2024-07-13 13:04:37,594 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-13 13:04:37,926 Running on GPU 2024-07-13 13:04:48,142 Found 6 citations for tools or databases 2024-07-13 13:04:48,143 Query 1/1: THIC_WIPF2 (length 837) 2024-07-13 13:04:48,637 Sleeping for 8s. Reason: PENDING 2024-07-13 13:04:57,056 Sleeping for 8s. Reason: RUNNING 2024-07-13 13:05:05,495 Sleeping for 9s. Reason: RUNNING 2024-07-13 13:05:14,910 Sleeping for 7s. Reason: RUNNING 2024-07-13 13:05:22,338 Sleeping for 7s. Reason: RUNNING 2024-07-13 13:05:29,789 Sleeping for 5s. Reason: RUNNING 2024-07-13 13:05:35,197 Sleeping for 7s. Reason: RUNNING 2024-07-13 13:05:42,627 Sleeping for 9s. Reason: RUNNING 2024-07-13 13:05:52,060 Sleeping for 9s. Reason: RUNNING 2024-07-13 13:06:01,502 Sleeping for 9s. Reason: RUNNING 2024-07-13 13:06:10,920 Sleeping for 10s. Reason: RUNNING 2024-07-13 13:06:21,340 Sleeping for 9s. Reason: RUNNING 2024-07-13 13:06:30,778 Sleeping for 7s. Reason: RUNNING 2024-07-13 13:06:38,212 Sleeping for 9s. Reason: RUNNING 2024-07-13 13:06:47,632 Sleeping for 8s. Reason: RUNNING 2024-07-13 13:06:56,049 Sleeping for 6s. Reason: RUNNING 2024-07-13 13:07:07,137 Sleeping for 5s. Reason: PENDING 2024-07-13 13:07:12,553 Sleeping for 5s. Reason: RUNNING 2024-07-13 13:07:17,978 Sleeping for 5s. Reason: RUNNING 2024-07-13 13:07:27,675 Sleeping for 6s. Reason: RUNNING 2024-07-13 13:07:34,104 Sleeping for 7s. Reason: RUNNING 2024-07-13 13:07:41,538 Sleeping for 7s. Reason: RUNNING 2024-07-13 13:07:48,955 Sleeping for 5s. Reason: RUNNING 2024-07-13 13:07:54,377 Sleeping for 10s. Reason: RUNNING 2024-07-13 13:08:04,812 Sleeping for 9s. Reason: RUNNING 2024-07-13 13:08:14,237 Sleeping for 6s. Reason: RUNNING 2024-07-13 13:08:20,673 Sleeping for 9s. Reason: RUNNING 2024-07-13 13:08:30,079 Sleeping for 7s. Reason: RUNNING 2024-07-13 13:08:37,487 Sleeping for 9s. Reason: RUNNING 2024-07-13 13:08:46,921 Sleeping for 8s. Reason: RUNNING 2024-07-13 13:08:55,343 Sleeping for 6s. Reason: RUNNING 2024-07-13 13:09:05,274 Setting max_seq=508, max_extra_seq=2048 2024-07-13 13:13:00,213 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=59.6 pTM=0.521 ipTM=0.176 2024-07-13 13:13:14,885 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=60.1 pTM=0.519 ipTM=0.121 tol=15.3 2024-07-13 13:13:29,611 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=60.1 pTM=0.518 ipTM=0.118 tol=9.39 2024-07-13 13:13:44,414 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=59.9 pTM=0.519 ipTM=0.119 tol=4.56 2024-07-13 13:13:59,245 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=59.9 pTM=0.519 ipTM=0.12 tol=3.94 2024-07-13 13:14:14,084 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=60 pTM=0.519 ipTM=0.119 tol=4.33 2024-07-13 13:14:28,947 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=59.8 pTM=0.518 ipTM=0.121 tol=3.86 2024-07-13 13:14:43,800 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.9 pTM=0.518 ipTM=0.121 tol=5.2 2024-07-13 13:14:58,682 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=59.7 pTM=0.519 ipTM=0.163 tol=5.35 2024-07-13 13:15:13,573 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=59.5 pTM=0.521 ipTM=0.229 tol=3.3 2024-07-13 13:15:28,481 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=59.6 pTM=0.521 ipTM=0.311 tol=3.29 2024-07-13 13:15:43,383 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=59.3 pTM=0.521 ipTM=0.344 tol=3.61 2024-07-13 13:15:58,297 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=59.4 pTM=0.521 ipTM=0.35 tol=3.27 2024-07-13 13:16:13,217 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=58.8 pTM=0.521 ipTM=0.327 tol=4.73 2024-07-13 13:16:28,134 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=57.3 pTM=0.52 ipTM=0.322 tol=10.9 2024-07-13 13:16:43,072 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=58.8 pTM=0.521 ipTM=0.328 tol=10.4 2024-07-13 13:16:58,022 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=58.8 pTM=0.52 ipTM=0.301 tol=5.34 2024-07-13 13:17:12,974 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=59 pTM=0.52 ipTM=0.277 tol=4.57 2024-07-13 13:17:27,926 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=59.3 pTM=0.521 ipTM=0.242 tol=4.9 2024-07-13 13:17:42,874 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=59.4 pTM=0.521 ipTM=0.238 tol=3.04 2024-07-13 13:17:57,826 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=59.2 pTM=0.519 ipTM=0.232 tol=3.44 2024-07-13 13:18:12,785 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=59.5 pTM=0.52 ipTM=0.241 tol=4.47 2024-07-13 13:18:27,741 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60 pTM=0.521 ipTM=0.27 tol=3.74 2024-07-13 13:18:42,709 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=59.8 pTM=0.52 ipTM=0.267 tol=3.31 2024-07-13 13:18:57,675 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=59.9 pTM=0.52 ipTM=0.275 tol=3.25 2024-07-13 13:19:12,633 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60 pTM=0.52 ipTM=0.25 tol=3.04 2024-07-13 13:19:27,583 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.1 pTM=0.52 ipTM=0.215 tol=3.55 2024-07-13 13:19:42,532 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=59.9 pTM=0.519 ipTM=0.174 tol=1.95 2024-07-13 13:19:57,483 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=60.1 pTM=0.519 ipTM=0.144 tol=2.03 2024-07-13 13:20:12,412 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=59.7 pTM=0.518 ipTM=0.121 tol=2.74 2024-07-13 13:20:27,346 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=59.9 pTM=0.519 ipTM=0.12 tol=4.37 2024-07-13 13:20:27,346 alphafold2_multimer_v3_model_1_seed_000 took 624.5s (30 recycles) 2024-07-13 13:20:44,417 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=58.1 pTM=0.523 ipTM=0.125 2024-07-13 13:20:59,334 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=57.8 pTM=0.524 ipTM=0.124 tol=14 2024-07-13 13:21:14,274 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=57.4 pTM=0.523 ipTM=0.118 tol=7.99 2024-07-13 13:21:29,215 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=57.3 pTM=0.525 ipTM=0.122 tol=4.72 2024-07-13 13:21:44,183 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=57.3 pTM=0.524 ipTM=0.121 tol=4.09 2024-07-13 13:21:59,118 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=57.3 pTM=0.524 ipTM=0.121 tol=3.69 2024-07-13 13:22:14,087 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=57.1 pTM=0.524 ipTM=0.121 tol=2.83 2024-07-13 13:22:29,077 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=57.1 pTM=0.525 ipTM=0.123 tol=3.06 2024-07-13 13:22:44,053 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=57.3 pTM=0.524 ipTM=0.12 tol=3.47 2024-07-13 13:22:59,024 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=57.3 pTM=0.525 ipTM=0.122 tol=3.07 2024-07-13 13:23:13,986 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=57.4 pTM=0.524 ipTM=0.12 tol=2.98 2024-07-13 13:23:28,962 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=57.5 pTM=0.524 ipTM=0.12 tol=2.88 2024-07-13 13:23:43,936 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=57.6 pTM=0.525 ipTM=0.122 tol=3.46 2024-07-13 13:23:58,914 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=57.6 pTM=0.525 ipTM=0.122 tol=2.54 2024-07-13 13:24:13,904 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=57.5 pTM=0.524 ipTM=0.12 tol=2.41 2024-07-13 13:24:28,898 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=57.8 pTM=0.525 ipTM=0.121 tol=2.34 2024-07-13 13:24:43,892 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=57.6 pTM=0.524 ipTM=0.12 tol=2.45 2024-07-13 13:24:58,893 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=57.4 pTM=0.526 ipTM=0.152 tol=6.18 2024-07-13 13:25:13,882 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=57.6 pTM=0.527 ipTM=0.191 tol=2.5 2024-07-13 13:25:28,868 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=57.6 pTM=0.529 ipTM=0.391 tol=2.57 2024-07-13 13:25:43,852 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=57.6 pTM=0.531 ipTM=0.509 tol=2.6 2024-07-13 13:25:58,822 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=57.7 pTM=0.534 ipTM=0.597 tol=3.09 2024-07-13 13:26:13,792 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=58 pTM=0.534 ipTM=0.603 tol=2.48 2024-07-13 13:26:28,784 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=57.9 pTM=0.535 ipTM=0.599 tol=2.46 2024-07-13 13:26:43,779 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=57.9 pTM=0.535 ipTM=0.597 tol=2.35 2024-07-13 13:26:58,776 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=57.9 pTM=0.535 ipTM=0.586 tol=1.87 2024-07-13 13:27:13,775 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=57.9 pTM=0.535 ipTM=0.594 tol=2.29 2024-07-13 13:27:28,773 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=57.9 pTM=0.535 ipTM=0.605 tol=2.46 2024-07-13 13:27:43,749 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=57.8 pTM=0.535 ipTM=0.602 tol=2.06 2024-07-13 13:27:58,737 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=57.9 pTM=0.535 ipTM=0.591 tol=2.03 2024-07-13 13:28:13,731 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=58 pTM=0.535 ipTM=0.586 tol=1.89 2024-07-13 13:28:13,732 alphafold2_multimer_v3_model_2_seed_000 took 464.2s (30 recycles) 2024-07-13 13:28:29,159 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=57.4 pTM=0.518 ipTM=0.119 2024-07-13 13:28:44,183 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=57.4 pTM=0.523 ipTM=0.704 tol=15.5 2024-07-13 13:28:59,230 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=57 pTM=0.521 ipTM=0.609 tol=12.4 2024-07-13 13:29:14,266 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=56.7 pTM=0.524 ipTM=0.53 tol=8.75 2024-07-13 13:29:29,289 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=56.6 pTM=0.528 ipTM=0.498 tol=5.34 2024-07-13 13:29:44,308 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=56.6 pTM=0.529 ipTM=0.415 tol=2.84 2024-07-13 13:29:59,324 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=56.5 pTM=0.529 ipTM=0.38 tol=3.13 2024-07-13 13:30:14,330 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=56.8 pTM=0.53 ipTM=0.459 tol=1.46 2024-07-13 13:30:29,343 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=56.8 pTM=0.531 ipTM=0.491 tol=1.71 2024-07-13 13:30:44,325 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=56.8 pTM=0.531 ipTM=0.488 tol=1.94 2024-07-13 13:30:59,291 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=56.8 pTM=0.531 ipTM=0.488 tol=2.29 2024-07-13 13:31:14,266 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=56.7 pTM=0.53 ipTM=0.41 tol=2.24 2024-07-13 13:31:29,230 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=56.7 pTM=0.53 ipTM=0.326 tol=2.47 2024-07-13 13:31:44,204 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=56.8 pTM=0.529 ipTM=0.209 tol=2.33 2024-07-13 13:31:59,177 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=56.7 pTM=0.526 ipTM=0.192 tol=4.27 2024-07-13 13:32:14,148 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=56.8 pTM=0.527 ipTM=0.193 tol=2.08 2024-07-13 13:32:29,113 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=56.7 pTM=0.527 ipTM=0.187 tol=3.16 2024-07-13 13:32:44,078 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=56.6 pTM=0.526 ipTM=0.202 tol=3.14 2024-07-13 13:32:59,030 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=56.6 pTM=0.525 ipTM=0.186 tol=1.48 2024-07-13 13:33:13,973 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=56.6 pTM=0.527 ipTM=0.198 tol=2 2024-07-13 13:33:28,937 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=56.6 pTM=0.526 ipTM=0.207 tol=2.46 2024-07-13 13:33:43,903 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=56.5 pTM=0.527 ipTM=0.185 tol=2.68 2024-07-13 13:33:58,868 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=56.6 pTM=0.526 ipTM=0.177 tol=2.42 2024-07-13 13:34:13,846 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=56.6 pTM=0.526 ipTM=0.173 tol=2.6 2024-07-13 13:34:28,820 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=56.7 pTM=0.527 ipTM=0.188 tol=2.37 2024-07-13 13:34:43,799 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=56.7 pTM=0.527 ipTM=0.19 tol=2.06 2024-07-13 13:34:58,781 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=56.6 pTM=0.528 ipTM=0.185 tol=1.63 2024-07-13 13:35:13,764 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=56.7 pTM=0.527 ipTM=0.19 tol=1.72 2024-07-13 13:35:28,758 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=56.7 pTM=0.527 ipTM=0.187 tol=1.31 2024-07-13 13:35:43,756 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=56.6 pTM=0.527 ipTM=0.185 tol=1.45 2024-07-13 13:35:58,753 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=56.7 pTM=0.527 ipTM=0.189 tol=1.37 2024-07-13 13:35:58,754 alphafold2_multimer_v3_model_3_seed_000 took 464.6s (30 recycles) 2024-07-13 13:36:14,181 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=55.5 pTM=0.516 ipTM=0.177 2024-07-13 13:36:29,209 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=55.8 pTM=0.515 ipTM=0.125 tol=14.2 2024-07-13 13:36:44,229 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=56 pTM=0.515 ipTM=0.129 tol=9.12 2024-07-13 13:36:59,262 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=55.9 pTM=0.515 ipTM=0.125 tol=4.59 2024-07-13 13:37:14,305 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=55.8 pTM=0.515 ipTM=0.126 tol=2.82 2024-07-13 13:37:29,336 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=55.9 pTM=0.514 ipTM=0.12 tol=2.35 2024-07-13 13:37:44,375 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=55.8 pTM=0.514 ipTM=0.123 tol=2.55 2024-07-13 13:37:59,407 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=55.9 pTM=0.514 ipTM=0.123 tol=4.05 2024-07-13 13:38:14,445 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=55.8 pTM=0.515 ipTM=0.132 tol=4.34 2024-07-13 13:38:29,473 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=55.7 pTM=0.516 ipTM=0.159 tol=5.19 2024-07-13 13:38:44,507 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=56 pTM=0.519 ipTM=0.207 tol=7.16 2024-07-13 13:38:59,534 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=56 pTM=0.518 ipTM=0.185 tol=3.12 2024-07-13 13:39:14,556 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=56.1 pTM=0.52 ipTM=0.226 tol=3.5 2024-07-13 13:39:29,586 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=56.2 pTM=0.519 ipTM=0.182 tol=3.13 2024-07-13 13:39:44,601 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=56.2 pTM=0.518 ipTM=0.181 tol=1.83 2024-07-13 13:39:59,615 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=56.1 pTM=0.519 ipTM=0.181 tol=2.04 2024-07-13 13:40:14,625 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=56.1 pTM=0.519 ipTM=0.195 tol=2.07 2024-07-13 13:40:29,644 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=56.1 pTM=0.521 ipTM=0.198 tol=4.57 2024-07-13 13:40:44,668 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=56.1 pTM=0.52 ipTM=0.188 tol=4.09 2024-07-13 13:40:59,692 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=56.1 pTM=0.519 ipTM=0.19 tol=2.21 2024-07-13 13:41:14,720 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=56.1 pTM=0.52 ipTM=0.208 tol=1.65 2024-07-13 13:41:29,753 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=56 pTM=0.519 ipTM=0.179 tol=1.75 2024-07-13 13:41:44,789 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=56.1 pTM=0.519 ipTM=0.196 tol=2.36 2024-07-13 13:41:59,802 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=56.6 pTM=0.529 ipTM=0.574 tol=4.09 2024-07-13 13:42:14,829 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=56 pTM=0.522 ipTM=0.318 tol=5.27 2024-07-13 13:42:29,859 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=55.9 pTM=0.519 ipTM=0.182 tol=4.93 2024-07-13 13:42:44,878 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=56 pTM=0.517 ipTM=0.17 tol=3.34 2024-07-13 13:42:59,889 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=55.9 pTM=0.519 ipTM=0.185 tol=2.43 2024-07-13 13:43:14,906 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=55.9 pTM=0.518 ipTM=0.178 tol=1.78 2024-07-13 13:43:29,914 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=56 pTM=0.518 ipTM=0.191 tol=1.83 2024-07-13 13:43:44,933 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=56 pTM=0.517 ipTM=0.178 tol=2.08 2024-07-13 13:43:44,934 alphafold2_multimer_v3_model_4_seed_000 took 465.7s (30 recycles) 2024-07-13 13:44:00,386 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=56.1 pTM=0.519 ipTM=0.144 2024-07-13 13:44:15,438 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=56 pTM=0.518 ipTM=0.139 tol=12 2024-07-13 13:44:30,487 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=56 pTM=0.518 ipTM=0.142 tol=8.27 2024-07-13 13:44:45,536 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=56.2 pTM=0.519 ipTM=0.14 tol=6.11 2024-07-13 13:45:00,590 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=56.2 pTM=0.519 ipTM=0.133 tol=4.76 2024-07-13 13:45:15,648 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=56.3 pTM=0.518 ipTM=0.131 tol=3.08 2024-07-13 13:45:30,713 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=56.3 pTM=0.519 ipTM=0.149 tol=4.42 2024-07-13 13:45:45,789 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=56.4 pTM=0.521 ipTM=0.304 tol=2.79 2024-07-13 13:46:00,881 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=56.6 pTM=0.521 ipTM=0.496 tol=2.4 2024-07-13 13:46:15,970 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=56.5 pTM=0.521 ipTM=0.447 tol=2.5 2024-07-13 13:46:31,055 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=56.6 pTM=0.521 ipTM=0.362 tol=4.91 2024-07-13 13:46:46,141 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=56.4 pTM=0.519 ipTM=0.157 tol=4.25 2024-07-13 13:47:01,224 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=56.4 pTM=0.52 ipTM=0.141 tol=3.94 2024-07-13 13:47:16,310 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=56.4 pTM=0.519 ipTM=0.144 tol=4.54 2024-07-13 13:47:31,393 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=56.4 pTM=0.518 ipTM=0.138 tol=2.38 2024-07-13 13:47:46,470 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=56.6 pTM=0.521 ipTM=0.246 tol=3.47 2024-07-13 13:48:01,558 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=56.6 pTM=0.521 ipTM=0.452 tol=4.64 2024-07-13 13:48:16,657 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=56.6 pTM=0.521 ipTM=0.422 tol=4.01 2024-07-13 13:48:31,758 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=56.6 pTM=0.521 ipTM=0.338 tol=1.51 2024-07-13 13:48:46,860 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=56.5 pTM=0.519 ipTM=0.166 tol=1.76 2024-07-13 13:49:01,962 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=56.4 pTM=0.519 ipTM=0.139 tol=2.94 2024-07-13 13:49:17,064 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=56.4 pTM=0.519 ipTM=0.138 tol=3.22 2024-07-13 13:49:32,164 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=56.5 pTM=0.519 ipTM=0.139 tol=2.05 2024-07-13 13:49:47,265 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=56.4 pTM=0.519 ipTM=0.144 tol=2.12 2024-07-13 13:50:02,361 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=56.4 pTM=0.52 ipTM=0.184 tol=2.02 2024-07-13 13:50:17,463 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=56.6 pTM=0.521 ipTM=0.419 tol=2.61 2024-07-13 13:50:32,569 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=56.5 pTM=0.521 ipTM=0.419 tol=2.21 2024-07-13 13:50:47,669 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=56.3 pTM=0.52 ipTM=0.231 tol=1.81 2024-07-13 13:51:02,756 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=56.3 pTM=0.519 ipTM=0.142 tol=1.92 2024-07-13 13:51:17,861 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=56.3 pTM=0.518 ipTM=0.135 tol=5.52 2024-07-13 13:51:32,949 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=56.4 pTM=0.518 ipTM=0.136 tol=4.29 2024-07-13 13:51:32,950 alphafold2_multimer_v3_model_5_seed_000 took 467.6s (30 recycles) 2024-07-13 13:51:33,389 reranking models by 'multimer' metric 2024-07-13 13:52:00,211 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-13 13:53:04,898 Relaxation took 91.5s 2024-07-13 13:53:04,898 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=58 pTM=0.535 ipTM=0.586 2024-07-13 13:53:50,932 Relaxation took 46.0s 2024-07-13 13:53:50,932 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=56.7 pTM=0.527 ipTM=0.189 2024-07-13 13:54:48,781 Relaxation took 57.8s 2024-07-13 13:54:48,781 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=56 pTM=0.517 ipTM=0.178 2024-07-13 13:55:32,992 Relaxation took 44.2s 2024-07-13 13:55:32,992 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=56.4 pTM=0.518 ipTM=0.136 2024-07-13 13:56:20,295 Relaxation took 47.3s 2024-07-13 13:56:20,295 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=59.9 pTM=0.519 ipTM=0.12 2024-07-13 13:56:21,890 Done