2024-07-13 16:11:55,601 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 16:11:55,912 Running on GPU
2024-07-13 16:11:59,936 Found 6 citations for tools or databases
2024-07-13 16:11:59,936 Query 1/1: TOP2A_GABP1 (length 1926)
2024-07-13 16:12:00,410 Sleeping for 7s. Reason: PENDING
2024-07-13 16:12:07,817 Sleeping for 7s. Reason: RUNNING
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2024-07-13 16:14:59,127 Sleeping for 10s. Reason: RUNNING
2024-07-13 16:15:09,569 Sleeping for 5s. Reason: RUNNING
2024-07-13 16:15:19,461 Sleeping for 9s. Reason: PENDING
2024-07-13 16:15:28,898 Sleeping for 7s. Reason: RUNNING
2024-07-13 16:15:36,319 Sleeping for 10s. Reason: RUNNING
2024-07-13 16:15:46,729 Sleeping for 10s. Reason: RUNNING
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2024-07-13 16:16:16,010 Sleeping for 10s. Reason: RUNNING
2024-07-13 16:16:26,437 Sleeping for 7s. Reason: RUNNING
2024-07-13 16:16:33,849 Sleeping for 5s. Reason: RUNNING
2024-07-13 16:16:39,277 Sleeping for 8s. Reason: RUNNING
2024-07-13 16:16:47,699 Sleeping for 5s. Reason: RUNNING
2024-07-13 16:16:53,108 Sleeping for 9s. Reason: RUNNING
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2024-07-13 16:17:10,948 Sleeping for 6s. Reason: RUNNING
2024-07-13 16:17:17,363 Sleeping for 5s. Reason: RUNNING
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2024-07-13 16:17:45,002 Sleeping for 6s. Reason: RUNNING
2024-07-13 16:17:51,409 Sleeping for 6s. Reason: RUNNING
2024-07-13 16:17:57,831 Sleeping for 7s. Reason: RUNNING
2024-07-13 16:18:05,262 Sleeping for 9s. Reason: RUNNING
2024-07-13 16:18:14,708 Sleeping for 7s. Reason: RUNNING
2024-07-13 16:18:22,132 Sleeping for 6s. Reason: RUNNING
2024-07-13 16:18:28,553 Sleeping for 9s. Reason: RUNNING
2024-07-13 16:18:37,991 Sleeping for 8s. Reason: RUNNING
2024-07-13 16:18:54,694 Setting max_seq=508, max_extra_seq=2048
2024-07-13 16:24:36,404 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=66.3 pTM=0.501 ipTM=0.198
2024-07-13 16:26:57,578 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66.2 pTM=0.509 ipTM=0.198 tol=13.1
2024-07-13 16:29:18,735 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=65.9 pTM=0.505 ipTM=0.196 tol=12.2
2024-07-13 16:31:39,859 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=66.6 pTM=0.51 ipTM=0.205 tol=8.86
2024-07-13 16:34:01,011 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=66.6 pTM=0.511 ipTM=0.229 tol=6.17
2024-07-13 16:36:22,184 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66.6 pTM=0.515 ipTM=0.233 tol=4.68
2024-07-13 16:38:43,315 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=66.4 pTM=0.512 ipTM=0.227 tol=3.7
2024-07-13 16:41:04,425 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=66.5 pTM=0.512 ipTM=0.23 tol=3.22
2024-07-13 16:43:25,502 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.6 pTM=0.513 ipTM=0.221 tol=2.73
2024-07-13 16:45:46,513 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=66.6 pTM=0.513 ipTM=0.216 tol=2.95
2024-07-13 16:48:07,571 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=66.6 pTM=0.512 ipTM=0.223 tol=2.42
2024-07-13 16:50:28,612 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66.6 pTM=0.511 ipTM=0.221 tol=2.41
2024-07-13 16:52:49,650 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=66.5 pTM=0.513 ipTM=0.209 tol=1.83
2024-07-13 16:55:10,690 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=66.3 pTM=0.512 ipTM=0.211 tol=2.94
2024-07-13 16:57:31,741 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=66.4 pTM=0.514 ipTM=0.212 tol=2.63
2024-07-13 16:59:52,778 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=66.6 pTM=0.514 ipTM=0.212 tol=2.1
2024-07-13 17:02:13,844 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=66.7 pTM=0.512 ipTM=0.212 tol=1.99
2024-07-13 17:04:34,929 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=66.7 pTM=0.514 ipTM=0.209 tol=2.41
2024-07-13 17:06:56,036 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=66.6 pTM=0.514 ipTM=0.208 tol=1.87
2024-07-13 17:09:17,120 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=66.4 pTM=0.509 ipTM=0.208 tol=1.73
2024-07-13 17:11:38,237 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=66.5 pTM=0.511 ipTM=0.208 tol=1.79
2024-07-13 17:13:59,378 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.6 pTM=0.512 ipTM=0.208 tol=1.92
2024-07-13 17:16:20,492 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=66.4 pTM=0.511 ipTM=0.206 tol=1.5
2024-07-13 17:18:41,583 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66.4 pTM=0.511 ipTM=0.206 tol=2.59
2024-07-13 17:21:02,709 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=66.4 pTM=0.51 ipTM=0.205 tol=2.9
2024-07-13 17:23:23,830 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=66.3 pTM=0.509 ipTM=0.206 tol=2.15
2024-07-13 17:25:44,962 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=66.4 pTM=0.514 ipTM=0.209 tol=2.26
2024-07-13 17:28:06,095 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=66.6 pTM=0.515 ipTM=0.221 tol=2.2
2024-07-13 17:30:27,199 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=66.4 pTM=0.512 ipTM=0.224 tol=2.7
2024-07-13 17:32:48,296 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.6 pTM=0.514 ipTM=0.219 tol=2.33
2024-07-13 17:35:09,370 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=66.6 pTM=0.514 ipTM=0.217 tol=1.78
2024-07-13 17:35:09,372 alphafold2_multimer_v3_model_1_seed_000 took 4530.3s (30 recycles)
2024-07-13 17:37:32,931 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=65.6 pTM=0.508 ipTM=0.211
2024-07-13 17:39:54,184 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=65.9 pTM=0.529 ipTM=0.26 tol=13
2024-07-13 17:42:15,451 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.6 pTM=0.528 ipTM=0.282 tol=7.38
2024-07-13 17:44:36,687 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=67 pTM=0.529 ipTM=0.285 tol=6.74
2024-07-13 17:46:57,901 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=66.9 pTM=0.53 ipTM=0.273 tol=7.54
2024-07-13 17:49:19,110 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67.2 pTM=0.542 ipTM=0.262 tol=3.81
2024-07-13 17:51:40,313 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=67.2 pTM=0.544 ipTM=0.257 tol=3.45
2024-07-13 17:54:01,500 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=67.1 pTM=0.539 ipTM=0.25 tol=3.37
2024-07-13 17:56:22,711 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=67.1 pTM=0.538 ipTM=0.231 tol=3.6
2024-07-13 17:58:43,930 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=67.2 pTM=0.542 ipTM=0.231 tol=3.04
2024-07-13 18:01:05,147 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=67.2 pTM=0.54 ipTM=0.236 tol=3.12
2024-07-13 18:03:26,368 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=67.1 pTM=0.538 ipTM=0.229 tol=2.18
2024-07-13 18:05:47,577 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=67.2 pTM=0.543 ipTM=0.218 tol=2.2
2024-07-13 18:08:08,767 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=66.9 pTM=0.538 ipTM=0.217 tol=2.99
2024-07-13 18:10:29,965 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=67.1 pTM=0.544 ipTM=0.218 tol=2.21
2024-07-13 18:12:51,188 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=67.1 pTM=0.542 ipTM=0.216 tol=2.62
2024-07-13 18:15:12,438 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=67.1 pTM=0.543 ipTM=0.215 tol=2.22
2024-07-13 18:17:33,658 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=67.2 pTM=0.545 ipTM=0.213 tol=2.61
2024-07-13 18:19:54,924 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=67 pTM=0.547 ipTM=0.209 tol=3.41
2024-07-13 18:22:16,211 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=66.9 pTM=0.548 ipTM=0.208 tol=2.59
2024-07-13 18:24:37,497 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=67 pTM=0.55 ipTM=0.21 tol=5.22
2024-07-13 18:26:58,803 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=66.9 pTM=0.544 ipTM=0.204 tol=3.97
2024-07-13 18:29:20,107 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=67 pTM=0.544 ipTM=0.205 tol=5.66
2024-07-13 18:31:41,366 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=67.1 pTM=0.544 ipTM=0.206 tol=4.08
2024-07-13 18:34:02,666 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=66.8 pTM=0.543 ipTM=0.207 tol=2.91
2024-07-13 18:36:23,935 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=66.8 pTM=0.54 ipTM=0.205 tol=2.3
2024-07-13 18:38:45,181 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=66.8 pTM=0.55 ipTM=0.209 tol=2.41
2024-07-13 18:41:06,443 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=67 pTM=0.546 ipTM=0.208 tol=3.08
2024-07-13 18:43:27,666 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=66.9 pTM=0.545 ipTM=0.209 tol=3.6
2024-07-13 18:45:48,912 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=66.8 pTM=0.547 ipTM=0.209 tol=3.34
2024-07-13 18:48:10,121 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=66.9 pTM=0.545 ipTM=0.209 tol=4.57
2024-07-13 18:48:10,123 alphafold2_multimer_v3_model_2_seed_000 took 4378.6s (30 recycles)
2024-07-13 18:50:33,799 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=66.2 pTM=0.507 ipTM=0.195
2024-07-13 18:52:55,107 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.4 pTM=0.525 ipTM=0.194 tol=9.78
2024-07-13 18:55:16,407 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66.6 pTM=0.533 ipTM=0.2 tol=7.43
2024-07-13 18:57:37,729 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=67.1 pTM=0.542 ipTM=0.203 tol=5.82
2024-07-13 18:59:59,031 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66.9 pTM=0.541 ipTM=0.201 tol=3.62
2024-07-13 19:02:20,330 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=66.9 pTM=0.544 ipTM=0.202 tol=3.3
2024-07-13 19:04:41,582 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=67 pTM=0.546 ipTM=0.199 tol=3.46
2024-07-13 19:07:02,923 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=67.1 pTM=0.546 ipTM=0.203 tol=3.39
2024-07-13 19:09:24,260 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=67.1 pTM=0.549 ipTM=0.204 tol=3.19
2024-07-13 19:11:45,602 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=67.1 pTM=0.55 ipTM=0.205 tol=3.48
2024-07-13 19:14:07,001 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=67 pTM=0.547 ipTM=0.205 tol=3.06
2024-07-13 19:16:28,422 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=67.2 pTM=0.551 ipTM=0.203 tol=2.91
2024-07-13 19:18:49,832 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=67.1 pTM=0.552 ipTM=0.204 tol=2.4
2024-07-13 19:21:11,275 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=67.1 pTM=0.549 ipTM=0.203 tol=2.25
2024-07-13 19:23:32,724 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=67 pTM=0.55 ipTM=0.201 tol=2.37
2024-07-13 19:25:54,124 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67.1 pTM=0.553 ipTM=0.204 tol=2.19
2024-07-13 19:28:15,539 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=67.1 pTM=0.55 ipTM=0.199 tol=1.96
2024-07-13 19:30:36,983 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=67.2 pTM=0.553 ipTM=0.201 tol=1.98
2024-07-13 19:32:58,445 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=67.1 pTM=0.552 ipTM=0.202 tol=1.88
2024-07-13 19:35:19,869 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67 pTM=0.551 ipTM=0.203 tol=1.58
2024-07-13 19:37:41,303 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=67.1 pTM=0.555 ipTM=0.199 tol=2.42
2024-07-13 19:40:02,678 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.1 pTM=0.553 ipTM=0.203 tol=1.88
2024-07-13 19:42:24,040 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67.1 pTM=0.553 ipTM=0.199 tol=1.57
2024-07-13 19:44:45,368 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.1 pTM=0.553 ipTM=0.201 tol=1.82
2024-07-13 19:47:06,690 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.1 pTM=0.553 ipTM=0.201 tol=1.95
2024-07-13 19:49:28,076 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.2 pTM=0.553 ipTM=0.201 tol=2
2024-07-13 19:51:49,461 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67.3 pTM=0.556 ipTM=0.199 tol=2.12
2024-07-13 19:54:10,834 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.3 pTM=0.555 ipTM=0.202 tol=1.72
2024-07-13 19:56:32,243 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.2 pTM=0.555 ipTM=0.202 tol=1.49
2024-07-13 19:58:53,644 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.2 pTM=0.555 ipTM=0.2 tol=1.63
2024-07-13 20:01:15,078 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.2 pTM=0.553 ipTM=0.199 tol=1.7
2024-07-13 20:01:15,080 alphafold2_multimer_v3_model_3_seed_000 took 4382.8s (30 recycles)
2024-07-13 20:03:38,676 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=64.3 pTM=0.518 ipTM=0.276
2024-07-13 20:06:00,002 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=63.8 pTM=0.521 ipTM=0.263 tol=16.3
2024-07-13 20:08:21,442 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=64.1 pTM=0.508 ipTM=0.229 tol=8.37
2024-07-13 20:10:42,914 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64.3 pTM=0.507 ipTM=0.205 tol=10.6
2024-07-13 20:13:04,360 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64 pTM=0.512 ipTM=0.236 tol=8.23
2024-07-13 20:15:25,827 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=64.1 pTM=0.509 ipTM=0.199 tol=9.45
2024-07-13 20:17:47,212 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=64.1 pTM=0.513 ipTM=0.224 tol=8.52
2024-07-13 20:20:08,565 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.2 pTM=0.506 ipTM=0.215 tol=8.05
2024-07-13 20:22:29,936 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64 pTM=0.512 ipTM=0.229 tol=7.89
2024-07-13 20:24:51,354 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=64.4 pTM=0.51 ipTM=0.218 tol=5.35
2024-07-13 20:27:12,761 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=64 pTM=0.511 ipTM=0.235 tol=6.16
2024-07-13 20:29:34,197 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=64.3 pTM=0.511 ipTM=0.213 tol=8.01
2024-07-13 20:31:55,626 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=64 pTM=0.514 ipTM=0.237 tol=9.07
2024-07-13 20:34:17,028 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64.2 pTM=0.511 ipTM=0.216 tol=9.88
2024-07-13 20:36:38,440 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64 pTM=0.514 ipTM=0.234 tol=8.27
2024-07-13 20:38:59,824 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64 pTM=0.509 ipTM=0.211 tol=8.3
2024-07-13 20:41:21,168 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=64.1 pTM=0.511 ipTM=0.228 tol=5.14
2024-07-13 20:43:42,625 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=64.6 pTM=0.514 ipTM=0.193 tol=14.2
2024-07-13 20:46:04,112 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=64.3 pTM=0.512 ipTM=0.216 tol=15.7
2024-07-13 20:48:25,544 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.2 pTM=0.506 ipTM=0.203 tol=6.93
2024-07-13 20:50:46,971 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.4 pTM=0.52 ipTM=0.234 tol=10.1
2024-07-13 20:53:08,448 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=64.5 pTM=0.512 ipTM=0.202 tol=9.67
2024-07-13 20:55:29,896 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=64.1 pTM=0.514 ipTM=0.227 tol=6.41
2024-07-13 20:57:51,376 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=64.5 pTM=0.51 ipTM=0.195 tol=9.31
2024-07-13 21:00:12,793 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=64 pTM=0.514 ipTM=0.225 tol=11
2024-07-13 21:02:34,267 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64.4 pTM=0.511 ipTM=0.196 tol=10.9
2024-07-13 21:04:55,748 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64.4 pTM=0.519 ipTM=0.227 tol=9.81
2024-07-13 21:07:17,187 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64.2 pTM=0.512 ipTM=0.213 tol=6.87
2024-07-13 21:09:38,589 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=64.1 pTM=0.517 ipTM=0.229 tol=7.96
2024-07-13 21:11:59,995 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=64.4 pTM=0.519 ipTM=0.216 tol=7.59
2024-07-13 21:14:21,420 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=64.1 pTM=0.518 ipTM=0.231 tol=8.99
2024-07-13 21:14:21,422 alphafold2_multimer_v3_model_4_seed_000 took 4384.2s (30 recycles)
2024-07-13 21:16:45,060 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=65.8 pTM=0.514 ipTM=0.189
2024-07-13 21:19:06,602 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.4 pTM=0.52 ipTM=0.192 tol=15.4
2024-07-13 21:21:28,087 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=66.1 pTM=0.523 ipTM=0.187 tol=15.5
2024-07-13 21:23:49,594 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=67.1 pTM=0.538 ipTM=0.186 tol=9.85
2024-07-13 21:26:11,044 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67.2 pTM=0.544 ipTM=0.19 tol=5.88
2024-07-13 21:28:32,501 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=67.2 pTM=0.551 ipTM=0.192 tol=5.8
2024-07-13 21:30:53,958 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=67.4 pTM=0.559 ipTM=0.193 tol=5.57
2024-07-13 21:33:15,356 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=67.3 pTM=0.557 ipTM=0.192 tol=6.28
2024-07-13 21:35:36,792 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=67.2 pTM=0.561 ipTM=0.193 tol=4.04
2024-07-13 21:37:58,208 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67.3 pTM=0.564 ipTM=0.191 tol=3.32
2024-07-13 21:40:19,588 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67.1 pTM=0.562 ipTM=0.191 tol=2.91
2024-07-13 21:42:41,008 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.5 pTM=0.568 ipTM=0.191 tol=2.77
2024-07-13 21:45:02,413 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.4 pTM=0.569 ipTM=0.192 tol=2.71
2024-07-13 21:47:23,852 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=67.4 pTM=0.566 ipTM=0.192 tol=6.36
2024-07-13 21:49:45,265 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=67.4 pTM=0.566 ipTM=0.192 tol=6.19
2024-07-13 21:52:06,704 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.5 pTM=0.57 ipTM=0.192 tol=3.08
2024-07-13 21:54:28,046 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.2 pTM=0.566 ipTM=0.192 tol=2.75
2024-07-13 21:56:49,399 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=67.4 pTM=0.57 ipTM=0.193 tol=1.78
2024-07-13 21:59:10,744 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=67.3 pTM=0.571 ipTM=0.193 tol=2.42
2024-07-13 22:01:32,057 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=67.2 pTM=0.567 ipTM=0.193 tol=2.89
2024-07-13 22:03:53,420 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=67.6 pTM=0.577 ipTM=0.195 tol=2.29
2024-07-13 22:06:14,827 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=67.6 pTM=0.573 ipTM=0.195 tol=2.29
2024-07-13 22:08:36,198 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=67.6 pTM=0.57 ipTM=0.193 tol=5.57
2024-07-13 22:10:57,576 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=67.6 pTM=0.573 ipTM=0.195 tol=2.91
2024-07-13 22:13:18,933 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=67.6 pTM=0.574 ipTM=0.194 tol=5.24
2024-07-13 22:15:40,297 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=67.6 pTM=0.573 ipTM=0.195 tol=2.57
2024-07-13 22:18:01,691 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=67.9 pTM=0.58 ipTM=0.195 tol=1.96
2024-07-13 22:20:23,089 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=67.9 pTM=0.577 ipTM=0.196 tol=2
2024-07-13 22:22:44,483 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=67.7 pTM=0.575 ipTM=0.196 tol=5.52
2024-07-13 22:25:05,876 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=67.9 pTM=0.582 ipTM=0.195 tol=4.83
2024-07-13 22:27:27,233 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67.9 pTM=0.583 ipTM=0.197 tol=5.03
2024-07-13 22:27:27,235 alphafold2_multimer_v3_model_5_seed_000 took 4383.7s (30 recycles)
2024-07-13 22:27:29,363 reranking models by 'multimer' metric
2024-07-13 22:27:39,614 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-13 22:34:29,380 Relaxation took 420.0s
2024-07-13 22:34:29,380 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=64.1 pTM=0.518 ipTM=0.231
2024-07-13 22:37:35,701 Relaxation took 186.3s
2024-07-13 22:37:35,701 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=66.9 pTM=0.545 ipTM=0.209
2024-07-13 22:40:42,726 Relaxation took 187.0s
2024-07-13 22:40:42,726 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=66.6 pTM=0.514 ipTM=0.217
2024-07-13 22:43:53,104 Relaxation took 190.4s
2024-07-13 22:43:53,104 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67.9 pTM=0.583 ipTM=0.197
2024-07-13 22:48:18,960 Relaxation took 265.9s
2024-07-13 22:48:18,961 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.2 pTM=0.553 ipTM=0.199
2024-07-13 22:48:30,727 Done