2024-07-13 12:25:14,585 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 12:25:14,906 Running on GPU
2024-07-13 12:25:20,754 Found 6 citations for tools or databases
2024-07-13 12:25:20,755 Query 1/1: TFPT_MSD5 (length 466)
2024-07-13 12:25:21,222 Sleeping for 7s. Reason: PENDING
2024-07-13 12:25:28,636 Sleeping for 5s. Reason: RUNNING
2024-07-13 12:25:34,056 Sleeping for 10s. Reason: RUNNING
2024-07-13 12:25:44,471 Sleeping for 5s. Reason: RUNNING
2024-07-13 12:25:51,066 Sleeping for 9s. Reason: PENDING
2024-07-13 12:26:00,503 Sleeping for 6s. Reason: RUNNING
2024-07-13 12:26:06,921 Sleeping for 8s. Reason: RUNNING
2024-07-13 12:26:16,242 Setting max_seq=508, max_extra_seq=1048
2024-07-13 12:29:49,039 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=39.3 pTM=0.26 ipTM=0.109
2024-07-13 12:29:53,937 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=40.2 pTM=0.265 ipTM=0.12 tol=12.8
2024-07-13 12:29:58,839 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=38.6 pTM=0.247 ipTM=0.105 tol=6.61
2024-07-13 12:30:03,741 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=38.7 pTM=0.254 ipTM=0.114 tol=6.39
2024-07-13 12:30:08,642 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=37.5 pTM=0.249 ipTM=0.107 tol=6.47
2024-07-13 12:30:13,544 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=38 pTM=0.248 ipTM=0.115 tol=7.02
2024-07-13 12:30:18,456 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=38 pTM=0.243 ipTM=0.106 tol=8.12
2024-07-13 12:30:23,363 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=38.8 pTM=0.249 ipTM=0.115 tol=6.74
2024-07-13 12:30:28,272 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=38.1 pTM=0.237 ipTM=0.103 tol=4.45
2024-07-13 12:30:33,175 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=38.5 pTM=0.244 ipTM=0.11 tol=4.94
2024-07-13 12:30:38,084 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=38.7 pTM=0.244 ipTM=0.108 tol=5.04
2024-07-13 12:30:42,985 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=38.2 pTM=0.243 ipTM=0.109 tol=3.71
2024-07-13 12:30:47,896 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=37.9 pTM=0.245 ipTM=0.109 tol=3.1
2024-07-13 12:30:52,802 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=38.2 pTM=0.249 ipTM=0.112 tol=3
2024-07-13 12:30:57,708 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=37.9 pTM=0.244 ipTM=0.109 tol=4.02
2024-07-13 12:31:02,623 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=38.8 pTM=0.25 ipTM=0.113 tol=2.51
2024-07-13 12:31:07,531 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=38.4 pTM=0.241 ipTM=0.107 tol=2.28
2024-07-13 12:31:12,436 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=38.6 pTM=0.249 ipTM=0.113 tol=3.33
2024-07-13 12:31:17,341 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=38.4 pTM=0.245 ipTM=0.106 tol=3.92
2024-07-13 12:31:22,245 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=38.1 pTM=0.252 ipTM=0.112 tol=3.24
2024-07-13 12:31:27,149 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=37.7 pTM=0.25 ipTM=0.107 tol=4.71
2024-07-13 12:31:32,065 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=38.4 pTM=0.252 ipTM=0.112 tol=3.65
2024-07-13 12:31:36,975 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=38.1 pTM=0.246 ipTM=0.105 tol=4.73
2024-07-13 12:31:41,885 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=38.7 pTM=0.252 ipTM=0.109 tol=3.65
2024-07-13 12:31:46,800 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=37.3 pTM=0.243 ipTM=0.105 tol=5.96
2024-07-13 12:31:51,713 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=38.4 pTM=0.252 ipTM=0.112 tol=3.53
2024-07-13 12:31:56,627 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=37.6 pTM=0.246 ipTM=0.109 tol=5.37
2024-07-13 12:32:01,534 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=38.6 pTM=0.253 ipTM=0.113 tol=4.74
2024-07-13 12:32:06,445 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=38 pTM=0.25 ipTM=0.109 tol=3.27
2024-07-13 12:32:11,358 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=38.4 pTM=0.251 ipTM=0.116 tol=2.94
2024-07-13 12:32:16,266 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=37.7 pTM=0.244 ipTM=0.107 tol=3.64
2024-07-13 12:32:16,267 alphafold2_multimer_v3_model_1_seed_000 took 295.7s (30 recycles)
2024-07-13 12:32:21,333 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=40.9 pTM=0.281 ipTM=0.106
2024-07-13 12:32:26,250 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=44.2 pTM=0.281 ipTM=0.1 tol=14
2024-07-13 12:32:31,172 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=44.2 pTM=0.282 ipTM=0.0983 tol=14.1
2024-07-13 12:32:36,086 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=44.3 pTM=0.284 ipTM=0.101 tol=6.45
2024-07-13 12:32:41,005 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=44.8 pTM=0.284 ipTM=0.101 tol=5.98
2024-07-13 12:32:45,920 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=45.1 pTM=0.285 ipTM=0.103 tol=6.79
2024-07-13 12:32:50,840 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=44.7 pTM=0.281 ipTM=0.101 tol=5.14
2024-07-13 12:32:55,765 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=44.1 pTM=0.284 ipTM=0.104 tol=10.4
2024-07-13 12:33:00,691 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=44.5 pTM=0.283 ipTM=0.108 tol=11.3
2024-07-13 12:33:05,620 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=44.8 pTM=0.28 ipTM=0.105 tol=9.38
2024-07-13 12:33:10,542 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=44.7 pTM=0.28 ipTM=0.107 tol=8.73
2024-07-13 12:33:15,471 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=44.1 pTM=0.276 ipTM=0.101 tol=7.1
2024-07-13 12:33:20,403 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=44.5 pTM=0.281 ipTM=0.108 tol=15
2024-07-13 12:33:25,325 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=44.7 pTM=0.283 ipTM=0.109 tol=9.77
2024-07-13 12:33:30,243 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=45.2 pTM=0.285 ipTM=0.107 tol=9.41
2024-07-13 12:33:35,161 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=45.5 pTM=0.285 ipTM=0.112 tol=8.36
2024-07-13 12:33:40,076 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=45.3 pTM=0.287 ipTM=0.115 tol=4.1
2024-07-13 12:33:44,991 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=45 pTM=0.285 ipTM=0.11 tol=2.37
2024-07-13 12:33:49,905 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=45.1 pTM=0.284 ipTM=0.111 tol=2.4
2024-07-13 12:33:54,824 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=44.8 pTM=0.284 ipTM=0.112 tol=1.9
2024-07-13 12:33:59,744 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=45.2 pTM=0.284 ipTM=0.108 tol=1.92
2024-07-13 12:34:04,666 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=45 pTM=0.285 ipTM=0.109 tol=2.03
2024-07-13 12:34:09,586 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=45.3 pTM=0.284 ipTM=0.11 tol=1.69
2024-07-13 12:34:14,511 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=45 pTM=0.284 ipTM=0.105 tol=2.14
2024-07-13 12:34:19,431 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=44.1 pTM=0.284 ipTM=0.104 tol=4.01
2024-07-13 12:34:24,355 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=44.6 pTM=0.283 ipTM=0.102 tol=6.06
2024-07-13 12:34:29,283 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=43.8 pTM=0.288 ipTM=0.115 tol=12
2024-07-13 12:34:34,207 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=44.5 pTM=0.289 ipTM=0.113 tol=9.25
2024-07-13 12:34:39,131 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=44.8 pTM=0.287 ipTM=0.119 tol=8.43
2024-07-13 12:34:44,062 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=44.6 pTM=0.282 ipTM=0.105 tol=10.3
2024-07-13 12:34:48,991 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=44.2 pTM=0.284 ipTM=0.114 tol=2.9
2024-07-13 12:34:48,991 alphafold2_multimer_v3_model_2_seed_000 took 152.6s (30 recycles)
2024-07-13 12:34:54,091 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=40.5 pTM=0.259 ipTM=0.114
2024-07-13 12:34:59,037 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=40.2 pTM=0.235 ipTM=0.107 tol=15.8
2024-07-13 12:35:03,981 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=39.8 pTM=0.248 ipTM=0.11 tol=11.7
2024-07-13 12:35:08,916 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=39.5 pTM=0.26 ipTM=0.116 tol=8.12
2024-07-13 12:35:13,843 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=41.3 pTM=0.287 ipTM=0.116 tol=4.6
2024-07-13 12:35:18,776 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=42.3 pTM=0.296 ipTM=0.121 tol=4.2
2024-07-13 12:35:23,715 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=42.5 pTM=0.292 ipTM=0.118 tol=3.13
2024-07-13 12:35:28,648 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=42.6 pTM=0.295 ipTM=0.121 tol=2.57
2024-07-13 12:35:33,585 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=42.8 pTM=0.292 ipTM=0.119 tol=3.79
2024-07-13 12:35:38,518 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=42.7 pTM=0.294 ipTM=0.126 tol=4.29
2024-07-13 12:35:43,454 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=42.8 pTM=0.292 ipTM=0.122 tol=2.01
2024-07-13 12:35:48,382 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=42.4 pTM=0.295 ipTM=0.13 tol=2.02
2024-07-13 12:35:53,318 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=42.8 pTM=0.292 ipTM=0.125 tol=3.19
2024-07-13 12:35:58,248 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=42.4 pTM=0.294 ipTM=0.133 tol=3.42
2024-07-13 12:36:03,181 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=42.9 pTM=0.292 ipTM=0.127 tol=2.3
2024-07-13 12:36:08,118 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=42.5 pTM=0.292 ipTM=0.128 tol=2.88
2024-07-13 12:36:13,053 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=42.8 pTM=0.289 ipTM=0.123 tol=2.85
2024-07-13 12:36:17,990 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=42.4 pTM=0.291 ipTM=0.127 tol=3.16
2024-07-13 12:36:22,932 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=42.8 pTM=0.288 ipTM=0.123 tol=2.71
2024-07-13 12:36:27,868 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=42.1 pTM=0.293 ipTM=0.131 tol=3.33
2024-07-13 12:36:32,801 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=42.3 pTM=0.29 ipTM=0.125 tol=4.76
2024-07-13 12:36:37,739 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=42.4 pTM=0.291 ipTM=0.126 tol=3.9
2024-07-13 12:36:42,676 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=42.8 pTM=0.289 ipTM=0.125 tol=2.35
2024-07-13 12:36:47,610 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=42.2 pTM=0.29 ipTM=0.123 tol=1.84
2024-07-13 12:36:52,550 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=42.7 pTM=0.29 ipTM=0.125 tol=2.85
2024-07-13 12:36:57,488 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=42.2 pTM=0.292 ipTM=0.126 tol=2.56
2024-07-13 12:37:02,427 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=42.7 pTM=0.29 ipTM=0.123 tol=1.96
2024-07-13 12:37:07,365 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=42.5 pTM=0.292 ipTM=0.128 tol=2.12
2024-07-13 12:37:12,306 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=42.9 pTM=0.291 ipTM=0.132 tol=2.35
2024-07-13 12:37:17,246 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=42.9 pTM=0.291 ipTM=0.128 tol=2.06
2024-07-13 12:37:22,190 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=42.7 pTM=0.291 ipTM=0.128 tol=1.76
2024-07-13 12:37:22,190 alphafold2_multimer_v3_model_3_seed_000 took 153.0s (30 recycles)
2024-07-13 12:37:27,296 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=43.1 pTM=0.284 ipTM=0.175
2024-07-13 12:37:32,244 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=43.7 pTM=0.289 ipTM=0.175 tol=12.9
2024-07-13 12:37:37,193 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=43.8 pTM=0.282 ipTM=0.12 tol=12.5
2024-07-13 12:37:42,140 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=43.8 pTM=0.29 ipTM=0.144 tol=11.3
2024-07-13 12:37:47,089 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=44 pTM=0.29 ipTM=0.135 tol=5.63
2024-07-13 12:37:52,034 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=44.2 pTM=0.289 ipTM=0.142 tol=4.26
2024-07-13 12:37:56,978 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=44.2 pTM=0.289 ipTM=0.146 tol=5.91
2024-07-13 12:38:01,917 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=44.1 pTM=0.287 ipTM=0.136 tol=4.41
2024-07-13 12:38:06,857 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=44.3 pTM=0.291 ipTM=0.146 tol=4.33
2024-07-13 12:38:11,800 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=44 pTM=0.288 ipTM=0.139 tol=6.44
2024-07-13 12:38:16,740 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=44.1 pTM=0.292 ipTM=0.146 tol=4.95
2024-07-13 12:38:21,678 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=43.6 pTM=0.288 ipTM=0.137 tol=5
2024-07-13 12:38:26,621 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=44.2 pTM=0.292 ipTM=0.152 tol=6.68
2024-07-13 12:38:31,555 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=43.9 pTM=0.289 ipTM=0.141 tol=3.45
2024-07-13 12:38:36,498 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=44 pTM=0.291 ipTM=0.139 tol=3.3
2024-07-13 12:38:41,437 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=43.8 pTM=0.289 ipTM=0.139 tol=2.51
2024-07-13 12:38:46,378 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=43.8 pTM=0.29 ipTM=0.144 tol=3.91
2024-07-13 12:38:51,318 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=43.9 pTM=0.288 ipTM=0.14 tol=3.09
2024-07-13 12:38:56,257 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=43.9 pTM=0.29 ipTM=0.143 tol=3.67
2024-07-13 12:39:01,198 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=44.2 pTM=0.291 ipTM=0.146 tol=3.39
2024-07-13 12:39:06,139 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=43.9 pTM=0.29 ipTM=0.141 tol=2.88
2024-07-13 12:39:11,073 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=44.3 pTM=0.29 ipTM=0.14 tol=1.99
2024-07-13 12:39:16,016 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=44.1 pTM=0.289 ipTM=0.138 tol=2.51
2024-07-13 12:39:20,955 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=44 pTM=0.288 ipTM=0.137 tol=6.09
2024-07-13 12:39:25,900 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=43.7 pTM=0.29 ipTM=0.135 tol=8.16
2024-07-13 12:39:30,844 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=44.2 pTM=0.289 ipTM=0.135 tol=5.77
2024-07-13 12:39:35,786 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=43.8 pTM=0.292 ipTM=0.142 tol=4.24
2024-07-13 12:39:40,730 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=43.8 pTM=0.289 ipTM=0.132 tol=3.68
2024-07-13 12:39:45,671 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=43.8 pTM=0.292 ipTM=0.148 tol=3.67
2024-07-13 12:39:50,611 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=43.8 pTM=0.289 ipTM=0.134 tol=3.77
2024-07-13 12:39:55,553 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=43.7 pTM=0.292 ipTM=0.142 tol=2.9
2024-07-13 12:39:55,554 alphafold2_multimer_v3_model_4_seed_000 took 153.2s (30 recycles)
2024-07-13 12:40:00,655 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=39.2 pTM=0.262 ipTM=0.104
2024-07-13 12:40:05,612 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=39.2 pTM=0.237 ipTM=0.093 tol=9.12
2024-07-13 12:40:10,555 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=39.2 pTM=0.258 ipTM=0.112 tol=11.7
2024-07-13 12:40:15,504 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=39.9 pTM=0.258 ipTM=0.095 tol=11.1
2024-07-13 12:40:20,449 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=39.8 pTM=0.262 ipTM=0.105 tol=5.71
2024-07-13 12:40:25,396 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=40.1 pTM=0.262 ipTM=0.0972 tol=6.67
2024-07-13 12:40:30,343 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=40.7 pTM=0.276 ipTM=0.111 tol=4.15
2024-07-13 12:40:35,282 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=41.5 pTM=0.281 ipTM=0.102 tol=2.73
2024-07-13 12:40:40,235 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=42.5 pTM=0.287 ipTM=0.117 tol=2.64
2024-07-13 12:40:45,196 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=42.4 pTM=0.284 ipTM=0.0986 tol=6.05
2024-07-13 12:40:50,147 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=42.8 pTM=0.29 ipTM=0.137 tol=4.66
2024-07-13 12:40:55,104 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=42.2 pTM=0.283 ipTM=0.099 tol=3.99
2024-07-13 12:41:00,058 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=42.6 pTM=0.29 ipTM=0.143 tol=3.99
2024-07-13 12:41:05,016 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=42.3 pTM=0.283 ipTM=0.0991 tol=4.45
2024-07-13 12:41:09,970 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=42.7 pTM=0.29 ipTM=0.145 tol=3.26
2024-07-13 12:41:14,931 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=42.4 pTM=0.282 ipTM=0.0988 tol=4.69
2024-07-13 12:41:19,879 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=42.8 pTM=0.29 ipTM=0.144 tol=4.78
2024-07-13 12:41:24,838 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=42.2 pTM=0.282 ipTM=0.0977 tol=5.46
2024-07-13 12:41:29,793 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=42.6 pTM=0.288 ipTM=0.13 tol=5.44
2024-07-13 12:41:34,754 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=42.3 pTM=0.282 ipTM=0.0989 tol=4.36
2024-07-13 12:41:39,710 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=42.6 pTM=0.288 ipTM=0.126 tol=3.82
2024-07-13 12:41:44,672 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=42.8 pTM=0.282 ipTM=0.0977 tol=3.8
2024-07-13 12:41:49,625 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=43.1 pTM=0.287 ipTM=0.121 tol=3
2024-07-13 12:41:54,583 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=42.8 pTM=0.282 ipTM=0.0984 tol=2.5
2024-07-13 12:41:59,542 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=42.5 pTM=0.288 ipTM=0.126 tol=3.17
2024-07-13 12:42:04,505 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=42.7 pTM=0.282 ipTM=0.1 tol=3.94
2024-07-13 12:42:09,459 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=42.4 pTM=0.287 ipTM=0.118 tol=3.33
2024-07-13 12:42:14,417 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=42.9 pTM=0.283 ipTM=0.0973 tol=4.94
2024-07-13 12:42:19,373 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=42.9 pTM=0.286 ipTM=0.113 tol=5.38
2024-07-13 12:42:24,334 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=42.8 pTM=0.284 ipTM=0.0998 tol=3.8
2024-07-13 12:42:29,290 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=42.7 pTM=0.288 ipTM=0.117 tol=4.73
2024-07-13 12:42:29,290 alphafold2_multimer_v3_model_5_seed_000 took 153.6s (30 recycles)
2024-07-13 12:42:29,447 reranking models by 'multimer' metric
2024-07-13 12:42:41,045 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-13 12:43:17,515 Relaxation took 48.1s
2024-07-13 12:43:17,515 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=43.7 pTM=0.292 ipTM=0.142
2024-07-13 12:43:36,668 Relaxation took 19.2s
2024-07-13 12:43:36,668 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=42.7 pTM=0.291 ipTM=0.128
2024-07-13 12:43:53,444 Relaxation took 16.8s
2024-07-13 12:43:53,444 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=42.7 pTM=0.288 ipTM=0.117
2024-07-13 12:44:13,401 Relaxation took 20.0s
2024-07-13 12:44:13,401 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=44.2 pTM=0.284 ipTM=0.114
2024-07-13 12:44:32,879 Relaxation took 19.5s
2024-07-13 12:44:32,879 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=37.7 pTM=0.244 ipTM=0.107
2024-07-13 12:44:34,342 Done