2024-07-13 16:48:52,066 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 16:48:52,397 Running on GPU
2024-07-13 16:49:04,024 Found 6 citations for tools or databases
2024-07-13 16:49:04,024 Query 1/1: TPC1_ITA7 (length 1997)
2024-07-13 16:49:04,483 Sleeping for 8s. Reason: PENDING
2024-07-13 16:49:12,909 Sleeping for 7s. Reason: RUNNING
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2024-07-13 16:50:30,794 Sleeping for 9s. Reason: RUNNING
2024-07-13 16:50:40,217 Sleeping for 5s. Reason: RUNNING
2024-07-13 16:50:45,672 Sleeping for 6s. Reason: RUNNING
2024-07-13 16:50:52,100 Sleeping for 5s. Reason: RUNNING
2024-07-13 16:50:57,550 Sleeping for 10s. Reason: RUNNING
2024-07-13 16:51:07,979 Sleeping for 5s. Reason: RUNNING
2024-07-13 16:51:13,395 Sleeping for 7s. Reason: RUNNING
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2024-07-13 16:51:40,662 Sleeping for 10s. Reason: RUNNING
2024-07-13 16:51:51,093 Sleeping for 5s. Reason: RUNNING
2024-07-13 16:51:56,506 Sleeping for 10s. Reason: RUNNING
2024-07-13 16:52:06,922 Sleeping for 5s. Reason: RUNNING
2024-07-13 16:52:12,326 Sleeping for 5s. Reason: RUNNING
2024-07-13 16:52:17,741 Sleeping for 5s. Reason: RUNNING
2024-07-13 16:52:23,149 Sleeping for 6s. Reason: RUNNING
2024-07-13 16:52:29,581 Sleeping for 8s. Reason: RUNNING
2024-07-13 16:52:38,029 Sleeping for 9s. Reason: RUNNING
2024-07-13 16:52:50,035 Sleeping for 8s. Reason: PENDING
2024-07-13 16:52:58,450 Sleeping for 10s. Reason: RUNNING
2024-07-13 16:53:08,871 Sleeping for 8s. Reason: RUNNING
2024-07-13 16:53:17,318 Sleeping for 8s. Reason: RUNNING
2024-07-13 16:53:25,756 Sleeping for 8s. Reason: RUNNING
2024-07-13 16:53:34,171 Sleeping for 10s. Reason: RUNNING
2024-07-13 16:53:44,600 Sleeping for 8s. Reason: RUNNING
2024-07-13 16:53:53,023 Sleeping for 5s. Reason: RUNNING
2024-07-13 16:53:58,468 Sleeping for 5s. Reason: RUNNING
2024-07-13 16:54:03,893 Sleeping for 7s. Reason: RUNNING
2024-07-13 16:54:11,318 Sleeping for 5s. Reason: RUNNING
2024-07-13 16:54:16,733 Sleeping for 10s. Reason: RUNNING
2024-07-13 16:54:27,165 Sleeping for 8s. Reason: RUNNING
2024-07-13 16:54:35,581 Sleeping for 5s. Reason: RUNNING
2024-07-13 16:54:41,000 Sleeping for 10s. Reason: RUNNING
2024-07-13 16:54:51,444 Sleeping for 5s. Reason: RUNNING
2024-07-13 16:54:56,867 Sleeping for 8s. Reason: RUNNING
2024-07-13 16:55:10,740 Setting max_seq=508, max_extra_seq=2048
2024-07-13 17:01:43,795 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=72.2 pTM=0.435 ipTM=0.205
2024-07-13 17:04:23,415 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=72.1 pTM=0.443 ipTM=0.212 tol=10.9
2024-07-13 17:07:03,116 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=72.2 pTM=0.448 ipTM=0.278 tol=4.26
2024-07-13 17:09:42,828 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=72 pTM=0.446 ipTM=0.218 tol=4.05
2024-07-13 17:12:22,501 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=72.5 pTM=0.444 ipTM=0.214 tol=2.66
2024-07-13 17:15:02,075 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=72.6 pTM=0.452 ipTM=0.222 tol=3.99
2024-07-13 17:17:41,777 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=72.6 pTM=0.45 ipTM=0.223 tol=3.04
2024-07-13 17:20:21,426 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=73 pTM=0.458 ipTM=0.232 tol=6.38
2024-07-13 17:23:01,071 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=73.2 pTM=0.459 ipTM=0.23 tol=4.18
2024-07-13 17:25:40,696 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=73.2 pTM=0.46 ipTM=0.231 tol=3.3
2024-07-13 17:28:20,385 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=73.4 pTM=0.458 ipTM=0.225 tol=2.16
2024-07-13 17:31:00,033 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=73.5 pTM=0.463 ipTM=0.233 tol=1.31
2024-07-13 17:33:39,667 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=73.6 pTM=0.462 ipTM=0.228 tol=1.33
2024-07-13 17:36:19,329 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=73.6 pTM=0.453 ipTM=0.218 tol=1.78
2024-07-13 17:38:58,996 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=73.5 pTM=0.458 ipTM=0.223 tol=1.39
2024-07-13 17:41:38,634 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=73.6 pTM=0.461 ipTM=0.228 tol=2.3
2024-07-13 17:44:18,269 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=73.8 pTM=0.464 ipTM=0.23 tol=1.22
2024-07-13 17:46:57,916 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=73.8 pTM=0.464 ipTM=0.23 tol=2.48
2024-07-13 17:49:37,508 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=73.6 pTM=0.462 ipTM=0.229 tol=1.33
2024-07-13 17:52:17,116 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=73.5 pTM=0.463 ipTM=0.23 tol=1.36
2024-07-13 17:54:56,691 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=73.6 pTM=0.459 ipTM=0.224 tol=2.04
2024-07-13 17:57:36,206 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=73.6 pTM=0.461 ipTM=0.229 tol=1.85
2024-07-13 18:00:15,792 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=73.4 pTM=0.463 ipTM=0.23 tol=1.58
2024-07-13 18:02:55,452 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=73.6 pTM=0.461 ipTM=0.226 tol=2.63
2024-07-13 18:05:35,043 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=73.6 pTM=0.459 ipTM=0.223 tol=0.898
2024-07-13 18:08:14,596 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=73.4 pTM=0.46 ipTM=0.228 tol=2.56
2024-07-13 18:10:54,201 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=73.7 pTM=0.464 ipTM=0.231 tol=2.71
2024-07-13 18:13:33,752 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=73.6 pTM=0.467 ipTM=0.236 tol=2.03
2024-07-13 18:16:13,282 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=73.5 pTM=0.461 ipTM=0.228 tol=2.02
2024-07-13 18:18:52,878 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=73.4 pTM=0.461 ipTM=0.228 tol=1.89
2024-07-13 18:21:32,424 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=73.6 pTM=0.461 ipTM=0.228 tol=1.19
2024-07-13 18:21:32,427 alphafold2_multimer_v3_model_1_seed_000 took 5124.5s (30 recycles)
2024-07-13 18:24:14,748 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=72.1 pTM=0.442 ipTM=0.212
2024-07-13 18:26:54,705 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=72.3 pTM=0.436 ipTM=0.204 tol=7.08
2024-07-13 18:29:34,658 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=72.9 pTM=0.432 ipTM=0.2 tol=3.7
2024-07-13 18:32:14,676 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=73.1 pTM=0.43 ipTM=0.199 tol=3.31
2024-07-13 18:34:54,617 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=73.2 pTM=0.43 ipTM=0.197 tol=2.73
2024-07-13 18:37:34,581 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=73.2 pTM=0.429 ipTM=0.2 tol=1.84
2024-07-13 18:40:14,489 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=73.3 pTM=0.428 ipTM=0.2 tol=1.45
2024-07-13 18:42:54,389 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=73.3 pTM=0.428 ipTM=0.199 tol=1.78
2024-07-13 18:45:34,343 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=73.2 pTM=0.428 ipTM=0.199 tol=1.47
2024-07-13 18:48:14,267 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=73.2 pTM=0.429 ipTM=0.201 tol=0.783
2024-07-13 18:50:54,267 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=73 pTM=0.428 ipTM=0.201 tol=1.13
2024-07-13 18:53:34,270 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=73.2 pTM=0.429 ipTM=0.201 tol=1.52
2024-07-13 18:56:14,269 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=73.1 pTM=0.429 ipTM=0.202 tol=0.958
2024-07-13 18:58:54,325 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=73.2 pTM=0.429 ipTM=0.202 tol=1.84
2024-07-13 19:01:34,351 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=73.1 pTM=0.429 ipTM=0.201 tol=1.38
2024-07-13 19:04:14,385 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=73.2 pTM=0.429 ipTM=0.2 tol=1.21
2024-07-13 19:06:54,437 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=73.2 pTM=0.427 ipTM=0.199 tol=1.33
2024-07-13 19:09:34,440 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=73.1 pTM=0.428 ipTM=0.201 tol=1.29
2024-07-13 19:12:14,501 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=73.1 pTM=0.427 ipTM=0.201 tol=1.1
2024-07-13 19:14:54,486 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=73.1 pTM=0.427 ipTM=0.202 tol=0.915
2024-07-13 19:17:34,448 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=73.2 pTM=0.427 ipTM=0.201 tol=1.03
2024-07-13 19:20:14,372 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=73.1 pTM=0.428 ipTM=0.203 tol=1.54
2024-07-13 19:22:54,396 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=73 pTM=0.427 ipTM=0.202 tol=1.01
2024-07-13 19:25:34,286 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=73.2 pTM=0.428 ipTM=0.201 tol=1.89
2024-07-13 19:28:14,254 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=73.1 pTM=0.429 ipTM=0.202 tol=1.3
2024-07-13 19:30:54,143 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=73.1 pTM=0.428 ipTM=0.201 tol=1.38
2024-07-13 19:33:34,068 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=73.4 pTM=0.428 ipTM=0.202 tol=1.39
2024-07-13 19:36:14,083 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=73.1 pTM=0.427 ipTM=0.202 tol=2.18
2024-07-13 19:38:54,043 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=73 pTM=0.427 ipTM=0.201 tol=1.45
2024-07-13 19:41:33,979 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=73.1 pTM=0.428 ipTM=0.201 tol=1.33
2024-07-13 19:44:14,001 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=73.1 pTM=0.428 ipTM=0.2 tol=0.883
2024-07-13 19:44:14,004 alphafold2_multimer_v3_model_2_seed_000 took 4959.3s (30 recycles)
2024-07-13 19:46:56,347 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=71.3 pTM=0.435 ipTM=0.198
2024-07-13 19:49:36,388 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=71.9 pTM=0.428 ipTM=0.191 tol=9.63
2024-07-13 19:52:16,437 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=71.8 pTM=0.428 ipTM=0.196 tol=5
2024-07-13 19:54:56,498 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=71.9 pTM=0.428 ipTM=0.195 tol=5.07
2024-07-13 19:57:36,572 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=72.1 pTM=0.427 ipTM=0.194 tol=3.96
2024-07-13 20:00:16,632 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=72.1 pTM=0.427 ipTM=0.194 tol=3.16
2024-07-13 20:02:56,826 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=72 pTM=0.426 ipTM=0.19 tol=7.06
2024-07-13 20:05:36,747 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=71.6 pTM=0.432 ipTM=0.197 tol=19.1
2024-07-13 20:08:16,618 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=71.2 pTM=0.441 ipTM=0.202 tol=10.3
2024-07-13 20:10:56,546 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=71.4 pTM=0.439 ipTM=0.197 tol=7.27
2024-07-13 20:13:36,469 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=71.5 pTM=0.442 ipTM=0.199 tol=5.22
2024-07-13 20:16:16,315 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=71.5 pTM=0.442 ipTM=0.199 tol=2.03
2024-07-13 20:18:56,097 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=71.7 pTM=0.444 ipTM=0.208 tol=2.88
2024-07-13 20:21:35,916 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=72 pTM=0.445 ipTM=0.218 tol=1.02
2024-07-13 20:24:15,773 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=71.9 pTM=0.445 ipTM=0.214 tol=3.12
2024-07-13 20:26:55,623 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=71.9 pTM=0.445 ipTM=0.219 tol=1.95
2024-07-13 20:29:35,488 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=71.9 pTM=0.446 ipTM=0.214 tol=1.47
2024-07-13 20:32:15,357 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=71.9 pTM=0.445 ipTM=0.211 tol=2
2024-07-13 20:34:55,137 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=71.6 pTM=0.446 ipTM=0.214 tol=1.8
2024-07-13 20:37:34,966 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=72 pTM=0.444 ipTM=0.215 tol=1.75
2024-07-13 20:40:14,806 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=72.1 pTM=0.446 ipTM=0.213 tol=1.32
2024-07-13 20:42:54,691 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=71.9 pTM=0.445 ipTM=0.211 tol=1.79
2024-07-13 20:45:34,564 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=71.9 pTM=0.446 ipTM=0.207 tol=1.59
2024-07-13 20:48:14,419 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=72.1 pTM=0.447 ipTM=0.208 tol=1.03
2024-07-13 20:50:54,259 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=71.9 pTM=0.446 ipTM=0.205 tol=2.42
2024-07-13 20:53:34,033 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=71.9 pTM=0.447 ipTM=0.216 tol=1.32
2024-07-13 20:56:13,931 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=71.9 pTM=0.443 ipTM=0.204 tol=1.48
2024-07-13 20:58:53,766 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=71.6 pTM=0.446 ipTM=0.207 tol=2
2024-07-13 21:01:33,682 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=71.9 pTM=0.445 ipTM=0.205 tol=1.96
2024-07-13 21:04:13,471 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=71.7 pTM=0.446 ipTM=0.206 tol=1.04
2024-07-13 21:06:53,231 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=71.8 pTM=0.447 ipTM=0.207 tol=1.39
2024-07-13 21:06:53,234 alphafold2_multimer_v3_model_3_seed_000 took 4956.9s (30 recycles)
2024-07-13 21:09:35,482 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=70.8 pTM=0.429 ipTM=0.205
2024-07-13 21:12:15,580 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=72 pTM=0.429 ipTM=0.204 tol=11.8
2024-07-13 21:14:55,525 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=72.6 pTM=0.442 ipTM=0.274 tol=8.04
2024-07-13 21:17:35,389 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=72.8 pTM=0.447 ipTM=0.274 tol=5.05
2024-07-13 21:20:15,257 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=72.4 pTM=0.442 ipTM=0.22 tol=3.67
2024-07-13 21:22:55,140 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=72.6 pTM=0.446 ipTM=0.219 tol=3.98
2024-07-13 21:25:35,014 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=72.3 pTM=0.445 ipTM=0.207 tol=3.18
2024-07-13 21:28:15,009 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=72.3 pTM=0.445 ipTM=0.206 tol=2.6
2024-07-13 21:30:54,980 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=72.2 pTM=0.447 ipTM=0.206 tol=3.76
2024-07-13 21:33:34,968 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=72 pTM=0.447 ipTM=0.206 tol=2.5
2024-07-13 21:36:14,978 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=72 pTM=0.446 ipTM=0.207 tol=2.45
2024-07-13 21:38:54,959 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=71.9 pTM=0.448 ipTM=0.206 tol=2.31
2024-07-13 21:41:34,898 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=72.2 pTM=0.448 ipTM=0.21 tol=1.43
2024-07-13 21:44:14,759 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=72.2 pTM=0.448 ipTM=0.22 tol=1.06
2024-07-13 21:46:54,689 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=72.2 pTM=0.449 ipTM=0.219 tol=1
2024-07-13 21:49:34,629 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=72.1 pTM=0.448 ipTM=0.211 tol=1.35
2024-07-13 21:52:14,599 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=72.3 pTM=0.448 ipTM=0.206 tol=1.29
2024-07-13 21:54:54,514 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=72.1 pTM=0.447 ipTM=0.208 tol=1.56
2024-07-13 21:57:34,500 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=72 pTM=0.446 ipTM=0.217 tol=1.26
2024-07-13 22:00:14,460 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=71.9 pTM=0.446 ipTM=0.207 tol=2.1
2024-07-13 22:02:54,483 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=72.2 pTM=0.447 ipTM=0.207 tol=1.31
2024-07-13 22:05:34,547 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=71.6 pTM=0.445 ipTM=0.208 tol=2.9
2024-07-13 22:08:14,560 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=72.1 pTM=0.447 ipTM=0.205 tol=2.81
2024-07-13 22:10:54,597 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=71.9 pTM=0.445 ipTM=0.208 tol=3.75
2024-07-13 22:13:34,608 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=71.8 pTM=0.446 ipTM=0.211 tol=3.7
2024-07-13 22:16:14,679 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=71.6 pTM=0.444 ipTM=0.206 tol=2.81
2024-07-13 22:18:54,789 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=71.6 pTM=0.441 ipTM=0.204 tol=3.43
2024-07-13 22:21:34,887 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=71.8 pTM=0.439 ipTM=0.203 tol=6.26
2024-07-13 22:24:14,827 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=71.8 pTM=0.441 ipTM=0.202 tol=3.03
2024-07-13 22:26:54,706 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=71.9 pTM=0.44 ipTM=0.201 tol=2.93
2024-07-13 22:29:34,585 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=71.9 pTM=0.44 ipTM=0.201 tol=3.64
2024-07-13 22:29:34,587 alphafold2_multimer_v3_model_4_seed_000 took 4959.0s (30 recycles)
2024-07-13 22:32:16,775 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=68.2 pTM=0.424 ipTM=0.2
2024-07-13 22:34:56,754 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=69.9 pTM=0.422 ipTM=0.196 tol=8.99
2024-07-13 22:37:36,605 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=69.3 pTM=0.42 ipTM=0.196 tol=13.9
2024-07-13 22:40:16,436 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=69 pTM=0.424 ipTM=0.2 tol=9.48
2024-07-13 22:42:56,247 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=69.4 pTM=0.43 ipTM=0.205 tol=6.33
2024-07-13 22:45:35,991 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=69.6 pTM=0.433 ipTM=0.208 tol=3.35
2024-07-13 22:48:15,768 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=70.1 pTM=0.435 ipTM=0.211 tol=2.77
2024-07-13 22:50:55,618 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=70.1 pTM=0.434 ipTM=0.212 tol=3.04
2024-07-13 22:53:35,478 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=69.9 pTM=0.436 ipTM=0.21 tol=2.69
2024-07-13 22:56:15,282 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=70 pTM=0.436 ipTM=0.213 tol=2.7
2024-07-13 22:58:55,141 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=70.1 pTM=0.438 ipTM=0.214 tol=2.13
2024-07-13 23:01:34,907 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=70.1 pTM=0.438 ipTM=0.213 tol=3.39
2024-07-13 23:04:14,663 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=70.1 pTM=0.438 ipTM=0.211 tol=2.85
2024-07-13 23:06:54,434 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=70.2 pTM=0.438 ipTM=0.212 tol=2.91
2024-07-13 23:09:34,129 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=70.1 pTM=0.44 ipTM=0.215 tol=2.98
2024-07-13 23:12:13,786 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=70 pTM=0.439 ipTM=0.217 tol=2.78
2024-07-13 23:14:53,503 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=70 pTM=0.44 ipTM=0.212 tol=2.34
2024-07-13 23:17:33,254 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=70.4 pTM=0.44 ipTM=0.214 tol=2.64
2024-07-13 23:20:13,030 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=70.4 pTM=0.44 ipTM=0.215 tol=2.93
2024-07-13 23:22:52,823 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=70.6 pTM=0.439 ipTM=0.215 tol=3.34
2024-07-13 23:25:32,582 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=70.7 pTM=0.442 ipTM=0.215 tol=3.15
2024-07-13 23:28:12,393 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=70.5 pTM=0.441 ipTM=0.216 tol=1.81
2024-07-13 23:30:52,157 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=70.5 pTM=0.441 ipTM=0.214 tol=2.45
2024-07-13 23:33:31,875 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=70.4 pTM=0.441 ipTM=0.211 tol=1.94
2024-07-13 23:36:11,530 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=70.6 pTM=0.44 ipTM=0.213 tol=2.24
2024-07-13 23:38:51,143 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=70.5 pTM=0.44 ipTM=0.213 tol=2.07
2024-07-13 23:41:30,873 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=70.3 pTM=0.437 ipTM=0.208 tol=3.02
2024-07-13 23:44:10,691 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=70.2 pTM=0.435 ipTM=0.211 tol=2.84
2024-07-13 23:46:50,495 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=70.1 pTM=0.438 ipTM=0.21 tol=3.08
2024-07-13 23:49:30,272 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=70.1 pTM=0.437 ipTM=0.211 tol=2.4
2024-07-13 23:52:10,016 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=70.2 pTM=0.437 ipTM=0.21 tol=2.98
2024-07-13 23:52:10,019 alphafold2_multimer_v3_model_5_seed_000 took 4953.1s (30 recycles)
2024-07-13 23:52:12,327 reranking models by 'multimer' metric
2024-07-13 23:52:34,976 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-13 23:58:24,471 Relaxation took 372.1s
2024-07-13 23:58:24,471 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=73.6 pTM=0.461 ipTM=0.228
2024-07-14 00:03:55,810 Relaxation took 331.3s
2024-07-14 00:03:55,811 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=70.2 pTM=0.437 ipTM=0.21
2024-07-14 00:07:49,615 Relaxation took 233.8s
2024-07-14 00:07:49,616 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=71.8 pTM=0.447 ipTM=0.207
2024-07-14 00:12:20,015 Relaxation took 270.4s
2024-07-14 00:12:20,015 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=71.9 pTM=0.44 ipTM=0.201
2024-07-14 00:16:59,186 Relaxation took 279.2s
2024-07-14 00:16:59,187 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=73.1 pTM=0.428 ipTM=0.2
2024-07-14 00:17:14,947 Done