2024-07-13 11:28:51,533 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 11:28:51,853 Running on GPU
2024-07-13 11:29:12,364 Found 6 citations for tools or databases
2024-07-13 11:29:12,364 Query 1/1: TBX15_HEXD (length 1088)
2024-07-13 11:29:12,827 Sleeping for 8s. Reason: PENDING
2024-07-13 11:29:21,241 Sleeping for 5s. Reason: RUNNING
2024-07-13 11:29:26,658 Sleeping for 7s. Reason: RUNNING
2024-07-13 11:29:34,092 Sleeping for 7s. Reason: RUNNING
2024-07-13 11:29:41,524 Sleeping for 6s. Reason: RUNNING
2024-07-13 11:29:47,950 Sleeping for 6s. Reason: RUNNING
2024-07-13 11:29:54,385 Sleeping for 9s. Reason: RUNNING
2024-07-13 11:30:03,809 Sleeping for 9s. Reason: RUNNING
2024-07-13 11:30:13,246 Sleeping for 7s. Reason: RUNNING
2024-07-13 11:30:20,671 Sleeping for 9s. Reason: RUNNING
2024-07-13 11:30:34,103 Sleeping for 9s. Reason: PENDING
2024-07-13 11:30:43,513 Sleeping for 9s. Reason: RUNNING
2024-07-13 11:30:52,929 Sleeping for 9s. Reason: RUNNING
2024-07-13 11:31:02,349 Sleeping for 7s. Reason: RUNNING
2024-07-13 11:31:09,790 Sleeping for 7s. Reason: RUNNING
2024-07-13 11:31:17,216 Sleeping for 8s. Reason: RUNNING
2024-07-13 11:31:28,152 Setting max_seq=508, max_extra_seq=2048
2024-07-13 11:34:30,574 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=60.4 pTM=0.506 ipTM=0.223
2024-07-13 11:34:52,655 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=61.1 pTM=0.499 ipTM=0.202 tol=14.1
2024-07-13 11:35:14,877 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=61.8 pTM=0.495 ipTM=0.214 tol=9.02
2024-07-13 11:35:37,161 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=61.2 pTM=0.495 ipTM=0.191 tol=8.7
2024-07-13 11:35:59,492 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=61.3 pTM=0.496 ipTM=0.182 tol=6.48
2024-07-13 11:36:21,851 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=61.3 pTM=0.498 ipTM=0.179 tol=8.17
2024-07-13 11:36:44,218 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=61.4 pTM=0.501 ipTM=0.193 tol=9.16
2024-07-13 11:37:06,599 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61.2 pTM=0.501 ipTM=0.204 tol=5.8
2024-07-13 11:37:28,973 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=61.5 pTM=0.503 ipTM=0.205 tol=4.87
2024-07-13 11:37:51,357 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=61.4 pTM=0.504 ipTM=0.203 tol=4.42
2024-07-13 11:38:13,723 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=61.4 pTM=0.504 ipTM=0.198 tol=6.27
2024-07-13 11:38:36,121 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=61.6 pTM=0.505 ipTM=0.199 tol=3.3
2024-07-13 11:38:58,502 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=61.6 pTM=0.506 ipTM=0.206 tol=4.95
2024-07-13 11:39:20,895 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=61.5 pTM=0.506 ipTM=0.216 tol=4.27
2024-07-13 11:39:43,284 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=61.6 pTM=0.506 ipTM=0.243 tol=3.52
2024-07-13 11:40:05,697 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=61.6 pTM=0.507 ipTM=0.262 tol=3.21
2024-07-13 11:40:28,121 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=61.7 pTM=0.508 ipTM=0.278 tol=5.17
2024-07-13 11:40:50,513 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=61.5 pTM=0.506 ipTM=0.265 tol=7.25
2024-07-13 11:41:12,935 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=61.6 pTM=0.507 ipTM=0.275 tol=5.01
2024-07-13 11:41:35,344 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=61.5 pTM=0.507 ipTM=0.256 tol=4.38
2024-07-13 11:41:57,741 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=61.6 pTM=0.509 ipTM=0.258 tol=4.43
2024-07-13 11:42:20,167 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=61.6 pTM=0.507 ipTM=0.269 tol=3.21
2024-07-13 11:42:42,561 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=61.6 pTM=0.507 ipTM=0.252 tol=3.75
2024-07-13 11:43:04,958 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=61.6 pTM=0.506 ipTM=0.255 tol=2.69
2024-07-13 11:43:27,344 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=61.6 pTM=0.507 ipTM=0.269 tol=2.8
2024-07-13 11:43:49,714 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=61.5 pTM=0.507 ipTM=0.259 tol=2.56
2024-07-13 11:44:12,098 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=61.7 pTM=0.509 ipTM=0.248 tol=2.54
2024-07-13 11:44:34,474 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=61.6 pTM=0.508 ipTM=0.257 tol=2.89
2024-07-13 11:44:56,870 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=61.5 pTM=0.509 ipTM=0.256 tol=4.87
2024-07-13 11:45:19,258 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=61.5 pTM=0.506 ipTM=0.259 tol=4.4
2024-07-13 11:45:41,677 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=61.6 pTM=0.508 ipTM=0.28 tol=2.51
2024-07-13 11:45:41,678 alphafold2_multimer_v3_model_1_seed_000 took 803.7s (30 recycles)
2024-07-13 11:46:04,796 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=59.5 pTM=0.501 ipTM=0.171
2024-07-13 11:46:27,266 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=61.4 pTM=0.501 ipTM=0.157 tol=12.6
2024-07-13 11:46:49,763 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=61.5 pTM=0.5 ipTM=0.162 tol=11.2
2024-07-13 11:47:12,290 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=61.8 pTM=0.499 ipTM=0.153 tol=10.7
2024-07-13 11:47:34,789 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=61.7 pTM=0.5 ipTM=0.158 tol=7.8
2024-07-13 11:47:57,307 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=62 pTM=0.501 ipTM=0.159 tol=8.36
2024-07-13 11:48:19,807 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62 pTM=0.503 ipTM=0.174 tol=5.28
2024-07-13 11:48:42,302 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=62.1 pTM=0.501 ipTM=0.169 tol=5.98
2024-07-13 11:49:04,793 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62.1 pTM=0.503 ipTM=0.178 tol=5.04
2024-07-13 11:49:27,278 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=62.1 pTM=0.502 ipTM=0.173 tol=4.37
2024-07-13 11:49:49,771 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62 pTM=0.504 ipTM=0.177 tol=7.05
2024-07-13 11:50:12,241 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=62.1 pTM=0.503 ipTM=0.179 tol=6.62
2024-07-13 11:50:34,731 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=62.1 pTM=0.504 ipTM=0.177 tol=4.84
2024-07-13 11:50:57,211 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=62.2 pTM=0.505 ipTM=0.178 tol=4.06
2024-07-13 11:51:19,681 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=62.2 pTM=0.504 ipTM=0.177 tol=4.27
2024-07-13 11:51:42,150 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62.2 pTM=0.506 ipTM=0.18 tol=3.04
2024-07-13 11:52:04,634 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=62.2 pTM=0.504 ipTM=0.177 tol=5.7
2024-07-13 11:52:27,100 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62 pTM=0.505 ipTM=0.178 tol=3.65
2024-07-13 11:52:49,601 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=62.1 pTM=0.504 ipTM=0.177 tol=4.92
2024-07-13 11:53:12,074 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62 pTM=0.505 ipTM=0.178 tol=4.37
2024-07-13 11:53:34,545 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62.1 pTM=0.505 ipTM=0.178 tol=3.38
2024-07-13 11:53:57,011 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62.2 pTM=0.505 ipTM=0.178 tol=2.66
2024-07-13 11:54:19,473 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=61.9 pTM=0.505 ipTM=0.179 tol=5.29
2024-07-13 11:54:41,937 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.2 pTM=0.505 ipTM=0.178 tol=6.8
2024-07-13 11:55:04,423 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=62 pTM=0.505 ipTM=0.177 tol=5.07
2024-07-13 11:55:26,909 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=62 pTM=0.506 ipTM=0.175 tol=3.63
2024-07-13 11:55:49,388 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=62.1 pTM=0.503 ipTM=0.173 tol=3.8
2024-07-13 11:56:11,850 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.1 pTM=0.506 ipTM=0.179 tol=5.22
2024-07-13 11:56:34,328 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62 pTM=0.503 ipTM=0.172 tol=7.69
2024-07-13 11:56:56,797 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=61.9 pTM=0.507 ipTM=0.185 tol=5.34
2024-07-13 11:57:19,284 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=62.1 pTM=0.503 ipTM=0.176 tol=3.71
2024-07-13 11:57:19,285 alphafold2_multimer_v3_model_2_seed_000 took 696.9s (30 recycles)
2024-07-13 11:57:42,532 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=60.8 pTM=0.49 ipTM=0.166
2024-07-13 11:58:05,086 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=61.7 pTM=0.496 ipTM=0.165 tol=15.1
2024-07-13 11:58:27,630 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=62.2 pTM=0.51 ipTM=0.207 tol=9.44
2024-07-13 11:58:50,189 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=62.3 pTM=0.513 ipTM=0.217 tol=7.42
2024-07-13 11:59:12,735 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=62.2 pTM=0.515 ipTM=0.222 tol=6.9
2024-07-13 11:59:35,309 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=62.2 pTM=0.516 ipTM=0.215 tol=5.83
2024-07-13 11:59:57,859 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=62.4 pTM=0.52 ipTM=0.221 tol=4.52
2024-07-13 12:00:20,402 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62.3 pTM=0.518 ipTM=0.218 tol=2.67
2024-07-13 12:00:42,951 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=62.5 pTM=0.52 ipTM=0.224 tol=3.65
2024-07-13 12:01:05,487 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=62.3 pTM=0.518 ipTM=0.214 tol=3.69
2024-07-13 12:01:28,005 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=62.2 pTM=0.515 ipTM=0.203 tol=5.47
2024-07-13 12:01:50,544 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=62.3 pTM=0.514 ipTM=0.204 tol=4
2024-07-13 12:02:13,101 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=62.3 pTM=0.515 ipTM=0.215 tol=2.57
2024-07-13 12:02:35,643 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.2 pTM=0.513 ipTM=0.197 tol=4.79
2024-07-13 12:02:58,175 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=62.4 pTM=0.514 ipTM=0.19 tol=4.43
2024-07-13 12:03:20,708 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=62.4 pTM=0.515 ipTM=0.205 tol=2.71
2024-07-13 12:03:43,268 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=62.3 pTM=0.513 ipTM=0.177 tol=2.74
2024-07-13 12:04:05,824 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=62.2 pTM=0.513 ipTM=0.185 tol=4.46
2024-07-13 12:04:28,356 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=62.2 pTM=0.512 ipTM=0.178 tol=4.2
2024-07-13 12:04:50,906 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=62.2 pTM=0.513 ipTM=0.185 tol=3.1
2024-07-13 12:05:13,437 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=62.2 pTM=0.514 ipTM=0.183 tol=1.77
2024-07-13 12:05:35,971 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=62.2 pTM=0.512 ipTM=0.174 tol=1.71
2024-07-13 12:05:58,512 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=62.1 pTM=0.512 ipTM=0.187 tol=2.12
2024-07-13 12:06:21,052 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=62.2 pTM=0.511 ipTM=0.175 tol=2.12
2024-07-13 12:06:43,589 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=62.1 pTM=0.512 ipTM=0.191 tol=1.44
2024-07-13 12:07:06,113 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=62.1 pTM=0.512 ipTM=0.194 tol=1.57
2024-07-13 12:07:28,648 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=62.2 pTM=0.514 ipTM=0.187 tol=2.27
2024-07-13 12:07:51,181 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=62.2 pTM=0.514 ipTM=0.2 tol=1.64
2024-07-13 12:08:13,716 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=62.2 pTM=0.513 ipTM=0.178 tol=2.74
2024-07-13 12:08:36,244 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=62.1 pTM=0.513 ipTM=0.177 tol=2.11
2024-07-13 12:08:58,783 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=62.2 pTM=0.514 ipTM=0.199 tol=1.99
2024-07-13 12:08:58,784 alphafold2_multimer_v3_model_3_seed_000 took 698.8s (30 recycles)
2024-07-13 12:09:21,945 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=59.6 pTM=0.491 ipTM=0.182
2024-07-13 12:09:44,438 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=60 pTM=0.492 ipTM=0.183 tol=12
2024-07-13 12:10:06,954 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=60.8 pTM=0.491 ipTM=0.174 tol=7.04
2024-07-13 12:10:29,478 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=60.6 pTM=0.491 ipTM=0.19 tol=5.21
2024-07-13 12:10:51,991 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=61 pTM=0.495 ipTM=0.216 tol=5.53
2024-07-13 12:11:14,507 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=61.1 pTM=0.496 ipTM=0.205 tol=7.71
2024-07-13 12:11:37,020 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=61.1 pTM=0.496 ipTM=0.189 tol=5.82
2024-07-13 12:11:59,534 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=60.7 pTM=0.497 ipTM=0.184 tol=5.21
2024-07-13 12:12:22,050 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=61.2 pTM=0.5 ipTM=0.187 tol=5.86
2024-07-13 12:12:44,524 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=60.9 pTM=0.501 ipTM=0.191 tol=5.43
2024-07-13 12:13:07,016 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=60.8 pTM=0.504 ipTM=0.193 tol=3.52
2024-07-13 12:13:29,518 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=61 pTM=0.503 ipTM=0.197 tol=3.16
2024-07-13 12:13:52,024 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=60.9 pTM=0.504 ipTM=0.195 tol=4.37
2024-07-13 12:14:14,513 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=60.9 pTM=0.502 ipTM=0.199 tol=6.03
2024-07-13 12:14:37,011 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=61.1 pTM=0.503 ipTM=0.191 tol=3.68
2024-07-13 12:14:59,516 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=61 pTM=0.503 ipTM=0.2 tol=3.97
2024-07-13 12:15:22,025 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=61.1 pTM=0.504 ipTM=0.197 tol=5.67
2024-07-13 12:15:44,546 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=60.9 pTM=0.504 ipTM=0.199 tol=5.08
2024-07-13 12:16:07,071 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=61.1 pTM=0.506 ipTM=0.196 tol=6.59
2024-07-13 12:16:29,572 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=61 pTM=0.508 ipTM=0.203 tol=3.2
2024-07-13 12:16:52,095 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=61 pTM=0.507 ipTM=0.197 tol=3.15
2024-07-13 12:17:14,593 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=61 pTM=0.507 ipTM=0.203 tol=2.68
2024-07-13 12:17:37,087 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=61 pTM=0.506 ipTM=0.194 tol=2.46
2024-07-13 12:17:59,581 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=61 pTM=0.506 ipTM=0.203 tol=2.95
2024-07-13 12:18:22,082 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=61 pTM=0.507 ipTM=0.198 tol=2.73
2024-07-13 12:18:44,549 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60.8 pTM=0.507 ipTM=0.206 tol=2.26
2024-07-13 12:19:07,067 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=61 pTM=0.508 ipTM=0.201 tol=2.87
2024-07-13 12:19:29,570 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=61 pTM=0.507 ipTM=0.202 tol=2.54
2024-07-13 12:19:52,063 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=61.1 pTM=0.51 ipTM=0.205 tol=2.94
2024-07-13 12:20:14,558 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=60.8 pTM=0.509 ipTM=0.212 tol=3.56
2024-07-13 12:20:37,058 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=61.1 pTM=0.51 ipTM=0.207 tol=3.84
2024-07-13 12:20:37,059 alphafold2_multimer_v3_model_4_seed_000 took 697.5s (30 recycles)
2024-07-13 12:21:00,272 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=60.6 pTM=0.498 ipTM=0.199
2024-07-13 12:21:22,843 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=61.5 pTM=0.488 ipTM=0.169 tol=19.2
2024-07-13 12:21:45,428 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=62.1 pTM=0.492 ipTM=0.172 tol=10.5
2024-07-13 12:22:08,013 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=62 pTM=0.498 ipTM=0.174 tol=5.63
2024-07-13 12:22:30,637 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.9 pTM=0.501 ipTM=0.182 tol=4.84
2024-07-13 12:22:53,245 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=61.9 pTM=0.504 ipTM=0.182 tol=4.84
2024-07-13 12:23:15,847 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61.9 pTM=0.509 ipTM=0.208 tol=5.97
2024-07-13 12:23:38,446 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=62.1 pTM=0.509 ipTM=0.213 tol=6.53
2024-07-13 12:24:01,033 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=62.1 pTM=0.512 ipTM=0.232 tol=6.32
2024-07-13 12:24:23,610 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=62.2 pTM=0.51 ipTM=0.215 tol=5.86
2024-07-13 12:24:46,175 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61.9 pTM=0.512 ipTM=0.22 tol=6.86
2024-07-13 12:25:08,765 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=62.2 pTM=0.511 ipTM=0.212 tol=3.47
2024-07-13 12:25:31,351 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=62 pTM=0.513 ipTM=0.223 tol=5.07
2024-07-13 12:25:53,943 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=62.2 pTM=0.511 ipTM=0.214 tol=5.55
2024-07-13 12:26:16,532 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=61.9 pTM=0.515 ipTM=0.233 tol=5.25
2024-07-13 12:26:39,135 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=62.2 pTM=0.51 ipTM=0.206 tol=2.99
2024-07-13 12:27:01,723 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=61.9 pTM=0.518 ipTM=0.25 tol=3.52
2024-07-13 12:27:24,317 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=62.2 pTM=0.51 ipTM=0.21 tol=4.29
2024-07-13 12:27:46,905 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.9 pTM=0.514 ipTM=0.233 tol=3.35
2024-07-13 12:28:09,523 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=62.2 pTM=0.51 ipTM=0.204 tol=3.73
2024-07-13 12:28:32,114 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61.9 pTM=0.517 ipTM=0.231 tol=3.58
2024-07-13 12:28:54,695 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=62.2 pTM=0.511 ipTM=0.203 tol=3.28
2024-07-13 12:29:17,272 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61.8 pTM=0.514 ipTM=0.222 tol=2.85
2024-07-13 12:29:39,858 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=62.1 pTM=0.51 ipTM=0.204 tol=2.31
2024-07-13 12:30:02,447 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61.9 pTM=0.514 ipTM=0.22 tol=1.94
2024-07-13 12:30:25,041 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=62.1 pTM=0.512 ipTM=0.209 tol=2.08
2024-07-13 12:30:47,631 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=62 pTM=0.513 ipTM=0.223 tol=1.93
2024-07-13 12:31:10,211 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=62.2 pTM=0.51 ipTM=0.202 tol=2.12
2024-07-13 12:31:32,790 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.9 pTM=0.515 ipTM=0.222 tol=2.37
2024-07-13 12:31:55,369 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=62.1 pTM=0.51 ipTM=0.209 tol=1.77
2024-07-13 12:32:17,959 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61.9 pTM=0.514 ipTM=0.224 tol=2.55
2024-07-13 12:32:17,960 alphafold2_multimer_v3_model_5_seed_000 took 700.2s (30 recycles)
2024-07-13 12:32:18,680 reranking models by 'multimer' metric
2024-07-13 12:32:20,008 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-13 12:34:36,906 Relaxation took 138.2s
2024-07-13 12:34:36,907 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=61.6 pTM=0.508 ipTM=0.28
2024-07-13 12:37:04,982 Relaxation took 148.1s
2024-07-13 12:37:04,982 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61.9 pTM=0.514 ipTM=0.224
2024-07-13 12:38:42,202 Relaxation took 97.2s
2024-07-13 12:38:42,202 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=61.1 pTM=0.51 ipTM=0.207
2024-07-13 12:40:17,077 Relaxation took 94.9s
2024-07-13 12:40:17,077 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=62.2 pTM=0.514 ipTM=0.199
2024-07-13 12:41:49,106 Relaxation took 92.0s
2024-07-13 12:41:49,106 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=62.1 pTM=0.503 ipTM=0.176
2024-07-13 12:41:52,933 Done