2024-07-13 21:34:49,209 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-13 21:34:49,534 Running on GPU 2024-07-13 21:35:00,186 Found 6 citations for tools or databases 2024-07-13 21:35:00,186 Query 1/1: TYW1B_ACS2A (length 1245) 2024-07-13 21:35:00,656 Sleeping for 7s. Reason: PENDING 2024-07-13 21:35:08,081 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:35:18,503 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:35:28,955 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:35:38,388 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:35:47,827 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:35:58,301 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:36:07,724 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:36:13,154 Sleeping for 8s. Reason: RUNNING 2024-07-13 21:36:21,583 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:36:28,015 Sleeping for 8s. Reason: RUNNING 2024-07-13 21:36:36,449 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:36:42,868 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:36:49,280 Sleeping for 8s. Reason: RUNNING 2024-07-13 21:36:57,703 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:37:07,140 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:37:13,564 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:37:20,008 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:37:26,448 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:37:32,863 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:37:38,295 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:37:48,733 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:37:55,146 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:38:02,556 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:38:09,975 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:38:17,413 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:38:27,837 Sleeping for 8s. Reason: RUNNING 2024-07-13 21:38:36,255 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:38:43,679 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:38:53,104 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:39:03,540 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:39:12,996 Sleeping for 8s. Reason: RUNNING 2024-07-13 21:39:24,809 Sleeping for 8s. Reason: PENDING 2024-07-13 21:39:33,216 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:39:40,640 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:39:46,061 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:39:55,488 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:40:04,897 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:40:11,332 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:40:21,753 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:40:31,168 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:40:40,588 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:40:48,014 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:40:58,438 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:41:04,895 Sleeping for 8s. Reason: RUNNING 2024-07-13 21:41:13,312 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:41:23,769 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:41:34,192 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:41:39,616 Sleeping for 8s. Reason: RUNNING 2024-07-13 21:41:48,044 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:41:58,481 Sleeping for 8s. Reason: RUNNING 2024-07-13 21:42:06,914 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:42:14,373 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:42:20,786 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:42:28,220 Sleeping for 8s. Reason: RUNNING 2024-07-13 21:42:36,637 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:42:43,049 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:42:52,470 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:42:59,882 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:43:10,306 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:43:20,781 Sleeping for 8s. Reason: RUNNING 2024-07-13 21:43:29,200 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:43:35,629 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:43:42,062 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:43:52,534 Sleeping for 8s. Reason: RUNNING 2024-07-13 21:44:00,969 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:44:08,893 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:44:19,310 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:44:25,749 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:44:40,335 Setting max_seq=508, max_extra_seq=2048 2024-07-13 21:48:05,069 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=71.8 pTM=0.452 ipTM=0.155 2024-07-13 21:48:43,655 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=72.9 pTM=0.472 ipTM=0.17 tol=9.77 2024-07-13 21:49:22,469 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=72.3 pTM=0.466 ipTM=0.167 tol=4.5 2024-07-13 21:50:01,417 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=73.4 pTM=0.481 ipTM=0.268 tol=8.46 2024-07-13 21:50:40,476 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=72.5 pTM=0.464 ipTM=0.177 tol=5.18 2024-07-13 21:51:19,565 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=72.4 pTM=0.466 ipTM=0.175 tol=5.54 2024-07-13 21:51:58,672 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=72.6 pTM=0.468 ipTM=0.187 tol=3.15 2024-07-13 21:52:37,812 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=73.1 pTM=0.469 ipTM=0.199 tol=4.39 2024-07-13 21:53:16,945 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=72.8 pTM=0.464 ipTM=0.178 tol=3.96 2024-07-13 21:53:56,100 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=72.7 pTM=0.468 ipTM=0.182 tol=3.25 2024-07-13 21:54:35,257 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=72.5 pTM=0.465 ipTM=0.171 tol=3.59 2024-07-13 21:55:14,403 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=72.9 pTM=0.467 ipTM=0.17 tol=3.03 2024-07-13 21:55:53,497 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=72.8 pTM=0.465 ipTM=0.169 tol=2.99 2024-07-13 21:56:32,550 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=72.6 pTM=0.466 ipTM=0.169 tol=3.08 2024-07-13 21:57:11,573 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=73.1 pTM=0.47 ipTM=0.191 tol=3.47 2024-07-13 21:57:50,624 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=73.2 pTM=0.465 ipTM=0.174 tol=4.03 2024-07-13 21:58:29,681 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=72.7 pTM=0.465 ipTM=0.168 tol=3.41 2024-07-13 21:59:08,705 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=72.7 pTM=0.468 ipTM=0.17 tol=3.11 2024-07-13 21:59:47,706 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=72.9 pTM=0.471 ipTM=0.208 tol=4.34 2024-07-13 22:00:26,714 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=73.2 pTM=0.465 ipTM=0.18 tol=3.12 2024-07-13 22:01:05,751 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=72.7 pTM=0.465 ipTM=0.173 tol=2.36 2024-07-13 22:01:44,761 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=72.5 pTM=0.467 ipTM=0.171 tol=2.91 2024-07-13 22:02:23,758 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=72.8 pTM=0.466 ipTM=0.188 tol=4.96 2024-07-13 22:03:02,733 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=73.3 pTM=0.47 ipTM=0.207 tol=3.1 2024-07-13 22:03:41,716 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=72.9 pTM=0.468 ipTM=0.204 tol=1.66 2024-07-13 22:04:20,702 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=72.7 pTM=0.467 ipTM=0.181 tol=1.96 2024-07-13 22:04:59,698 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=72.2 pTM=0.464 ipTM=0.166 tol=3.32 2024-07-13 22:05:38,667 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=72.1 pTM=0.468 ipTM=0.191 tol=3.14 2024-07-13 22:06:17,641 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=71.9 pTM=0.466 ipTM=0.177 tol=3.05 2024-07-13 22:06:56,653 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=72.6 pTM=0.466 ipTM=0.17 tol=2.42 2024-07-13 22:07:35,664 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=72.3 pTM=0.465 ipTM=0.167 tol=3.71 2024-07-13 22:07:35,665 alphafold2_multimer_v3_model_1_seed_000 took 1371.8s (30 recycles) 2024-07-13 22:08:15,560 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=71.4 pTM=0.446 ipTM=0.158 2024-07-13 22:08:54,601 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=73.5 pTM=0.478 ipTM=0.16 tol=15.7 2024-07-13 22:09:33,649 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=73.4 pTM=0.458 ipTM=0.168 tol=5.23 2024-07-13 22:10:12,700 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=73.6 pTM=0.446 ipTM=0.156 tol=5.74 2024-07-13 22:10:51,750 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=73.1 pTM=0.443 ipTM=0.159 tol=4.14 2024-07-13 22:11:30,795 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=73.1 pTM=0.445 ipTM=0.159 tol=5.84 2024-07-13 22:12:09,837 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=73.3 pTM=0.445 ipTM=0.157 tol=5.09 2024-07-13 22:12:48,939 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=73.4 pTM=0.445 ipTM=0.158 tol=3.27 2024-07-13 22:13:27,898 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=73.4 pTM=0.445 ipTM=0.155 tol=8.38 2024-07-13 22:14:06,948 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=73.5 pTM=0.447 ipTM=0.157 tol=3.6 2024-07-13 22:14:46,021 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=73.6 pTM=0.446 ipTM=0.158 tol=3.96 2024-07-13 22:15:25,112 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=73.5 pTM=0.446 ipTM=0.16 tol=2.96 2024-07-13 22:16:04,214 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=73.6 pTM=0.445 ipTM=0.159 tol=7.18 2024-07-13 22:16:43,303 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=73.8 pTM=0.446 ipTM=0.159 tol=4.8 2024-07-13 22:17:22,397 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=73.6 pTM=0.446 ipTM=0.16 tol=2.36 2024-07-13 22:18:01,479 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=73.6 pTM=0.447 ipTM=0.159 tol=7.8 2024-07-13 22:18:40,570 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=73.6 pTM=0.447 ipTM=0.168 tol=1.91 2024-07-13 22:19:19,710 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=73.5 pTM=0.448 ipTM=0.183 tol=2.04 2024-07-13 22:19:58,905 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=73.2 pTM=0.446 ipTM=0.157 tol=2.63 2024-07-13 22:20:38,095 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=73.5 pTM=0.446 ipTM=0.16 tol=2.51 2024-07-13 22:21:17,314 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=73.2 pTM=0.445 ipTM=0.157 tol=1.79 2024-07-13 22:21:56,532 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=73.6 pTM=0.445 ipTM=0.16 tol=1.03 2024-07-13 22:22:35,757 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=73.5 pTM=0.446 ipTM=0.16 tol=1.42 2024-07-13 22:23:14,952 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=73.5 pTM=0.445 ipTM=0.158 tol=0.932 2024-07-13 22:23:54,125 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=73.2 pTM=0.446 ipTM=0.158 tol=0.944 2024-07-13 22:24:33,296 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=73.4 pTM=0.446 ipTM=0.157 tol=1.21 2024-07-13 22:25:12,482 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=73.3 pTM=0.445 ipTM=0.156 tol=1.52 2024-07-13 22:25:51,694 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=73.2 pTM=0.445 ipTM=0.156 tol=1.07 2024-07-13 22:26:30,909 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=73.4 pTM=0.445 ipTM=0.162 tol=1.72 2024-07-13 22:27:10,117 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=73.3 pTM=0.445 ipTM=0.158 tol=1.59 2024-07-13 22:27:49,334 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=73.1 pTM=0.444 ipTM=0.158 tol=1.29 2024-07-13 22:27:49,336 alphafold2_multimer_v3_model_2_seed_000 took 1212.7s (30 recycles) 2024-07-13 22:28:29,425 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=74.2 pTM=0.45 ipTM=0.168 2024-07-13 22:29:08,699 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=73.6 pTM=0.46 ipTM=0.182 tol=11.4 2024-07-13 22:29:47,977 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=73.4 pTM=0.464 ipTM=0.169 tol=8.12 2024-07-13 22:30:27,219 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=73.4 pTM=0.465 ipTM=0.167 tol=4.7 2024-07-13 22:31:06,440 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=73.7 pTM=0.47 ipTM=0.166 tol=2.96 2024-07-13 22:31:45,642 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=73.8 pTM=0.468 ipTM=0.166 tol=1.96 2024-07-13 22:32:24,848 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=73.8 pTM=0.47 ipTM=0.164 tol=1.91 2024-07-13 22:33:04,051 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=73.9 pTM=0.47 ipTM=0.165 tol=1.86 2024-07-13 22:33:43,233 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=73.6 pTM=0.474 ipTM=0.165 tol=2.75 2024-07-13 22:34:22,406 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=73.8 pTM=0.474 ipTM=0.165 tol=2.53 2024-07-13 22:35:01,565 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=73.7 pTM=0.477 ipTM=0.165 tol=2.14 2024-07-13 22:35:40,701 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=73.8 pTM=0.477 ipTM=0.166 tol=2.77 2024-07-13 22:36:19,849 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=73.8 pTM=0.48 ipTM=0.166 tol=2.58 2024-07-13 22:36:59,012 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=73.8 pTM=0.477 ipTM=0.165 tol=3.23 2024-07-13 22:37:38,171 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=73.7 pTM=0.484 ipTM=0.17 tol=2.26 2024-07-13 22:38:17,321 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=73.9 pTM=0.479 ipTM=0.167 tol=3.15 2024-07-13 22:38:56,495 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=73.9 pTM=0.484 ipTM=0.171 tol=2.73 2024-07-13 22:39:35,697 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=73.6 pTM=0.477 ipTM=0.166 tol=2.44 2024-07-13 22:40:14,858 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=74.1 pTM=0.485 ipTM=0.174 tol=2.33 2024-07-13 22:40:53,978 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=73.6 pTM=0.479 ipTM=0.171 tol=1.85 2024-07-13 22:41:33,115 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=73.7 pTM=0.485 ipTM=0.174 tol=3.13 2024-07-13 22:42:12,250 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=73.6 pTM=0.478 ipTM=0.167 tol=2.66 2024-07-13 22:42:51,432 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=73.7 pTM=0.485 ipTM=0.174 tol=2.71 2024-07-13 22:43:30,658 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=73.5 pTM=0.481 ipTM=0.172 tol=2.41 2024-07-13 22:44:09,905 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=73.8 pTM=0.488 ipTM=0.179 tol=2.22 2024-07-13 22:44:49,157 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=73.7 pTM=0.483 ipTM=0.174 tol=2.03 2024-07-13 22:45:28,374 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=73.7 pTM=0.488 ipTM=0.177 tol=1.57 2024-07-13 22:46:07,576 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=73.6 pTM=0.481 ipTM=0.17 tol=1.62 2024-07-13 22:46:46,794 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=73.6 pTM=0.488 ipTM=0.179 tol=2.12 2024-07-13 22:47:25,989 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=73.5 pTM=0.482 ipTM=0.173 tol=1.94 2024-07-13 22:48:05,196 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=73.9 pTM=0.486 ipTM=0.175 tol=1.41 2024-07-13 22:48:05,198 alphafold2_multimer_v3_model_3_seed_000 took 1214.9s (30 recycles) 2024-07-13 22:48:45,231 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=71.9 pTM=0.444 ipTM=0.168 2024-07-13 22:49:24,446 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=73.1 pTM=0.48 ipTM=0.169 tol=11.1 2024-07-13 22:50:03,688 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=72 pTM=0.443 ipTM=0.166 tol=6.86 2024-07-13 22:50:42,874 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=72.3 pTM=0.442 ipTM=0.18 tol=7.32 2024-07-13 22:51:22,036 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=72.5 pTM=0.448 ipTM=0.167 tol=7.71 2024-07-13 22:52:01,175 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=71.8 pTM=0.458 ipTM=0.177 tol=9.31 2024-07-13 22:52:40,302 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=72.4 pTM=0.474 ipTM=0.177 tol=5.45 2024-07-13 22:53:19,426 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=72.5 pTM=0.479 ipTM=0.184 tol=3.38 2024-07-13 22:53:58,526 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=72.2 pTM=0.475 ipTM=0.183 tol=5.01 2024-07-13 22:54:37,634 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=71.6 pTM=0.468 ipTM=0.182 tol=1.89 2024-07-13 22:55:16,717 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=72.9 pTM=0.492 ipTM=0.184 tol=5.44 2024-07-13 22:55:55,816 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=72.6 pTM=0.487 ipTM=0.196 tol=4.24 2024-07-13 22:56:34,873 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=72.2 pTM=0.48 ipTM=0.194 tol=5.18 2024-07-13 22:57:13,988 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=72.1 pTM=0.471 ipTM=0.188 tol=2.07 2024-07-13 22:57:53,047 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=72.9 pTM=0.49 ipTM=0.188 tol=4.83 2024-07-13 22:58:32,085 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=72.6 pTM=0.487 ipTM=0.198 tol=1.97 2024-07-13 22:59:11,074 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=72 pTM=0.475 ipTM=0.187 tol=5.77 2024-07-13 22:59:50,081 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=71.6 pTM=0.478 ipTM=0.197 tol=3.44 2024-07-13 23:00:29,133 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=72 pTM=0.491 ipTM=0.199 tol=5.33 2024-07-13 23:01:08,236 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=72.2 pTM=0.486 ipTM=0.195 tol=4.64 2024-07-13 23:01:47,324 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=71.9 pTM=0.481 ipTM=0.193 tol=5.32 2024-07-13 23:02:26,434 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=71.6 pTM=0.479 ipTM=0.199 tol=2.37 2024-07-13 23:03:05,535 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=72.2 pTM=0.488 ipTM=0.191 tol=5.74 2024-07-13 23:03:44,677 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=72.2 pTM=0.494 ipTM=0.205 tol=4.04 2024-07-13 23:04:23,751 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=71.9 pTM=0.486 ipTM=0.199 tol=6.13 2024-07-13 23:05:02,844 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=71.4 pTM=0.481 ipTM=0.2 tol=2.3 2024-07-13 23:05:41,943 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=72.2 pTM=0.49 ipTM=0.191 tol=5.28 2024-07-13 23:06:21,044 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=71.9 pTM=0.489 ipTM=0.199 tol=3.34 2024-07-13 23:07:00,100 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=71.9 pTM=0.484 ipTM=0.199 tol=5.57 2024-07-13 23:07:39,178 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=71.8 pTM=0.479 ipTM=0.198 tol=3.13 2024-07-13 23:08:18,243 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=71.9 pTM=0.485 ipTM=0.192 tol=5.77 2024-07-13 23:08:18,244 alphafold2_multimer_v3_model_4_seed_000 took 1212.1s (30 recycles) 2024-07-13 23:08:58,228 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=71.2 pTM=0.446 ipTM=0.162 2024-07-13 23:09:37,360 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=72.4 pTM=0.457 ipTM=0.162 tol=8.22 2024-07-13 23:10:16,494 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=72.3 pTM=0.446 ipTM=0.157 tol=7.57 2024-07-13 23:10:55,588 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=72.8 pTM=0.455 ipTM=0.157 tol=5.37 2024-07-13 23:11:34,684 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=72.4 pTM=0.459 ipTM=0.166 tol=9.2 2024-07-13 23:12:13,806 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=72.6 pTM=0.459 ipTM=0.163 tol=5.57 2024-07-13 23:12:52,934 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=72.9 pTM=0.463 ipTM=0.166 tol=3.02 2024-07-13 23:13:32,032 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=73.4 pTM=0.462 ipTM=0.167 tol=3.6 2024-07-13 23:14:11,134 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=72.6 pTM=0.464 ipTM=0.167 tol=2.16 2024-07-13 23:14:50,140 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=72.9 pTM=0.464 ipTM=0.168 tol=4.03 2024-07-13 23:15:29,307 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=72.8 pTM=0.465 ipTM=0.167 tol=3.33 2024-07-13 23:16:08,442 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=73.3 pTM=0.463 ipTM=0.167 tol=3.54 2024-07-13 23:16:47,589 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=72.9 pTM=0.464 ipTM=0.167 tol=1.29 2024-07-13 23:17:26,775 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=73 pTM=0.464 ipTM=0.166 tol=2.89 2024-07-13 23:18:05,975 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=72.9 pTM=0.464 ipTM=0.166 tol=2.74 2024-07-13 23:18:45,175 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=72.8 pTM=0.464 ipTM=0.168 tol=1.8 2024-07-13 23:19:24,338 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=73.3 pTM=0.462 ipTM=0.164 tol=3.28 2024-07-13 23:20:03,497 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=72.7 pTM=0.465 ipTM=0.167 tol=3.06 2024-07-13 23:20:42,664 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=72.4 pTM=0.461 ipTM=0.163 tol=3.79 2024-07-13 23:21:21,823 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=73.2 pTM=0.463 ipTM=0.165 tol=2.91 2024-07-13 23:22:00,964 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=72.6 pTM=0.462 ipTM=0.165 tol=2.53 2024-07-13 23:22:40,134 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=72.8 pTM=0.463 ipTM=0.164 tol=3.13 2024-07-13 23:23:19,318 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=72.9 pTM=0.465 ipTM=0.165 tol=3.1 2024-07-13 23:23:58,510 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=72.9 pTM=0.466 ipTM=0.165 tol=2.43 2024-07-13 23:24:37,671 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=72.9 pTM=0.466 ipTM=0.166 tol=3.03 2024-07-13 23:25:16,832 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=72.5 pTM=0.467 ipTM=0.167 tol=1.77 2024-07-13 23:25:56,025 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=72.3 pTM=0.465 ipTM=0.165 tol=3.64 2024-07-13 23:26:35,199 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=72.9 pTM=0.466 ipTM=0.167 tol=2.62 2024-07-13 23:27:14,388 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=72.4 pTM=0.469 ipTM=0.169 tol=1.6 2024-07-13 23:27:53,618 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=72.5 pTM=0.465 ipTM=0.166 tol=2.92 2024-07-13 23:28:32,840 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=73.2 pTM=0.466 ipTM=0.167 tol=2.53 2024-07-13 23:28:32,842 alphafold2_multimer_v3_model_5_seed_000 took 1213.7s (30 recycles) 2024-07-13 23:28:33,767 reranking models by 'multimer' metric 2024-07-13 23:28:35,140 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-13 23:31:11,921 Relaxation took 158.2s 2024-07-13 23:31:11,921 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=71.9 pTM=0.485 ipTM=0.192 2024-07-13 23:33:14,750 Relaxation took 122.8s 2024-07-13 23:33:14,750 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=73.9 pTM=0.486 ipTM=0.175 2024-07-13 23:35:45,039 Relaxation took 150.3s 2024-07-13 23:35:45,039 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=73.2 pTM=0.466 ipTM=0.167 2024-07-13 23:38:39,015 Relaxation took 174.0s 2024-07-13 23:38:39,015 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=72.3 pTM=0.465 ipTM=0.167 2024-07-13 23:41:27,645 Relaxation took 168.6s 2024-07-13 23:41:27,646 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=73.1 pTM=0.444 ipTM=0.158 2024-07-13 23:41:39,171 Done