2024-07-13 19:49:37,537 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-13 19:49:37,870 Running on GPU 2024-07-13 19:49:56,485 Found 6 citations for tools or databases 2024-07-13 19:49:56,485 Query 1/1: TTC4_LGUL (length 571) 2024-07-13 19:49:56,976 Sleeping for 6s. Reason: PENDING 2024-07-13 19:50:03,407 Sleeping for 9s. Reason: RUNNING 2024-07-13 19:50:12,843 Sleeping for 8s. Reason: RUNNING 2024-07-13 19:50:21,282 Sleeping for 5s. Reason: RUNNING 2024-07-13 19:50:26,693 Sleeping for 5s. Reason: RUNNING 2024-07-13 19:50:32,113 Sleeping for 10s. Reason: RUNNING 2024-07-13 19:50:42,546 Sleeping for 6s. Reason: RUNNING 2024-07-13 19:50:48,981 Sleeping for 6s. Reason: RUNNING 2024-07-13 19:50:55,400 Sleeping for 5s. Reason: RUNNING 2024-07-13 19:51:00,819 Sleeping for 7s. Reason: RUNNING 2024-07-13 19:51:08,256 Sleeping for 5s. Reason: RUNNING 2024-07-13 19:51:13,680 Sleeping for 8s. Reason: RUNNING 2024-07-13 19:51:22,105 Sleeping for 10s. Reason: RUNNING 2024-07-13 19:51:32,547 Sleeping for 9s. Reason: RUNNING 2024-07-13 19:51:41,970 Sleeping for 9s. Reason: RUNNING 2024-07-13 19:51:51,385 Sleeping for 8s. Reason: RUNNING 2024-07-13 19:51:59,805 Sleeping for 10s. Reason: RUNNING 2024-07-13 19:52:10,222 Sleeping for 10s. Reason: RUNNING 2024-07-13 19:52:20,652 Sleeping for 8s. Reason: RUNNING 2024-07-13 19:52:31,355 Sleeping for 9s. Reason: PENDING 2024-07-13 19:52:40,771 Sleeping for 10s. Reason: RUNNING 2024-07-13 19:52:51,202 Sleeping for 6s. Reason: RUNNING 2024-07-13 19:52:57,615 Sleeping for 6s. Reason: RUNNING 2024-07-13 19:53:04,031 Sleeping for 5s. Reason: RUNNING 2024-07-13 19:53:09,463 Sleeping for 10s. Reason: RUNNING 2024-07-13 19:53:19,880 Sleeping for 8s. Reason: RUNNING 2024-07-13 19:53:28,293 Sleeping for 7s. Reason: RUNNING 2024-07-13 19:53:35,765 Sleeping for 8s. Reason: RUNNING 2024-07-13 19:53:44,178 Sleeping for 9s. Reason: RUNNING 2024-07-13 19:53:53,606 Sleeping for 9s. Reason: RUNNING 2024-07-13 19:54:05,764 Setting max_seq=508, max_extra_seq=2048 2024-07-13 19:57:41,455 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=81.1 pTM=0.418 ipTM=0.151 2024-07-13 19:57:48,147 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=81.6 pTM=0.45 ipTM=0.184 tol=15.9 2024-07-13 19:57:54,855 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=80.8 pTM=0.422 ipTM=0.113 tol=4 2024-07-13 19:58:01,588 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=81.9 pTM=0.413 ipTM=0.103 tol=5.15 2024-07-13 19:58:08,313 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=82 pTM=0.419 ipTM=0.12 tol=3.83 2024-07-13 19:58:15,048 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=82.1 pTM=0.423 ipTM=0.135 tol=2.72 2024-07-13 19:58:21,791 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=82 pTM=0.419 ipTM=0.13 tol=1.68 2024-07-13 19:58:28,540 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=81.6 pTM=0.409 ipTM=0.117 tol=2.45 2024-07-13 19:58:35,299 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=81.5 pTM=0.405 ipTM=0.11 tol=3.41 2024-07-13 19:58:42,056 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=81.2 pTM=0.425 ipTM=0.134 tol=5.86 2024-07-13 19:58:48,812 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=80.9 pTM=0.42 ipTM=0.123 tol=2.6 2024-07-13 19:58:55,586 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=81.4 pTM=0.422 ipTM=0.121 tol=0.516 2024-07-13 19:59:02,382 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=81.2 pTM=0.423 ipTM=0.123 tol=0.714 2024-07-13 19:59:09,165 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=81.2 pTM=0.414 ipTM=0.114 tol=2.45 2024-07-13 19:59:15,953 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=81.4 pTM=0.427 ipTM=0.123 tol=2.53 2024-07-13 19:59:22,751 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=81.1 pTM=0.416 ipTM=0.112 tol=1.38 2024-07-13 19:59:29,527 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=81.1 pTM=0.42 ipTM=0.115 tol=2.62 2024-07-13 19:59:36,327 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=81.6 pTM=0.417 ipTM=0.11 tol=1.99 2024-07-13 19:59:43,113 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=81.2 pTM=0.419 ipTM=0.118 tol=0.912 2024-07-13 19:59:49,898 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=81.5 pTM=0.419 ipTM=0.116 tol=1.77 2024-07-13 19:59:56,692 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=81.1 pTM=0.42 ipTM=0.126 tol=1.82 2024-07-13 20:00:03,489 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=81.5 pTM=0.412 ipTM=0.106 tol=2.69 2024-07-13 20:00:10,276 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=81.2 pTM=0.42 ipTM=0.12 tol=1.73 2024-07-13 20:00:17,067 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=81.5 pTM=0.419 ipTM=0.116 tol=1.37 2024-07-13 20:00:23,851 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=81.1 pTM=0.419 ipTM=0.123 tol=1.64 2024-07-13 20:00:30,642 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=81.1 pTM=0.416 ipTM=0.113 tol=1.55 2024-07-13 20:00:37,439 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=81.4 pTM=0.426 ipTM=0.113 tol=2.02 2024-07-13 20:00:44,240 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=81.2 pTM=0.421 ipTM=0.113 tol=1.26 2024-07-13 20:00:51,027 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=81 pTM=0.421 ipTM=0.115 tol=0.885 2024-07-13 20:00:57,819 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=81.1 pTM=0.421 ipTM=0.116 tol=1.36 2024-07-13 20:01:04,612 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=81.4 pTM=0.416 ipTM=0.114 tol=1.38 2024-07-13 20:01:04,613 alphafold2_multimer_v3_model_1_seed_000 took 366.4s (30 recycles) 2024-07-13 20:01:11,608 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=76.9 pTM=0.414 ipTM=0.142 2024-07-13 20:01:18,408 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=74.2 pTM=0.426 ipTM=0.115 tol=11.2 2024-07-13 20:01:25,240 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=78.2 pTM=0.418 ipTM=0.103 tol=13.2 2024-07-13 20:01:32,041 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=79.6 pTM=0.429 ipTM=0.111 tol=14.9 2024-07-13 20:01:38,856 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=80.2 pTM=0.418 ipTM=0.103 tol=4.7 2024-07-13 20:01:45,676 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=80 pTM=0.425 ipTM=0.109 tol=9.87 2024-07-13 20:01:52,484 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=81.1 pTM=0.426 ipTM=0.105 tol=4.38 2024-07-13 20:01:59,291 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=80.6 pTM=0.423 ipTM=0.1 tol=3.19 2024-07-13 20:02:06,105 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=81 pTM=0.428 ipTM=0.0993 tol=2.55 2024-07-13 20:02:12,920 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=81.2 pTM=0.425 ipTM=0.0966 tol=3.51 2024-07-13 20:02:19,738 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=80.8 pTM=0.421 ipTM=0.094 tol=6.04 2024-07-13 20:02:26,552 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=80.4 pTM=0.421 ipTM=0.102 tol=2.95 2024-07-13 20:02:33,368 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=79.8 pTM=0.423 ipTM=0.136 tol=10.2 2024-07-13 20:02:40,175 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=79.7 pTM=0.426 ipTM=0.15 tol=6.14 2024-07-13 20:02:46,999 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=80.2 pTM=0.428 ipTM=0.133 tol=4.43 2024-07-13 20:02:53,818 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=80.1 pTM=0.427 ipTM=0.142 tol=2.02 2024-07-13 20:03:00,639 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=80 pTM=0.422 ipTM=0.14 tol=1.42 2024-07-13 20:03:07,460 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=80.2 pTM=0.429 ipTM=0.146 tol=2.03 2024-07-13 20:03:14,276 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=80.4 pTM=0.423 ipTM=0.132 tol=4.45 2024-07-13 20:03:21,089 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=80.2 pTM=0.423 ipTM=0.143 tol=2.04 2024-07-13 20:03:27,900 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=80 pTM=0.424 ipTM=0.132 tol=2.04 2024-07-13 20:03:34,721 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=80.3 pTM=0.428 ipTM=0.142 tol=2.49 2024-07-13 20:03:41,534 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=79.8 pTM=0.422 ipTM=0.132 tol=2.47 2024-07-13 20:03:48,345 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=80.3 pTM=0.425 ipTM=0.139 tol=3.59 2024-07-13 20:03:55,159 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=80.2 pTM=0.423 ipTM=0.136 tol=1.4 2024-07-13 20:04:01,980 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=80.5 pTM=0.421 ipTM=0.13 tol=0.674 2024-07-13 20:04:08,800 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=80.1 pTM=0.429 ipTM=0.135 tol=3.7 2024-07-13 20:04:15,618 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=80 pTM=0.427 ipTM=0.146 tol=3.15 2024-07-13 20:04:22,441 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=80.2 pTM=0.426 ipTM=0.131 tol=2.66 2024-07-13 20:04:29,256 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=80.3 pTM=0.429 ipTM=0.145 tol=1.01 2024-07-13 20:04:36,072 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=80.4 pTM=0.427 ipTM=0.119 tol=5.07 2024-07-13 20:04:36,073 alphafold2_multimer_v3_model_2_seed_000 took 211.2s (30 recycles) 2024-07-13 20:04:43,095 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=76.6 pTM=0.436 ipTM=0.117 2024-07-13 20:04:49,884 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=75.1 pTM=0.425 ipTM=0.115 tol=20.7 2024-07-13 20:04:56,662 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=74.8 pTM=0.433 ipTM=0.12 tol=5.88 2024-07-13 20:05:03,449 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=74.7 pTM=0.424 ipTM=0.123 tol=5.23 2024-07-13 20:05:10,220 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=74.2 pTM=0.424 ipTM=0.124 tol=3.21 2024-07-13 20:05:17,026 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=73.1 pTM=0.42 ipTM=0.134 tol=11.1 2024-07-13 20:05:23,812 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=73.4 pTM=0.427 ipTM=0.116 tol=11.5 2024-07-13 20:05:30,611 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=74.9 pTM=0.422 ipTM=0.134 tol=9.34 2024-07-13 20:05:37,385 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=75.8 pTM=0.428 ipTM=0.124 tol=8.4 2024-07-13 20:05:44,152 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=76.4 pTM=0.431 ipTM=0.123 tol=2.16 2024-07-13 20:05:50,932 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=76.5 pTM=0.43 ipTM=0.127 tol=1.78 2024-07-13 20:05:57,724 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=77.3 pTM=0.429 ipTM=0.125 tol=4.38 2024-07-13 20:06:04,512 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=77 pTM=0.429 ipTM=0.128 tol=4.27 2024-07-13 20:06:11,329 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=77.6 pTM=0.428 ipTM=0.122 tol=8.52 2024-07-13 20:06:18,130 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=77.5 pTM=0.43 ipTM=0.12 tol=5.49 2024-07-13 20:06:24,940 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=77.9 pTM=0.428 ipTM=0.127 tol=4.42 2024-07-13 20:06:31,746 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=78.4 pTM=0.434 ipTM=0.122 tol=1.46 2024-07-13 20:06:38,553 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=78.3 pTM=0.439 ipTM=0.13 tol=0.876 2024-07-13 20:06:45,344 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=78.4 pTM=0.435 ipTM=0.128 tol=1.03 2024-07-13 20:06:52,132 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=78.3 pTM=0.438 ipTM=0.129 tol=0.849 2024-07-13 20:06:58,921 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=78.2 pTM=0.435 ipTM=0.126 tol=1.17 2024-07-13 20:07:05,717 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=78.6 pTM=0.439 ipTM=0.134 tol=1.27 2024-07-13 20:07:12,519 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=78.7 pTM=0.44 ipTM=0.127 tol=1.37 2024-07-13 20:07:19,316 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=78.7 pTM=0.439 ipTM=0.131 tol=1.52 2024-07-13 20:07:26,109 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=78.3 pTM=0.437 ipTM=0.135 tol=1.26 2024-07-13 20:07:32,902 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=78.5 pTM=0.439 ipTM=0.137 tol=1.28 2024-07-13 20:07:39,698 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=78.8 pTM=0.441 ipTM=0.131 tol=1.12 2024-07-13 20:07:46,499 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=78.7 pTM=0.444 ipTM=0.136 tol=1.57 2024-07-13 20:07:53,292 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=78.4 pTM=0.445 ipTM=0.142 tol=0.849 2024-07-13 20:08:00,091 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=78.5 pTM=0.447 ipTM=0.142 tol=1.52 2024-07-13 20:08:06,892 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=78.4 pTM=0.445 ipTM=0.142 tol=0.838 2024-07-13 20:08:06,893 alphafold2_multimer_v3_model_3_seed_000 took 210.6s (30 recycles) 2024-07-13 20:08:13,938 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=78.9 pTM=0.411 ipTM=0.105 2024-07-13 20:08:20,752 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=77.8 pTM=0.407 ipTM=0.106 tol=11.3 2024-07-13 20:08:27,574 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=77 pTM=0.41 ipTM=0.128 tol=11.2 2024-07-13 20:08:34,391 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=77.8 pTM=0.412 ipTM=0.13 tol=2.6 2024-07-13 20:08:41,203 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=77.6 pTM=0.41 ipTM=0.131 tol=3.18 2024-07-13 20:08:48,005 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=77.9 pTM=0.415 ipTM=0.123 tol=7.25 2024-07-13 20:08:54,821 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=78.1 pTM=0.413 ipTM=0.125 tol=4.05 2024-07-13 20:09:01,627 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=77.9 pTM=0.409 ipTM=0.134 tol=3.35 2024-07-13 20:09:08,432 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=78.1 pTM=0.414 ipTM=0.125 tol=5.4 2024-07-13 20:09:15,243 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=78.2 pTM=0.408 ipTM=0.126 tol=2.89 2024-07-13 20:09:22,055 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=77.9 pTM=0.408 ipTM=0.132 tol=3.78 2024-07-13 20:09:28,865 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=77.6 pTM=0.407 ipTM=0.13 tol=3.44 2024-07-13 20:09:35,680 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=77.8 pTM=0.41 ipTM=0.132 tol=4.43 2024-07-13 20:09:42,493 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=77.8 pTM=0.411 ipTM=0.131 tol=2.59 2024-07-13 20:09:49,310 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=77.9 pTM=0.414 ipTM=0.13 tol=1.25 2024-07-13 20:09:56,127 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=77.7 pTM=0.41 ipTM=0.136 tol=3.57 2024-07-13 20:10:02,943 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=78.1 pTM=0.412 ipTM=0.132 tol=4.2 2024-07-13 20:10:09,758 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=78.1 pTM=0.412 ipTM=0.133 tol=3.61 2024-07-13 20:10:16,582 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=78 pTM=0.413 ipTM=0.13 tol=3.83 2024-07-13 20:10:23,397 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=77.9 pTM=0.411 ipTM=0.136 tol=5.3 2024-07-13 20:10:30,212 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=77.9 pTM=0.41 ipTM=0.133 tol=3.72 2024-07-13 20:10:37,028 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=77.9 pTM=0.413 ipTM=0.132 tol=3.53 2024-07-13 20:10:43,845 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=77.8 pTM=0.41 ipTM=0.128 tol=4.64 2024-07-13 20:10:50,674 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=78.3 pTM=0.413 ipTM=0.125 tol=5.05 2024-07-13 20:10:57,516 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=77.8 pTM=0.41 ipTM=0.128 tol=4.12 2024-07-13 20:11:04,340 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=78.1 pTM=0.412 ipTM=0.136 tol=5.57 2024-07-13 20:11:11,164 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=77.7 pTM=0.415 ipTM=0.134 tol=5.89 2024-07-13 20:11:17,980 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=78.1 pTM=0.412 ipTM=0.124 tol=9.38 2024-07-13 20:11:24,799 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=78.1 pTM=0.412 ipTM=0.128 tol=5.46 2024-07-13 20:11:31,608 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=77.8 pTM=0.411 ipTM=0.126 tol=4.98 2024-07-13 20:11:38,433 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=77.7 pTM=0.411 ipTM=0.134 tol=2.03 2024-07-13 20:11:38,434 alphafold2_multimer_v3_model_4_seed_000 took 211.3s (30 recycles) 2024-07-13 20:11:45,446 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=76.3 pTM=0.434 ipTM=0.128 2024-07-13 20:11:52,251 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=78.6 pTM=0.44 ipTM=0.132 tol=24.6 2024-07-13 20:11:59,061 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=79.6 pTM=0.441 ipTM=0.113 tol=5.79 2024-07-13 20:12:05,885 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=80.1 pTM=0.442 ipTM=0.102 tol=3.45 2024-07-13 20:12:12,712 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=80.2 pTM=0.44 ipTM=0.103 tol=1.54 2024-07-13 20:12:19,533 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=80.1 pTM=0.448 ipTM=0.123 tol=3.87 2024-07-13 20:12:26,352 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=80.3 pTM=0.446 ipTM=0.116 tol=3.38 2024-07-13 20:12:33,172 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=80.1 pTM=0.448 ipTM=0.131 tol=3.1 2024-07-13 20:12:39,997 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=80.6 pTM=0.452 ipTM=0.126 tol=4.82 2024-07-13 20:12:46,821 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=80.6 pTM=0.453 ipTM=0.139 tol=1.67 2024-07-13 20:12:53,645 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=80.2 pTM=0.445 ipTM=0.127 tol=1.93 2024-07-13 20:13:00,463 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=80 pTM=0.45 ipTM=0.14 tol=2.71 2024-07-13 20:13:07,293 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=80.3 pTM=0.443 ipTM=0.111 tol=3.94 2024-07-13 20:13:14,146 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=80.1 pTM=0.451 ipTM=0.131 tol=3.31 2024-07-13 20:13:20,984 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=80.3 pTM=0.449 ipTM=0.117 tol=2.4 2024-07-13 20:13:27,806 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=80.4 pTM=0.447 ipTM=0.112 tol=3.36 2024-07-13 20:13:34,633 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=80.5 pTM=0.444 ipTM=0.109 tol=2.04 2024-07-13 20:13:41,455 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=80.3 pTM=0.439 ipTM=0.115 tol=6.39 2024-07-13 20:13:48,260 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=80.2 pTM=0.444 ipTM=0.118 tol=7.2 2024-07-13 20:13:55,072 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=80.3 pTM=0.453 ipTM=0.133 tol=4.28 2024-07-13 20:14:01,883 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=80.4 pTM=0.446 ipTM=0.122 tol=4.49 2024-07-13 20:14:08,696 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=80.6 pTM=0.444 ipTM=0.107 tol=5.32 2024-07-13 20:14:15,510 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=80.6 pTM=0.447 ipTM=0.117 tol=3.02 2024-07-13 20:14:22,330 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=80.6 pTM=0.448 ipTM=0.115 tol=2.18 2024-07-13 20:14:29,141 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=80.2 pTM=0.446 ipTM=0.121 tol=1.81 2024-07-13 20:14:35,964 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=80.4 pTM=0.445 ipTM=0.106 tol=3.59 2024-07-13 20:14:42,783 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=80.8 pTM=0.449 ipTM=0.114 tol=2.65 2024-07-13 20:14:49,600 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=80.2 pTM=0.451 ipTM=0.127 tol=3.36 2024-07-13 20:14:56,419 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=80.4 pTM=0.449 ipTM=0.122 tol=3.32 2024-07-13 20:15:03,234 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=80.2 pTM=0.455 ipTM=0.137 tol=3.01 2024-07-13 20:15:10,064 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=80.6 pTM=0.451 ipTM=0.126 tol=4.02 2024-07-13 20:15:10,065 alphafold2_multimer_v3_model_5_seed_000 took 211.4s (30 recycles) 2024-07-13 20:15:10,282 reranking models by 'multimer' metric 2024-07-13 20:15:14,937 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-13 20:15:33,289 Relaxation took 23.0s 2024-07-13 20:15:33,289 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=78.4 pTM=0.445 ipTM=0.142 2024-07-13 20:15:45,479 Relaxation took 12.2s 2024-07-13 20:15:45,479 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=80.6 pTM=0.451 ipTM=0.126 2024-07-13 20:16:23,875 Relaxation took 38.4s 2024-07-13 20:16:23,876 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=77.7 pTM=0.411 ipTM=0.134 2024-07-13 20:16:39,889 Relaxation took 16.0s 2024-07-13 20:16:39,890 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=80.4 pTM=0.427 ipTM=0.119 2024-07-13 20:16:53,457 Relaxation took 13.6s 2024-07-13 20:16:53,457 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=81.4 pTM=0.416 ipTM=0.114 2024-07-13 20:16:56,230 Done