2024-07-13 17:32:45,468 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 17:32:45,817 Running on GPU
2024-07-13 17:33:03,814 Found 6 citations for tools or databases
2024-07-13 17:33:03,814 Query 1/1: TRDN_CR2 (length 1762)
2024-07-13 17:33:04,253 Sleeping for 10s. Reason: PENDING
2024-07-13 17:33:14,681 Sleeping for 7s. Reason: RUNNING
2024-07-13 17:33:22,099 Sleeping for 8s. Reason: RUNNING
2024-07-13 17:33:30,534 Sleeping for 5s. Reason: RUNNING
2024-07-13 17:33:35,950 Sleeping for 9s. Reason: RUNNING
2024-07-13 17:33:45,379 Sleeping for 6s. Reason: RUNNING
2024-07-13 17:33:51,798 Sleeping for 7s. Reason: RUNNING
2024-07-13 17:33:59,242 Sleeping for 8s. Reason: RUNNING
2024-07-13 17:34:07,689 Sleeping for 5s. Reason: RUNNING
2024-07-13 17:34:13,099 Sleeping for 10s. Reason: RUNNING
2024-07-13 17:34:23,541 Sleeping for 9s. Reason: RUNNING
2024-07-13 17:34:32,983 Sleeping for 8s. Reason: RUNNING
2024-07-13 17:34:41,407 Sleeping for 9s. Reason: RUNNING
2024-07-13 17:34:52,640 Sleeping for 5s. Reason: PENDING
2024-07-13 17:34:58,083 Sleeping for 7s. Reason: RUNNING
2024-07-13 17:35:05,501 Sleeping for 9s. Reason: RUNNING
2024-07-13 17:35:14,931 Sleeping for 10s. Reason: RUNNING
2024-07-13 17:35:25,354 Sleeping for 8s. Reason: RUNNING
2024-07-13 17:35:33,771 Sleeping for 7s. Reason: RUNNING
2024-07-13 17:35:41,204 Sleeping for 5s. Reason: RUNNING
2024-07-13 17:35:46,632 Sleeping for 6s. Reason: RUNNING
2024-07-13 17:35:53,046 Sleeping for 7s. Reason: RUNNING
2024-07-13 17:36:06,361 Setting max_seq=508, max_extra_seq=2048
2024-07-13 17:41:35,414 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=49.7 pTM=0.24 ipTM=0.175
2024-07-13 17:43:22,089 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=50.2 pTM=0.236 ipTM=0.18 tol=24.9
2024-07-13 17:45:08,882 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=49.5 pTM=0.239 ipTM=0.177 tol=17.2
2024-07-13 17:46:55,632 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=49.7 pTM=0.235 ipTM=0.175 tol=23
2024-07-13 17:48:42,357 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=50.9 pTM=0.256 ipTM=0.176 tol=24.9
2024-07-13 17:50:29,023 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=50.9 pTM=0.264 ipTM=0.18 tol=10.7
2024-07-13 17:52:15,710 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=51 pTM=0.263 ipTM=0.182 tol=9.27
2024-07-13 17:54:02,337 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=50.9 pTM=0.266 ipTM=0.182 tol=8.77
2024-07-13 17:55:48,908 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=51 pTM=0.268 ipTM=0.181 tol=11
2024-07-13 17:57:35,476 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=51 pTM=0.263 ipTM=0.182 tol=7.87
2024-07-13 17:59:22,100 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=51 pTM=0.264 ipTM=0.181 tol=5.19
2024-07-13 18:01:08,772 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=51.1 pTM=0.265 ipTM=0.182 tol=4.72
2024-07-13 18:02:55,416 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=51.3 pTM=0.274 ipTM=0.18 tol=7.52
2024-07-13 18:04:41,967 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=51.1 pTM=0.275 ipTM=0.182 tol=7.5
2024-07-13 18:06:28,500 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=51.1 pTM=0.277 ipTM=0.181 tol=7.73
2024-07-13 18:08:14,995 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=51.6 pTM=0.285 ipTM=0.181 tol=3.45
2024-07-13 18:10:01,492 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=51.6 pTM=0.282 ipTM=0.182 tol=7.88
2024-07-13 18:11:48,019 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=51.4 pTM=0.282 ipTM=0.181 tol=5.92
2024-07-13 18:13:34,534 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=51.4 pTM=0.284 ipTM=0.182 tol=5.18
2024-07-13 18:15:21,058 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=51.4 pTM=0.284 ipTM=0.182 tol=10
2024-07-13 18:17:07,586 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=51.5 pTM=0.286 ipTM=0.183 tol=8.71
2024-07-13 18:18:54,122 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=51.5 pTM=0.288 ipTM=0.183 tol=9.66
2024-07-13 18:20:40,634 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=51.7 pTM=0.288 ipTM=0.184 tol=10.8
2024-07-13 18:22:27,165 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=51.6 pTM=0.287 ipTM=0.183 tol=5.92
2024-07-13 18:24:13,781 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=51.6 pTM=0.287 ipTM=0.181 tol=6.64
2024-07-13 18:26:00,348 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=51.6 pTM=0.287 ipTM=0.181 tol=6.96
2024-07-13 18:27:46,955 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=51.4 pTM=0.286 ipTM=0.181 tol=4.89
2024-07-13 18:29:33,544 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=51.5 pTM=0.287 ipTM=0.181 tol=13.1
2024-07-13 18:31:20,153 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=51.7 pTM=0.29 ipTM=0.183 tol=12.1
2024-07-13 18:33:06,716 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=51.7 pTM=0.291 ipTM=0.183 tol=5.58
2024-07-13 18:34:53,230 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=51.5 pTM=0.289 ipTM=0.181 tol=13.5
2024-07-13 18:34:53,232 alphafold2_multimer_v3_model_1_seed_000 took 3461.8s (30 recycles)
2024-07-13 18:36:41,721 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=49.6 pTM=0.252 ipTM=0.189
2024-07-13 18:38:28,347 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=51.9 pTM=0.253 ipTM=0.185 tol=26.8
2024-07-13 18:40:14,820 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=52.9 pTM=0.291 ipTM=0.19 tol=40.2
2024-07-13 18:42:01,201 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=53.5 pTM=0.307 ipTM=0.196 tol=16.6
2024-07-13 18:43:47,572 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=53.8 pTM=0.308 ipTM=0.2 tol=11.7
2024-07-13 18:45:33,987 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=53.8 pTM=0.307 ipTM=0.201 tol=7.7
2024-07-13 18:47:20,383 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=53.9 pTM=0.31 ipTM=0.201 tol=6.43
2024-07-13 18:49:06,808 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=53.8 pTM=0.31 ipTM=0.2 tol=5.82
2024-07-13 18:50:53,272 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=53.8 pTM=0.311 ipTM=0.202 tol=6.93
2024-07-13 18:52:39,726 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=53.8 pTM=0.311 ipTM=0.2 tol=4.83
2024-07-13 18:54:26,167 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=53.9 pTM=0.312 ipTM=0.202 tol=5.02
2024-07-13 18:56:12,636 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=53.9 pTM=0.311 ipTM=0.202 tol=7.58
2024-07-13 18:57:59,134 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=53.9 pTM=0.312 ipTM=0.201 tol=6.98
2024-07-13 18:59:45,601 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=53.9 pTM=0.311 ipTM=0.201 tol=4.64
2024-07-13 19:01:32,079 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=54 pTM=0.314 ipTM=0.201 tol=7.07
2024-07-13 19:03:18,546 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=54.1 pTM=0.317 ipTM=0.201 tol=4.82
2024-07-13 19:05:04,974 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=54 pTM=0.312 ipTM=0.203 tol=3.76
2024-07-13 19:06:51,491 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=54.1 pTM=0.314 ipTM=0.202 tol=4.76
2024-07-13 19:08:37,970 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=53.9 pTM=0.316 ipTM=0.202 tol=5.04
2024-07-13 19:10:24,423 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=54.1 pTM=0.319 ipTM=0.203 tol=4.66
2024-07-13 19:12:10,873 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=54 pTM=0.318 ipTM=0.201 tol=3.84
2024-07-13 19:13:57,328 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=54.1 pTM=0.319 ipTM=0.203 tol=3.51
2024-07-13 19:15:43,748 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54.3 pTM=0.322 ipTM=0.203 tol=4.48
2024-07-13 19:17:30,151 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=54.1 pTM=0.32 ipTM=0.202 tol=4.38
2024-07-13 19:19:16,532 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=54.2 pTM=0.322 ipTM=0.201 tol=4.54
2024-07-13 19:21:02,968 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=54.1 pTM=0.322 ipTM=0.202 tol=3.88
2024-07-13 19:22:49,430 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=54.1 pTM=0.324 ipTM=0.202 tol=4.1
2024-07-13 19:24:35,842 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=54.1 pTM=0.323 ipTM=0.202 tol=3.96
2024-07-13 19:26:22,216 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=54.2 pTM=0.323 ipTM=0.203 tol=4.58
2024-07-13 19:28:08,587 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=54.1 pTM=0.323 ipTM=0.202 tol=4.4
2024-07-13 19:29:54,956 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=54.2 pTM=0.323 ipTM=0.202 tol=4.24
2024-07-13 19:29:54,958 alphafold2_multimer_v3_model_2_seed_000 took 3299.9s (30 recycles)
2024-07-13 19:31:43,982 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=48.3 pTM=0.246 ipTM=0.169
2024-07-13 19:33:31,213 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=49.9 pTM=0.253 ipTM=0.166 tol=33
2024-07-13 19:35:18,302 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=47.6 pTM=0.26 ipTM=0.162 tol=46.6
2024-07-13 19:37:05,364 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=51.2 pTM=0.294 ipTM=0.163 tol=56.1
2024-07-13 19:38:52,311 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=52.1 pTM=0.315 ipTM=0.166 tol=20.1
2024-07-13 19:40:39,330 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=52.2 pTM=0.315 ipTM=0.167 tol=15
2024-07-13 19:42:26,313 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=52.6 pTM=0.319 ipTM=0.169 tol=9.17
2024-07-13 19:44:13,288 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=52.6 pTM=0.32 ipTM=0.169 tol=11.9
2024-07-13 19:46:00,321 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=52.6 pTM=0.32 ipTM=0.17 tol=11
2024-07-13 19:47:47,371 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=52.6 pTM=0.322 ipTM=0.171 tol=7.06
2024-07-13 19:49:34,380 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=52.6 pTM=0.321 ipTM=0.172 tol=7.1
2024-07-13 19:51:21,353 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=52.7 pTM=0.321 ipTM=0.174 tol=6.38
2024-07-13 19:53:08,324 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=52.8 pTM=0.323 ipTM=0.174 tol=7.13
2024-07-13 19:54:55,281 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=52.8 pTM=0.323 ipTM=0.176 tol=4.95
2024-07-13 19:56:42,234 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=52.7 pTM=0.322 ipTM=0.175 tol=2.9
2024-07-13 19:58:29,182 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=52.6 pTM=0.321 ipTM=0.175 tol=3.94
2024-07-13 20:00:16,110 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=52.6 pTM=0.32 ipTM=0.175 tol=4.26
2024-07-13 20:02:02,988 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=52.6 pTM=0.321 ipTM=0.175 tol=5.13
2024-07-13 20:03:49,898 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=52.7 pTM=0.322 ipTM=0.174 tol=4.64
2024-07-13 20:05:36,793 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=52.7 pTM=0.321 ipTM=0.173 tol=4.05
2024-07-13 20:07:23,700 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=52.6 pTM=0.322 ipTM=0.173 tol=3.99
2024-07-13 20:09:10,615 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=52.7 pTM=0.323 ipTM=0.172 tol=3.4
2024-07-13 20:10:57,522 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=52.7 pTM=0.323 ipTM=0.172 tol=7.88
2024-07-13 20:12:44,445 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=52.7 pTM=0.323 ipTM=0.172 tol=8.45
2024-07-13 20:14:31,344 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=52.7 pTM=0.323 ipTM=0.172 tol=4.21
2024-07-13 20:16:18,256 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=52.5 pTM=0.323 ipTM=0.173 tol=11.6
2024-07-13 20:18:05,161 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=52.6 pTM=0.323 ipTM=0.169 tol=11.4
2024-07-13 20:19:52,081 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=52.7 pTM=0.324 ipTM=0.17 tol=5.77
2024-07-13 20:21:39,040 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=52.6 pTM=0.321 ipTM=0.172 tol=3.56
2024-07-13 20:23:26,002 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=52.6 pTM=0.322 ipTM=0.172 tol=3.16
2024-07-13 20:25:12,944 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=52.6 pTM=0.321 ipTM=0.172 tol=3.19
2024-07-13 20:25:12,946 alphafold2_multimer_v3_model_3_seed_000 took 3316.2s (30 recycles)
2024-07-13 20:27:02,010 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=47.5 pTM=0.244 ipTM=0.162
2024-07-13 20:28:49,121 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=49.6 pTM=0.281 ipTM=0.158 tol=41.4
2024-07-13 20:30:36,155 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=50.3 pTM=0.309 ipTM=0.164 tol=19.3
2024-07-13 20:32:23,143 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=50.6 pTM=0.312 ipTM=0.163 tol=22.4
2024-07-13 20:34:10,013 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=51.3 pTM=0.321 ipTM=0.165 tol=14.6
2024-07-13 20:35:56,921 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=50.9 pTM=0.318 ipTM=0.166 tol=9.77
2024-07-13 20:37:43,850 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=51.1 pTM=0.318 ipTM=0.167 tol=9.09
2024-07-13 20:39:30,775 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=50.8 pTM=0.316 ipTM=0.166 tol=9.09
2024-07-13 20:41:17,694 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=50.9 pTM=0.314 ipTM=0.168 tol=9.91
2024-07-13 20:43:04,691 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=50.8 pTM=0.316 ipTM=0.167 tol=8.91
2024-07-13 20:44:51,635 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=50.8 pTM=0.316 ipTM=0.168 tol=7.39
2024-07-13 20:46:38,608 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=50.9 pTM=0.312 ipTM=0.166 tol=8.22
2024-07-13 20:48:25,578 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=50.9 pTM=0.313 ipTM=0.168 tol=6.65
2024-07-13 20:50:12,503 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=50.9 pTM=0.314 ipTM=0.17 tol=7.19
2024-07-13 20:51:59,464 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=50.8 pTM=0.312 ipTM=0.169 tol=8.15
2024-07-13 20:53:46,411 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=50.7 pTM=0.312 ipTM=0.168 tol=8.57
2024-07-13 20:55:33,382 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=50.8 pTM=0.314 ipTM=0.168 tol=8.67
2024-07-13 20:57:20,436 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=50.8 pTM=0.312 ipTM=0.168 tol=7.86
2024-07-13 20:59:07,418 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=50.9 pTM=0.313 ipTM=0.168 tol=8.44
2024-07-13 21:00:54,416 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=50.9 pTM=0.314 ipTM=0.166 tol=6.29
2024-07-13 21:02:41,346 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=50.9 pTM=0.317 ipTM=0.166 tol=6.01
2024-07-13 21:04:28,290 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=51 pTM=0.316 ipTM=0.168 tol=6.22
2024-07-13 21:06:15,197 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=50.9 pTM=0.315 ipTM=0.168 tol=6.14
2024-07-13 21:08:02,144 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=50.8 pTM=0.314 ipTM=0.168 tol=7.84
2024-07-13 21:09:49,053 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=50.8 pTM=0.316 ipTM=0.167 tol=7.98
2024-07-13 21:11:36,060 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=51 pTM=0.317 ipTM=0.168 tol=7.3
2024-07-13 21:13:23,060 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=50.9 pTM=0.316 ipTM=0.168 tol=5.86
2024-07-13 21:15:10,019 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=51 pTM=0.318 ipTM=0.169 tol=8.7
2024-07-13 21:16:56,952 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=51 pTM=0.317 ipTM=0.168 tol=8.44
2024-07-13 21:18:43,835 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=50.9 pTM=0.315 ipTM=0.167 tol=9.67
2024-07-13 21:20:30,731 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=50.9 pTM=0.315 ipTM=0.167 tol=9.56
2024-07-13 21:20:30,733 alphafold2_multimer_v3_model_4_seed_000 took 3316.0s (30 recycles)
2024-07-13 21:22:19,643 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=47.9 pTM=0.256 ipTM=0.163
2024-07-13 21:24:06,640 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=48.5 pTM=0.246 ipTM=0.167 tol=28
2024-07-13 21:25:53,560 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=50.7 pTM=0.293 ipTM=0.163 tol=31.4
2024-07-13 21:27:40,473 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=51.1 pTM=0.301 ipTM=0.169 tol=16.8
2024-07-13 21:29:27,349 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=51.6 pTM=0.305 ipTM=0.169 tol=12.2
2024-07-13 21:31:14,291 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=51.3 pTM=0.301 ipTM=0.169 tol=10.4
2024-07-13 21:33:01,213 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=51.7 pTM=0.305 ipTM=0.169 tol=9.41
2024-07-13 21:34:48,135 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=51.4 pTM=0.306 ipTM=0.169 tol=10.3
2024-07-13 21:36:35,090 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=51.4 pTM=0.305 ipTM=0.169 tol=4.52
2024-07-13 21:38:22,009 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=51.5 pTM=0.306 ipTM=0.168 tol=4.66
2024-07-13 21:40:08,874 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=51.5 pTM=0.305 ipTM=0.169 tol=9.55
2024-07-13 21:41:55,721 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=51.6 pTM=0.306 ipTM=0.17 tol=5.76
2024-07-13 21:43:42,570 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=51.5 pTM=0.307 ipTM=0.169 tol=8.55
2024-07-13 21:45:29,416 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=51.4 pTM=0.305 ipTM=0.17 tol=9.27
2024-07-13 21:47:16,233 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=51.6 pTM=0.306 ipTM=0.171 tol=9.32
2024-07-13 21:49:03,110 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=51.5 pTM=0.304 ipTM=0.171 tol=9.67
2024-07-13 21:50:49,984 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=51.6 pTM=0.305 ipTM=0.171 tol=9.02
2024-07-13 21:52:36,848 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=51.6 pTM=0.304 ipTM=0.171 tol=7.41
2024-07-13 21:54:23,720 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=51.6 pTM=0.305 ipTM=0.17 tol=5.78
2024-07-13 21:56:10,603 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=51.6 pTM=0.306 ipTM=0.17 tol=10.2
2024-07-13 21:57:57,517 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=51.5 pTM=0.307 ipTM=0.171 tol=5.53
2024-07-13 21:59:44,388 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=51.6 pTM=0.311 ipTM=0.171 tol=5
2024-07-13 22:01:31,250 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=51.7 pTM=0.31 ipTM=0.171 tol=8.77
2024-07-13 22:03:18,146 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=51.7 pTM=0.311 ipTM=0.171 tol=4.78
2024-07-13 22:05:05,057 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=51.7 pTM=0.313 ipTM=0.171 tol=4.09
2024-07-13 22:06:51,969 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=51.7 pTM=0.314 ipTM=0.172 tol=7.96
2024-07-13 22:08:38,845 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=51.7 pTM=0.315 ipTM=0.172 tol=7.59
2024-07-13 22:10:25,737 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=51.8 pTM=0.317 ipTM=0.172 tol=8.01
2024-07-13 22:12:12,633 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=51.9 pTM=0.317 ipTM=0.172 tol=8.6
2024-07-13 22:13:59,519 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=51.8 pTM=0.317 ipTM=0.171 tol=8.91
2024-07-13 22:15:46,437 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=51.7 pTM=0.316 ipTM=0.172 tol=9.18
2024-07-13 22:15:46,439 alphafold2_multimer_v3_model_5_seed_000 took 3313.9s (30 recycles)
2024-07-13 22:15:48,241 reranking models by 'multimer' metric
2024-07-13 22:16:03,795 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-13 22:19:08,246 Relaxation took 200.0s
2024-07-13 22:19:08,247 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=54.2 pTM=0.323 ipTM=0.202
2024-07-13 22:24:35,701 Relaxation took 327.5s
2024-07-13 22:24:35,701 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=51.5 pTM=0.289 ipTM=0.181
2024-07-13 22:27:42,165 Relaxation took 186.5s
2024-07-13 22:27:42,165 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=52.6 pTM=0.321 ipTM=0.172
2024-07-13 22:30:36,604 Relaxation took 174.4s
2024-07-13 22:30:36,605 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=51.7 pTM=0.316 ipTM=0.172
2024-07-13 22:34:49,353 Relaxation took 252.7s
2024-07-13 22:34:49,354 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=50.9 pTM=0.315 ipTM=0.167
2024-07-13 22:34:56,364 Done