2024-07-13 16:05:46,516 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 16:05:46,864 Running on GPU
2024-07-13 16:05:53,773 Found 6 citations for tools or databases
2024-07-13 16:05:53,773 Query 1/1: TOP1_NPY2R (length 1146)
2024-07-13 16:05:54,254 Sleeping for 5s. Reason: PENDING
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2024-07-13 16:07:06,531 Sleeping for 9s. Reason: RUNNING
2024-07-13 16:07:15,966 Sleeping for 9s. Reason: RUNNING
2024-07-13 16:07:25,396 Sleeping for 5s. Reason: RUNNING
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2024-07-13 16:07:46,722 Sleeping for 7s. Reason: RUNNING
2024-07-13 16:07:55,977 Sleeping for 6s. Reason: PENDING
2024-07-13 16:08:02,429 Sleeping for 5s. Reason: RUNNING
2024-07-13 16:08:07,845 Sleeping for 7s. Reason: RUNNING
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2024-07-13 16:08:32,115 Sleeping for 5s. Reason: RUNNING
2024-07-13 16:08:37,534 Sleeping for 7s. Reason: RUNNING
2024-07-13 16:08:44,957 Sleeping for 9s. Reason: RUNNING
2024-07-13 16:08:54,390 Sleeping for 8s. Reason: RUNNING
2024-07-13 16:09:02,813 Sleeping for 5s. Reason: RUNNING
2024-07-13 16:09:08,238 Sleeping for 6s. Reason: RUNNING
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2024-07-13 16:09:20,088 Sleeping for 10s. Reason: RUNNING
2024-07-13 16:09:33,955 Setting max_seq=508, max_extra_seq=2048
2024-07-13 16:12:58,746 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=68.2 pTM=0.524 ipTM=0.236
2024-07-13 16:13:28,529 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=68.8 pTM=0.511 ipTM=0.203 tol=7.55
2024-07-13 16:13:58,450 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=68.4 pTM=0.491 ipTM=0.195 tol=3.79
2024-07-13 16:14:28,483 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=68.9 pTM=0.497 ipTM=0.19 tol=4.43
2024-07-13 16:14:58,543 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=68.9 pTM=0.498 ipTM=0.188 tol=3.03
2024-07-13 16:15:28,672 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=69.1 pTM=0.496 ipTM=0.183 tol=3.72
2024-07-13 16:15:58,805 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=69.1 pTM=0.499 ipTM=0.178 tol=4.89
2024-07-13 16:16:28,971 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=69.2 pTM=0.496 ipTM=0.174 tol=5.15
2024-07-13 16:16:59,190 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=69.4 pTM=0.498 ipTM=0.172 tol=4.74
2024-07-13 16:17:29,429 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=69.5 pTM=0.502 ipTM=0.175 tol=3.51
2024-07-13 16:17:59,629 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=69.4 pTM=0.504 ipTM=0.178 tol=5.01
2024-07-13 16:18:29,854 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=69.4 pTM=0.505 ipTM=0.176 tol=4.54
2024-07-13 16:19:00,154 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=69.5 pTM=0.506 ipTM=0.182 tol=4.77
2024-07-13 16:19:30,449 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=69.4 pTM=0.501 ipTM=0.17 tol=5.71
2024-07-13 16:20:00,750 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=69.4 pTM=0.504 ipTM=0.18 tol=3.2
2024-07-13 16:20:31,076 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=69.6 pTM=0.503 ipTM=0.172 tol=1.95
2024-07-13 16:21:01,332 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=69.4 pTM=0.504 ipTM=0.179 tol=1.82
2024-07-13 16:21:31,639 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=69.4 pTM=0.503 ipTM=0.176 tol=4.5
2024-07-13 16:22:01,907 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=69.5 pTM=0.504 ipTM=0.182 tol=2.15
2024-07-13 16:22:32,192 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=69.3 pTM=0.501 ipTM=0.178 tol=2.11
2024-07-13 16:23:02,427 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=69.5 pTM=0.504 ipTM=0.18 tol=1.81
2024-07-13 16:23:32,633 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=69.4 pTM=0.503 ipTM=0.177 tol=2.41
2024-07-13 16:24:02,827 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=69.4 pTM=0.505 ipTM=0.181 tol=2.6
2024-07-13 16:24:33,010 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=69.3 pTM=0.502 ipTM=0.177 tol=3.66
2024-07-13 16:25:03,225 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=69.5 pTM=0.505 ipTM=0.183 tol=3.24
2024-07-13 16:25:33,451 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=69.4 pTM=0.504 ipTM=0.18 tol=1.8
2024-07-13 16:26:03,691 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=69.4 pTM=0.506 ipTM=0.185 tol=2.95
2024-07-13 16:26:33,933 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=69.5 pTM=0.504 ipTM=0.177 tol=2.16
2024-07-13 16:27:04,171 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=69.3 pTM=0.506 ipTM=0.183 tol=3.26
2024-07-13 16:27:34,425 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=69.4 pTM=0.503 ipTM=0.173 tol=4.78
2024-07-13 16:28:04,667 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=69.4 pTM=0.504 ipTM=0.177 tol=3.58
2024-07-13 16:28:04,668 alphafold2_multimer_v3_model_1_seed_000 took 1080.2s (30 recycles)
2024-07-13 16:28:35,666 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=68.4 pTM=0.526 ipTM=0.269
2024-07-13 16:29:05,920 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=69.9 pTM=0.546 ipTM=0.277 tol=5.4
2024-07-13 16:29:36,162 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=69.9 pTM=0.54 ipTM=0.273 tol=3.55
2024-07-13 16:30:06,437 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=70.1 pTM=0.541 ipTM=0.266 tol=2.26
2024-07-13 16:30:36,698 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=70.2 pTM=0.55 ipTM=0.292 tol=1.1
2024-07-13 16:31:06,963 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=70.4 pTM=0.549 ipTM=0.293 tol=1.88
2024-07-13 16:31:37,224 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=70.4 pTM=0.543 ipTM=0.272 tol=1.53
2024-07-13 16:32:07,493 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=70.4 pTM=0.545 ipTM=0.269 tol=1.16
2024-07-13 16:32:37,816 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=70.4 pTM=0.543 ipTM=0.266 tol=1.23
2024-07-13 16:33:08,101 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=70.5 pTM=0.548 ipTM=0.281 tol=1.31
2024-07-13 16:33:38,462 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=70.5 pTM=0.546 ipTM=0.268 tol=1.16
2024-07-13 16:34:08,805 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=70.6 pTM=0.552 ipTM=0.28 tol=0.815
2024-07-13 16:34:39,071 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=70.5 pTM=0.546 ipTM=0.27 tol=0.57
2024-07-13 16:35:09,382 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=70.5 pTM=0.545 ipTM=0.265 tol=1.34
2024-07-13 16:35:39,641 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=70.3 pTM=0.543 ipTM=0.265 tol=1.54
2024-07-13 16:36:09,911 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=70.4 pTM=0.542 ipTM=0.262 tol=1.95
2024-07-13 16:36:40,154 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=70.3 pTM=0.545 ipTM=0.264 tol=1.24
2024-07-13 16:37:10,404 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=70.4 pTM=0.544 ipTM=0.262 tol=1.24
2024-07-13 16:37:40,642 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=70.4 pTM=0.542 ipTM=0.265 tol=0.54
2024-07-13 16:38:10,867 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=70.2 pTM=0.539 ipTM=0.255 tol=0.778
2024-07-13 16:38:41,088 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=70.2 pTM=0.54 ipTM=0.257 tol=0.94
2024-07-13 16:39:11,347 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=70.3 pTM=0.542 ipTM=0.267 tol=1.31
2024-07-13 16:39:41,600 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=70.4 pTM=0.546 ipTM=0.28 tol=1.37
2024-07-13 16:40:11,853 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=70.3 pTM=0.548 ipTM=0.284 tol=1.04
2024-07-13 16:40:42,109 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=70.4 pTM=0.548 ipTM=0.28 tol=0.812
2024-07-13 16:41:12,342 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=70.4 pTM=0.55 ipTM=0.292 tol=1.5
2024-07-13 16:41:42,569 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=70.3 pTM=0.546 ipTM=0.271 tol=1.94
2024-07-13 16:42:12,822 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=70.2 pTM=0.543 ipTM=0.268 tol=1.02
2024-07-13 16:42:43,074 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=70.2 pTM=0.542 ipTM=0.267 tol=1.34
2024-07-13 16:43:13,317 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=70.2 pTM=0.543 ipTM=0.263 tol=0.947
2024-07-13 16:43:43,555 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=70.1 pTM=0.539 ipTM=0.253 tol=0.895
2024-07-13 16:43:43,556 alphafold2_multimer_v3_model_2_seed_000 took 938.1s (30 recycles)
2024-07-13 16:44:14,729 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=67.8 pTM=0.469 ipTM=0.149
2024-07-13 16:44:45,031 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=69.1 pTM=0.513 ipTM=0.203 tol=19
2024-07-13 16:45:15,352 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=69.6 pTM=0.522 ipTM=0.222 tol=8.91
2024-07-13 16:45:45,645 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=70.7 pTM=0.568 ipTM=0.327 tol=7.57
2024-07-13 16:46:15,921 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=71.1 pTM=0.568 ipTM=0.32 tol=3.35
2024-07-13 16:46:46,201 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=71.1 pTM=0.58 ipTM=0.339 tol=2.15
2024-07-13 16:47:16,466 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=70.9 pTM=0.568 ipTM=0.315 tol=1.48
2024-07-13 16:47:46,742 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=70.6 pTM=0.562 ipTM=0.292 tol=1.55
2024-07-13 16:48:17,018 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=70.9 pTM=0.559 ipTM=0.287 tol=1.35
2024-07-13 16:48:47,301 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=70.8 pTM=0.555 ipTM=0.268 tol=1.37
2024-07-13 16:49:17,576 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=70.6 pTM=0.546 ipTM=0.248 tol=1.26
2024-07-13 16:49:47,857 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=70.6 pTM=0.554 ipTM=0.267 tol=1.66
2024-07-13 16:50:18,140 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=70.5 pTM=0.548 ipTM=0.258 tol=1.78
2024-07-13 16:50:48,414 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=70.6 pTM=0.549 ipTM=0.254 tol=2.57
2024-07-13 16:51:18,644 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=70.4 pTM=0.545 ipTM=0.25 tol=2.03
2024-07-13 16:51:48,906 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=70.7 pTM=0.55 ipTM=0.251 tol=1.84
2024-07-13 16:52:19,136 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=70.6 pTM=0.542 ipTM=0.238 tol=1.76
2024-07-13 16:52:49,369 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=70.4 pTM=0.544 ipTM=0.242 tol=1.77
2024-07-13 16:53:19,596 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=70.6 pTM=0.547 ipTM=0.252 tol=1.87
2024-07-13 16:53:49,820 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=70.3 pTM=0.547 ipTM=0.255 tol=1.69
2024-07-13 16:54:20,030 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=70.5 pTM=0.549 ipTM=0.261 tol=0.9
2024-07-13 16:54:50,239 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=70.4 pTM=0.544 ipTM=0.244 tol=1.42
2024-07-13 16:55:20,444 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=70.4 pTM=0.546 ipTM=0.25 tol=1.46
2024-07-13 16:55:50,637 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=70.3 pTM=0.546 ipTM=0.245 tol=1.92
2024-07-13 16:56:20,852 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=70.3 pTM=0.544 ipTM=0.246 tol=1.48
2024-07-13 16:56:51,059 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=70.2 pTM=0.544 ipTM=0.245 tol=1.61
2024-07-13 16:57:21,268 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=70.2 pTM=0.543 ipTM=0.241 tol=2.57
2024-07-13 16:57:51,476 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=70.2 pTM=0.545 ipTM=0.245 tol=2.64
2024-07-13 16:58:21,686 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=70.2 pTM=0.542 ipTM=0.236 tol=1.88
2024-07-13 16:58:51,898 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=70.4 pTM=0.553 ipTM=0.26 tol=1.44
2024-07-13 16:59:22,096 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=70.8 pTM=0.55 ipTM=0.259 tol=1.52
2024-07-13 16:59:22,097 alphafold2_multimer_v3_model_3_seed_000 took 937.7s (30 recycles)
2024-07-13 16:59:53,101 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=67.6 pTM=0.469 ipTM=0.16
2024-07-13 17:00:23,360 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=68.9 pTM=0.504 ipTM=0.163 tol=6.46
2024-07-13 17:00:53,642 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=69.5 pTM=0.513 ipTM=0.164 tol=7.23
2024-07-13 17:01:23,944 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=69.8 pTM=0.506 ipTM=0.164 tol=3.7
2024-07-13 17:01:54,245 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=70.1 pTM=0.523 ipTM=0.189 tol=4.5
2024-07-13 17:02:24,550 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=70.2 pTM=0.52 ipTM=0.177 tol=3.3
2024-07-13 17:02:54,875 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=70.2 pTM=0.519 ipTM=0.173 tol=2.21
2024-07-13 17:03:25,213 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=70.2 pTM=0.517 ipTM=0.163 tol=1.77
2024-07-13 17:03:55,556 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=70.1 pTM=0.516 ipTM=0.164 tol=1.89
2024-07-13 17:04:25,929 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=70.3 pTM=0.517 ipTM=0.162 tol=1.17
2024-07-13 17:04:56,300 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=70.4 pTM=0.517 ipTM=0.161 tol=1.16
2024-07-13 17:05:26,677 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=70.5 pTM=0.518 ipTM=0.162 tol=1.38
2024-07-13 17:05:57,054 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=70.6 pTM=0.514 ipTM=0.159 tol=1.55
2024-07-13 17:06:27,425 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.4 pTM=0.514 ipTM=0.159 tol=1.88
2024-07-13 17:06:57,768 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=70.3 pTM=0.514 ipTM=0.159 tol=1.32
2024-07-13 17:07:28,117 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.5 pTM=0.515 ipTM=0.159 tol=2.39
2024-07-13 17:07:58,451 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.4 pTM=0.515 ipTM=0.16 tol=1.53
2024-07-13 17:08:28,796 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=70.2 pTM=0.514 ipTM=0.16 tol=1.95
2024-07-13 17:08:59,167 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=70.4 pTM=0.515 ipTM=0.161 tol=1.76
2024-07-13 17:09:29,531 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70.3 pTM=0.515 ipTM=0.158 tol=2.65
2024-07-13 17:09:59,898 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70.5 pTM=0.516 ipTM=0.16 tol=2.65
2024-07-13 17:10:30,275 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=70.4 pTM=0.517 ipTM=0.159 tol=1.6
2024-07-13 17:11:00,638 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=70.2 pTM=0.514 ipTM=0.159 tol=1.21
2024-07-13 17:11:31,024 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=70.3 pTM=0.513 ipTM=0.157 tol=1.68
2024-07-13 17:12:01,391 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=70.2 pTM=0.512 ipTM=0.156 tol=1.44
2024-07-13 17:12:31,740 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.2 pTM=0.513 ipTM=0.156 tol=2.18
2024-07-13 17:13:02,091 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.2 pTM=0.512 ipTM=0.155 tol=4.52
2024-07-13 17:13:32,441 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=70.2 pTM=0.511 ipTM=0.154 tol=4.81
2024-07-13 17:14:02,796 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=70.3 pTM=0.513 ipTM=0.154 tol=8.08
2024-07-13 17:14:33,129 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=70.5 pTM=0.518 ipTM=0.158 tol=7.72
2024-07-13 17:15:03,467 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70.4 pTM=0.513 ipTM=0.158 tol=5.95
2024-07-13 17:15:03,468 alphafold2_multimer_v3_model_4_seed_000 took 940.6s (30 recycles)
2024-07-13 17:15:34,536 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=67.3 pTM=0.484 ipTM=0.204
2024-07-13 17:16:04,804 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=68.4 pTM=0.499 ipTM=0.213 tol=10.5
2024-07-13 17:16:35,092 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=68.8 pTM=0.513 ipTM=0.201 tol=6.88
2024-07-13 17:17:05,453 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=70 pTM=0.524 ipTM=0.187 tol=4.97
2024-07-13 17:17:35,791 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=70.1 pTM=0.518 ipTM=0.175 tol=4.78
2024-07-13 17:18:06,122 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=70.1 pTM=0.522 ipTM=0.177 tol=7.51
2024-07-13 17:18:36,424 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=70.2 pTM=0.522 ipTM=0.177 tol=4.05
2024-07-13 17:19:06,726 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=70.2 pTM=0.526 ipTM=0.181 tol=6.68
2024-07-13 17:19:37,022 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=70.4 pTM=0.533 ipTM=0.197 tol=5.25
2024-07-13 17:20:07,347 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=70.5 pTM=0.535 ipTM=0.196 tol=6.11
2024-07-13 17:20:37,650 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=70.6 pTM=0.539 ipTM=0.208 tol=4.08
2024-07-13 17:21:07,937 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=70.5 pTM=0.538 ipTM=0.202 tol=3.11
2024-07-13 17:21:38,245 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=70.4 pTM=0.533 ipTM=0.193 tol=4.16
2024-07-13 17:22:08,526 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=70.4 pTM=0.535 ipTM=0.198 tol=4.84
2024-07-13 17:22:38,808 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=70.3 pTM=0.536 ipTM=0.203 tol=3.69
2024-07-13 17:23:09,112 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=70.6 pTM=0.539 ipTM=0.204 tol=4.11
2024-07-13 17:23:39,381 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=70.4 pTM=0.536 ipTM=0.2 tol=2.71
2024-07-13 17:24:09,638 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=70.2 pTM=0.536 ipTM=0.203 tol=5.01
2024-07-13 17:24:39,904 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=70.3 pTM=0.536 ipTM=0.203 tol=2.94
2024-07-13 17:25:10,156 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=70.2 pTM=0.533 ipTM=0.196 tol=4.45
2024-07-13 17:25:40,441 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=70.6 pTM=0.534 ipTM=0.193 tol=3.95
2024-07-13 17:26:10,725 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=70.6 pTM=0.532 ipTM=0.192 tol=2.71
2024-07-13 17:26:41,018 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=70.2 pTM=0.529 ipTM=0.182 tol=1.96
2024-07-13 17:27:11,305 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=70.4 pTM=0.532 ipTM=0.19 tol=3.99
2024-07-13 17:27:41,599 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=70.4 pTM=0.533 ipTM=0.191 tol=5.11
2024-07-13 17:28:11,899 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=70.4 pTM=0.533 ipTM=0.194 tol=5.14
2024-07-13 17:28:42,194 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=70.2 pTM=0.534 ipTM=0.193 tol=5.3
2024-07-13 17:29:12,495 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=70.5 pTM=0.536 ipTM=0.196 tol=6.69
2024-07-13 17:29:42,793 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=70.2 pTM=0.535 ipTM=0.196 tol=3.47
2024-07-13 17:30:13,117 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=70.4 pTM=0.533 ipTM=0.188 tol=3.93
2024-07-13 17:30:43,427 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=70.2 pTM=0.534 ipTM=0.195 tol=2.31
2024-07-13 17:30:43,428 alphafold2_multimer_v3_model_5_seed_000 took 939.2s (30 recycles)
2024-07-13 17:30:44,223 reranking models by 'multimer' metric
2024-07-13 17:30:45,763 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-13 17:32:29,852 Relaxation took 105.6s
2024-07-13 17:32:29,852 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=70.8 pTM=0.55 ipTM=0.259
2024-07-13 17:35:32,554 Relaxation took 182.7s
2024-07-13 17:35:32,555 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=70.1 pTM=0.539 ipTM=0.253
2024-07-13 17:37:21,816 Relaxation took 109.3s
2024-07-13 17:37:21,816 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=70.2 pTM=0.534 ipTM=0.195
2024-07-13 17:39:23,252 Relaxation took 121.4s
2024-07-13 17:39:23,252 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=69.4 pTM=0.504 ipTM=0.177
2024-07-13 17:41:52,657 Relaxation took 149.4s
2024-07-13 17:41:52,657 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70.4 pTM=0.513 ipTM=0.158
2024-07-13 17:41:58,750 Done