2024-07-13 15:53:33,539 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 15:53:33,888 Running on GPU
2024-07-13 15:53:52,979 Found 6 citations for tools or databases
2024-07-13 15:53:52,980 Query 1/1: TNR27_ARI3A (length 890)
2024-07-13 15:53:53,443 Sleeping for 10s. Reason: PENDING
2024-07-13 15:54:03,862 Sleeping for 10s. Reason: RUNNING
2024-07-13 15:54:14,297 Sleeping for 7s. Reason: RUNNING
2024-07-13 15:54:21,741 Sleeping for 5s. Reason: RUNNING
2024-07-13 15:54:27,162 Sleeping for 8s. Reason: RUNNING
2024-07-13 15:54:35,612 Sleeping for 10s. Reason: RUNNING
2024-07-13 15:54:46,035 Sleeping for 7s. Reason: RUNNING
2024-07-13 15:54:53,466 Sleeping for 10s. Reason: RUNNING
2024-07-13 15:55:03,914 Sleeping for 8s. Reason: RUNNING
2024-07-13 15:55:12,343 Sleeping for 5s. Reason: RUNNING
2024-07-13 15:55:19,415 Sleeping for 7s. Reason: PENDING
2024-07-13 15:55:26,834 Sleeping for 10s. Reason: RUNNING
2024-07-13 15:55:37,262 Sleeping for 10s. Reason: RUNNING
2024-07-13 15:55:47,687 Sleeping for 5s. Reason: RUNNING
2024-07-13 15:55:53,114 Sleeping for 6s. Reason: RUNNING
2024-07-13 15:55:59,544 Sleeping for 7s. Reason: RUNNING
2024-07-13 15:56:11,168 Setting max_seq=508, max_extra_seq=2048
2024-07-13 15:59:42,881 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=37.2 pTM=0.26 ipTM=0.175
2024-07-13 15:59:59,430 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=40 pTM=0.266 ipTM=0.207 tol=22.6
2024-07-13 16:00:16,040 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=39.9 pTM=0.25 ipTM=0.156 tol=15.2
2024-07-13 16:00:32,707 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=40.8 pTM=0.26 ipTM=0.174 tol=10.3
2024-07-13 16:00:49,431 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=40.9 pTM=0.254 ipTM=0.161 tol=7.52
2024-07-13 16:01:06,149 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=41.3 pTM=0.255 ipTM=0.165 tol=7.98
2024-07-13 16:01:22,870 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=41.3 pTM=0.254 ipTM=0.166 tol=4.84
2024-07-13 16:01:39,616 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=41.6 pTM=0.256 ipTM=0.168 tol=4.68
2024-07-13 16:01:56,357 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=41.4 pTM=0.256 ipTM=0.171 tol=3.91
2024-07-13 16:02:13,111 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=41.5 pTM=0.259 ipTM=0.176 tol=6.58
2024-07-13 16:02:29,907 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=41.2 pTM=0.256 ipTM=0.173 tol=4.76
2024-07-13 16:02:46,667 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=41.8 pTM=0.259 ipTM=0.174 tol=5.79
2024-07-13 16:03:03,429 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=41.6 pTM=0.258 ipTM=0.173 tol=3.23
2024-07-13 16:03:20,194 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=41.7 pTM=0.261 ipTM=0.182 tol=3.09
2024-07-13 16:03:36,970 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=41.5 pTM=0.257 ipTM=0.173 tol=2.67
2024-07-13 16:03:53,756 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=41.4 pTM=0.262 ipTM=0.186 tol=2.97
2024-07-13 16:04:10,595 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=41.2 pTM=0.256 ipTM=0.172 tol=3.13
2024-07-13 16:04:27,371 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=41.5 pTM=0.26 ipTM=0.182 tol=2.59
2024-07-13 16:04:44,142 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=41.6 pTM=0.255 ipTM=0.17 tol=3.3
2024-07-13 16:05:00,897 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=41.5 pTM=0.262 ipTM=0.187 tol=3.28
2024-07-13 16:05:17,671 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=41.5 pTM=0.257 ipTM=0.172 tol=2.53
2024-07-13 16:05:34,466 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=41.6 pTM=0.261 ipTM=0.184 tol=2.58
2024-07-13 16:05:51,258 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=41.3 pTM=0.256 ipTM=0.172 tol=2.4
2024-07-13 16:06:08,052 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=41.5 pTM=0.26 ipTM=0.182 tol=2.89
2024-07-13 16:06:24,819 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=41.3 pTM=0.257 ipTM=0.171 tol=3.19
2024-07-13 16:06:41,593 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=41.5 pTM=0.261 ipTM=0.183 tol=2.69
2024-07-13 16:06:58,356 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=41.2 pTM=0.255 ipTM=0.169 tol=2.77
2024-07-13 16:07:15,131 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=41.7 pTM=0.261 ipTM=0.186 tol=3.06
2024-07-13 16:07:31,916 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=41.2 pTM=0.255 ipTM=0.169 tol=3.48
2024-07-13 16:07:48,694 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=41.5 pTM=0.26 ipTM=0.18 tol=2.24
2024-07-13 16:08:05,466 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=41.3 pTM=0.254 ipTM=0.168 tol=2.67
2024-07-13 16:08:05,467 alphafold2_multimer_v3_model_1_seed_000 took 667.1s (30 recycles)
2024-07-13 16:08:22,637 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=36.2 pTM=0.257 ipTM=0.159
2024-07-13 16:08:39,386 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=39.2 pTM=0.256 ipTM=0.18 tol=20.2
2024-07-13 16:08:56,151 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=40.8 pTM=0.262 ipTM=0.171 tol=23.8
2024-07-13 16:09:12,898 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=42.3 pTM=0.294 ipTM=0.249 tol=15.2
2024-07-13 16:09:29,663 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=42.4 pTM=0.289 ipTM=0.231 tol=5.88
2024-07-13 16:09:46,436 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=42.3 pTM=0.267 ipTM=0.175 tol=7.31
2024-07-13 16:10:03,170 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=42.3 pTM=0.262 ipTM=0.156 tol=7.01
2024-07-13 16:10:19,928 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=42.4 pTM=0.257 ipTM=0.146 tol=2.81
2024-07-13 16:10:36,677 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=42.7 pTM=0.259 ipTM=0.146 tol=9.36
2024-07-13 16:10:53,429 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=42.2 pTM=0.255 ipTM=0.146 tol=9.27
2024-07-13 16:11:10,182 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=42.1 pTM=0.253 ipTM=0.147 tol=6.41
2024-07-13 16:11:26,945 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=42.4 pTM=0.254 ipTM=0.148 tol=3.94
2024-07-13 16:11:43,711 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=42.2 pTM=0.255 ipTM=0.151 tol=3.86
2024-07-13 16:12:00,504 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=42.3 pTM=0.255 ipTM=0.15 tol=2.94
2024-07-13 16:12:17,252 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=42.2 pTM=0.256 ipTM=0.153 tol=2.64
2024-07-13 16:12:34,023 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=42.1 pTM=0.254 ipTM=0.153 tol=3.38
2024-07-13 16:12:50,803 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=42.3 pTM=0.259 ipTM=0.156 tol=3.99
2024-07-13 16:13:07,581 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=42.3 pTM=0.258 ipTM=0.156 tol=3.81
2024-07-13 16:13:24,352 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=42.4 pTM=0.26 ipTM=0.158 tol=3.13
2024-07-13 16:13:41,125 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=42.5 pTM=0.259 ipTM=0.157 tol=4.1
2024-07-13 16:13:57,889 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=42.7 pTM=0.259 ipTM=0.159 tol=2.94
2024-07-13 16:14:14,654 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=42.6 pTM=0.258 ipTM=0.158 tol=2.66
2024-07-13 16:14:31,425 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=42.8 pTM=0.259 ipTM=0.157 tol=2.51
2024-07-13 16:14:48,207 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=42.6 pTM=0.258 ipTM=0.157 tol=2.41
2024-07-13 16:15:04,987 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=42.7 pTM=0.26 ipTM=0.157 tol=3.02
2024-07-13 16:15:21,755 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=42.6 pTM=0.259 ipTM=0.157 tol=5.12
2024-07-13 16:15:38,514 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=42.5 pTM=0.26 ipTM=0.158 tol=4.79
2024-07-13 16:15:55,280 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=42.5 pTM=0.259 ipTM=0.158 tol=3.46
2024-07-13 16:16:12,048 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=42.5 pTM=0.258 ipTM=0.158 tol=1.85
2024-07-13 16:16:28,825 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=42.3 pTM=0.258 ipTM=0.158 tol=2.51
2024-07-13 16:16:45,598 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=42.5 pTM=0.259 ipTM=0.158 tol=3.1
2024-07-13 16:16:45,599 alphafold2_multimer_v3_model_2_seed_000 took 519.6s (30 recycles)
2024-07-13 16:17:02,954 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=34.7 pTM=0.232 ipTM=0.136
2024-07-13 16:17:19,860 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=36 pTM=0.246 ipTM=0.146 tol=24.2
2024-07-13 16:17:36,779 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=38.3 pTM=0.25 ipTM=0.154 tol=20
2024-07-13 16:17:53,720 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=38.7 pTM=0.253 ipTM=0.152 tol=11
2024-07-13 16:18:10,660 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=39 pTM=0.254 ipTM=0.148 tol=7.75
2024-07-13 16:18:27,595 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=39.5 pTM=0.252 ipTM=0.145 tol=9.94
2024-07-13 16:18:44,562 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=39.5 pTM=0.258 ipTM=0.16 tol=7.79
2024-07-13 16:19:01,495 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=39.6 pTM=0.255 ipTM=0.152 tol=5.54
2024-07-13 16:19:18,430 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=39.4 pTM=0.26 ipTM=0.165 tol=5.35
2024-07-13 16:19:35,368 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=39.6 pTM=0.263 ipTM=0.173 tol=3.71
2024-07-13 16:19:52,293 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=39.8 pTM=0.262 ipTM=0.17 tol=3.68
2024-07-13 16:20:09,241 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=39.9 pTM=0.261 ipTM=0.166 tol=3.22
2024-07-13 16:20:26,185 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=39.9 pTM=0.265 ipTM=0.174 tol=2.78
2024-07-13 16:20:43,131 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=39.7 pTM=0.258 ipTM=0.161 tol=2.34
2024-07-13 16:21:00,072 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=39.7 pTM=0.262 ipTM=0.168 tol=3.5
2024-07-13 16:21:17,015 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=39.7 pTM=0.258 ipTM=0.156 tol=2.75
2024-07-13 16:21:33,956 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=39.8 pTM=0.258 ipTM=0.156 tol=3.74
2024-07-13 16:21:50,911 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=39.8 pTM=0.257 ipTM=0.156 tol=2.32
2024-07-13 16:22:07,851 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=39.9 pTM=0.259 ipTM=0.157 tol=3.28
2024-07-13 16:22:24,800 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=39.4 pTM=0.26 ipTM=0.163 tol=3.34
2024-07-13 16:22:41,750 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=39.9 pTM=0.259 ipTM=0.162 tol=5.46
2024-07-13 16:22:58,686 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=39.8 pTM=0.26 ipTM=0.163 tol=3.34
2024-07-13 16:23:15,632 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=40 pTM=0.258 ipTM=0.159 tol=4.49
2024-07-13 16:23:32,596 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=40.1 pTM=0.259 ipTM=0.158 tol=3.19
2024-07-13 16:23:49,544 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=40.2 pTM=0.258 ipTM=0.157 tol=2.54
2024-07-13 16:24:06,500 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=40.1 pTM=0.258 ipTM=0.156 tol=2.08
2024-07-13 16:24:23,443 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=40.2 pTM=0.259 ipTM=0.161 tol=1.89
2024-07-13 16:24:40,399 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=40.3 pTM=0.259 ipTM=0.157 tol=2.04
2024-07-13 16:24:57,395 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=40 pTM=0.258 ipTM=0.154 tol=2.2
2024-07-13 16:25:14,369 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=39.9 pTM=0.257 ipTM=0.152 tol=2.8
2024-07-13 16:25:31,308 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=40 pTM=0.259 ipTM=0.161 tol=3.04
2024-07-13 16:25:31,309 alphafold2_multimer_v3_model_3_seed_000 took 525.2s (30 recycles)
2024-07-13 16:25:48,623 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=34.9 pTM=0.258 ipTM=0.168
2024-07-13 16:26:05,488 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=37.7 pTM=0.267 ipTM=0.195 tol=20.6
2024-07-13 16:26:22,363 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=37.5 pTM=0.262 ipTM=0.183 tol=18.3
2024-07-13 16:26:39,263 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=37.7 pTM=0.251 ipTM=0.153 tol=15.9
2024-07-13 16:26:56,161 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=37.2 pTM=0.249 ipTM=0.152 tol=10.1
2024-07-13 16:27:13,066 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=38 pTM=0.249 ipTM=0.149 tol=12.1
2024-07-13 16:27:29,967 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=37.7 pTM=0.248 ipTM=0.149 tol=10.1
2024-07-13 16:27:46,869 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=37.7 pTM=0.247 ipTM=0.149 tol=8.83
2024-07-13 16:28:03,766 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=37.8 pTM=0.25 ipTM=0.156 tol=8.85
2024-07-13 16:28:20,677 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=38.1 pTM=0.246 ipTM=0.146 tol=5.4
2024-07-13 16:28:37,574 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=37.7 pTM=0.247 ipTM=0.15 tol=10.5
2024-07-13 16:28:54,474 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=38.2 pTM=0.246 ipTM=0.145 tol=10.4
2024-07-13 16:29:11,404 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=37.9 pTM=0.248 ipTM=0.149 tol=11.9
2024-07-13 16:29:28,343 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=38.1 pTM=0.246 ipTM=0.147 tol=9.81
2024-07-13 16:29:45,259 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=38.1 pTM=0.248 ipTM=0.15 tol=6.82
2024-07-13 16:30:02,152 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=38.1 pTM=0.248 ipTM=0.15 tol=4.96
2024-07-13 16:30:19,043 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=38.2 pTM=0.249 ipTM=0.151 tol=6.27
2024-07-13 16:30:35,955 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=38 pTM=0.248 ipTM=0.149 tol=6.83
2024-07-13 16:30:52,844 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=37.8 pTM=0.248 ipTM=0.149 tol=5.77
2024-07-13 16:31:09,775 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=37.5 pTM=0.248 ipTM=0.15 tol=8.38
2024-07-13 16:31:26,671 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=37.8 pTM=0.248 ipTM=0.149 tol=8.8
2024-07-13 16:31:43,571 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=37.8 pTM=0.249 ipTM=0.15 tol=8.9
2024-07-13 16:32:00,518 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=37.6 pTM=0.251 ipTM=0.158 tol=14.6
2024-07-13 16:32:17,431 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=38 pTM=0.248 ipTM=0.151 tol=11.6
2024-07-13 16:32:34,336 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=38.2 pTM=0.25 ipTM=0.15 tol=5.62
2024-07-13 16:32:51,263 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=37.9 pTM=0.248 ipTM=0.152 tol=5.08
2024-07-13 16:33:08,180 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=37.8 pTM=0.247 ipTM=0.151 tol=6.64
2024-07-13 16:33:25,110 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=38 pTM=0.249 ipTM=0.151 tol=6.06
2024-07-13 16:33:42,037 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=37.9 pTM=0.248 ipTM=0.153 tol=6.99
2024-07-13 16:33:58,965 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=38.1 pTM=0.249 ipTM=0.156 tol=4.2
2024-07-13 16:34:15,908 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=37.8 pTM=0.248 ipTM=0.153 tol=4.34
2024-07-13 16:34:15,909 alphafold2_multimer_v3_model_4_seed_000 took 524.1s (30 recycles)
2024-07-13 16:34:33,347 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=33.7 pTM=0.249 ipTM=0.153
2024-07-13 16:34:50,347 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=37.4 pTM=0.25 ipTM=0.15 tol=21.2
2024-07-13 16:35:07,363 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=39.3 pTM=0.253 ipTM=0.146 tol=14.4
2024-07-13 16:35:24,371 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=39.3 pTM=0.253 ipTM=0.146 tol=12.3
2024-07-13 16:35:41,366 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=39.7 pTM=0.251 ipTM=0.143 tol=8.93
2024-07-13 16:35:58,361 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=39.8 pTM=0.25 ipTM=0.145 tol=5.32
2024-07-13 16:36:15,355 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=39.8 pTM=0.255 ipTM=0.15 tol=3.45
2024-07-13 16:36:32,331 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=40 pTM=0.254 ipTM=0.148 tol=6.81
2024-07-13 16:36:49,324 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=39.7 pTM=0.256 ipTM=0.156 tol=6.26
2024-07-13 16:37:06,286 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=39.5 pTM=0.254 ipTM=0.152 tol=5.31
2024-07-13 16:37:23,259 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=39.5 pTM=0.254 ipTM=0.153 tol=7.07
2024-07-13 16:37:40,231 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=40.1 pTM=0.253 ipTM=0.147 tol=8.64
2024-07-13 16:37:57,204 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=40 pTM=0.257 ipTM=0.155 tol=5.47
2024-07-13 16:38:14,172 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=40 pTM=0.253 ipTM=0.147 tol=3.14
2024-07-13 16:38:31,132 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=39.8 pTM=0.256 ipTM=0.154 tol=4.54
2024-07-13 16:38:48,098 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=39.8 pTM=0.253 ipTM=0.146 tol=2.42
2024-07-13 16:39:05,068 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=39.8 pTM=0.255 ipTM=0.151 tol=4.25
2024-07-13 16:39:22,026 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=39.8 pTM=0.254 ipTM=0.151 tol=3.03
2024-07-13 16:39:38,993 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=39.9 pTM=0.255 ipTM=0.152 tol=5.13
2024-07-13 16:39:55,956 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=39.6 pTM=0.254 ipTM=0.151 tol=5.58
2024-07-13 16:40:12,923 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=39.8 pTM=0.257 ipTM=0.16 tol=3.88
2024-07-13 16:40:29,879 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=39.9 pTM=0.255 ipTM=0.151 tol=6.82
2024-07-13 16:40:46,836 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=39.8 pTM=0.257 ipTM=0.159 tol=5.81
2024-07-13 16:41:03,805 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=39.8 pTM=0.254 ipTM=0.15 tol=3.08
2024-07-13 16:41:20,768 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=39.9 pTM=0.259 ipTM=0.159 tol=2.78
2024-07-13 16:41:37,769 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=39.9 pTM=0.254 ipTM=0.151 tol=2.48
2024-07-13 16:41:54,725 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=39.7 pTM=0.259 ipTM=0.162 tol=5.72
2024-07-13 16:42:11,669 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=39.8 pTM=0.253 ipTM=0.15 tol=5.57
2024-07-13 16:42:28,613 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=39.6 pTM=0.256 ipTM=0.155 tol=5.73
2024-07-13 16:42:45,565 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=39.6 pTM=0.252 ipTM=0.147 tol=4.58
2024-07-13 16:43:02,505 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=39.3 pTM=0.256 ipTM=0.157 tol=3.57
2024-07-13 16:43:02,506 alphafold2_multimer_v3_model_5_seed_000 took 526.1s (30 recycles)
2024-07-13 16:43:03,004 reranking models by 'multimer' metric
2024-07-13 16:43:31,051 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-13 16:44:33,412 Relaxation took 90.4s
2024-07-13 16:44:33,412 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=41.3 pTM=0.254 ipTM=0.168
2024-07-13 16:45:24,270 Relaxation took 50.9s
2024-07-13 16:45:24,271 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=40 pTM=0.259 ipTM=0.161
2024-07-13 16:46:17,196 Relaxation took 52.9s
2024-07-13 16:46:17,196 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=42.5 pTM=0.259 ipTM=0.158
2024-07-13 16:47:24,567 Relaxation took 67.4s
2024-07-13 16:47:24,567 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=39.3 pTM=0.256 ipTM=0.157
2024-07-13 16:48:32,002 Relaxation took 67.4s
2024-07-13 16:48:32,002 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=37.8 pTM=0.248 ipTM=0.153
2024-07-13 16:48:34,066 Done