2024-07-13 15:04:27,945 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 15:04:28,271 Running on GPU
2024-07-13 15:04:43,452 Found 6 citations for tools or databases
2024-07-13 15:04:43,452 Query 1/1: TMM51_KS6A5 (length 1055)
2024-07-13 15:04:43,900 Sleeping for 9s. Reason: PENDING
2024-07-13 15:04:53,299 Sleeping for 6s. Reason: RUNNING
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2024-07-13 15:05:34,430 Sleeping for 6s. Reason: RUNNING
2024-07-13 15:05:40,896 Sleeping for 8s. Reason: RUNNING
2024-07-13 15:05:49,309 Sleeping for 9s. Reason: RUNNING
2024-07-13 15:05:58,721 Sleeping for 10s. Reason: RUNNING
2024-07-13 15:06:09,147 Sleeping for 9s. Reason: RUNNING
2024-07-13 15:06:18,581 Sleeping for 8s. Reason: RUNNING
2024-07-13 15:06:27,023 Sleeping for 9s. Reason: RUNNING
2024-07-13 15:06:36,444 Sleeping for 8s. Reason: RUNNING
2024-07-13 15:06:44,881 Sleeping for 9s. Reason: RUNNING
2024-07-13 15:06:54,325 Sleeping for 6s. Reason: RUNNING
2024-07-13 15:07:00,736 Sleeping for 10s. Reason: RUNNING
2024-07-13 15:07:11,158 Sleeping for 6s. Reason: RUNNING
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2024-07-13 15:07:25,009 Sleeping for 7s. Reason: RUNNING
2024-07-13 15:07:32,429 Sleeping for 10s. Reason: RUNNING
2024-07-13 15:07:46,763 Sleeping for 8s. Reason: PENDING
2024-07-13 15:07:55,189 Sleeping for 10s. Reason: RUNNING
2024-07-13 15:08:05,610 Sleeping for 10s. Reason: RUNNING
2024-07-13 15:08:16,032 Sleeping for 8s. Reason: RUNNING
2024-07-13 15:08:24,454 Sleeping for 7s. Reason: RUNNING
2024-07-13 15:08:31,891 Sleeping for 7s. Reason: RUNNING
2024-07-13 15:08:39,319 Sleeping for 9s. Reason: RUNNING
2024-07-13 15:08:48,744 Sleeping for 6s. Reason: RUNNING
2024-07-13 15:08:55,157 Sleeping for 10s. Reason: RUNNING
2024-07-13 15:09:05,584 Sleeping for 5s. Reason: RUNNING
2024-07-13 15:09:10,989 Sleeping for 5s. Reason: RUNNING
2024-07-13 15:09:16,399 Sleeping for 9s. Reason: RUNNING
2024-07-13 15:09:25,830 Sleeping for 8s. Reason: RUNNING
2024-07-13 15:09:34,238 Sleeping for 9s. Reason: RUNNING
2024-07-13 15:09:43,657 Sleeping for 10s. Reason: RUNNING
2024-07-13 15:09:54,110 Sleeping for 10s. Reason: RUNNING
2024-07-13 15:10:04,538 Sleeping for 10s. Reason: RUNNING
2024-07-13 15:10:14,943 Sleeping for 7s. Reason: RUNNING
2024-07-13 15:10:22,367 Sleeping for 9s. Reason: RUNNING
2024-07-13 15:10:37,512 Setting max_seq=508, max_extra_seq=2048
2024-07-13 15:14:40,504 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=57 pTM=0.393 ipTM=0.172
2024-07-13 15:15:05,780 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=54.9 pTM=0.388 ipTM=0.174 tol=6.23
2024-07-13 15:15:31,148 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=55.1 pTM=0.383 ipTM=0.172 tol=4.38
2024-07-13 15:15:56,570 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=55.2 pTM=0.385 ipTM=0.183 tol=2.32
2024-07-13 15:16:22,034 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=55.5 pTM=0.387 ipTM=0.182 tol=2.03
2024-07-13 15:16:47,542 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=55.9 pTM=0.39 ipTM=0.187 tol=1.86
2024-07-13 15:17:13,070 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=55.3 pTM=0.387 ipTM=0.184 tol=1.35
2024-07-13 15:17:38,620 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=55.5 pTM=0.387 ipTM=0.183 tol=1.29
2024-07-13 15:18:04,168 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=55 pTM=0.388 ipTM=0.201 tol=1.68
2024-07-13 15:18:29,735 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=55.3 pTM=0.386 ipTM=0.195 tol=1.35
2024-07-13 15:18:55,298 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=55.3 pTM=0.389 ipTM=0.21 tol=1.52
2024-07-13 15:19:20,870 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=55.2 pTM=0.388 ipTM=0.194 tol=2.3
2024-07-13 15:19:46,433 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=55.1 pTM=0.388 ipTM=0.191 tol=1.76
2024-07-13 15:20:12,005 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=56 pTM=0.397 ipTM=0.318 tol=1.95
2024-07-13 15:20:37,572 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=56.8 pTM=0.398 ipTM=0.318 tol=1.87
2024-07-13 15:21:03,146 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=56.3 pTM=0.396 ipTM=0.309 tol=3.87
2024-07-13 15:21:28,718 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=56.4 pTM=0.397 ipTM=0.308 tol=2.17
2024-07-13 15:21:54,304 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=55.9 pTM=0.392 ipTM=0.29 tol=1.93
2024-07-13 15:22:19,885 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=56.2 pTM=0.395 ipTM=0.308 tol=1.35
2024-07-13 15:22:45,467 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=56.7 pTM=0.397 ipTM=0.315 tol=1.78
2024-07-13 15:23:11,043 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=56.9 pTM=0.4 ipTM=0.313 tol=1.6
2024-07-13 15:23:36,608 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=56.6 pTM=0.397 ipTM=0.305 tol=1.32
2024-07-13 15:24:02,166 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=56.5 pTM=0.397 ipTM=0.306 tol=1.56
2024-07-13 15:24:27,723 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=56.5 pTM=0.395 ipTM=0.306 tol=2.93
2024-07-13 15:24:53,287 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=56.8 pTM=0.401 ipTM=0.315 tol=1.73
2024-07-13 15:25:18,842 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=56.9 pTM=0.399 ipTM=0.308 tol=2.83
2024-07-13 15:25:44,399 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=56.7 pTM=0.397 ipTM=0.303 tol=1.62
2024-07-13 15:26:09,958 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=57 pTM=0.4 ipTM=0.315 tol=1.24
2024-07-13 15:26:35,524 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=56.9 pTM=0.399 ipTM=0.302 tol=1.29
2024-07-13 15:27:01,082 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=56.6 pTM=0.4 ipTM=0.303 tol=1.56
2024-07-13 15:27:26,651 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=57.3 pTM=0.404 ipTM=0.328 tol=1.98
2024-07-13 15:27:26,652 alphafold2_multimer_v3_model_1_seed_000 took 947.9s (30 recycles)
2024-07-13 15:27:52,943 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=58.7 pTM=0.407 ipTM=0.21
2024-07-13 15:28:18,566 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=59.4 pTM=0.4 ipTM=0.197 tol=7.45
2024-07-13 15:28:44,192 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=60.2 pTM=0.407 ipTM=0.202 tol=4.64
2024-07-13 15:29:09,839 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=61.3 pTM=0.415 ipTM=0.21 tol=3.74
2024-07-13 15:29:35,503 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=61.8 pTM=0.413 ipTM=0.199 tol=3.77
2024-07-13 15:30:01,171 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=62 pTM=0.414 ipTM=0.199 tol=2.36
2024-07-13 15:30:26,862 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.4 pTM=0.415 ipTM=0.239 tol=2.29
2024-07-13 15:30:52,532 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=62.6 pTM=0.418 ipTM=0.278 tol=1.44
2024-07-13 15:31:18,205 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62.7 pTM=0.419 ipTM=0.288 tol=1.24
2024-07-13 15:31:43,876 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=62.8 pTM=0.417 ipTM=0.282 tol=1
2024-07-13 15:32:09,541 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62.9 pTM=0.42 ipTM=0.292 tol=1.16
2024-07-13 15:32:35,195 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=63 pTM=0.42 ipTM=0.303 tol=1.22
2024-07-13 15:33:00,860 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=62.8 pTM=0.422 ipTM=0.29 tol=1.24
2024-07-13 15:33:26,525 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=62.8 pTM=0.42 ipTM=0.285 tol=1.21
2024-07-13 15:33:52,188 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=62.9 pTM=0.419 ipTM=0.278 tol=1
2024-07-13 15:34:17,851 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62.8 pTM=0.42 ipTM=0.285 tol=0.9
2024-07-13 15:34:43,517 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=63 pTM=0.421 ipTM=0.281 tol=0.761
2024-07-13 15:35:09,168 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62.6 pTM=0.418 ipTM=0.267 tol=1.05
2024-07-13 15:35:34,835 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=63 pTM=0.42 ipTM=0.296 tol=1.09
2024-07-13 15:36:00,486 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62.9 pTM=0.421 ipTM=0.326 tol=0.918
2024-07-13 15:36:26,139 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=63.1 pTM=0.425 ipTM=0.328 tol=0.999
2024-07-13 15:36:51,794 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62.9 pTM=0.421 ipTM=0.297 tol=0.819
2024-07-13 15:37:17,442 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62.7 pTM=0.418 ipTM=0.301 tol=1.51
2024-07-13 15:37:43,102 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=63 pTM=0.423 ipTM=0.302 tol=1.06
2024-07-13 15:38:08,779 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=62.6 pTM=0.419 ipTM=0.3 tol=1.29
2024-07-13 15:38:34,460 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=62.8 pTM=0.419 ipTM=0.294 tol=1.52
2024-07-13 15:39:00,127 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=62.7 pTM=0.42 ipTM=0.256 tol=1.22
2024-07-13 15:39:25,790 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.7 pTM=0.418 ipTM=0.251 tol=0.952
2024-07-13 15:39:51,455 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62.8 pTM=0.421 ipTM=0.312 tol=1.01
2024-07-13 15:40:17,108 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=62.9 pTM=0.421 ipTM=0.301 tol=1.6
2024-07-13 15:40:42,741 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=62.6 pTM=0.421 ipTM=0.272 tol=0.83
2024-07-13 15:40:42,742 alphafold2_multimer_v3_model_2_seed_000 took 795.4s (30 recycles)
2024-07-13 15:41:09,081 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=57.3 pTM=0.401 ipTM=0.207
2024-07-13 15:41:34,745 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=58.5 pTM=0.406 ipTM=0.234 tol=8.41
2024-07-13 15:42:00,393 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=58.2 pTM=0.406 ipTM=0.292 tol=6.23
2024-07-13 15:42:26,063 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=60.6 pTM=0.419 ipTM=0.365 tol=6.47
2024-07-13 15:42:51,715 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=60.5 pTM=0.42 ipTM=0.366 tol=3.9
2024-07-13 15:43:17,377 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=60.7 pTM=0.423 ipTM=0.38 tol=3.75
2024-07-13 15:43:43,038 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=60.7 pTM=0.417 ipTM=0.372 tol=4.32
2024-07-13 15:44:08,697 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=60.4 pTM=0.417 ipTM=0.378 tol=2.95
2024-07-13 15:44:34,366 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=60.5 pTM=0.416 ipTM=0.375 tol=2.56
2024-07-13 15:45:00,027 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=60.8 pTM=0.42 ipTM=0.38 tol=1.74
2024-07-13 15:45:25,699 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=61 pTM=0.421 ipTM=0.384 tol=1.61
2024-07-13 15:45:51,382 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=60.6 pTM=0.417 ipTM=0.381 tol=2.21
2024-07-13 15:46:17,075 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=60.8 pTM=0.419 ipTM=0.382 tol=1.89
2024-07-13 15:46:42,761 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=60.8 pTM=0.421 ipTM=0.386 tol=2.58
2024-07-13 15:47:08,466 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=60.7 pTM=0.418 ipTM=0.383 tol=1.63
2024-07-13 15:47:34,156 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=60.5 pTM=0.417 ipTM=0.38 tol=2.43
2024-07-13 15:47:59,866 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=60.9 pTM=0.421 ipTM=0.384 tol=1.71
2024-07-13 15:48:25,567 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=60.9 pTM=0.421 ipTM=0.39 tol=1.67
2024-07-13 15:48:51,290 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.1 pTM=0.422 ipTM=0.386 tol=1.69
2024-07-13 15:49:16,979 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=60.4 pTM=0.418 ipTM=0.384 tol=1.99
2024-07-13 15:49:42,681 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=60.2 pTM=0.417 ipTM=0.377 tol=1.56
2024-07-13 15:50:08,376 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=60.5 pTM=0.419 ipTM=0.383 tol=1.31
2024-07-13 15:50:34,078 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=60.4 pTM=0.417 ipTM=0.372 tol=1.29
2024-07-13 15:50:59,762 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=60.4 pTM=0.417 ipTM=0.38 tol=0.948
2024-07-13 15:51:25,445 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=60 pTM=0.415 ipTM=0.376 tol=1.18
2024-07-13 15:51:51,140 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=60.8 pTM=0.422 ipTM=0.382 tol=1.27
2024-07-13 15:52:16,830 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=60.7 pTM=0.42 ipTM=0.381 tol=1.91
2024-07-13 15:52:42,529 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=60.7 pTM=0.419 ipTM=0.385 tol=1.5
2024-07-13 15:53:08,222 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=60.7 pTM=0.419 ipTM=0.378 tol=1.61
2024-07-13 15:53:33,915 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=60.2 pTM=0.415 ipTM=0.376 tol=1.84
2024-07-13 15:53:59,598 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.1 pTM=0.416 ipTM=0.377 tol=1.74
2024-07-13 15:53:59,599 alphafold2_multimer_v3_model_3_seed_000 took 796.2s (30 recycles)
2024-07-13 15:54:25,982 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=57 pTM=0.415 ipTM=0.208
2024-07-13 15:54:51,656 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=56.4 pTM=0.402 ipTM=0.179 tol=9.37
2024-07-13 15:55:17,324 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=56.5 pTM=0.403 ipTM=0.296 tol=4.5
2024-07-13 15:55:43,008 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=57.1 pTM=0.404 ipTM=0.323 tol=3.72
2024-07-13 15:56:08,676 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=56.5 pTM=0.399 ipTM=0.341 tol=4.2
2024-07-13 15:56:34,337 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=56.7 pTM=0.397 ipTM=0.323 tol=4.98
2024-07-13 15:57:00,006 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=56.3 pTM=0.394 ipTM=0.319 tol=3.76
2024-07-13 15:57:25,692 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=56.4 pTM=0.395 ipTM=0.317 tol=3.22
2024-07-13 15:57:51,359 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=55.8 pTM=0.39 ipTM=0.297 tol=2.6
2024-07-13 15:58:17,017 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=55.7 pTM=0.392 ipTM=0.311 tol=3.94
2024-07-13 15:58:42,682 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=55.8 pTM=0.392 ipTM=0.307 tol=2.38
2024-07-13 15:59:08,334 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=55.7 pTM=0.396 ipTM=0.306 tol=2.27
2024-07-13 15:59:34,010 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=55.9 pTM=0.392 ipTM=0.317 tol=3.54
2024-07-13 15:59:59,673 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=55.7 pTM=0.395 ipTM=0.325 tol=2.39
2024-07-13 16:00:25,349 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=55.8 pTM=0.393 ipTM=0.32 tol=2.39
2024-07-13 16:00:51,012 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=55.6 pTM=0.394 ipTM=0.313 tol=3.96
2024-07-13 16:01:16,664 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=55.3 pTM=0.393 ipTM=0.306 tol=1.93
2024-07-13 16:01:42,326 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=55.4 pTM=0.394 ipTM=0.316 tol=3.85
2024-07-13 16:02:07,999 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=55.2 pTM=0.39 ipTM=0.315 tol=2.88
2024-07-13 16:02:33,660 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=55.3 pTM=0.393 ipTM=0.313 tol=4.68
2024-07-13 16:02:59,336 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=55.2 pTM=0.393 ipTM=0.324 tol=3.8
2024-07-13 16:03:25,013 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=54.9 pTM=0.39 ipTM=0.313 tol=3.53
2024-07-13 16:03:50,686 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=54.5 pTM=0.388 ipTM=0.305 tol=3.45
2024-07-13 16:04:16,357 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=55.3 pTM=0.391 ipTM=0.315 tol=3.63
2024-07-13 16:04:42,029 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=55.1 pTM=0.393 ipTM=0.319 tol=1.62
2024-07-13 16:05:07,695 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=55.5 pTM=0.391 ipTM=0.31 tol=2.08
2024-07-13 16:05:33,359 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=55.2 pTM=0.391 ipTM=0.319 tol=4.04
2024-07-13 16:05:59,048 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=55.5 pTM=0.392 ipTM=0.318 tol=2.93
2024-07-13 16:06:24,720 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=55.7 pTM=0.392 ipTM=0.319 tol=3.16
2024-07-13 16:06:50,408 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=55.6 pTM=0.393 ipTM=0.315 tol=5.52
2024-07-13 16:07:16,095 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=55.6 pTM=0.391 ipTM=0.327 tol=2.86
2024-07-13 16:07:16,096 alphafold2_multimer_v3_model_4_seed_000 took 795.8s (30 recycles)
2024-07-13 16:07:42,497 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=57 pTM=0.412 ipTM=0.248
2024-07-13 16:08:08,220 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=58.1 pTM=0.412 ipTM=0.338 tol=11.2
2024-07-13 16:08:33,951 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=58.8 pTM=0.42 ipTM=0.383 tol=5.46
2024-07-13 16:08:59,694 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=58.8 pTM=0.413 ipTM=0.383 tol=3.7
2024-07-13 16:09:25,423 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=59 pTM=0.418 ipTM=0.391 tol=2.34
2024-07-13 16:09:51,171 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=59.8 pTM=0.417 ipTM=0.402 tol=2.32
2024-07-13 16:10:16,907 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=59.4 pTM=0.416 ipTM=0.38 tol=1.62
2024-07-13 16:10:42,641 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=59.4 pTM=0.416 ipTM=0.383 tol=1.43
2024-07-13 16:11:08,372 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=59.6 pTM=0.421 ipTM=0.406 tol=2.29
2024-07-13 16:11:34,102 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=59.7 pTM=0.418 ipTM=0.385 tol=1.44
2024-07-13 16:11:59,832 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=59.4 pTM=0.418 ipTM=0.383 tol=2.42
2024-07-13 16:12:25,568 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=59.5 pTM=0.418 ipTM=0.38 tol=1.75
2024-07-13 16:12:51,302 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=59.2 pTM=0.417 ipTM=0.384 tol=1.55
2024-07-13 16:13:17,033 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=59.8 pTM=0.416 ipTM=0.389 tol=1.57
2024-07-13 16:13:42,753 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=59.9 pTM=0.417 ipTM=0.386 tol=1.48
2024-07-13 16:14:08,485 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=60.1 pTM=0.419 ipTM=0.389 tol=1.56
2024-07-13 16:14:34,200 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=59.9 pTM=0.417 ipTM=0.379 tol=1.48
2024-07-13 16:14:59,921 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=60 pTM=0.417 ipTM=0.389 tol=2.8
2024-07-13 16:15:25,649 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=60.1 pTM=0.419 ipTM=0.387 tol=1.47
2024-07-13 16:15:51,372 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=59.9 pTM=0.418 ipTM=0.394 tol=3.1
2024-07-13 16:16:17,103 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=59.9 pTM=0.419 ipTM=0.394 tol=2.77
2024-07-13 16:16:42,831 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=60 pTM=0.417 ipTM=0.39 tol=3
2024-07-13 16:17:08,567 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=60 pTM=0.417 ipTM=0.386 tol=1.79
2024-07-13 16:17:34,298 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=59.8 pTM=0.416 ipTM=0.388 tol=1.73
2024-07-13 16:18:00,033 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=59.8 pTM=0.417 ipTM=0.386 tol=3.04
2024-07-13 16:18:25,769 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=60.1 pTM=0.419 ipTM=0.385 tol=2.58
2024-07-13 16:18:51,488 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=59.8 pTM=0.417 ipTM=0.383 tol=2.36
2024-07-13 16:19:17,218 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=59.9 pTM=0.419 ipTM=0.389 tol=1.75
2024-07-13 16:19:42,936 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=60 pTM=0.419 ipTM=0.386 tol=2.38
2024-07-13 16:20:08,660 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=60 pTM=0.42 ipTM=0.383 tol=2.38
2024-07-13 16:20:34,383 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=59.9 pTM=0.418 ipTM=0.388 tol=2.62
2024-07-13 16:20:34,384 alphafold2_multimer_v3_model_5_seed_000 took 797.6s (30 recycles)
2024-07-13 16:20:35,071 reranking models by 'multimer' metric
2024-07-13 16:20:57,068 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-13 16:23:16,935 Relaxation took 161.9s
2024-07-13 16:23:16,935 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=59.9 pTM=0.418 ipTM=0.388
2024-07-13 16:24:50,386 Relaxation took 93.4s
2024-07-13 16:24:50,386 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.1 pTM=0.416 ipTM=0.377
2024-07-13 16:27:03,418 Relaxation took 133.0s
2024-07-13 16:27:03,418 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=57.3 pTM=0.404 ipTM=0.328
2024-07-13 16:28:35,059 Relaxation took 91.6s
2024-07-13 16:28:35,059 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=55.6 pTM=0.391 ipTM=0.327
2024-07-13 16:30:30,385 Relaxation took 115.3s
2024-07-13 16:30:30,386 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=62.6 pTM=0.421 ipTM=0.272
2024-07-13 16:30:32,280 Done