2024-07-13 20:47:45,626 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 20:47:45,951 Running on GPU
2024-07-13 20:47:55,927 Found 6 citations for tools or databases
2024-07-13 20:47:55,927 Query 1/1: TVA41_RM04 (length 423)
2024-07-13 20:47:56,414 Sleeping for 10s. Reason: PENDING
2024-07-13 20:48:06,842 Sleeping for 7s. Reason: RUNNING
2024-07-13 20:48:14,270 Sleeping for 7s. Reason: RUNNING
2024-07-13 20:48:21,748 Sleeping for 8s. Reason: RUNNING
2024-07-13 20:48:30,187 Sleeping for 10s. Reason: RUNNING
2024-07-13 20:48:40,611 Sleeping for 5s. Reason: RUNNING
2024-07-13 20:48:46,050 Sleeping for 6s. Reason: RUNNING
2024-07-13 20:48:54,094 Sleeping for 10s. Reason: PENDING
2024-07-13 20:49:04,515 Sleeping for 9s. Reason: RUNNING
2024-07-13 20:49:13,931 Sleeping for 10s. Reason: RUNNING
2024-07-13 20:49:26,116 Setting max_seq=508, max_extra_seq=2048
2024-07-13 20:52:36,553 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=71.8 pTM=0.601 ipTM=0.526
2024-07-13 20:52:40,717 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=69.5 pTM=0.515 ipTM=0.149 tol=9.24
2024-07-13 20:52:44,886 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=68.6 pTM=0.51 ipTM=0.135 tol=4.25
2024-07-13 20:52:49,041 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=68.7 pTM=0.507 ipTM=0.112 tol=4.54
2024-07-13 20:52:53,198 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=68.5 pTM=0.508 ipTM=0.128 tol=4.03
2024-07-13 20:52:57,352 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=69.1 pTM=0.511 ipTM=0.125 tol=3.27
2024-07-13 20:53:01,515 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=69.5 pTM=0.514 ipTM=0.136 tol=1.26
2024-07-13 20:53:05,687 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=69.6 pTM=0.516 ipTM=0.135 tol=2.54
2024-07-13 20:53:09,848 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=69.2 pTM=0.512 ipTM=0.138 tol=2.86
2024-07-13 20:53:14,003 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=69.1 pTM=0.511 ipTM=0.13 tol=3.99
2024-07-13 20:53:18,162 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=69.1 pTM=0.509 ipTM=0.13 tol=3.3
2024-07-13 20:53:22,316 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=69.2 pTM=0.511 ipTM=0.126 tol=13.8
2024-07-13 20:53:26,472 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=69.4 pTM=0.513 ipTM=0.143 tol=6.71
2024-07-13 20:53:30,623 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=69.2 pTM=0.51 ipTM=0.163 tol=3.82
2024-07-13 20:53:34,778 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=69.6 pTM=0.516 ipTM=0.151 tol=4.32
2024-07-13 20:53:38,932 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=69.4 pTM=0.517 ipTM=0.297 tol=1.83
2024-07-13 20:53:43,091 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=69.4 pTM=0.514 ipTM=0.323 tol=1.89
2024-07-13 20:53:47,248 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=69.5 pTM=0.517 ipTM=0.264 tol=1.45
2024-07-13 20:53:51,404 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=69.5 pTM=0.513 ipTM=0.302 tol=0.732
2024-07-13 20:53:55,557 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=69.2 pTM=0.513 ipTM=0.293 tol=2.61
2024-07-13 20:53:59,710 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=69.5 pTM=0.512 ipTM=0.257 tol=3.85
2024-07-13 20:54:03,859 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=69.4 pTM=0.512 ipTM=0.261 tol=1.37
2024-07-13 20:54:08,022 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=69.8 pTM=0.514 ipTM=0.308 tol=3.62
2024-07-13 20:54:12,179 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=69.5 pTM=0.516 ipTM=0.268 tol=2.61
2024-07-13 20:54:16,334 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=69.5 pTM=0.514 ipTM=0.241 tol=2.84
2024-07-13 20:54:20,487 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=69.4 pTM=0.518 ipTM=0.214 tol=3.23
2024-07-13 20:54:24,647 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=69.4 pTM=0.514 ipTM=0.286 tol=5.35
2024-07-13 20:54:28,801 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=69.8 pTM=0.516 ipTM=0.326 tol=2.4
2024-07-13 20:54:32,966 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=70.1 pTM=0.52 ipTM=0.322 tol=6.79
2024-07-13 20:54:37,120 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=69.4 pTM=0.513 ipTM=0.281 tol=1.29
2024-07-13 20:54:41,274 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=69.7 pTM=0.517 ipTM=0.321 tol=0.775
2024-07-13 20:54:41,275 alphafold2_multimer_v3_model_1_seed_000 took 284.3s (30 recycles)
2024-07-13 20:54:45,572 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=68.5 pTM=0.505 ipTM=0.115
2024-07-13 20:54:49,740 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=70.9 pTM=0.508 ipTM=0.0983 tol=6.98
2024-07-13 20:54:53,910 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=71.1 pTM=0.51 ipTM=0.0955 tol=7.4
2024-07-13 20:54:58,074 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=71.2 pTM=0.508 ipTM=0.0925 tol=6.45
2024-07-13 20:55:02,245 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=70.7 pTM=0.506 ipTM=0.0932 tol=4.66
2024-07-13 20:55:06,410 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=70.9 pTM=0.506 ipTM=0.0903 tol=3.22
2024-07-13 20:55:10,578 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=71.8 pTM=0.509 ipTM=0.0898 tol=4.39
2024-07-13 20:55:14,741 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=71.7 pTM=0.509 ipTM=0.0881 tol=3.72
2024-07-13 20:55:18,906 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=71.3 pTM=0.507 ipTM=0.0876 tol=3.29
2024-07-13 20:55:23,078 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=71.2 pTM=0.508 ipTM=0.0878 tol=2.25
2024-07-13 20:55:27,252 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=70.8 pTM=0.504 ipTM=0.0911 tol=5.71
2024-07-13 20:55:31,422 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=70.9 pTM=0.506 ipTM=0.0949 tol=8.15
2024-07-13 20:55:35,590 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=71.3 pTM=0.507 ipTM=0.102 tol=4.12
2024-07-13 20:55:39,753 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=71.3 pTM=0.508 ipTM=0.0864 tol=4.49
2024-07-13 20:55:43,916 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=71.2 pTM=0.509 ipTM=0.088 tol=1.98
2024-07-13 20:55:48,084 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=70.4 pTM=0.505 ipTM=0.113 tol=3.4
2024-07-13 20:55:52,250 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=70.4 pTM=0.505 ipTM=0.12 tol=2.71
2024-07-13 20:55:56,415 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=71.1 pTM=0.508 ipTM=0.129 tol=4.55
2024-07-13 20:56:00,579 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=70.8 pTM=0.505 ipTM=0.109 tol=2.56
2024-07-13 20:56:04,743 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=70.5 pTM=0.505 ipTM=0.0906 tol=4.19
2024-07-13 20:56:08,914 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=70.8 pTM=0.507 ipTM=0.0908 tol=3.71
2024-07-13 20:56:13,083 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=71.4 pTM=0.509 ipTM=0.0883 tol=3.96
2024-07-13 20:56:17,261 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=71.2 pTM=0.509 ipTM=0.09 tol=3.33
2024-07-13 20:56:21,443 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=71.2 pTM=0.511 ipTM=0.0939 tol=6.88
2024-07-13 20:56:25,619 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=71.2 pTM=0.512 ipTM=0.0922 tol=1.62
2024-07-13 20:56:29,792 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=71.2 pTM=0.511 ipTM=0.0935 tol=6.63
2024-07-13 20:56:33,965 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=71.6 pTM=0.512 ipTM=0.0906 tol=3.49
2024-07-13 20:56:38,135 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=71.8 pTM=0.514 ipTM=0.0916 tol=2.56
2024-07-13 20:56:42,316 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=71.2 pTM=0.509 ipTM=0.0879 tol=6.12
2024-07-13 20:56:46,492 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=71.2 pTM=0.508 ipTM=0.0884 tol=2.45
2024-07-13 20:56:50,658 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=71.1 pTM=0.509 ipTM=0.0909 tol=8.29
2024-07-13 20:56:50,659 alphafold2_multimer_v3_model_2_seed_000 took 129.3s (30 recycles)
2024-07-13 20:56:54,954 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=68.1 pTM=0.491 ipTM=0.109
2024-07-13 20:56:59,116 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=69.4 pTM=0.494 ipTM=0.0959 tol=6.5
2024-07-13 20:57:03,272 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=69.2 pTM=0.5 ipTM=0.149 tol=13
2024-07-13 20:57:07,422 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=70 pTM=0.503 ipTM=0.277 tol=3.3
2024-07-13 20:57:11,578 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=70.1 pTM=0.506 ipTM=0.141 tol=3.01
2024-07-13 20:57:15,729 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=70.4 pTM=0.505 ipTM=0.269 tol=3.44
2024-07-13 20:57:19,882 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=70.9 pTM=0.51 ipTM=0.37 tol=1.77
2024-07-13 20:57:24,033 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=71.2 pTM=0.509 ipTM=0.296 tol=1.6
2024-07-13 20:57:28,186 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=71.1 pTM=0.511 ipTM=0.364 tol=1.54
2024-07-13 20:57:32,343 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=70.9 pTM=0.51 ipTM=0.352 tol=1.55
2024-07-13 20:57:36,493 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=70.4 pTM=0.507 ipTM=0.323 tol=1.89
2024-07-13 20:57:40,647 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=70.8 pTM=0.511 ipTM=0.342 tol=2.32
2024-07-13 20:57:44,800 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=70.8 pTM=0.509 ipTM=0.34 tol=1.3
2024-07-13 20:57:48,956 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=71 pTM=0.511 ipTM=0.357 tol=1.22
2024-07-13 20:57:53,114 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=70.8 pTM=0.508 ipTM=0.309 tol=1.32
2024-07-13 20:57:57,262 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=70.4 pTM=0.509 ipTM=0.366 tol=1.74
2024-07-13 20:58:01,418 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=70.1 pTM=0.509 ipTM=0.353 tol=2.09
2024-07-13 20:58:05,574 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=70.9 pTM=0.51 ipTM=0.352 tol=1
2024-07-13 20:58:09,728 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=70.6 pTM=0.51 ipTM=0.334 tol=1.07
2024-07-13 20:58:13,880 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=70.6 pTM=0.507 ipTM=0.333 tol=1.32
2024-07-13 20:58:18,036 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=70.8 pTM=0.51 ipTM=0.31 tol=0.761
2024-07-13 20:58:22,191 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=71.3 pTM=0.509 ipTM=0.333 tol=1.75
2024-07-13 20:58:26,346 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=71.1 pTM=0.513 ipTM=0.35 tol=1.76
2024-07-13 20:58:30,500 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=70.8 pTM=0.512 ipTM=0.367 tol=1.22
2024-07-13 20:58:34,660 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=70.7 pTM=0.51 ipTM=0.336 tol=1.11
2024-07-13 20:58:38,810 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=71 pTM=0.513 ipTM=0.375 tol=0.754
2024-07-13 20:58:42,968 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=70.8 pTM=0.512 ipTM=0.341 tol=2.12
2024-07-13 20:58:47,118 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=71.1 pTM=0.509 ipTM=0.354 tol=2.1
2024-07-13 20:58:51,279 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=70.9 pTM=0.512 ipTM=0.363 tol=1.54
2024-07-13 20:58:55,430 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=70.9 pTM=0.508 ipTM=0.347 tol=1.36
2024-07-13 20:58:59,590 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=70.9 pTM=0.512 ipTM=0.314 tol=1.17
2024-07-13 20:58:59,591 alphafold2_multimer_v3_model_3_seed_000 took 128.8s (30 recycles)
2024-07-13 20:59:03,874 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=64.2 pTM=0.483 ipTM=0.109
2024-07-13 20:59:08,031 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=67.1 pTM=0.494 ipTM=0.106 tol=7.59
2024-07-13 20:59:12,188 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=67.9 pTM=0.503 ipTM=0.11 tol=4.85
2024-07-13 20:59:16,344 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=67.8 pTM=0.498 ipTM=0.105 tol=5.57
2024-07-13 20:59:20,500 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=68.2 pTM=0.504 ipTM=0.104 tol=4.23
2024-07-13 20:59:24,656 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=68.6 pTM=0.505 ipTM=0.105 tol=4.13
2024-07-13 20:59:28,809 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=68.4 pTM=0.511 ipTM=0.11 tol=1.96
2024-07-13 20:59:32,962 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=68.3 pTM=0.508 ipTM=0.11 tol=1.47
2024-07-13 20:59:37,122 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=68.3 pTM=0.507 ipTM=0.113 tol=7.39
2024-07-13 20:59:41,283 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=68.7 pTM=0.51 ipTM=0.111 tol=5.81
2024-07-13 20:59:45,450 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=68.2 pTM=0.505 ipTM=0.109 tol=2.42
2024-07-13 20:59:49,616 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=68.9 pTM=0.509 ipTM=0.113 tol=1.75
2024-07-13 20:59:53,779 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=68.5 pTM=0.508 ipTM=0.115 tol=4.84
2024-07-13 20:59:57,944 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=68.9 pTM=0.513 ipTM=0.115 tol=3.86
2024-07-13 21:00:02,104 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=68.6 pTM=0.508 ipTM=0.111 tol=3.62
2024-07-13 21:00:06,265 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=68.4 pTM=0.507 ipTM=0.113 tol=4.22
2024-07-13 21:00:10,426 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=68.4 pTM=0.505 ipTM=0.112 tol=4.7
2024-07-13 21:00:14,586 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=68.5 pTM=0.506 ipTM=0.112 tol=3.38
2024-07-13 21:00:18,750 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=68.7 pTM=0.511 ipTM=0.117 tol=4.19
2024-07-13 21:00:22,909 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=68.4 pTM=0.508 ipTM=0.11 tol=4.9
2024-07-13 21:00:27,065 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=68.2 pTM=0.503 ipTM=0.107 tol=4.72
2024-07-13 21:00:31,225 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=69.1 pTM=0.507 ipTM=0.103 tol=4.46
2024-07-13 21:00:35,392 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=69.2 pTM=0.508 ipTM=0.11 tol=5.55
2024-07-13 21:00:39,556 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=68.5 pTM=0.507 ipTM=0.112 tol=4.87
2024-07-13 21:00:43,723 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=69.1 pTM=0.509 ipTM=0.113 tol=8.41
2024-07-13 21:00:47,884 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=68.9 pTM=0.507 ipTM=0.108 tol=2.91
2024-07-13 21:00:52,048 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=69.1 pTM=0.507 ipTM=0.111 tol=6.52
2024-07-13 21:00:56,210 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=69.2 pTM=0.507 ipTM=0.109 tol=5.15
2024-07-13 21:01:00,374 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=69.2 pTM=0.508 ipTM=0.112 tol=3.44
2024-07-13 21:01:04,540 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=68.4 pTM=0.505 ipTM=0.11 tol=3.71
2024-07-13 21:01:08,699 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=69.2 pTM=0.508 ipTM=0.108 tol=4.32
2024-07-13 21:01:08,700 alphafold2_multimer_v3_model_4_seed_000 took 129.0s (30 recycles)
2024-07-13 21:01:13,001 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=66 pTM=0.494 ipTM=0.133
2024-07-13 21:01:17,169 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=67.5 pTM=0.489 ipTM=0.0961 tol=9.55
2024-07-13 21:01:21,337 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=66.8 pTM=0.482 ipTM=0.0938 tol=17.7
2024-07-13 21:01:25,505 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=66.6 pTM=0.476 ipTM=0.0943 tol=6.1
2024-07-13 21:01:29,678 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67.3 pTM=0.479 ipTM=0.0938 tol=7.25
2024-07-13 21:01:33,846 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=68 pTM=0.482 ipTM=0.0905 tol=3.75
2024-07-13 21:01:38,003 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=68.8 pTM=0.494 ipTM=0.0901 tol=11.3
2024-07-13 21:01:42,161 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=68.5 pTM=0.494 ipTM=0.0896 tol=1.5
2024-07-13 21:01:46,326 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=68 pTM=0.491 ipTM=0.0944 tol=7.34
2024-07-13 21:01:50,491 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=68.7 pTM=0.494 ipTM=0.0922 tol=5.76
2024-07-13 21:01:54,657 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=68.1 pTM=0.489 ipTM=0.0941 tol=4.37
2024-07-13 21:01:58,821 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.9 pTM=0.491 ipTM=0.0959 tol=6.6
2024-07-13 21:02:02,981 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.9 pTM=0.49 ipTM=0.0949 tol=4.09
2024-07-13 21:02:07,150 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=67.9 pTM=0.489 ipTM=0.098 tol=10.1
2024-07-13 21:02:11,308 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=67.9 pTM=0.489 ipTM=0.0974 tol=4.07
2024-07-13 21:02:15,473 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.6 pTM=0.488 ipTM=0.104 tol=9.52
2024-07-13 21:02:19,646 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=66.8 pTM=0.479 ipTM=0.107 tol=3.27
2024-07-13 21:02:23,804 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=67.5 pTM=0.484 ipTM=0.101 tol=6.25
2024-07-13 21:02:27,967 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=67.4 pTM=0.485 ipTM=0.102 tol=2.72
2024-07-13 21:02:32,120 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=67 pTM=0.486 ipTM=0.101 tol=6.91
2024-07-13 21:02:36,275 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=67.6 pTM=0.488 ipTM=0.1 tol=2.78
2024-07-13 21:02:40,437 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=68.2 pTM=0.492 ipTM=0.0974 tol=6.86
2024-07-13 21:02:44,604 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=67.9 pTM=0.49 ipTM=0.101 tol=3.26
2024-07-13 21:02:48,774 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=68.1 pTM=0.498 ipTM=0.101 tol=6.82
2024-07-13 21:02:52,927 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=68.2 pTM=0.498 ipTM=0.0985 tol=13.7
2024-07-13 21:02:57,078 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=68.5 pTM=0.499 ipTM=0.0952 tol=4.98
2024-07-13 21:03:01,234 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=69.1 pTM=0.502 ipTM=0.0925 tol=3.69
2024-07-13 21:03:05,386 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=68.5 pTM=0.496 ipTM=0.0933 tol=2.93
2024-07-13 21:03:09,551 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68 pTM=0.49 ipTM=0.0964 tol=12.6
2024-07-13 21:03:13,713 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=67.8 pTM=0.487 ipTM=0.101 tol=2.82
2024-07-13 21:03:17,874 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67.9 pTM=0.49 ipTM=0.102 tol=6.21
2024-07-13 21:03:17,874 alphafold2_multimer_v3_model_5_seed_000 took 129.0s (30 recycles)
2024-07-13 21:03:18,004 reranking models by 'multimer' metric
2024-07-13 21:03:33,641 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-13 21:03:51,468 Relaxation took 33.5s
2024-07-13 21:03:51,468 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=69.7 pTM=0.517 ipTM=0.321
2024-07-13 21:04:19,943 Relaxation took 28.5s
2024-07-13 21:04:19,943 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=70.9 pTM=0.512 ipTM=0.314
2024-07-13 21:04:40,966 Relaxation took 21.0s
2024-07-13 21:04:40,967 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=69.2 pTM=0.508 ipTM=0.108
2024-07-13 21:05:07,323 Relaxation took 26.4s
2024-07-13 21:05:07,324 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67.9 pTM=0.49 ipTM=0.102
2024-07-13 21:05:24,110 Relaxation took 16.8s
2024-07-13 21:05:24,110 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=71.1 pTM=0.509 ipTM=0.0909
2024-07-13 21:05:25,160 Done