2024-07-13 21:36:52,724 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-13 21:36:53,062 Running on GPU
2024-07-13 21:37:06,371 Found 6 citations for tools or databases
2024-07-13 21:37:06,371 Query 1/1: TYW1_NDUBB (length 885)
2024-07-13 21:37:07,182 Sleeping for 8s. Reason: PENDING
2024-07-13 21:37:15,614 Sleeping for 9s. Reason: RUNNING
2024-07-13 21:37:25,035 Sleeping for 6s. Reason: RUNNING
2024-07-13 21:37:31,463 Sleeping for 8s. Reason: RUNNING
2024-07-13 21:37:39,902 Sleeping for 9s. Reason: RUNNING
2024-07-13 21:37:49,313 Sleeping for 5s. Reason: RUNNING
2024-07-13 21:37:54,732 Sleeping for 7s. Reason: RUNNING
2024-07-13 21:38:02,146 Sleeping for 5s. Reason: RUNNING
2024-07-13 21:38:07,569 Sleeping for 9s. Reason: RUNNING
2024-07-13 21:38:17,007 Sleeping for 5s. Reason: RUNNING
2024-07-13 21:38:22,425 Sleeping for 6s. Reason: RUNNING
2024-07-13 21:38:28,837 Sleeping for 8s. Reason: RUNNING
2024-07-13 21:38:37,260 Sleeping for 9s. Reason: RUNNING
2024-07-13 21:38:46,693 Sleeping for 6s. Reason: RUNNING
2024-07-13 21:38:53,111 Sleeping for 9s. Reason: RUNNING
2024-07-13 21:39:02,540 Sleeping for 6s. Reason: RUNNING
2024-07-13 21:39:08,968 Sleeping for 5s. Reason: RUNNING
2024-07-13 21:39:16,138 Sleeping for 6s. Reason: PENDING
2024-07-13 21:39:22,574 Sleeping for 9s. Reason: RUNNING
2024-07-13 21:39:32,020 Sleeping for 5s. Reason: RUNNING
2024-07-13 21:39:37,451 Sleeping for 8s. Reason: RUNNING
2024-07-13 21:39:45,865 Sleeping for 10s. Reason: RUNNING
2024-07-13 21:39:56,294 Sleeping for 8s. Reason: RUNNING
2024-07-13 21:40:04,711 Sleeping for 8s. Reason: RUNNING
2024-07-13 21:40:13,157 Sleeping for 10s. Reason: RUNNING
2024-07-13 21:40:26,932 Setting max_seq=508, max_extra_seq=2048
2024-07-13 21:44:20,983 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=64.4 pTM=0.531 ipTM=0.159
2024-07-13 21:44:38,516 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66.3 pTM=0.492 ipTM=0.157 tol=10.3
2024-07-13 21:44:56,081 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=65.6 pTM=0.48 ipTM=0.151 tol=12.6
2024-07-13 21:45:13,638 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=64.9 pTM=0.487 ipTM=0.159 tol=13.5
2024-07-13 21:45:31,241 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=65.1 pTM=0.5 ipTM=0.172 tol=6.86
2024-07-13 21:45:48,855 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=64.6 pTM=0.494 ipTM=0.167 tol=3.35
2024-07-13 21:46:06,475 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=64.8 pTM=0.492 ipTM=0.172 tol=3.01
2024-07-13 21:46:24,127 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64.9 pTM=0.491 ipTM=0.168 tol=1.25
2024-07-13 21:46:41,772 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=65 pTM=0.49 ipTM=0.171 tol=1.05
2024-07-13 21:46:59,410 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.7 pTM=0.488 ipTM=0.17 tol=1.23
2024-07-13 21:47:17,067 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64.6 pTM=0.486 ipTM=0.171 tol=1.17
2024-07-13 21:47:34,736 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=64.7 pTM=0.487 ipTM=0.168 tol=1.04
2024-07-13 21:47:52,405 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.6 pTM=0.49 ipTM=0.17 tol=1.2
2024-07-13 21:48:10,084 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64.9 pTM=0.494 ipTM=0.171 tol=2.44
2024-07-13 21:48:27,749 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=64.7 pTM=0.485 ipTM=0.171 tol=2.62
2024-07-13 21:48:45,429 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=64.6 pTM=0.482 ipTM=0.172 tol=2.23
2024-07-13 21:49:03,092 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.6 pTM=0.485 ipTM=0.174 tol=1.12
2024-07-13 21:49:20,782 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.8 pTM=0.482 ipTM=0.172 tol=1.62
2024-07-13 21:49:38,454 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.6 pTM=0.487 ipTM=0.173 tol=1.77
2024-07-13 21:49:56,138 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=64.6 pTM=0.485 ipTM=0.169 tol=1.25
2024-07-13 21:50:13,822 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=64.6 pTM=0.483 ipTM=0.167 tol=1.15
2024-07-13 21:50:31,516 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64.6 pTM=0.485 ipTM=0.169 tol=1.98
2024-07-13 21:50:49,203 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.7 pTM=0.483 ipTM=0.167 tol=3.97
2024-07-13 21:51:06,889 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=64.6 pTM=0.482 ipTM=0.167 tol=2.17
2024-07-13 21:51:24,574 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=64.8 pTM=0.482 ipTM=0.165 tol=1.75
2024-07-13 21:51:42,251 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.6 pTM=0.485 ipTM=0.168 tol=1.32
2024-07-13 21:51:59,923 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=64.7 pTM=0.483 ipTM=0.167 tol=1.84
2024-07-13 21:52:17,622 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=64.9 pTM=0.483 ipTM=0.165 tol=3.03
2024-07-13 21:52:35,308 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=64.7 pTM=0.481 ipTM=0.163 tol=1.77
2024-07-13 21:52:52,990 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=64.6 pTM=0.483 ipTM=0.167 tol=1.33
2024-07-13 21:53:10,677 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=64.6 pTM=0.481 ipTM=0.166 tol=1.83
2024-07-13 21:53:10,678 alphafold2_multimer_v3_model_1_seed_000 took 707.7s (30 recycles)
2024-07-13 21:53:28,918 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=64.9 pTM=0.478 ipTM=0.146
2024-07-13 21:53:46,749 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=67.9 pTM=0.5 ipTM=0.172 tol=14.3
2024-07-13 21:54:04,512 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.8 pTM=0.488 ipTM=0.213 tol=6.77
2024-07-13 21:54:22,275 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=66.2 pTM=0.485 ipTM=0.215 tol=6.07
2024-07-13 21:54:40,038 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=66.1 pTM=0.485 ipTM=0.205 tol=3.76
2024-07-13 21:54:57,800 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=66.1 pTM=0.484 ipTM=0.207 tol=3.86
2024-07-13 21:55:15,544 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=66 pTM=0.481 ipTM=0.207 tol=2.86
2024-07-13 21:55:33,292 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=66.2 pTM=0.483 ipTM=0.196 tol=2.66
2024-07-13 21:55:51,017 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=66.1 pTM=0.482 ipTM=0.192 tol=2.51
2024-07-13 21:56:08,741 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=66.2 pTM=0.484 ipTM=0.192 tol=2.44
2024-07-13 21:56:26,469 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=66.1 pTM=0.48 ipTM=0.191 tol=2.75
2024-07-13 21:56:44,172 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=66 pTM=0.484 ipTM=0.203 tol=2.94
2024-07-13 21:57:01,887 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=66 pTM=0.482 ipTM=0.199 tol=3.31
2024-07-13 21:57:19,599 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=65.9 pTM=0.482 ipTM=0.202 tol=2.71
2024-07-13 21:57:37,318 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=66.2 pTM=0.485 ipTM=0.205 tol=1.81
2024-07-13 21:57:55,024 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=65.9 pTM=0.482 ipTM=0.205 tol=1.17
2024-07-13 21:58:12,756 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=65.9 pTM=0.483 ipTM=0.201 tol=2.1
2024-07-13 21:58:30,477 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=66 pTM=0.483 ipTM=0.203 tol=2.3
2024-07-13 21:58:48,188 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=65.9 pTM=0.481 ipTM=0.194 tol=2.5
2024-07-13 21:59:05,906 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=65.8 pTM=0.481 ipTM=0.197 tol=2.24
2024-07-13 21:59:23,611 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=65.8 pTM=0.481 ipTM=0.2 tol=1.44
2024-07-13 21:59:41,316 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=65.8 pTM=0.482 ipTM=0.202 tol=1.44
2024-07-13 21:59:59,024 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=65.9 pTM=0.483 ipTM=0.188 tol=1.97
2024-07-13 22:00:16,729 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=65.8 pTM=0.482 ipTM=0.193 tol=1.72
2024-07-13 22:00:34,432 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=65.7 pTM=0.482 ipTM=0.195 tol=1.89
2024-07-13 22:00:52,136 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=65.9 pTM=0.485 ipTM=0.19 tol=2.17
2024-07-13 22:01:09,847 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=65.8 pTM=0.483 ipTM=0.191 tol=1.33
2024-07-13 22:01:27,544 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=65.8 pTM=0.482 ipTM=0.203 tol=1.45
2024-07-13 22:01:45,249 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65.9 pTM=0.487 ipTM=0.2 tol=1.72
2024-07-13 22:02:02,935 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65.9 pTM=0.485 ipTM=0.203 tol=1.26
2024-07-13 22:02:20,623 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=65.8 pTM=0.482 ipTM=0.2 tol=1.5
2024-07-13 22:02:20,624 alphafold2_multimer_v3_model_2_seed_000 took 549.5s (30 recycles)
2024-07-13 22:02:38,862 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=64.3 pTM=0.469 ipTM=0.146
2024-07-13 22:02:56,590 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.4 pTM=0.491 ipTM=0.141 tol=17.1
2024-07-13 22:03:14,305 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66.7 pTM=0.49 ipTM=0.15 tol=16.2
2024-07-13 22:03:32,011 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66.4 pTM=0.486 ipTM=0.159 tol=5.39
2024-07-13 22:03:49,706 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66.4 pTM=0.486 ipTM=0.162 tol=4.99
2024-07-13 22:04:07,403 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=66.1 pTM=0.491 ipTM=0.18 tol=2.16
2024-07-13 22:04:25,078 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=65.9 pTM=0.487 ipTM=0.182 tol=1.95
2024-07-13 22:04:42,781 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=65.8 pTM=0.489 ipTM=0.175 tol=2.28
2024-07-13 22:05:00,462 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=65.7 pTM=0.483 ipTM=0.175 tol=2.45
2024-07-13 22:05:18,142 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=65.8 pTM=0.486 ipTM=0.168 tol=2.89
2024-07-13 22:05:35,820 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=65.9 pTM=0.485 ipTM=0.164 tol=2.31
2024-07-13 22:05:53,483 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=65.7 pTM=0.496 ipTM=0.168 tol=1.96
2024-07-13 22:06:11,153 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=65.6 pTM=0.49 ipTM=0.169 tol=2.65
2024-07-13 22:06:28,825 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=65.4 pTM=0.485 ipTM=0.172 tol=2.16
2024-07-13 22:06:46,512 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=65.6 pTM=0.481 ipTM=0.175 tol=2.53
2024-07-13 22:07:04,186 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=65.3 pTM=0.485 ipTM=0.162 tol=2.14
2024-07-13 22:07:21,876 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=65.6 pTM=0.484 ipTM=0.172 tol=1.88
2024-07-13 22:07:39,551 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=65.5 pTM=0.488 ipTM=0.175 tol=2.03
2024-07-13 22:07:57,226 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=65.6 pTM=0.485 ipTM=0.169 tol=2.12
2024-07-13 22:08:14,892 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=65.4 pTM=0.485 ipTM=0.172 tol=2.08
2024-07-13 22:08:32,562 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=65.8 pTM=0.486 ipTM=0.166 tol=1.81
2024-07-13 22:08:50,239 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=65.4 pTM=0.482 ipTM=0.163 tol=3.17
2024-07-13 22:09:07,916 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=65.7 pTM=0.493 ipTM=0.158 tol=4.77
2024-07-13 22:09:25,593 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=65.8 pTM=0.481 ipTM=0.158 tol=2.01
2024-07-13 22:09:43,265 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=65.6 pTM=0.48 ipTM=0.164 tol=1.39
2024-07-13 22:10:00,951 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=65.6 pTM=0.482 ipTM=0.157 tol=1.34
2024-07-13 22:10:18,624 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=65.6 pTM=0.485 ipTM=0.158 tol=2.2
2024-07-13 22:10:36,306 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=65.8 pTM=0.483 ipTM=0.162 tol=3.84
2024-07-13 22:10:54,035 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=66 pTM=0.475 ipTM=0.162 tol=11.2
2024-07-13 22:11:11,736 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=66.1 pTM=0.487 ipTM=0.161 tol=7.17
2024-07-13 22:11:29,428 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=65.5 pTM=0.484 ipTM=0.167 tol=14.3
2024-07-13 22:11:29,429 alphafold2_multimer_v3_model_3_seed_000 took 548.3s (30 recycles)
2024-07-13 22:11:47,685 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=63.2 pTM=0.48 ipTM=0.149
2024-07-13 22:12:05,423 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=64.6 pTM=0.507 ipTM=0.152 tol=18.8
2024-07-13 22:12:23,164 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.8 pTM=0.54 ipTM=0.148 tol=8.13
2024-07-13 22:12:40,918 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64.7 pTM=0.496 ipTM=0.154 tol=7.11
2024-07-13 22:12:58,663 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64.7 pTM=0.509 ipTM=0.15 tol=4.7
2024-07-13 22:13:16,424 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=64.2 pTM=0.499 ipTM=0.158 tol=5.52
2024-07-13 22:13:34,154 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=63.8 pTM=0.491 ipTM=0.155 tol=2.44
2024-07-13 22:13:51,920 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.2 pTM=0.494 ipTM=0.157 tol=3
2024-07-13 22:14:09,670 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64.2 pTM=0.488 ipTM=0.151 tol=4.17
2024-07-13 22:14:27,419 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=64.2 pTM=0.494 ipTM=0.151 tol=3.91
2024-07-13 22:14:45,154 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=64.1 pTM=0.485 ipTM=0.153 tol=1.54
2024-07-13 22:15:02,905 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=64 pTM=0.487 ipTM=0.152 tol=2.63
2024-07-13 22:15:20,654 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=63.9 pTM=0.489 ipTM=0.149 tol=1.81
2024-07-13 22:15:38,420 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64.2 pTM=0.489 ipTM=0.152 tol=2.94
2024-07-13 22:15:56,171 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64.1 pTM=0.487 ipTM=0.148 tol=2.82
2024-07-13 22:16:13,919 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64 pTM=0.485 ipTM=0.151 tol=2.05
2024-07-13 22:16:31,673 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=64.2 pTM=0.494 ipTM=0.155 tol=1.81
2024-07-13 22:16:49,418 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=64.1 pTM=0.489 ipTM=0.156 tol=2.53
2024-07-13 22:17:07,161 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=64.1 pTM=0.49 ipTM=0.153 tol=2.47
2024-07-13 22:17:24,929 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.1 pTM=0.488 ipTM=0.154 tol=2.15
2024-07-13 22:17:42,677 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.1 pTM=0.487 ipTM=0.147 tol=2.42
2024-07-13 22:18:00,442 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=64.2 pTM=0.489 ipTM=0.146 tol=1.65
2024-07-13 22:18:18,191 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=64.1 pTM=0.486 ipTM=0.15 tol=1.47
2024-07-13 22:18:35,946 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=64.2 pTM=0.49 ipTM=0.149 tol=2.02
2024-07-13 22:18:53,708 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=64.1 pTM=0.489 ipTM=0.149 tol=1.95
2024-07-13 22:19:11,486 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=63.8 pTM=0.489 ipTM=0.148 tol=1.66
2024-07-13 22:19:29,255 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64.1 pTM=0.489 ipTM=0.148 tol=1.73
2024-07-13 22:19:47,028 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64.2 pTM=0.488 ipTM=0.149 tol=2.18
2024-07-13 22:20:04,797 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=64 pTM=0.487 ipTM=0.155 tol=2.89
2024-07-13 22:20:22,571 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=64 pTM=0.489 ipTM=0.15 tol=2.93
2024-07-13 22:20:40,364 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=64.1 pTM=0.486 ipTM=0.148 tol=1.18
2024-07-13 22:20:40,365 alphafold2_multimer_v3_model_4_seed_000 took 550.4s (30 recycles)
2024-07-13 22:20:58,677 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=62.6 pTM=0.476 ipTM=0.136
2024-07-13 22:21:16,508 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=65.4 pTM=0.486 ipTM=0.154 tol=8.94
2024-07-13 22:21:34,340 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65.9 pTM=0.485 ipTM=0.143 tol=6.14
2024-07-13 22:21:52,130 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=65.9 pTM=0.487 ipTM=0.151 tol=6.94
2024-07-13 22:22:09,915 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65.6 pTM=0.482 ipTM=0.159 tol=4
2024-07-13 22:22:27,694 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.1 pTM=0.49 ipTM=0.154 tol=4.61
2024-07-13 22:22:45,457 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=65.1 pTM=0.488 ipTM=0.152 tol=5.28
2024-07-13 22:23:03,237 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=64.9 pTM=0.488 ipTM=0.149 tol=2.1
2024-07-13 22:23:21,011 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=64.9 pTM=0.49 ipTM=0.147 tol=1.66
2024-07-13 22:23:38,784 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=65.1 pTM=0.488 ipTM=0.142 tol=1.41
2024-07-13 22:23:56,566 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=65.1 pTM=0.487 ipTM=0.14 tol=1.39
2024-07-13 22:24:14,327 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=65.1 pTM=0.49 ipTM=0.147 tol=1.66
2024-07-13 22:24:32,094 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=64.9 pTM=0.488 ipTM=0.148 tol=2.37
2024-07-13 22:24:49,879 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=65.1 pTM=0.486 ipTM=0.148 tol=1.52
2024-07-13 22:25:07,659 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=65 pTM=0.484 ipTM=0.149 tol=1.59
2024-07-13 22:25:25,450 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=65.1 pTM=0.483 ipTM=0.148 tol=1.41
2024-07-13 22:25:43,239 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=65 pTM=0.484 ipTM=0.148 tol=1.51
2024-07-13 22:26:01,034 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=65.1 pTM=0.481 ipTM=0.147 tol=1.38
2024-07-13 22:26:18,814 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=64.9 pTM=0.485 ipTM=0.147 tol=3.23
2024-07-13 22:26:36,610 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=65.1 pTM=0.48 ipTM=0.149 tol=4.4
2024-07-13 22:26:54,394 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=65 pTM=0.485 ipTM=0.142 tol=4.2
2024-07-13 22:27:12,180 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=65.1 pTM=0.488 ipTM=0.143 tol=3.55
2024-07-13 22:27:29,969 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=64.9 pTM=0.482 ipTM=0.139 tol=3.79
2024-07-13 22:27:47,764 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=65.1 pTM=0.485 ipTM=0.139 tol=1.64
2024-07-13 22:28:05,548 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=64.9 pTM=0.484 ipTM=0.145 tol=2.02
2024-07-13 22:28:23,323 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=64.9 pTM=0.488 ipTM=0.143 tol=2.09
2024-07-13 22:28:41,099 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=65.1 pTM=0.481 ipTM=0.147 tol=1.75
2024-07-13 22:28:58,877 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=64.9 pTM=0.483 ipTM=0.153 tol=2.91
2024-07-13 22:29:16,669 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=64.6 pTM=0.484 ipTM=0.151 tol=1.86
2024-07-13 22:29:34,457 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=65 pTM=0.485 ipTM=0.145 tol=1.87
2024-07-13 22:29:52,254 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=64.9 pTM=0.484 ipTM=0.142 tol=1.08
2024-07-13 22:29:52,255 alphafold2_multimer_v3_model_5_seed_000 took 551.4s (30 recycles)
2024-07-13 22:29:52,741 reranking models by 'multimer' metric
2024-07-13 22:30:16,326 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-13 22:32:01,333 Relaxation took 128.6s
2024-07-13 22:32:01,334 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=65.8 pTM=0.482 ipTM=0.2
2024-07-13 22:33:03,676 Relaxation took 62.3s
2024-07-13 22:33:03,676 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=65.5 pTM=0.484 ipTM=0.167
2024-07-13 22:34:13,411 Relaxation took 69.7s
2024-07-13 22:34:13,412 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=64.6 pTM=0.481 ipTM=0.166
2024-07-13 22:35:35,043 Relaxation took 81.6s
2024-07-13 22:35:35,043 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=64.1 pTM=0.486 ipTM=0.148
2024-07-13 22:36:59,688 Relaxation took 84.6s
2024-07-13 22:36:59,688 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=64.9 pTM=0.484 ipTM=0.142
2024-07-13 22:37:02,200 Done