2024-07-13 17:07:22,096 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 17:07:22,429 Running on GPU
2024-07-13 17:07:35,529 Found 6 citations for tools or databases
2024-07-13 17:07:35,529 Query 1/1: TR11B_NH2L1 (length 529)
2024-07-13 17:07:35,998 Sleeping for 8s. Reason: PENDING
2024-07-13 17:07:44,416 Sleeping for 5s. Reason: RUNNING
2024-07-13 17:07:49,823 Sleeping for 10s. Reason: RUNNING
2024-07-13 17:08:00,251 Sleeping for 6s. Reason: RUNNING
2024-07-13 17:08:06,665 Sleeping for 10s. Reason: RUNNING
2024-07-13 17:08:17,098 Sleeping for 6s. Reason: RUNNING
2024-07-13 17:08:23,513 Sleeping for 9s. Reason: RUNNING
2024-07-13 17:08:32,940 Sleeping for 7s. Reason: RUNNING
2024-07-13 17:08:41,973 Sleeping for 7s. Reason: PENDING
2024-07-13 17:08:49,387 Sleeping for 8s. Reason: RUNNING
2024-07-13 17:08:57,814 Sleeping for 5s. Reason: RUNNING
2024-07-13 17:09:03,223 Sleeping for 8s. Reason: RUNNING
2024-07-13 17:09:11,647 Sleeping for 10s. Reason: RUNNING
2024-07-13 17:09:23,931 Setting max_seq=508, max_extra_seq=2048
2024-07-13 17:13:31,803 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=77.3 pTM=0.411 ipTM=0.314
2024-07-13 17:13:37,779 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=77.2 pTM=0.413 ipTM=0.175 tol=4.16
2024-07-13 17:13:43,759 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=77.1 pTM=0.41 ipTM=0.17 tol=2.67
2024-07-13 17:13:49,738 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=77.7 pTM=0.412 ipTM=0.155 tol=1.54
2024-07-13 17:13:55,716 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=78 pTM=0.414 ipTM=0.138 tol=2.33
2024-07-13 17:14:01,704 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=78.6 pTM=0.415 ipTM=0.15 tol=2.58
2024-07-13 17:14:07,697 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=78.7 pTM=0.412 ipTM=0.183 tol=1.85
2024-07-13 17:14:13,696 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=79.1 pTM=0.411 ipTM=0.19 tol=1.93
2024-07-13 17:14:19,698 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=79.1 pTM=0.409 ipTM=0.227 tol=1.55
2024-07-13 17:14:25,707 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=79.2 pTM=0.41 ipTM=0.198 tol=1.35
2024-07-13 17:14:31,724 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=79.2 pTM=0.411 ipTM=0.19 tol=0.747
2024-07-13 17:14:37,735 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=79.3 pTM=0.41 ipTM=0.2 tol=1.03
2024-07-13 17:14:43,748 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=79 pTM=0.409 ipTM=0.236 tol=1.23
2024-07-13 17:14:49,768 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=78.9 pTM=0.407 ipTM=0.208 tol=0.687
2024-07-13 17:14:55,786 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=78.6 pTM=0.412 ipTM=0.185 tol=2.58
2024-07-13 17:15:01,806 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=78.8 pTM=0.409 ipTM=0.217 tol=1.79
2024-07-13 17:15:07,834 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=79 pTM=0.41 ipTM=0.239 tol=1.45
2024-07-13 17:15:13,867 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=79 pTM=0.408 ipTM=0.202 tol=0.897
2024-07-13 17:15:19,896 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=78.6 pTM=0.41 ipTM=0.225 tol=1.17
2024-07-13 17:15:25,935 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=79.2 pTM=0.408 ipTM=0.201 tol=1.29
2024-07-13 17:15:31,971 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=79.1 pTM=0.409 ipTM=0.198 tol=0.88
2024-07-13 17:15:38,010 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=79.1 pTM=0.408 ipTM=0.189 tol=0.562
2024-07-13 17:15:44,045 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=79 pTM=0.41 ipTM=0.24 tol=0.97
2024-07-13 17:15:50,086 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=79.1 pTM=0.407 ipTM=0.189 tol=1.15
2024-07-13 17:15:56,122 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=78.6 pTM=0.408 ipTM=0.193 tol=1.48
2024-07-13 17:16:02,162 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=78.8 pTM=0.408 ipTM=0.187 tol=0.808
2024-07-13 17:16:08,201 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=78.8 pTM=0.408 ipTM=0.215 tol=0.979
2024-07-13 17:16:14,244 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=79.2 pTM=0.408 ipTM=0.198 tol=0.48
2024-07-13 17:16:14,244 alphafold2_multimer_v3_model_1_seed_000 took 334.4s (27 recycles)
2024-07-13 17:16:20,474 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=76.9 pTM=0.418 ipTM=0.192
2024-07-13 17:16:26,530 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=80.6 pTM=0.412 ipTM=0.336 tol=13.2
2024-07-13 17:16:32,579 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=81.3 pTM=0.413 ipTM=0.299 tol=3.1
2024-07-13 17:16:38,637 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=80.4 pTM=0.409 ipTM=0.251 tol=5.52
2024-07-13 17:16:44,693 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=80.4 pTM=0.408 ipTM=0.211 tol=2.72
2024-07-13 17:16:50,754 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=80.6 pTM=0.41 ipTM=0.23 tol=1.97
2024-07-13 17:16:56,808 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=80.2 pTM=0.41 ipTM=0.216 tol=4.32
2024-07-13 17:17:02,870 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=81 pTM=0.412 ipTM=0.217 tol=2.2
2024-07-13 17:17:08,924 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=80.7 pTM=0.413 ipTM=0.204 tol=1.98
2024-07-13 17:17:14,982 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=80.6 pTM=0.416 ipTM=0.227 tol=1.67
2024-07-13 17:17:21,046 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=81 pTM=0.417 ipTM=0.233 tol=1.1
2024-07-13 17:17:27,104 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=80.6 pTM=0.417 ipTM=0.232 tol=1.05
2024-07-13 17:17:33,159 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=80.3 pTM=0.416 ipTM=0.225 tol=1.08
2024-07-13 17:17:39,210 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=80.1 pTM=0.416 ipTM=0.218 tol=1.26
2024-07-13 17:17:45,263 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=80.1 pTM=0.417 ipTM=0.206 tol=1.37
2024-07-13 17:17:51,317 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=80.4 pTM=0.416 ipTM=0.222 tol=1.51
2024-07-13 17:17:57,372 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=80.8 pTM=0.416 ipTM=0.234 tol=1.1
2024-07-13 17:18:03,424 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=80.1 pTM=0.416 ipTM=0.211 tol=1.71
2024-07-13 17:18:09,475 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=79.9 pTM=0.42 ipTM=0.198 tol=1.38
2024-07-13 17:18:15,529 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=80.1 pTM=0.418 ipTM=0.204 tol=1.26
2024-07-13 17:18:21,581 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=80.2 pTM=0.418 ipTM=0.19 tol=0.951
2024-07-13 17:18:27,636 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=80.1 pTM=0.42 ipTM=0.199 tol=1.04
2024-07-13 17:18:33,687 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=80.2 pTM=0.423 ipTM=0.187 tol=1.76
2024-07-13 17:18:39,738 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=80 pTM=0.42 ipTM=0.188 tol=1.05
2024-07-13 17:18:45,790 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=80 pTM=0.417 ipTM=0.192 tol=1.05
2024-07-13 17:18:51,845 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=80.1 pTM=0.416 ipTM=0.219 tol=1.24
2024-07-13 17:18:57,896 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=79.9 pTM=0.417 ipTM=0.203 tol=1.07
2024-07-13 17:19:03,949 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=80.1 pTM=0.416 ipTM=0.221 tol=1.01
2024-07-13 17:19:10,009 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=80.1 pTM=0.416 ipTM=0.255 tol=2.78
2024-07-13 17:19:16,069 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=80.9 pTM=0.413 ipTM=0.197 tol=4.52
2024-07-13 17:19:22,131 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=80.4 pTM=0.414 ipTM=0.222 tol=1.6
2024-07-13 17:19:22,132 alphafold2_multimer_v3_model_2_seed_000 took 187.7s (30 recycles)
2024-07-13 17:19:28,370 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=76.9 pTM=0.406 ipTM=0.148
2024-07-13 17:19:34,429 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=76.1 pTM=0.396 ipTM=0.223 tol=11
2024-07-13 17:19:40,473 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=77 pTM=0.402 ipTM=0.237 tol=6.65
2024-07-13 17:19:46,516 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=76.5 pTM=0.409 ipTM=0.156 tol=6.16
2024-07-13 17:19:52,550 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=75.4 pTM=0.408 ipTM=0.181 tol=1.66
2024-07-13 17:19:58,586 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=76.3 pTM=0.408 ipTM=0.237 tol=2.82
2024-07-13 17:20:04,624 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=75.8 pTM=0.411 ipTM=0.182 tol=3.38
2024-07-13 17:20:10,654 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=75.6 pTM=0.409 ipTM=0.189 tol=1.66
2024-07-13 17:20:16,685 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=75.6 pTM=0.407 ipTM=0.209 tol=1.93
2024-07-13 17:20:22,719 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=75.6 pTM=0.41 ipTM=0.167 tol=2.22
2024-07-13 17:20:28,755 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=75.2 pTM=0.412 ipTM=0.174 tol=1.2
2024-07-13 17:20:34,791 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=75.9 pTM=0.409 ipTM=0.206 tol=1.91
2024-07-13 17:20:40,825 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=75.9 pTM=0.411 ipTM=0.18 tol=2.47
2024-07-13 17:20:46,855 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=75.2 pTM=0.409 ipTM=0.189 tol=1.29
2024-07-13 17:20:52,889 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=75.5 pTM=0.408 ipTM=0.218 tol=2.09
2024-07-13 17:20:58,922 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=76 pTM=0.412 ipTM=0.188 tol=2.57
2024-07-13 17:21:04,957 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=75.3 pTM=0.407 ipTM=0.194 tol=1.29
2024-07-13 17:21:10,994 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=76.3 pTM=0.408 ipTM=0.237 tol=2.32
2024-07-13 17:21:17,032 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=75.4 pTM=0.41 ipTM=0.183 tol=2.71
2024-07-13 17:21:23,069 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=75.4 pTM=0.409 ipTM=0.2 tol=1.09
2024-07-13 17:21:29,105 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=75.9 pTM=0.408 ipTM=0.198 tol=0.964
2024-07-13 17:21:35,141 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=75.5 pTM=0.408 ipTM=0.194 tol=1.09
2024-07-13 17:21:41,180 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=75.8 pTM=0.409 ipTM=0.2 tol=0.901
2024-07-13 17:21:47,216 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=75.2 pTM=0.409 ipTM=0.177 tol=0.845
2024-07-13 17:21:53,252 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=75.5 pTM=0.408 ipTM=0.21 tol=1.35
2024-07-13 17:21:59,289 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=75.7 pTM=0.409 ipTM=0.18 tol=2.16
2024-07-13 17:22:05,326 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=75.4 pTM=0.406 ipTM=0.203 tol=1.12
2024-07-13 17:22:11,363 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=75.8 pTM=0.406 ipTM=0.225 tol=1.61
2024-07-13 17:22:17,394 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=75.7 pTM=0.411 ipTM=0.202 tol=2.78
2024-07-13 17:22:23,424 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=74.9 pTM=0.409 ipTM=0.197 tol=1.17
2024-07-13 17:22:29,464 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=76.1 pTM=0.408 ipTM=0.223 tol=2.05
2024-07-13 17:22:29,465 alphafold2_multimer_v3_model_3_seed_000 took 187.1s (30 recycles)
2024-07-13 17:22:35,700 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=77.6 pTM=0.425 ipTM=0.175
2024-07-13 17:22:41,761 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=77.6 pTM=0.408 ipTM=0.229 tol=11.7
2024-07-13 17:22:47,816 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=76.9 pTM=0.412 ipTM=0.192 tol=5.06
2024-07-13 17:22:53,880 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=78.1 pTM=0.407 ipTM=0.195 tol=1.72
2024-07-13 17:22:59,939 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=78.1 pTM=0.407 ipTM=0.202 tol=3.45
2024-07-13 17:23:06,001 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=78.3 pTM=0.408 ipTM=0.224 tol=2.48
2024-07-13 17:23:12,078 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=78 pTM=0.406 ipTM=0.203 tol=2.62
2024-07-13 17:23:18,140 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=78.8 pTM=0.408 ipTM=0.221 tol=2.12
2024-07-13 17:23:24,196 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=78.2 pTM=0.406 ipTM=0.208 tol=2.17
2024-07-13 17:23:30,251 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=78.1 pTM=0.407 ipTM=0.232 tol=1.1
2024-07-13 17:23:36,307 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=78.6 pTM=0.412 ipTM=0.213 tol=2.98
2024-07-13 17:23:42,365 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=78.9 pTM=0.409 ipTM=0.251 tol=1.28
2024-07-13 17:23:48,420 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=78.4 pTM=0.408 ipTM=0.213 tol=0.742
2024-07-13 17:23:54,478 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=78 pTM=0.407 ipTM=0.233 tol=1.34
2024-07-13 17:24:00,538 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=75.8 pTM=0.407 ipTM=0.208 tol=6.12
2024-07-13 17:24:06,599 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=78.1 pTM=0.407 ipTM=0.228 tol=6.02
2024-07-13 17:24:12,652 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=78.4 pTM=0.407 ipTM=0.214 tol=3.23
2024-07-13 17:24:18,708 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=78.2 pTM=0.407 ipTM=0.232 tol=1.66
2024-07-13 17:24:24,763 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=78.1 pTM=0.408 ipTM=0.201 tol=0.822
2024-07-13 17:24:30,819 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=78.1 pTM=0.406 ipTM=0.236 tol=1.18
2024-07-13 17:24:36,876 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=78.3 pTM=0.408 ipTM=0.199 tol=1.33
2024-07-13 17:24:42,929 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=78.2 pTM=0.41 ipTM=0.23 tol=0.949
2024-07-13 17:24:48,987 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=77.9 pTM=0.407 ipTM=0.206 tol=1.08
2024-07-13 17:24:55,039 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=77.9 pTM=0.407 ipTM=0.225 tol=0.92
2024-07-13 17:25:01,094 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=78.1 pTM=0.406 ipTM=0.202 tol=1.05
2024-07-13 17:25:07,151 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=78.1 pTM=0.407 ipTM=0.225 tol=0.827
2024-07-13 17:25:13,208 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=77.9 pTM=0.406 ipTM=0.209 tol=0.96
2024-07-13 17:25:19,263 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=78.1 pTM=0.406 ipTM=0.237 tol=2.28
2024-07-13 17:25:25,318 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=78.4 pTM=0.408 ipTM=0.209 tol=2.22
2024-07-13 17:25:31,371 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=78 pTM=0.407 ipTM=0.223 tol=1.82
2024-07-13 17:25:37,428 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=78.1 pTM=0.406 ipTM=0.203 tol=1.37
2024-07-13 17:25:37,429 alphafold2_multimer_v3_model_4_seed_000 took 187.8s (30 recycles)
2024-07-13 17:25:43,660 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=76.3 pTM=0.424 ipTM=0.161
2024-07-13 17:25:49,703 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=76.4 pTM=0.414 ipTM=0.178 tol=12.6
2024-07-13 17:25:55,743 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=75.6 pTM=0.406 ipTM=0.146 tol=4.77
2024-07-13 17:26:01,790 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=77.1 pTM=0.405 ipTM=0.141 tol=2.87
2024-07-13 17:26:07,830 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=76.6 pTM=0.405 ipTM=0.191 tol=5.56
2024-07-13 17:26:13,869 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=76.9 pTM=0.409 ipTM=0.191 tol=1.64
2024-07-13 17:26:19,904 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=76.6 pTM=0.412 ipTM=0.17 tol=1.96
2024-07-13 17:26:25,944 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=76.6 pTM=0.415 ipTM=0.185 tol=1.19
2024-07-13 17:26:31,980 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=76.6 pTM=0.413 ipTM=0.19 tol=0.979
2024-07-13 17:26:38,014 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=76.2 pTM=0.416 ipTM=0.19 tol=0.875
2024-07-13 17:26:44,048 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=76.4 pTM=0.418 ipTM=0.177 tol=1.2
2024-07-13 17:26:50,087 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=77.1 pTM=0.417 ipTM=0.188 tol=1.39
2024-07-13 17:26:56,121 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=76.3 pTM=0.416 ipTM=0.185 tol=1.2
2024-07-13 17:27:02,153 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=76.1 pTM=0.416 ipTM=0.182 tol=1.53
2024-07-13 17:27:08,196 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=76.6 pTM=0.42 ipTM=0.174 tol=1.47
2024-07-13 17:27:14,233 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=76.4 pTM=0.416 ipTM=0.196 tol=2.02
2024-07-13 17:27:20,272 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=76.8 pTM=0.415 ipTM=0.196 tol=0.674
2024-07-13 17:27:26,314 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=76.8 pTM=0.416 ipTM=0.17 tol=1.11
2024-07-13 17:27:32,349 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=76 pTM=0.416 ipTM=0.2 tol=1.3
2024-07-13 17:27:38,387 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=76.3 pTM=0.415 ipTM=0.19 tol=1.33
2024-07-13 17:27:44,426 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=77 pTM=0.414 ipTM=0.196 tol=1.69
2024-07-13 17:27:50,465 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=76.7 pTM=0.416 ipTM=0.189 tol=2.18
2024-07-13 17:27:56,502 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=77.2 pTM=0.418 ipTM=0.184 tol=1.2
2024-07-13 17:28:02,539 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=76.6 pTM=0.415 ipTM=0.199 tol=2.1
2024-07-13 17:28:08,576 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=76.8 pTM=0.414 ipTM=0.201 tol=1.5
2024-07-13 17:28:14,610 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=76.8 pTM=0.414 ipTM=0.189 tol=1.29
2024-07-13 17:28:20,643 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=76.4 pTM=0.413 ipTM=0.21 tol=1.53
2024-07-13 17:28:26,678 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=76.4 pTM=0.413 ipTM=0.203 tol=1
2024-07-13 17:28:32,712 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=76.7 pTM=0.415 ipTM=0.186 tol=1.33
2024-07-13 17:28:38,747 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=76.4 pTM=0.415 ipTM=0.199 tol=1.16
2024-07-13 17:28:44,781 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=76.7 pTM=0.415 ipTM=0.19 tol=0.927
2024-07-13 17:28:44,782 alphafold2_multimer_v3_model_5_seed_000 took 187.2s (30 recycles)
2024-07-13 17:28:44,970 reranking models by 'multimer' metric
2024-07-13 17:28:45,773 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-13 17:29:17,949 Relaxation took 33.0s
2024-07-13 17:29:17,949 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=76.1 pTM=0.408 ipTM=0.223
2024-07-13 17:30:02,711 Relaxation took 44.8s
2024-07-13 17:30:02,711 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=80.4 pTM=0.414 ipTM=0.222
2024-07-13 17:30:34,999 Relaxation took 32.3s
2024-07-13 17:30:34,999 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=78.1 pTM=0.406 ipTM=0.203
2024-07-13 17:30:53,900 Relaxation took 18.9s
2024-07-13 17:30:53,900 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=79.2 pTM=0.408 ipTM=0.198
2024-07-13 17:31:13,167 Relaxation took 19.3s
2024-07-13 17:31:13,167 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=76.7 pTM=0.415 ipTM=0.19
2024-07-13 17:31:14,239 Done