2024-07-13 16:19:27,769 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 16:19:28,091 Running on GPU
2024-07-13 16:19:37,413 Found 6 citations for tools or databases
2024-07-13 16:19:37,413 Query 1/1: TOP2B_FA7 (length 2092)
2024-07-13 16:19:37,860 Sleeping for 10s. Reason: PENDING
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2024-07-13 16:25:20,100 Sleeping for 10s. Reason: PENDING
2024-07-13 16:25:30,511 Sleeping for 7s. Reason: RUNNING
2024-07-13 16:25:37,935 Sleeping for 8s. Reason: RUNNING
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2024-07-13 16:27:00,621 Sleeping for 7s. Reason: RUNNING
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2024-07-13 16:28:06,019 Sleeping for 10s. Reason: RUNNING
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2024-07-13 16:28:25,896 Sleeping for 5s. Reason: RUNNING
2024-07-13 16:28:31,307 Sleeping for 5s. Reason: RUNNING
2024-07-13 16:28:36,744 Sleeping for 7s. Reason: RUNNING
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2024-07-13 16:29:10,445 Setting max_seq=508, max_extra_seq=2048
2024-07-13 16:35:27,689 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=65.9 pTM=0.463 ipTM=0.2
2024-07-13 16:38:25,010 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66.8 pTM=0.484 ipTM=0.225 tol=15.9
2024-07-13 16:41:22,389 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66.6 pTM=0.48 ipTM=0.24 tol=9.17
2024-07-13 16:44:19,679 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=66.9 pTM=0.482 ipTM=0.298 tol=7.46
2024-07-13 16:47:16,955 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=67.1 pTM=0.484 ipTM=0.292 tol=6.41
2024-07-13 16:50:14,201 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=67.1 pTM=0.482 ipTM=0.272 tol=4.9
2024-07-13 16:53:11,428 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=66.9 pTM=0.481 ipTM=0.255 tol=3.18
2024-07-13 16:56:08,510 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=67.4 pTM=0.498 ipTM=0.327 tol=5.63
2024-07-13 16:59:05,578 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=67.9 pTM=0.494 ipTM=0.315 tol=5.62
2024-07-13 17:02:02,798 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=67.4 pTM=0.485 ipTM=0.315 tol=4.05
2024-07-13 17:05:00,010 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=67.1 pTM=0.484 ipTM=0.291 tol=3.79
2024-07-13 17:07:57,227 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=67.1 pTM=0.483 ipTM=0.289 tol=5.09
2024-07-13 17:10:54,445 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.1 pTM=0.483 ipTM=0.287 tol=3.04
2024-07-13 17:13:51,567 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67.4 pTM=0.49 ipTM=0.302 tol=4.25
2024-07-13 17:16:48,729 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=67.6 pTM=0.486 ipTM=0.323 tol=2.95
2024-07-13 17:19:45,849 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=67.2 pTM=0.485 ipTM=0.31 tol=4.39
2024-07-13 17:22:42,907 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=67.3 pTM=0.49 ipTM=0.334 tol=4.13
2024-07-13 17:25:39,970 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=67.2 pTM=0.488 ipTM=0.326 tol=3.37
2024-07-13 17:28:37,082 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=67.1 pTM=0.484 ipTM=0.319 tol=2.85
2024-07-13 17:31:34,289 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=66.9 pTM=0.483 ipTM=0.302 tol=3.23
2024-07-13 17:34:31,445 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=67.2 pTM=0.485 ipTM=0.289 tol=2.72
2024-07-13 17:37:28,533 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=67.1 pTM=0.483 ipTM=0.311 tol=2.7
2024-07-13 17:40:25,661 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=67.1 pTM=0.484 ipTM=0.314 tol=3.72
2024-07-13 17:43:22,802 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=67.3 pTM=0.483 ipTM=0.333 tol=4.77
2024-07-13 17:46:19,953 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=67.2 pTM=0.484 ipTM=0.304 tol=4.5
2024-07-13 17:49:17,139 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=67.2 pTM=0.482 ipTM=0.288 tol=3.34
2024-07-13 17:52:14,470 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=67.3 pTM=0.483 ipTM=0.29 tol=4.17
2024-07-13 17:55:11,700 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=67.2 pTM=0.484 ipTM=0.28 tol=3.31
2024-07-13 17:58:08,904 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=67.1 pTM=0.482 ipTM=0.262 tol=4.26
2024-07-13 18:01:06,063 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=67 pTM=0.483 ipTM=0.269 tol=4.28
2024-07-13 18:04:03,232 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=67.1 pTM=0.483 ipTM=0.295 tol=3.31
2024-07-13 18:04:03,234 alphafold2_multimer_v3_model_1_seed_000 took 5635.1s (30 recycles)
2024-07-13 18:07:03,267 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=67.3 pTM=0.513 ipTM=0.29
2024-07-13 18:10:00,872 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=67.8 pTM=0.501 ipTM=0.224 tol=12.2
2024-07-13 18:12:58,453 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=67 pTM=0.497 ipTM=0.201 tol=16.3
2024-07-13 18:15:55,995 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=67.6 pTM=0.499 ipTM=0.201 tol=9.95
2024-07-13 18:18:53,509 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67.4 pTM=0.503 ipTM=0.202 tol=7.19
2024-07-13 18:21:51,039 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67.6 pTM=0.5 ipTM=0.2 tol=7.37
2024-07-13 18:24:48,634 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=67.3 pTM=0.498 ipTM=0.198 tol=6.04
2024-07-13 18:27:46,180 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=67.2 pTM=0.498 ipTM=0.197 tol=4.29
2024-07-13 18:30:43,765 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=67.6 pTM=0.498 ipTM=0.198 tol=5.16
2024-07-13 18:33:41,358 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=67.5 pTM=0.497 ipTM=0.226 tol=5.27
2024-07-13 18:36:38,886 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=67.7 pTM=0.494 ipTM=0.306 tol=5.11
2024-07-13 18:39:36,432 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=67.2 pTM=0.488 ipTM=0.328 tol=5.33
2024-07-13 18:42:33,931 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=66.4 pTM=0.482 ipTM=0.316 tol=10.2
2024-07-13 18:45:31,417 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=67.4 pTM=0.487 ipTM=0.256 tol=9.18
2024-07-13 18:48:28,741 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=67.9 pTM=0.492 ipTM=0.306 tol=7.86
2024-07-13 18:51:25,983 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=67.8 pTM=0.495 ipTM=0.321 tol=5.72
2024-07-13 18:54:23,214 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=67.9 pTM=0.493 ipTM=0.328 tol=4.43
2024-07-13 18:57:20,433 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=67.9 pTM=0.496 ipTM=0.33 tol=4.23
2024-07-13 19:00:17,669 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=67.9 pTM=0.494 ipTM=0.357 tol=3.86
2024-07-13 19:03:14,960 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=68 pTM=0.496 ipTM=0.316 tol=3.08
2024-07-13 19:06:12,254 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=68 pTM=0.497 ipTM=0.316 tol=3.09
2024-07-13 19:09:09,600 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=68.1 pTM=0.495 ipTM=0.331 tol=2.86
2024-07-13 19:12:06,949 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=68 pTM=0.497 ipTM=0.32 tol=2.95
2024-07-13 19:15:04,268 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=68.1 pTM=0.496 ipTM=0.327 tol=2.85
2024-07-13 19:18:01,545 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=67.9 pTM=0.497 ipTM=0.326 tol=2.91
2024-07-13 19:20:58,862 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=67.9 pTM=0.494 ipTM=0.325 tol=3.87
2024-07-13 19:23:56,218 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=68 pTM=0.494 ipTM=0.322 tol=2.36
2024-07-13 19:26:53,593 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=68.1 pTM=0.495 ipTM=0.308 tol=2.83
2024-07-13 19:29:50,943 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=67.8 pTM=0.493 ipTM=0.285 tol=3.97
2024-07-13 19:32:48,306 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=67.8 pTM=0.493 ipTM=0.297 tol=2.97
2024-07-13 19:35:45,712 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=67.7 pTM=0.495 ipTM=0.323 tol=3.46
2024-07-13 19:35:45,715 alphafold2_multimer_v3_model_2_seed_000 took 5499.9s (30 recycles)
2024-07-13 19:38:45,979 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=66.6 pTM=0.49 ipTM=0.222
2024-07-13 19:41:43,645 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=67.5 pTM=0.5 ipTM=0.202 tol=13.2
2024-07-13 19:44:41,070 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=67.6 pTM=0.503 ipTM=0.223 tol=11.8
2024-07-13 19:47:38,413 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=67.6 pTM=0.505 ipTM=0.241 tol=5.64
2024-07-13 19:50:35,819 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=67.5 pTM=0.507 ipTM=0.232 tol=4.51
2024-07-13 19:53:33,261 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=67.3 pTM=0.51 ipTM=0.236 tol=4.44
2024-07-13 19:56:30,647 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=67.4 pTM=0.508 ipTM=0.241 tol=4.86
2024-07-13 19:59:27,981 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=67.6 pTM=0.507 ipTM=0.239 tol=4.38
2024-07-13 20:02:25,401 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=67.2 pTM=0.509 ipTM=0.236 tol=2.85
2024-07-13 20:05:22,766 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=67.4 pTM=0.508 ipTM=0.236 tol=3.72
2024-07-13 20:08:20,183 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=67.2 pTM=0.506 ipTM=0.233 tol=5.05
2024-07-13 20:11:17,638 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=67.4 pTM=0.508 ipTM=0.235 tol=4.67
2024-07-13 20:14:14,973 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=67.2 pTM=0.509 ipTM=0.239 tol=4.88
2024-07-13 20:17:12,247 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=67.5 pTM=0.511 ipTM=0.245 tol=3.94
2024-07-13 20:20:09,578 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=67.2 pTM=0.51 ipTM=0.238 tol=4.24
2024-07-13 20:23:06,889 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67.4 pTM=0.509 ipTM=0.243 tol=4.87
2024-07-13 20:26:04,199 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=67.3 pTM=0.507 ipTM=0.235 tol=4.46
2024-07-13 20:29:01,572 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=67.2 pTM=0.507 ipTM=0.234 tol=3.61
2024-07-13 20:31:58,987 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=67.1 pTM=0.507 ipTM=0.236 tol=2.21
2024-07-13 20:34:56,395 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67 pTM=0.507 ipTM=0.235 tol=4.31
2024-07-13 20:37:53,779 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=67.1 pTM=0.507 ipTM=0.233 tol=3.58
2024-07-13 20:40:51,258 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.2 pTM=0.51 ipTM=0.237 tol=3.32
2024-07-13 20:43:48,633 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67.3 pTM=0.509 ipTM=0.238 tol=4.02
2024-07-13 20:46:46,007 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.3 pTM=0.508 ipTM=0.237 tol=5.02
2024-07-13 20:49:43,370 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.3 pTM=0.507 ipTM=0.234 tol=4.64
2024-07-13 20:52:40,715 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.1 pTM=0.508 ipTM=0.24 tol=3.35
2024-07-13 20:55:38,045 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67.4 pTM=0.506 ipTM=0.235 tol=4.07
2024-07-13 20:58:35,406 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.1 pTM=0.506 ipTM=0.234 tol=4.99
2024-07-13 21:01:32,753 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.1 pTM=0.509 ipTM=0.239 tol=3.54
2024-07-13 21:04:30,068 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.3 pTM=0.508 ipTM=0.239 tol=4.85
2024-07-13 21:07:27,485 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=66.9 pTM=0.505 ipTM=0.235 tol=5.54
2024-07-13 21:07:27,487 alphafold2_multimer_v3_model_3_seed_000 took 5499.2s (30 recycles)
2024-07-13 21:10:27,682 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=64 pTM=0.489 ipTM=0.227
2024-07-13 21:13:25,231 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=64.8 pTM=0.487 ipTM=0.23 tol=15
2024-07-13 21:16:22,722 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.2 pTM=0.488 ipTM=0.229 tol=10
2024-07-13 21:19:20,217 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=65.1 pTM=0.492 ipTM=0.232 tol=8.77
2024-07-13 21:22:17,655 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=65.6 pTM=0.487 ipTM=0.223 tol=8.73
2024-07-13 21:25:15,094 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=65.4 pTM=0.495 ipTM=0.228 tol=10.9
2024-07-13 21:28:12,538 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=65.4 pTM=0.493 ipTM=0.232 tol=9.12
2024-07-13 21:31:09,982 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=65.6 pTM=0.489 ipTM=0.23 tol=7.11
2024-07-13 21:34:07,444 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=65.7 pTM=0.49 ipTM=0.224 tol=6.04
2024-07-13 21:37:04,847 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=65.1 pTM=0.495 ipTM=0.229 tol=7.23
2024-07-13 21:40:02,171 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=65.9 pTM=0.486 ipTM=0.278 tol=12.8
2024-07-13 21:42:59,464 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=65.4 pTM=0.485 ipTM=0.225 tol=5.6
2024-07-13 21:45:56,871 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=65.1 pTM=0.493 ipTM=0.23 tol=7.65
2024-07-13 21:48:54,276 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=65.6 pTM=0.485 ipTM=0.257 tol=7.47
2024-07-13 21:51:51,728 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=65.6 pTM=0.495 ipTM=0.229 tol=6.59
2024-07-13 21:54:49,148 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=65.2 pTM=0.495 ipTM=0.231 tol=4.71
2024-07-13 21:57:46,448 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=65.5 pTM=0.485 ipTM=0.272 tol=8.02
2024-07-13 22:00:43,822 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=65.2 pTM=0.492 ipTM=0.227 tol=7.2
2024-07-13 22:03:41,180 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=65.2 pTM=0.49 ipTM=0.229 tol=5.91
2024-07-13 22:06:38,450 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=65.5 pTM=0.488 ipTM=0.267 tol=11.1
2024-07-13 22:09:35,768 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=65.6 pTM=0.489 ipTM=0.227 tol=11.1
2024-07-13 22:12:33,134 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=65.1 pTM=0.492 ipTM=0.227 tol=8.74
2024-07-13 22:15:30,456 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=65.4 pTM=0.484 ipTM=0.248 tol=9.24
2024-07-13 22:18:27,811 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=65.4 pTM=0.488 ipTM=0.224 tol=4.97
2024-07-13 22:21:25,218 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=65.2 pTM=0.492 ipTM=0.228 tol=8.04
2024-07-13 22:24:22,533 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=65.4 pTM=0.484 ipTM=0.252 tol=8.77
2024-07-13 22:27:19,985 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=65.2 pTM=0.492 ipTM=0.226 tol=9.55
2024-07-13 22:30:17,427 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=65.1 pTM=0.493 ipTM=0.233 tol=6.23
2024-07-13 22:33:14,711 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=65.4 pTM=0.486 ipTM=0.302 tol=11.5
2024-07-13 22:36:12,030 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=65.5 pTM=0.489 ipTM=0.229 tol=9.16
2024-07-13 22:39:09,459 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=64.8 pTM=0.489 ipTM=0.226 tol=8.34
2024-07-13 22:39:09,462 alphafold2_multimer_v3_model_4_seed_000 took 5499.4s (30 recycles)
2024-07-13 22:42:09,629 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=64.7 pTM=0.483 ipTM=0.223
2024-07-13 22:45:07,095 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.8 pTM=0.49 ipTM=0.25 tol=12.6
2024-07-13 22:48:04,458 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=66.9 pTM=0.488 ipTM=0.232 tol=7.66
2024-07-13 22:51:01,858 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=66.8 pTM=0.489 ipTM=0.213 tol=7.72
2024-07-13 22:53:59,308 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=66.8 pTM=0.495 ipTM=0.215 tol=5.48
2024-07-13 22:56:56,730 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=66.9 pTM=0.501 ipTM=0.213 tol=6.87
2024-07-13 22:59:54,135 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=67.1 pTM=0.502 ipTM=0.211 tol=6.09
2024-07-13 23:02:51,561 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=66.9 pTM=0.504 ipTM=0.21 tol=5.59
2024-07-13 23:05:48,955 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=66.9 pTM=0.506 ipTM=0.213 tol=7.12
2024-07-13 23:08:46,314 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=66.9 pTM=0.508 ipTM=0.214 tol=3.98
2024-07-13 23:11:43,602 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=66.9 pTM=0.506 ipTM=0.224 tol=4.1
2024-07-13 23:14:40,828 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67 pTM=0.506 ipTM=0.221 tol=4.51
2024-07-13 23:17:38,067 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=66.9 pTM=0.509 ipTM=0.231 tol=3.41
2024-07-13 23:20:35,274 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=67.2 pTM=0.514 ipTM=0.244 tol=2.71
2024-07-13 23:23:32,518 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=67.2 pTM=0.512 ipTM=0.228 tol=3.14
2024-07-13 23:26:29,761 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.1 pTM=0.513 ipTM=0.227 tol=3.49
2024-07-13 23:29:27,011 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.2 pTM=0.514 ipTM=0.228 tol=3.51
2024-07-13 23:32:24,222 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=67.3 pTM=0.517 ipTM=0.241 tol=3.33
2024-07-13 23:35:21,479 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=67.1 pTM=0.513 ipTM=0.227 tol=2.86
2024-07-13 23:38:18,733 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=67.2 pTM=0.517 ipTM=0.221 tol=6.58
2024-07-13 23:41:16,041 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=67.4 pTM=0.52 ipTM=0.219 tol=6.27
2024-07-13 23:44:13,324 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=67.2 pTM=0.52 ipTM=0.229 tol=3.07
2024-07-13 23:47:10,519 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=67.4 pTM=0.52 ipTM=0.237 tol=3.6
2024-07-13 23:50:07,761 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=67.2 pTM=0.519 ipTM=0.225 tol=7.01
2024-07-13 23:53:05,009 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=67.4 pTM=0.52 ipTM=0.225 tol=5.56
2024-07-13 23:56:02,284 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=67.2 pTM=0.519 ipTM=0.23 tol=3.85
2024-07-13 23:58:59,515 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=67.6 pTM=0.517 ipTM=0.231 tol=2.33
2024-07-14 00:01:56,752 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=67.1 pTM=0.517 ipTM=0.228 tol=7.36
2024-07-14 00:04:53,997 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=67.2 pTM=0.517 ipTM=0.233 tol=4.08
2024-07-14 00:07:51,193 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=67.6 pTM=0.521 ipTM=0.246 tol=6.95
2024-07-14 00:10:48,501 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67 pTM=0.512 ipTM=0.224 tol=3.89
2024-07-14 00:10:48,503 alphafold2_multimer_v3_model_5_seed_000 took 5496.3s (30 recycles)
2024-07-14 00:10:51,102 reranking models by 'multimer' metric
2024-07-14 00:11:12,467 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-14 00:19:13,074 Relaxation took 502.0s
2024-07-14 00:19:13,074 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=67.7 pTM=0.495 ipTM=0.323
2024-07-14 00:26:23,537 Relaxation took 430.5s
2024-07-14 00:26:23,537 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=67.1 pTM=0.483 ipTM=0.295
2024-07-14 00:33:36,553 Relaxation took 433.0s
2024-07-14 00:33:42,060 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=66.9 pTM=0.505 ipTM=0.235
2024-07-14 00:39:33,794 Relaxation took 346.0s
2024-07-14 00:39:33,794 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67 pTM=0.512 ipTM=0.224
2024-07-14 01:47:24,922 Relaxation took 4071.1s
2024-07-14 01:47:24,923 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=64.8 pTM=0.489 ipTM=0.226
2024-07-14 01:47:37,698 Done