2024-07-13 13:34:22,416 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 13:34:31,074 Running on GPU
2024-07-13 13:34:46,099 Found 6 citations for tools or databases
2024-07-13 13:34:46,099 Query 1/1: TIM23_H2B1M (length 335)
2024-07-13 13:34:46,572 Sleeping for 7s. Reason: PENDING
2024-07-13 13:34:53,997 Sleeping for 9s. Reason: RUNNING
2024-07-13 13:35:04,983 Sleeping for 5s. Reason: PENDING
2024-07-13 13:35:10,419 Sleeping for 8s. Reason: RUNNING
2024-07-13 13:35:24,412 Setting max_seq=508, max_extra_seq=2048
2024-07-13 13:40:03,449 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=41.7 pTM=0.239 ipTM=0.0829
2024-07-13 13:40:07,938 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=39 pTM=0.206 ipTM=0.084 tol=6.41
2024-07-13 13:40:12,415 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=40.3 pTM=0.214 ipTM=0.0875 tol=5.89
2024-07-13 13:40:16,890 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=39.7 pTM=0.217 ipTM=0.0843 tol=2.21
2024-07-13 13:40:21,362 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=38.6 pTM=0.215 ipTM=0.0776 tol=3.37
2024-07-13 13:40:25,842 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=37.6 pTM=0.205 ipTM=0.0773 tol=7.06
2024-07-13 13:40:30,313 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=37.7 pTM=0.218 ipTM=0.0841 tol=6.13
2024-07-13 13:40:34,786 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=36.1 pTM=0.192 ipTM=0.0844 tol=5.45
2024-07-13 13:40:39,254 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=34.4 pTM=0.197 ipTM=0.0961 tol=4.55
2024-07-13 13:40:43,726 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=35 pTM=0.189 ipTM=0.0952 tol=3.22
2024-07-13 13:40:48,197 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=34.2 pTM=0.188 ipTM=0.0933 tol=3.3
2024-07-13 13:40:52,669 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=36.3 pTM=0.196 ipTM=0.0914 tol=5.28
2024-07-13 13:40:57,138 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=34.9 pTM=0.185 ipTM=0.0931 tol=3.94
2024-07-13 13:41:01,610 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=35.1 pTM=0.191 ipTM=0.0982 tol=4.33
2024-07-13 13:41:06,080 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=33.5 pTM=0.185 ipTM=0.101 tol=4.24
2024-07-13 13:41:10,553 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=34.8 pTM=0.194 ipTM=0.101 tol=2.44
2024-07-13 13:41:15,023 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=33.8 pTM=0.185 ipTM=0.0975 tol=2.43
2024-07-13 13:41:19,501 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=34.7 pTM=0.187 ipTM=0.0923 tol=5.78
2024-07-13 13:41:23,977 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=33.7 pTM=0.192 ipTM=0.105 tol=5.18
2024-07-13 13:41:28,454 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=34.8 pTM=0.194 ipTM=0.0978 tol=2.87
2024-07-13 13:41:32,929 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=33.2 pTM=0.186 ipTM=0.103 tol=3.29
2024-07-13 13:41:37,407 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=34.5 pTM=0.196 ipTM=0.101 tol=5.05
2024-07-13 13:41:41,879 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=33.8 pTM=0.193 ipTM=0.101 tol=2.87
2024-07-13 13:41:46,356 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=35.8 pTM=0.192 ipTM=0.095 tol=3.69
2024-07-13 13:41:50,827 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=34.5 pTM=0.199 ipTM=0.0987 tol=2.96
2024-07-13 13:41:55,304 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=33.6 pTM=0.197 ipTM=0.101 tol=5.9
2024-07-13 13:41:59,776 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=34.2 pTM=0.193 ipTM=0.0969 tol=6.66
2024-07-13 13:42:04,250 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=34.2 pTM=0.191 ipTM=0.0986 tol=2.67
2024-07-13 13:42:08,723 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=35 pTM=0.198 ipTM=0.0989 tol=2.86
2024-07-13 13:42:13,201 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=33.6 pTM=0.196 ipTM=0.102 tol=5.77
2024-07-13 13:42:17,675 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=34.7 pTM=0.19 ipTM=0.0954 tol=8.31
2024-07-13 13:42:17,681 alphafold2_multimer_v3_model_1_seed_000 took 357.5s (30 recycles)
2024-07-13 13:42:22,292 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=38.1 pTM=0.223 ipTM=0.0764
2024-07-13 13:42:26,773 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=36.5 pTM=0.205 ipTM=0.0852 tol=7.45
2024-07-13 13:42:31,244 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=36.7 pTM=0.218 ipTM=0.0903 tol=6.77
2024-07-13 13:42:35,718 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=37.2 pTM=0.223 ipTM=0.098 tol=2.32
2024-07-13 13:42:40,185 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=37 pTM=0.224 ipTM=0.0917 tol=2.22
2024-07-13 13:42:44,658 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=36.5 pTM=0.223 ipTM=0.0966 tol=4.09
2024-07-13 13:42:49,126 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=38.3 pTM=0.23 ipTM=0.0919 tol=3.82
2024-07-13 13:42:53,598 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=38 pTM=0.23 ipTM=0.0949 tol=2.26
2024-07-13 13:42:58,067 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=36.8 pTM=0.229 ipTM=0.0948 tol=2.63
2024-07-13 13:43:02,538 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=36.8 pTM=0.223 ipTM=0.0944 tol=2.05
2024-07-13 13:43:07,004 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=37.7 pTM=0.229 ipTM=0.0962 tol=3.02
2024-07-13 13:43:11,473 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=38.8 pTM=0.227 ipTM=0.0908 tol=3.8
2024-07-13 13:43:15,938 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=38.1 pTM=0.229 ipTM=0.0923 tol=4.32
2024-07-13 13:43:20,405 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=37.8 pTM=0.23 ipTM=0.1 tol=5.12
2024-07-13 13:43:24,870 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=37.8 pTM=0.231 ipTM=0.101 tol=3.28
2024-07-13 13:43:29,339 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=38.4 pTM=0.228 ipTM=0.0993 tol=1.57
2024-07-13 13:43:33,804 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=38.9 pTM=0.231 ipTM=0.0951 tol=3.42
2024-07-13 13:43:38,273 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=38.2 pTM=0.233 ipTM=0.0984 tol=2.6
2024-07-13 13:43:42,737 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=38.2 pTM=0.238 ipTM=0.103 tol=2.4
2024-07-13 13:43:47,205 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=37.3 pTM=0.237 ipTM=0.102 tol=3.32
2024-07-13 13:43:51,669 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=37.2 pTM=0.235 ipTM=0.102 tol=3.33
2024-07-13 13:43:56,136 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=37.1 pTM=0.229 ipTM=0.101 tol=2.3
2024-07-13 13:44:00,600 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=38.1 pTM=0.232 ipTM=0.102 tol=3.61
2024-07-13 13:44:05,068 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=39.3 pTM=0.237 ipTM=0.0995 tol=3.4
2024-07-13 13:44:09,533 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=39.3 pTM=0.23 ipTM=0.101 tol=3.16
2024-07-13 13:44:14,002 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=39.5 pTM=0.228 ipTM=0.0949 tol=2.71
2024-07-13 13:44:18,469 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=39.4 pTM=0.225 ipTM=0.0943 tol=3.89
2024-07-13 13:44:22,939 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=40.4 pTM=0.226 ipTM=0.0945 tol=2.88
2024-07-13 13:44:27,406 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=40.4 pTM=0.23 ipTM=0.0943 tol=5.21
2024-07-13 13:44:31,877 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=40.4 pTM=0.226 ipTM=0.0949 tol=2.82
2024-07-13 13:44:36,344 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=40.2 pTM=0.223 ipTM=0.0927 tol=3.54
2024-07-13 13:44:36,344 alphafold2_multimer_v3_model_2_seed_000 took 138.5s (30 recycles)
2024-07-13 13:44:40,948 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=33.4 pTM=0.211 ipTM=0.114
2024-07-13 13:44:45,426 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=32.3 pTM=0.228 ipTM=0.125 tol=7.04
2024-07-13 13:44:49,897 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=33.2 pTM=0.237 ipTM=0.127 tol=6.47
2024-07-13 13:44:54,369 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=36.1 pTM=0.292 ipTM=0.154 tol=8.33
2024-07-13 13:44:58,837 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=34.6 pTM=0.268 ipTM=0.145 tol=4.8
2024-07-13 13:45:03,309 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=34.2 pTM=0.255 ipTM=0.145 tol=2.67
2024-07-13 13:45:07,777 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=34.3 pTM=0.261 ipTM=0.146 tol=1.85
2024-07-13 13:45:12,247 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=34.3 pTM=0.262 ipTM=0.142 tol=1.92
2024-07-13 13:45:16,716 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=34.2 pTM=0.26 ipTM=0.146 tol=1.56
2024-07-13 13:45:21,186 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=35.2 pTM=0.278 ipTM=0.148 tol=1.62
2024-07-13 13:45:25,655 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=35.6 pTM=0.283 ipTM=0.153 tol=1.79
2024-07-13 13:45:30,127 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=36 pTM=0.292 ipTM=0.156 tol=2.45
2024-07-13 13:45:34,595 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=34.9 pTM=0.271 ipTM=0.144 tol=2.28
2024-07-13 13:45:39,064 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=35.1 pTM=0.275 ipTM=0.146 tol=1.74
2024-07-13 13:45:43,532 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=34.6 pTM=0.269 ipTM=0.155 tol=1.95
2024-07-13 13:45:48,004 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=35.9 pTM=0.289 ipTM=0.157 tol=1.63
2024-07-13 13:45:52,472 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=34.9 pTM=0.271 ipTM=0.157 tol=1.66
2024-07-13 13:45:56,944 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=34.5 pTM=0.266 ipTM=0.15 tol=2.29
2024-07-13 13:46:01,414 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=35.5 pTM=0.281 ipTM=0.167 tol=2.08
2024-07-13 13:46:05,885 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=34.7 pTM=0.269 ipTM=0.154 tol=2.98
2024-07-13 13:46:10,354 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=34.3 pTM=0.258 ipTM=0.156 tol=2.83
2024-07-13 13:46:14,826 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=34.6 pTM=0.28 ipTM=0.151 tol=2.71
2024-07-13 13:46:19,292 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=35.1 pTM=0.278 ipTM=0.157 tol=2.35
2024-07-13 13:46:23,766 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=34.9 pTM=0.28 ipTM=0.147 tol=2.14
2024-07-13 13:46:28,234 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=34.4 pTM=0.268 ipTM=0.155 tol=2.9
2024-07-13 13:46:32,705 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=34.9 pTM=0.285 ipTM=0.161 tol=2.32
2024-07-13 13:46:37,174 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=34.8 pTM=0.275 ipTM=0.162 tol=1.67
2024-07-13 13:46:41,647 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=35.4 pTM=0.29 ipTM=0.162 tol=3.71
2024-07-13 13:46:46,116 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=35.4 pTM=0.284 ipTM=0.16 tol=2.86
2024-07-13 13:46:50,589 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=35.3 pTM=0.284 ipTM=0.159 tol=2.81
2024-07-13 13:46:55,056 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=35.1 pTM=0.279 ipTM=0.16 tol=2.04
2024-07-13 13:46:55,056 alphafold2_multimer_v3_model_3_seed_000 took 138.6s (30 recycles)
2024-07-13 13:46:59,658 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=35.8 pTM=0.222 ipTM=0.108
2024-07-13 13:47:04,131 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=34 pTM=0.233 ipTM=0.146 tol=10.1
2024-07-13 13:47:08,600 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=35.5 pTM=0.263 ipTM=0.171 tol=6.73
2024-07-13 13:47:13,073 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=34.4 pTM=0.252 ipTM=0.148 tol=6.59
2024-07-13 13:47:17,542 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=34.8 pTM=0.252 ipTM=0.167 tol=4.17
2024-07-13 13:47:22,013 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=35.1 pTM=0.254 ipTM=0.148 tol=2.33
2024-07-13 13:47:26,481 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=35.8 pTM=0.25 ipTM=0.153 tol=2.25
2024-07-13 13:47:30,953 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=36.2 pTM=0.276 ipTM=0.149 tol=2.39
2024-07-13 13:47:35,422 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=35.4 pTM=0.245 ipTM=0.161 tol=2.52
2024-07-13 13:47:39,895 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=37 pTM=0.288 ipTM=0.156 tol=1.97
2024-07-13 13:47:44,365 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=36.5 pTM=0.266 ipTM=0.17 tol=2.43
2024-07-13 13:47:48,838 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=36.6 pTM=0.283 ipTM=0.143 tol=2.41
2024-07-13 13:47:53,308 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=35.4 pTM=0.247 ipTM=0.152 tol=2.44
2024-07-13 13:47:57,782 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=35.9 pTM=0.272 ipTM=0.137 tol=2.94
2024-07-13 13:48:02,252 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=35.5 pTM=0.253 ipTM=0.151 tol=2.63
2024-07-13 13:48:06,725 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=37.1 pTM=0.293 ipTM=0.143 tol=3.61
2024-07-13 13:48:11,196 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=35.7 pTM=0.26 ipTM=0.15 tol=2.69
2024-07-13 13:48:15,668 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=35.1 pTM=0.259 ipTM=0.146 tol=2.33
2024-07-13 13:48:20,139 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=34.6 pTM=0.237 ipTM=0.148 tol=2.12
2024-07-13 13:48:24,612 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=35.3 pTM=0.263 ipTM=0.168 tol=3.22
2024-07-13 13:48:29,082 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=34.8 pTM=0.242 ipTM=0.153 tol=2.81
2024-07-13 13:48:33,553 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=35.4 pTM=0.271 ipTM=0.159 tol=3.4
2024-07-13 13:48:38,023 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=35 pTM=0.248 ipTM=0.147 tol=3.04
2024-07-13 13:48:42,495 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=36.5 pTM=0.283 ipTM=0.172 tol=2.77
2024-07-13 13:48:46,962 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=35.1 pTM=0.25 ipTM=0.156 tol=2.13
2024-07-13 13:48:51,433 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=36.2 pTM=0.29 ipTM=0.171 tol=2.63
2024-07-13 13:48:55,901 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=35.1 pTM=0.248 ipTM=0.154 tol=3.62
2024-07-13 13:49:00,373 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=35.8 pTM=0.283 ipTM=0.163 tol=2.98
2024-07-13 13:49:04,840 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=36.2 pTM=0.265 ipTM=0.18 tol=3.23
2024-07-13 13:49:09,314 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=35.9 pTM=0.284 ipTM=0.162 tol=3.36
2024-07-13 13:49:13,782 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=36.2 pTM=0.27 ipTM=0.151 tol=3.57
2024-07-13 13:49:13,782 alphafold2_multimer_v3_model_4_seed_000 took 138.6s (30 recycles)
2024-07-13 13:49:18,382 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=31.7 pTM=0.193 ipTM=0.115
2024-07-13 13:49:22,859 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=32.1 pTM=0.237 ipTM=0.134 tol=8.13
2024-07-13 13:49:27,329 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=31.9 pTM=0.229 ipTM=0.129 tol=12.2
2024-07-13 13:49:31,797 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=30.7 pTM=0.214 ipTM=0.12 tol=4.39
2024-07-13 13:49:36,263 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=30.7 pTM=0.213 ipTM=0.125 tol=5.93
2024-07-13 13:49:40,734 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=30.9 pTM=0.232 ipTM=0.129 tol=3.82
2024-07-13 13:49:45,200 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=33.3 pTM=0.26 ipTM=0.128 tol=6.22
2024-07-13 13:49:49,671 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=31.6 pTM=0.241 ipTM=0.124 tol=7.68
2024-07-13 13:49:54,139 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=31.6 pTM=0.243 ipTM=0.131 tol=2.63
2024-07-13 13:49:58,610 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=31.7 pTM=0.237 ipTM=0.12 tol=3.3
2024-07-13 13:50:03,078 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=33.2 pTM=0.252 ipTM=0.124 tol=5.79
2024-07-13 13:50:07,548 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=32.8 pTM=0.247 ipTM=0.11 tol=6.67
2024-07-13 13:50:12,016 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=32.4 pTM=0.233 ipTM=0.113 tol=2.61
2024-07-13 13:50:16,487 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=32.9 pTM=0.242 ipTM=0.119 tol=3.88
2024-07-13 13:50:20,951 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=33.2 pTM=0.24 ipTM=0.121 tol=5.18
2024-07-13 13:50:25,420 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=33.4 pTM=0.247 ipTM=0.119 tol=4.2
2024-07-13 13:50:29,889 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=35.8 pTM=0.26 ipTM=0.118 tol=4.77
2024-07-13 13:50:34,361 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=34.3 pTM=0.249 ipTM=0.12 tol=4.73
2024-07-13 13:50:38,826 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=35.2 pTM=0.26 ipTM=0.131 tol=2.97
2024-07-13 13:50:43,297 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=34.2 pTM=0.243 ipTM=0.124 tol=2.38
2024-07-13 13:50:47,765 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=36.7 pTM=0.26 ipTM=0.13 tol=3.4
2024-07-13 13:50:52,239 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=34.3 pTM=0.243 ipTM=0.122 tol=3.54
2024-07-13 13:50:56,708 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=35.8 pTM=0.25 ipTM=0.123 tol=6.43
2024-07-13 13:51:01,185 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=37.1 pTM=0.251 ipTM=0.112 tol=7.84
2024-07-13 13:51:05,656 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=35.2 pTM=0.235 ipTM=0.111 tol=7.62
2024-07-13 13:51:10,129 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=36.1 pTM=0.249 ipTM=0.123 tol=2.77
2024-07-13 13:51:14,596 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=34.4 pTM=0.24 ipTM=0.121 tol=2.48
2024-07-13 13:51:19,066 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=34.4 pTM=0.248 ipTM=0.127 tol=3.06
2024-07-13 13:51:23,534 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=38.2 pTM=0.286 ipTM=0.136 tol=2.34
2024-07-13 13:51:28,006 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=34.2 pTM=0.254 ipTM=0.126 tol=3.04
2024-07-13 13:51:32,475 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=34.1 pTM=0.25 ipTM=0.121 tol=6.55
2024-07-13 13:51:32,476 alphafold2_multimer_v3_model_5_seed_000 took 138.6s (30 recycles)
2024-07-13 13:51:32,600 reranking models by 'multimer' metric
2024-07-13 13:51:57,937 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-13 13:52:31,820 Relaxation took 59.2s
2024-07-13 13:52:31,820 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=35.1 pTM=0.279 ipTM=0.16
2024-07-13 13:52:50,942 Relaxation took 19.1s
2024-07-13 13:52:50,942 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=36.2 pTM=0.27 ipTM=0.151
2024-07-13 13:53:15,026 Relaxation took 24.1s
2024-07-13 13:53:15,027 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=34.1 pTM=0.25 ipTM=0.121
2024-07-13 13:53:24,186 Relaxation took 9.2s
2024-07-13 13:53:24,186 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=40.2 pTM=0.223 ipTM=0.0927
2024-07-13 13:53:31,929 Relaxation took 7.7s
2024-07-13 13:53:31,929 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=34.7 pTM=0.19 ipTM=0.0954
2024-07-13 13:53:33,060 Done