTM=0.532 ipTM=0.225 tol=1.27 2024-07-13 12:00:30,030 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=82.9 pTM=0.531 ipTM=0.224 tol=1.08 2024-07-13 12:01:18,136 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=83.2 pTM=0.534 ipTM=0.237 tol=1.71 2024-07-13 12:02:06,315 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=83.2 pTM=0.533 ipTM=0.226 tol=0.984 2024-07-13 12:02:54,467 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=82.9 pTM=0.533 ipTM=0.227 tol=0.871 2024-07-13 12:03:42,599 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=83.1 pTM=0.532 ipTM=0.224 tol=0.711 2024-07-13 12:04:30,753 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=82.9 pTM=0.533 ipTM=0.224 tol=1.11 2024-07-13 12:05:18,856 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=83.1 pTM=0.534 ipTM=0.225 tol=0.596 2024-07-13 12:06:06,965 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=82.9 pTM=0.534 ipTM=0.229 tol=2.01 2024-07-13 12:06:55,121 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=82.7 pTM=0.534 ipTM=0.234 tol=2.08 2024-07-13 12:07:43,212 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=82.6 pTM=0.536 ipTM=0.243 tol=2.32 2024-07-13 12:08:31,313 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=82.8 pTM=0.536 ipTM=0.233 tol=1.68 2024-07-13 12:09:19,453 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=82.8 pTM=0.533 ipTM=0.228 tol=0.584 2024-07-13 12:10:07,649 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=82.8 pTM=0.534 ipTM=0.235 tol=0.657 2024-07-13 12:10:55,752 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=82.9 pTM=0.535 ipTM=0.24 tol=1.14 2024-07-13 12:11:43,863 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=82.9 pTM=0.536 ipTM=0.24 tol=0.732 2024-07-13 12:12:31,916 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=82.9 pTM=0.536 ipTM=0.24 tol=0.506 2024-07-13 12:13:19,933 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=82.9 pTM=0.535 ipTM=0.244 tol=0.29 2024-07-13 12:13:19,934 alphafold2_multimer_v3_model_2_seed_000 took 1443.5s (29 recycles) 2024-07-13 12:14:09,012 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=82.1 pTM=0.536 ipTM=0.357 2024-07-13 12:14:57,050 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=81.5 pTM=0.525 ipTM=0.26 tol=5.59 2024-07-13 12:15:45,120 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=81.8 pTM=0.524 ipTM=0.224 tol=4.88 2024-07-13 12:16:33,241 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=81.6 pTM=0.524 ipTM=0.217 tol=4.57 2024-07-13 12:17:21,346 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=82.2 pTM=0.527 ipTM=0.223 tol=4.24 2024-07-13 12:18:09,471 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=82.3 pTM=0.527 ipTM=0.221 tol=2.73 2024-07-13 12:18:57,597 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=82.4 pTM=0.529 ipTM=0.243 tol=2.85 2024-07-13 12:19:45,674 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=82.4 pTM=0.529 ipTM=0.227 tol=2.37 2024-07-13 12:20:33,727 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=82.6 pTM=0.53 ipTM=0.234 tol=1.75 2024-07-13 12:21:21,758 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=82.5 pTM=0.53 ipTM=0.227 tol=1.19 2024-07-13 12:22:09,793 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=82.5 pTM=0.53 ipTM=0.241 tol=0.643 2024-07-13 12:22:57,840 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=82.5 pTM=0.53 ipTM=0.233 tol=1.43 2024-07-13 12:23:45,897 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=82.6 pTM=0.529 ipTM=0.247 tol=1.63 2024-07-13 12:24:33,912 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=82.6 pTM=0.528 ipTM=0.236 tol=1.4 2024-07-13 12:25:21,980 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=82.7 pTM=0.529 ipTM=0.243 tol=1.25 2024-07-13 12:26:10,011 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=82.6 pTM=0.531 ipTM=0.233 tol=1.33 2024-07-13 12:26:58,104 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=82.5 pTM=0.529 ipTM=0.257 tol=2.05 2024-07-13 12:27:46,204 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=82.6 pTM=0.529 ipTM=0.226 tol=2.12 2024-07-13 12:28:34,350 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=82.4 pTM=0.528 ipTM=0.24 tol=1.49 2024-07-13 12:29:22,475 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=82.6 pTM=0.533 ipTM=0.235 tol=1.61 2024-07-13 12:30:10,655 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=82.4 pTM=0.528 ipTM=0.253 tol=1.77 2024-07-13 12:30:58,797 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=82.4 pTM=0.533 ipTM=0.237 tol=1.5 2024-07-13 12:31:46,967 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=82.4 pTM=0.528 ipTM=0.243 tol=2.15 2024-07-13 12:32:35,088 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=82.4 pTM=0.532 ipTM=0.24 tol=2.36 2024-07-13 12:33:23,228 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=82.4 pTM=0.527 ipTM=0.247 tol=2.91 2024-07-13 12:34:11,401 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=82.2 pTM=0.528 ipTM=0.223 tol=3.34 2024-07-13 12:34:59,544 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=82.4 pTM=0.527 ipTM=0.25 tol=1.7 2024-07-13 12:35:47,694 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=82.5 pTM=0.529 ipTM=0.229 tol=2.75 2024-07-13 12:36:35,865 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=82.4 pTM=0.528 ipTM=0.243 tol=3.17 2024-07-13 12:37:23,998 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=82.5 pTM=0.532 ipTM=0.234 tol=2.06 2024-07-13 12:38:12,090 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=82.5 pTM=0.529 ipTM=0.256 tol=1.79 2024-07-13 12:38:12,092 alphafold2_multimer_v3_model_3_seed_000 took 1491.1s (30 recycles) 2024-07-13 12:39:01,273 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=81.5 pTM=0.535 ipTM=0.231 2024-07-13 12:39:49,434 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=80.8 pTM=0.528 ipTM=0.224 tol=10.1 2024-07-13 12:40:37,585 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=81.3 pTM=0.535 ipTM=0.233 tol=9.17 2024-07-13 12:41:25,754 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=80.8 pTM=0.531 ipTM=0.235 tol=7.7 2024-07-13 12:42:13,857 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=81.6 pTM=0.537 ipTM=0.237 tol=6.14 2024-07-13 12:43:01,976 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=81.3 pTM=0.536 ipTM=0.241 tol=3.47 2024-07-13 12:43:50,118 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=81.6 pTM=0.54 ipTM=0.246 tol=1.61 2024-07-13 12:44:38,337 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=81.6 pTM=0.541 ipTM=0.248 tol=3.33 2024-07-13 12:45:26,487 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=81.9 pTM=0.54 ipTM=0.239 tol=3.09 2024-07-13 12:46:14,643 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=81.8 pTM=0.542 ipTM=0.247 tol=2.74 2024-07-13 12:47:02,803 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=81.9 pTM=0.542 ipTM=0.242 tol=2.42 2024-07-13 12:47:50,956 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=81.9 pTM=0.542 ipTM=0.25 tol=2.71 2024-07-13 12:48:39,076 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=81.9 pTM=0.54 ipTM=0.24 tol=2.04 2024-07-13 12:49:27,205 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=82.1 pTM=0.54 ipTM=0.249 tol=2.09 2024-07-13 12:50:15,367 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=82.1 pTM=0.541 ipTM=0.242 tol=2.76 2024-07-13 12:51:03,512 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=82.1 pTM=0.54 ipTM=0.246 tol=1.93 2024-07-13 12:51:51,643 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=82.2 pTM=0.543 ipTM=0.245 tol=1.77 2024-07-13 12:52:39,842 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=82.3 pTM=0.54 ipTM=0.245 tol=1.77 2024-07-13 12:53:28,026 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=82.1 pTM=0.54 ipTM=0.243 tol=1.75 2024-07-13 12:54:16,173 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=82.2 pTM=0.54 ipTM=0.246 tol=2.03 2024-07-13 12:55:04,269 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=82.1 pTM=0.539 ipTM=0.248 tol=1.82 2024-07-13 12:55:52,392 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=81.9 pTM=0.539 ipTM=0.249 tol=2.41 2024-07-13 12:56:40,566 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=82.2 pTM=0.54 ipTM=0.241 tol=2.05 2024-07-13 12:57:28,712 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=82.2 pTM=0.54 ipTM=0.246 tol=1.53 2024-07-13 12:58:16,836 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=82.1 pTM=0.539 ipTM=0.251 tol=1.56 2024-07-13 12:59:05,003 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=82.1 pTM=0.538 ipTM=0.247 tol=2.26 2024-07-13 12:59:53,202 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=82.1 pTM=0.539 ipTM=0.243 tol=1.4 2024-07-13 13:00:41,381 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=82.2 pTM=0.539 ipTM=0.244 tol=0.854 2024-07-13 13:01:29,566 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=82.1 pTM=0.539 ipTM=0.242 tol=1.32 2024-07-13 13:02:17,695 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=82.4 pTM=0.539 ipTM=0.244 tol=1.55 2024-07-13 13:03:05,840 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=82.1 pTM=0.54 ipTM=0.253 tol=0.905 2024-07-13 13:03:05,841 alphafold2_multimer_v3_model_4_seed_000 took 1492.7s (30 recycles) 2024-07-13 13:03:55,017 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=81.1 pTM=0.535 ipTM=0.232 2024-07-13 13:04:43,159 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=81.1 pTM=0.529 ipTM=0.22 tol=7.7 2024-07-13 13:05:31,332 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=82 pTM=0.53 ipTM=0.223 tol=3.05 2024-07-13 13:06:19,502 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=81.7 pTM=0.535 ipTM=0.24 tol=8.31 2024-07-13 13:07:07,670 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=82.1 pTM=0.535 ipTM=0.235 tol=1.07 2024-07-13 13:07:55,794 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=81.9 pTM=0.535 ipTM=0.236 tol=0.804 2024-07-13 13:08:43,926 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=82.1 pTM=0.532 ipTM=0.23 tol=2.19 2024-07-13 13:09:32,050 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=82.2 pTM=0.539 ipTM=0.245 tol=2.04 2024-07-13 13:10:20,243 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=82.4 pTM=0.535 ipTM=0.233 tol=4.37 2024-07-13 13:11:08,463 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=82.2 pTM=0.531 ipTM=0.224 tol=1.59 2024-07-13 13:11:56,653 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=82.3 pTM=0.534 ipTM=0.229 tol=1.75 2024-07-13 13:12:44,773 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=82.1 pTM=0.537 ipTM=0.242 tol=4.26 2024-07-13 13:13:32,953 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=82.3 pTM=0.534 ipTM=0.229 tol=2.03 2024-07-13 13:14:21,058 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=82.2 pTM=0.54 ipTM=0.25 tol=2.62 2024-07-13 13:15:09,246 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=82.4 pTM=0.536 ipTM=0.234 tol=1.79 2024-07-13 13:15:57,373 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=82.4 pTM=0.536 ipTM=0.236 tol=1.38 2024-07-13 13:16:45,515 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=82.4 pTM=0.535 ipTM=0.232 tol=1.31 2024-07-13 13:17:33,682 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=82.6 pTM=0.536 ipTM=0.232 tol=1.04 2024-07-13 13:18:21,873 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=82.4 pTM=0.535 ipTM=0.232 tol=0.562 2024-07-13 13:19:10,075 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=82.5 pTM=0.535 ipTM=0.232 tol=0.912 2024-07-13 13:19:58,249 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=82.3 pTM=0.535 ipTM=0.234 tol=0.488 2024-07-13 13:19:58,250 alphafold2_multimer_v3_model_5_seed_000 took 1011.3s (20 recycles) 2024-07-13 13:19:59,332 reranking models by 'multimer' metric 2024-07-13 13:20:00,815 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-13 13:23:23,079 Relaxation took 203.7s 2024-07-13 13:23:23,079 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=82.5 pTM=0.529 ipTM=0.256 2024-07-13 13:25:26,439 Relaxation took 123.4s 2024-07-13 13:25:26,440 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=82.1 pTM=0.54 ipTM=0.253 2024-07-13 13:27:15,494 Relaxation took 109.1s 2024-07-13 13:27:15,494 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=82.9 pTM=0.535 ipTM=0.244 2024-07-13 13:28:41,266 Relaxation took 85.8s 2024-07-13 13:28:41,267 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=82.3 pTM=0.535 ipTM=0.234 2024-07-13 13:30:31,992 Relaxation took 110.7s 2024-07-13 13:30:31,992 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=82.1 pTM=0.526 ipTM=0.213 2024-07-13 13:30:36,693 Done