2024-07-13 13:28:21,899 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-13 13:28:22,249 Running on GPU 2024-07-13 13:28:28,590 Found 6 citations for tools or databases 2024-07-13 13:28:28,590 Query 1/1: TIE2_EHD1 (length 1658) 2024-07-13 13:28:29,048 Sleeping for 10s. Reason: PENDING 2024-07-13 13:28:39,491 Sleeping for 7s. Reason: RUNNING 2024-07-13 13:28:46,928 Sleeping for 8s. Reason: RUNNING 2024-07-13 13:28:55,348 Sleeping for 8s. Reason: RUNNING 2024-07-13 13:29:03,768 Sleeping for 7s. Reason: RUNNING 2024-07-13 13:29:11,193 Sleeping for 8s. Reason: RUNNING 2024-07-13 13:29:19,614 Sleeping for 8s. Reason: RUNNING 2024-07-13 13:29:28,041 Sleeping for 6s. Reason: RUNNING 2024-07-13 13:29:34,476 Sleeping for 8s. Reason: RUNNING 2024-07-13 13:29:42,888 Sleeping for 9s. Reason: RUNNING 2024-07-13 13:29:52,319 Sleeping for 10s. Reason: RUNNING 2024-07-13 13:30:02,741 Sleeping for 6s. Reason: RUNNING 2024-07-13 13:30:09,165 Sleeping for 5s. Reason: RUNNING 2024-07-13 13:30:14,591 Sleeping for 8s. Reason: RUNNING 2024-07-13 13:30:23,043 Sleeping for 9s. Reason: RUNNING 2024-07-13 13:30:32,463 Sleeping for 9s. Reason: RUNNING 2024-07-13 13:30:41,901 Sleeping for 8s. Reason: RUNNING 2024-07-13 13:30:50,325 Sleeping for 8s. Reason: RUNNING 2024-07-13 13:30:58,750 Sleeping for 8s. Reason: RUNNING 2024-07-13 13:31:07,187 Sleeping for 7s. Reason: RUNNING 2024-07-13 13:31:14,627 Sleeping for 5s. Reason: RUNNING 2024-07-13 13:31:20,044 Sleeping for 6s. Reason: RUNNING 2024-07-13 13:31:26,477 Sleeping for 6s. Reason: RUNNING 2024-07-13 13:31:32,903 Sleeping for 10s. Reason: RUNNING 2024-07-13 13:31:43,334 Sleeping for 7s. Reason: RUNNING 2024-07-13 13:31:50,757 Sleeping for 10s. Reason: RUNNING 2024-07-13 13:32:01,178 Sleeping for 5s. Reason: RUNNING 2024-07-13 13:32:06,583 Sleeping for 10s. Reason: RUNNING 2024-07-13 13:32:17,014 Sleeping for 6s. Reason: RUNNING 2024-07-13 13:32:23,443 Sleeping for 8s. Reason: RUNNING 2024-07-13 13:32:31,891 Sleeping for 6s. Reason: RUNNING 2024-07-13 13:32:38,315 Sleeping for 5s. Reason: RUNNING 2024-07-13 13:32:43,740 Sleeping for 10s. Reason: RUNNING 2024-07-13 13:32:54,166 Sleeping for 5s. Reason: RUNNING 2024-07-13 13:32:59,576 Sleeping for 9s. Reason: RUNNING 2024-07-13 13:33:08,998 Sleeping for 9s. Reason: RUNNING 2024-07-13 13:33:18,421 Sleeping for 6s. Reason: RUNNING 2024-07-13 13:33:24,851 Sleeping for 6s. Reason: RUNNING 2024-07-13 13:33:31,277 Sleeping for 10s. Reason: RUNNING 2024-07-13 13:33:41,700 Sleeping for 5s. Reason: RUNNING 2024-07-13 13:33:47,114 Sleeping for 7s. Reason: RUNNING 2024-07-13 13:34:00,061 Sleeping for 5s. Reason: PENDING 2024-07-13 13:34:05,478 Sleeping for 5s. Reason: RUNNING 2024-07-13 13:34:10,908 Sleeping for 7s. Reason: RUNNING 2024-07-13 13:34:18,328 Sleeping for 10s. Reason: RUNNING 2024-07-13 13:34:28,758 Sleeping for 6s. Reason: RUNNING 2024-07-13 13:34:35,215 Sleeping for 8s. Reason: RUNNING 2024-07-13 13:34:43,648 Sleeping for 7s. Reason: RUNNING 2024-07-13 13:34:51,071 Sleeping for 7s. Reason: RUNNING 2024-07-13 13:34:58,512 Sleeping for 5s. Reason: RUNNING 2024-07-13 13:35:03,918 Sleeping for 5s. Reason: RUNNING 2024-07-13 13:35:09,329 Sleeping for 7s. Reason: RUNNING 2024-07-13 13:35:16,754 Sleeping for 9s. Reason: RUNNING 2024-07-13 13:35:26,178 Sleeping for 5s. Reason: RUNNING 2024-07-13 13:35:31,600 Sleeping for 10s. Reason: RUNNING 2024-07-13 13:35:42,049 Sleeping for 7s. Reason: RUNNING 2024-07-13 13:35:49,470 Sleeping for 8s. Reason: RUNNING 2024-07-13 13:35:57,888 Sleeping for 9s. Reason: RUNNING 2024-07-13 13:36:07,321 Sleeping for 8s. Reason: RUNNING 2024-07-13 13:36:15,757 Sleeping for 5s. Reason: RUNNING 2024-07-13 13:36:21,167 Sleeping for 7s. Reason: RUNNING 2024-07-13 13:36:28,597 Sleeping for 8s. Reason: RUNNING 2024-07-13 13:36:37,026 Sleeping for 5s. Reason: RUNNING 2024-07-13 13:36:42,455 Sleeping for 5s. Reason: RUNNING 2024-07-13 13:36:47,873 Sleeping for 5s. Reason: RUNNING 2024-07-13 13:36:53,300 Sleeping for 7s. Reason: RUNNING 2024-07-13 13:37:00,733 Sleeping for 10s. Reason: RUNNING 2024-07-13 13:37:11,160 Sleeping for 6s. Reason: RUNNING 2024-07-13 13:37:17,588 Sleeping for 7s. Reason: RUNNING 2024-07-13 13:37:25,016 Sleeping for 10s. Reason: RUNNING 2024-07-13 13:37:35,439 Sleeping for 6s. Reason: RUNNING 2024-07-13 13:37:49,026 Setting max_seq=508, max_extra_seq=2048 2024-07-13 13:42:40,208 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=70.6 pTM=0.364 ipTM=0.197 2024-07-13 13:44:06,468 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=72.1 pTM=0.39 ipTM=0.247 tol=9.93 2024-07-13 13:45:32,712 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=74.3 pTM=0.408 ipTM=0.269 tol=8.91 2024-07-13 13:46:59,044 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=74.7 pTM=0.408 ipTM=0.258 tol=6.27 2024-07-13 13:48:25,336 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=75.1 pTM=0.409 ipTM=0.254 tol=4.27 2024-07-13 13:49:51,630 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=75.1 pTM=0.41 ipTM=0.255 tol=2.23 2024-07-13 13:51:17,885 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=75.4 pTM=0.414 ipTM=0.254 tol=1.58 2024-07-13 13:52:44,177 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=75.3 pTM=0.413 ipTM=0.251 tol=0.923 2024-07-13 13:54:10,466 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=75.3 pTM=0.414 ipTM=0.253 tol=0.998 2024-07-13 13:55:36,795 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=75.4 pTM=0.414 ipTM=0.252 tol=0.935 2024-07-13 13:57:03,101 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=75.4 pTM=0.412 ipTM=0.244 tol=0.825 2024-07-13 13:58:29,362 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=75.7 pTM=0.414 ipTM=0.245 tol=0.691 2024-07-13 13:59:55,583 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=75.4 pTM=0.414 ipTM=0.249 tol=0.967 2024-07-13 14:01:21,857 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=75.8 pTM=0.415 ipTM=0.248 tol=1 2024-07-13 14:02:48,103 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=75.4 pTM=0.413 ipTM=0.245 tol=0.914 2024-07-13 14:04:14,371 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=75.5 pTM=0.412 ipTM=0.249 tol=0.84 2024-07-13 14:05:40,616 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=75.4 pTM=0.412 ipTM=0.244 tol=1.02 2024-07-13 14:07:06,860 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=75.5 pTM=0.414 ipTM=0.248 tol=0.909 2024-07-13 14:08:33,085 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=75.2 pTM=0.411 ipTM=0.244 tol=1.05 2024-07-13 14:09:59,328 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=75.4 pTM=0.412 ipTM=0.246 tol=1.17 2024-07-13 14:11:25,612 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=75.6 pTM=0.411 ipTM=0.243 tol=1.28 2024-07-13 14:12:51,878 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=75.2 pTM=0.412 ipTM=0.247 tol=1.03 2024-07-13 14:14:18,102 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=75.3 pTM=0.414 ipTM=0.243 tol=1.25 2024-07-13 14:15:44,351 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=75.4 pTM=0.415 ipTM=0.247 tol=0.819 2024-07-13 14:17:10,584 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=75.4 pTM=0.414 ipTM=0.243 tol=0.723 2024-07-13 14:18:36,849 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=75.6 pTM=0.416 ipTM=0.25 tol=0.75 2024-07-13 14:20:03,120 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=75.3 pTM=0.411 ipTM=0.246 tol=0.961 2024-07-13 14:21:29,360 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=75.3 pTM=0.411 ipTM=0.248 tol=1.07 2024-07-13 14:22:55,588 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=75.6 pTM=0.412 ipTM=0.249 tol=1.14 2024-07-13 14:24:21,806 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=75.6 pTM=0.414 ipTM=0.254 tol=0.984 2024-07-13 14:25:48,026 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=75.5 pTM=0.413 ipTM=0.245 tol=1.25 2024-07-13 14:25:48,028 alphafold2_multimer_v3_model_1_seed_000 took 2822.8s (30 recycles) 2024-07-13 14:27:15,993 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=70.6 pTM=0.39 ipTM=0.219 2024-07-13 14:28:42,191 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=74.2 pTM=0.424 ipTM=0.261 tol=14.8 2024-07-13 14:30:08,329 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=76.1 pTM=0.428 ipTM=0.276 tol=6.38 2024-07-13 14:31:34,485 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=76.6 pTM=0.428 ipTM=0.267 tol=2.31 2024-07-13 14:33:00,631 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=76.5 pTM=0.425 ipTM=0.254 tol=1.78 2024-07-13 14:34:26,749 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=76.6 pTM=0.428 ipTM=0.27 tol=1.81 2024-07-13 14:35:52,902 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=77.1 pTM=0.428 ipTM=0.268 tol=1.07 2024-07-13 14:37:19,039 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=76.8 pTM=0.427 ipTM=0.257 tol=1.43 2024-07-13 14:38:45,205 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=76.9 pTM=0.429 ipTM=0.265 tol=1.37 2024-07-13 14:40:11,393 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=77 pTM=0.43 ipTM=0.268 tol=0.807 2024-07-13 14:41:37,576 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=76.9 pTM=0.428 ipTM=0.265 tol=0.968 2024-07-13 14:43:03,767 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=76.9 pTM=0.426 ipTM=0.253 tol=1.46 2024-07-13 14:44:29,933 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=76.7 pTM=0.426 ipTM=0.261 tol=1.12 2024-07-13 14:45:56,083 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=76.9 pTM=0.428 ipTM=0.262 tol=0.839 2024-07-13 14:47:22,258 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=76.8 pTM=0.427 ipTM=0.261 tol=1.04 2024-07-13 14:48:48,424 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=76.8 pTM=0.429 ipTM=0.267 tol=0.727 2024-07-13 14:50:14,592 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=76.7 pTM=0.427 ipTM=0.266 tol=1.14 2024-07-13 14:51:40,734 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=76.8 pTM=0.428 ipTM=0.26 tol=0.856 2024-07-13 14:53:06,896 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=76.8 pTM=0.427 ipTM=0.264 tol=1.59 2024-07-13 14:54:33,044 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=76.8 pTM=0.426 ipTM=0.26 tol=1.32 2024-07-13 14:55:59,186 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=76.8 pTM=0.426 ipTM=0.259 tol=0.98 2024-07-13 14:57:25,351 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=76.6 pTM=0.428 ipTM=0.263 tol=1.11 2024-07-13 14:58:51,513 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=76.7 pTM=0.43 ipTM=0.266 tol=1.35 2024-07-13 15:00:17,669 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=76.8 pTM=0.429 ipTM=0.259 tol=1.06 2024-07-13 15:01:43,831 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=76.5 pTM=0.429 ipTM=0.265 tol=1.5 2024-07-13 15:03:10,012 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=76.9 pTM=0.428 ipTM=0.257 tol=0.985 2024-07-13 15:04:36,190 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=76.9 pTM=0.427 ipTM=0.262 tol=0.746 2024-07-13 15:06:02,301 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=76.8 pTM=0.428 ipTM=0.263 tol=0.931 2024-07-13 15:07:28,444 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=77.1 pTM=0.428 ipTM=0.267 tol=1.08 2024-07-13 15:08:54,613 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=76.6 pTM=0.426 ipTM=0.258 tol=1.51 2024-07-13 15:10:20,750 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=76.8 pTM=0.427 ipTM=0.268 tol=1.52 2024-07-13 15:10:20,751 alphafold2_multimer_v3_model_2_seed_000 took 2671.1s (30 recycles) 2024-07-13 15:11:48,676 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=72.6 pTM=0.403 ipTM=0.249 2024-07-13 15:13:14,935 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=74.8 pTM=0.418 ipTM=0.234 tol=10.1 2024-07-13 15:14:41,279 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=75.9 pTM=0.409 ipTM=0.219 tol=13.1 2024-07-13 15:16:07,540 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=75.8 pTM=0.408 ipTM=0.214 tol=8.69 2024-07-13 15:17:33,788 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=75.8 pTM=0.408 ipTM=0.212 tol=3.55 2024-07-13 15:19:00,014 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=75.9 pTM=0.409 ipTM=0.213 tol=2.54 2024-07-13 15:20:26,189 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=75.6 pTM=0.409 ipTM=0.216 tol=2.76 2024-07-13 15:21:52,352 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=75.7 pTM=0.409 ipTM=0.213 tol=2.68 2024-07-13 15:23:18,518 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=75.6 pTM=0.411 ipTM=0.219 tol=2.77 2024-07-13 15:24:44,653 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=76 pTM=0.412 ipTM=0.22 tol=2.03 2024-07-13 15:26:10,800 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=75.7 pTM=0.413 ipTM=0.217 tol=1.31 2024-07-13 15:27:36,965 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=76.1 pTM=0.414 ipTM=0.222 tol=1.08 2024-07-13 15:29:03,105 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=75.6 pTM=0.413 ipTM=0.221 tol=0.866 2024-07-13 15:30:29,274 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=75.9 pTM=0.414 ipTM=0.222 tol=0.974 2024-07-13 15:31:55,435 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=75.6 pTM=0.413 ipTM=0.221 tol=1.12 2024-07-13 15:33:21,580 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=75.7 pTM=0.413 ipTM=0.219 tol=1.03 2024-07-13 15:34:47,736 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=75.7 pTM=0.412 ipTM=0.218 tol=1.22 2024-07-13 15:36:13,910 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=75.7 pTM=0.413 ipTM=0.22 tol=0.826 2024-07-13 15:37:40,074 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=75.4 pTM=0.413 ipTM=0.221 tol=1.07 2024-07-13 15:39:06,246 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=75.6 pTM=0.413 ipTM=0.221 tol=1.18 2024-07-13 15:40:32,409 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=75.6 pTM=0.414 ipTM=0.221 tol=1.05 2024-07-13 15:41:58,523 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=75.4 pTM=0.413 ipTM=0.222 tol=0.931 2024-07-13 15:43:24,630 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=75.4 pTM=0.413 ipTM=0.223 tol=1.15 2024-07-13 15:44:50,775 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=75.6 pTM=0.414 ipTM=0.222 tol=1.15 2024-07-13 15:46:16,897 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=75.3 pTM=0.412 ipTM=0.221 tol=1.36 2024-07-13 15:47:43,060 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=75.7 pTM=0.413 ipTM=0.221 tol=0.959 2024-07-13 15:49:09,240 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=75.6 pTM=0.413 ipTM=0.221 tol=0.794 2024-07-13 15:50:35,421 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=75.6 pTM=0.413 ipTM=0.224 tol=0.766 2024-07-13 15:52:01,591 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=75.6 pTM=0.412 ipTM=0.222 tol=1.23 2024-07-13 15:53:27,725 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=75.7 pTM=0.412 ipTM=0.222 tol=0.925 2024-07-13 15:54:53,880 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=75.3 pTM=0.411 ipTM=0.219 tol=1.28 2024-07-13 15:54:53,882 alphafold2_multimer_v3_model_3_seed_000 took 2671.5s (30 recycles) 2024-07-13 15:56:21,856 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=69.3 pTM=0.4 ipTM=0.253 2024-07-13 15:57:48,184 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=73.9 pTM=0.413 ipTM=0.231 tol=7.02 2024-07-13 15:59:14,536 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=74.2 pTM=0.409 ipTM=0.218 tol=6.21 2024-07-13 16:00:40,841 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=73.9 pTM=0.414 ipTM=0.223 tol=2.48 2024-07-13 16:02:07,158 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=73.9 pTM=0.415 ipTM=0.224 tol=3.2 2024-07-13 16:03:33,454 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=74 pTM=0.417 ipTM=0.225 tol=2.29 2024-07-13 16:04:59,751 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=73.9 pTM=0.414 ipTM=0.221 tol=3.7 2024-07-13 16:06:26,036 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=73.9 pTM=0.415 ipTM=0.222 tol=3.33 2024-07-13 16:07:52,330 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=73.8 pTM=0.415 ipTM=0.224 tol=1.52 2024-07-13 16:09:18,616 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=74 pTM=0.414 ipTM=0.22 tol=2.29 2024-07-13 16:10:44,911 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=74.1 pTM=0.417 ipTM=0.221 tol=1.56 2024-07-13 16:12:11,152 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=74.5 pTM=0.419 ipTM=0.22 tol=1.65 2024-07-13 16:13:37,405 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=74.3 pTM=0.417 ipTM=0.222 tol=1.42 2024-07-13 16:15:03,660 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=74.2 pTM=0.416 ipTM=0.219 tol=1.75 2024-07-13 16:16:29,934 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=74.1 pTM=0.417 ipTM=0.222 tol=1.98 2024-07-13 16:17:56,197 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=73.9 pTM=0.417 ipTM=0.222 tol=1.58 2024-07-13 16:19:22,483 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=74.1 pTM=0.417 ipTM=0.22 tol=1.69 2024-07-13 16:20:48,726 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=73.8 pTM=0.415 ipTM=0.22 tol=1.85 2024-07-13 16:22:15,000 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=73.9 pTM=0.417 ipTM=0.224 tol=1.72 2024-07-13 16:23:41,320 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=74 pTM=0.417 ipTM=0.22 tol=1.74 2024-07-13 16:25:07,704 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=74.1 pTM=0.419 ipTM=0.221 tol=1.55 2024-07-13 16:26:34,073 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=73.9 pTM=0.421 ipTM=0.222 tol=1.86 2024-07-13 16:28:00,447 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=73.9 pTM=0.42 ipTM=0.22 tol=1.51 2024-07-13 16:29:26,740 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=73.8 pTM=0.419 ipTM=0.222 tol=1.53 2024-07-13 16:30:53,037 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=73.9 pTM=0.42 ipTM=0.22 tol=1.76 2024-07-13 16:32:19,304 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=74.2 pTM=0.42 ipTM=0.221 tol=1.74 2024-07-13 16:33:45,626 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=73.9 pTM=0.417 ipTM=0.216 tol=2.28 2024-07-13 16:35:11,958 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=73.8 pTM=0.42 ipTM=0.22 tol=1.89 2024-07-13 16:36:38,291 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=74.1 pTM=0.419 ipTM=0.221 tol=1.61 2024-07-13 16:38:04,636 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=74.1 pTM=0.418 ipTM=0.219 tol=3.21 2024-07-13 16:39:31,013 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=73.7 pTM=0.418 ipTM=0.221 tol=2.15 2024-07-13 16:39:31,015 alphafold2_multimer_v3_model_4_seed_000 took 2675.5s (30 recycles) 2024-07-13 16:40:59,036 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=70.5 pTM=0.399 ipTM=0.25 2024-07-13 16:42:25,251 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=74.6 pTM=0.42 ipTM=0.255 tol=10.7 2024-07-13 16:43:51,397 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=75.1 pTM=0.436 ipTM=0.301 tol=9.87 2024-07-13 16:45:17,549 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=75.2 pTM=0.435 ipTM=0.297 tol=2.66 2024-07-13 16:46:43,677 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=75.1 pTM=0.427 ipTM=0.266 tol=1.45 2024-07-13 16:48:09,825 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=75.1 pTM=0.425 ipTM=0.261 tol=1.79 2024-07-13 16:49:35,920 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=75 pTM=0.427 ipTM=0.267 tol=1.68 2024-07-13 16:51:02,046 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=74.8 pTM=0.421 ipTM=0.245 tol=1.95 2024-07-13 16:52:28,190 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=74.7 pTM=0.422 ipTM=0.244 tol=2.23 2024-07-13 16:53:54,359 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=74.9 pTM=0.42 ipTM=0.242 tol=1.31 2024-07-13 16:55:20,564 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=74.7 pTM=0.419 ipTM=0.234 tol=1.59 2024-07-13 16:56:46,798 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=74.8 pTM=0.417 ipTM=0.233 tol=1.66 2024-07-13 16:58:13,036 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=74.8 pTM=0.419 ipTM=0.241 tol=2.08 2024-07-13 16:59:39,283 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=73.3 pTM=0.422 ipTM=0.244 tol=13 2024-07-13 17:01:05,487 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=73.8 pTM=0.414 ipTM=0.233 tol=7.4 2024-07-13 17:02:31,654 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=74.4 pTM=0.417 ipTM=0.233 tol=5.13 2024-07-13 17:03:57,805 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=74.4 pTM=0.418 ipTM=0.24 tol=1.88 2024-07-13 17:05:23,929 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=74.8 pTM=0.421 ipTM=0.245 tol=2.35 2024-07-13 17:06:50,069 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=74.4 pTM=0.421 ipTM=0.249 tol=2.24 2024-07-13 17:08:16,254 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=74.7 pTM=0.421 ipTM=0.247 tol=2.56 2024-07-13 17:09:42,430 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=74.7 pTM=0.424 ipTM=0.256 tol=2.08 2024-07-13 17:11:08,611 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=74.4 pTM=0.42 ipTM=0.249 tol=2.08 2024-07-13 17:12:34,793 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=74.5 pTM=0.42 ipTM=0.24 tol=1.7 2024-07-13 17:14:00,944 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=74.5 pTM=0.418 ipTM=0.239 tol=1.13 2024-07-13 17:15:27,095 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=74.1 pTM=0.418 ipTM=0.24 tol=1.66 2024-07-13 17:16:53,284 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=74.8 pTM=0.419 ipTM=0.24 tol=1.51 2024-07-13 17:18:19,492 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=74.4 pTM=0.417 ipTM=0.24 tol=0.934 2024-07-13 17:19:45,735 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=74.6 pTM=0.416 ipTM=0.238 tol=1.44 2024-07-13 17:21:11,960 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=74.7 pTM=0.42 ipTM=0.245 tol=2.37 2024-07-13 17:22:38,190 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=75 pTM=0.424 ipTM=0.264 tol=2.35 2024-07-13 17:24:04,405 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=74.8 pTM=0.42 ipTM=0.249 tol=2.45 2024-07-13 17:24:04,406 alphafold2_multimer_v3_model_5_seed_000 took 2671.8s (30 recycles) 2024-07-13 17:24:06,013 reranking models by 'multimer' metric 2024-07-13 17:24:23,041 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-13 17:27:55,186 Relaxation took 229.2s 2024-07-13 17:27:55,186 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=76.8 pTM=0.427 ipTM=0.268 2024-07-13 17:33:05,718 Relaxation took 310.5s 2024-07-13 17:33:05,718 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=74.8 pTM=0.42 ipTM=0.249 2024-07-13 17:35:52,720 Relaxation took 167.0s 2024-07-13 17:35:52,720 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=75.5 pTM=0.413 ipTM=0.245 2024-07-13 17:40:09,156 Relaxation took 256.4s 2024-07-13 17:40:09,156 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=73.7 pTM=0.418 ipTM=0.221 2024-07-13 17:42:56,164 Relaxation took 167.0s 2024-07-13 17:42:56,164 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=75.3 pTM=0.411 ipTM=0.219 2024-07-13 17:43:08,823 Done