2024-07-13 21:39:50,406 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-13 21:39:58,043 Running on GPU 2024-07-13 21:40:18,664 Found 6 citations for tools or databases 2024-07-13 21:40:18,664 Query 1/1: TYW4_AT2B2 (length 1929) 2024-07-13 21:40:19,141 Sleeping for 10s. Reason: PENDING 2024-07-13 21:40:29,608 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:40:40,038 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:40:47,493 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:40:54,920 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:41:02,339 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:41:09,775 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:41:16,220 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:41:21,668 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:41:27,085 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:41:36,516 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:41:43,956 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:41:50,375 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:41:55,799 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:42:02,229 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:42:12,654 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:42:22,076 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:42:29,508 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:42:39,965 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:42:50,412 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:42:57,843 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:43:03,283 Sleeping for 8s. Reason: RUNNING 2024-07-13 21:43:11,705 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:43:22,145 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:43:32,571 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:43:37,997 Sleeping for 8s. Reason: RUNNING 2024-07-13 21:43:46,415 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:43:52,835 Sleeping for 8s. Reason: RUNNING 2024-07-13 21:44:01,263 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:44:08,711 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:44:18,182 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:44:23,617 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:44:31,047 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:44:38,481 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:44:44,920 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:44:55,345 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:45:01,777 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:45:12,192 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:45:18,614 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:45:29,050 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:45:35,478 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:45:40,909 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:45:48,337 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:45:54,769 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:46:04,191 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:46:09,624 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:46:15,046 Sleeping for 8s. Reason: RUNNING 2024-07-13 21:46:23,475 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:46:30,884 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:46:37,296 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:46:44,716 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:46:55,194 Sleeping for 8s. Reason: RUNNING 2024-07-13 21:47:03,627 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:47:14,050 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:47:21,472 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:47:30,906 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:47:37,351 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:47:46,772 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:47:53,202 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:48:02,650 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:48:13,080 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:48:19,499 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:48:26,915 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:48:33,356 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:48:43,778 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:48:49,202 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:48:58,626 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:49:08,049 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:49:17,477 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:49:24,923 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:49:30,375 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:49:46,125 Sleeping for 6s. Reason: PENDING 2024-07-13 21:49:52,568 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:49:59,996 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:50:05,423 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:50:10,829 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:50:20,245 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:50:26,686 Sleeping for 8s. Reason: RUNNING 2024-07-13 21:50:35,109 Sleeping for 8s. Reason: RUNNING 2024-07-13 21:50:43,532 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:50:50,952 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:50:56,381 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:51:01,800 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:51:08,254 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:51:13,688 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:51:23,104 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:51:28,559 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:51:33,989 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:51:41,423 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:51:51,855 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:51:59,295 Sleeping for 8s. Reason: RUNNING 2024-07-13 21:52:07,725 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:52:13,140 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:52:23,575 Sleeping for 8s. Reason: RUNNING 2024-07-13 21:52:32,011 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:52:42,443 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:52:48,861 Sleeping for 8s. Reason: RUNNING 2024-07-13 21:52:57,289 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:53:04,713 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:53:11,141 Sleeping for 8s. Reason: RUNNING 2024-07-13 21:53:19,570 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:53:26,024 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:53:31,465 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:53:36,876 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:53:46,331 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:53:51,753 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:54:02,194 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:54:07,621 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:54:15,056 Sleeping for 7s. Reason: RUNNING 2024-07-13 21:54:22,475 Sleeping for 6s. Reason: RUNNING 2024-07-13 21:54:28,906 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:54:38,343 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:54:43,748 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:54:53,164 Sleeping for 8s. Reason: RUNNING 2024-07-13 21:55:01,683 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:55:11,112 Sleeping for 10s. Reason: RUNNING 2024-07-13 21:55:21,542 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:55:26,967 Sleeping for 5s. Reason: RUNNING 2024-07-13 21:55:32,397 Sleeping for 9s. Reason: RUNNING 2024-07-13 21:55:55,147 Setting max_seq=508, max_extra_seq=2048 2024-07-13 22:03:00,157 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=73.7 pTM=0.481 ipTM=0.205 2024-07-13 22:04:57,607 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=74.2 pTM=0.481 ipTM=0.202 tol=6.38 2024-07-13 22:06:54,914 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=74.6 pTM=0.49 ipTM=0.489 tol=3.91 2024-07-13 22:08:52,160 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=75.1 pTM=0.492 ipTM=0.683 tol=3.07 2024-07-13 22:10:49,335 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=75.3 pTM=0.495 ipTM=0.659 tol=2.74 2024-07-13 22:12:46,537 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=75.3 pTM=0.491 ipTM=0.655 tol=3.17 2024-07-13 22:14:43,727 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=75.5 pTM=0.495 ipTM=0.645 tol=2.82 2024-07-13 22:16:40,935 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=75.4 pTM=0.491 ipTM=0.665 tol=1.59 2024-07-13 22:18:38,087 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=75.4 pTM=0.495 ipTM=0.672 tol=1.26 2024-07-13 22:20:35,203 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=75.4 pTM=0.496 ipTM=0.653 tol=1.18 2024-07-13 22:22:32,269 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=75.4 pTM=0.496 ipTM=0.684 tol=1.27 2024-07-13 22:24:29,320 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=75.3 pTM=0.495 ipTM=0.706 tol=1.7 2024-07-13 22:26:26,348 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=75.3 pTM=0.495 ipTM=0.705 tol=1.41 2024-07-13 22:28:23,355 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=75.4 pTM=0.494 ipTM=0.719 tol=1.2 2024-07-13 22:30:20,341 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=75.4 pTM=0.495 ipTM=0.74 tol=1.29 2024-07-13 22:32:17,306 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=75.2 pTM=0.491 ipTM=0.747 tol=1.17 2024-07-13 22:34:14,265 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=75.4 pTM=0.495 ipTM=0.749 tol=1.17 2024-07-13 22:36:11,246 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=75.3 pTM=0.494 ipTM=0.749 tol=0.76 2024-07-13 22:38:08,242 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=75.2 pTM=0.488 ipTM=0.75 tol=1.27 2024-07-13 22:40:05,232 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=75.2 pTM=0.489 ipTM=0.761 tol=1.2 2024-07-13 22:42:02,262 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=75.3 pTM=0.491 ipTM=0.764 tol=0.99 2024-07-13 22:43:59,324 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=75.3 pTM=0.493 ipTM=0.761 tol=1.1 2024-07-13 22:45:56,384 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=75.2 pTM=0.49 ipTM=0.755 tol=1.23 2024-07-13 22:47:53,463 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=75.2 pTM=0.49 ipTM=0.764 tol=1.17 2024-07-13 22:49:50,517 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=75.2 pTM=0.491 ipTM=0.773 tol=1.19 2024-07-13 22:51:47,561 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=75.3 pTM=0.49 ipTM=0.768 tol=1.4 2024-07-13 22:53:44,574 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=75.1 pTM=0.492 ipTM=0.763 tol=1.82 2024-07-13 22:55:41,612 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=75.2 pTM=0.491 ipTM=0.766 tol=1.66 2024-07-13 22:57:38,633 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=75.2 pTM=0.49 ipTM=0.762 tol=1.27 2024-07-13 22:59:35,688 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=75.2 pTM=0.49 ipTM=0.771 tol=1.46 2024-07-13 23:01:32,702 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=75.2 pTM=0.494 ipTM=0.768 tol=1.41 2024-07-13 23:01:32,705 alphafold2_multimer_v3_model_1_seed_000 took 3882.0s (30 recycles) 2024-07-13 23:03:32,917 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=72.7 pTM=0.494 ipTM=0.229 2024-07-13 23:05:30,194 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=73.3 pTM=0.493 ipTM=0.197 tol=5.24 2024-07-13 23:07:27,448 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=73.8 pTM=0.491 ipTM=0.195 tol=5.04 2024-07-13 23:09:24,728 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=73.9 pTM=0.488 ipTM=0.194 tol=5.03 2024-07-13 23:11:21,963 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=73.9 pTM=0.489 ipTM=0.197 tol=3.69 2024-07-13 23:13:19,193 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=73.9 pTM=0.489 ipTM=0.197 tol=2.27 2024-07-13 23:15:16,436 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=74.1 pTM=0.492 ipTM=0.196 tol=2.42 2024-07-13 23:17:13,681 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=74 pTM=0.488 ipTM=0.196 tol=3.27 2024-07-13 23:19:10,933 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=74.2 pTM=0.492 ipTM=0.197 tol=3.8 2024-07-13 23:21:08,147 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=74.1 pTM=0.493 ipTM=0.198 tol=2.48 2024-07-13 23:23:05,355 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=73.9 pTM=0.49 ipTM=0.199 tol=2.12 2024-07-13 23:25:02,564 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=74 pTM=0.492 ipTM=0.205 tol=1.58 2024-07-13 23:26:59,733 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=74.2 pTM=0.493 ipTM=0.206 tol=0.742 2024-07-13 23:28:56,911 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=74.2 pTM=0.493 ipTM=0.203 tol=0.955 2024-07-13 23:30:54,090 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=74.1 pTM=0.493 ipTM=0.207 tol=0.855 2024-07-13 23:32:51,284 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=74.1 pTM=0.49 ipTM=0.211 tol=0.605 2024-07-13 23:34:48,438 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=74.3 pTM=0.494 ipTM=0.218 tol=0.675 2024-07-13 23:36:45,596 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=74.4 pTM=0.494 ipTM=0.227 tol=0.879 2024-07-13 23:38:42,773 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=74.3 pTM=0.492 ipTM=0.229 tol=0.607 2024-07-13 23:40:39,912 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=73.9 pTM=0.491 ipTM=0.227 tol=1.13 2024-07-13 23:42:37,092 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=74.3 pTM=0.494 ipTM=0.22 tol=0.742 2024-07-13 23:44:34,278 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=74.2 pTM=0.494 ipTM=0.217 tol=0.642 2024-07-13 23:46:31,411 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=74 pTM=0.491 ipTM=0.213 tol=0.504 2024-07-13 23:48:28,570 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=74.1 pTM=0.493 ipTM=0.207 tol=0.411 2024-07-13 23:48:28,573 alphafold2_multimer_v3_model_2_seed_000 took 2812.8s (23 recycles) 2024-07-13 23:50:28,943 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=73.8 pTM=0.489 ipTM=0.25 2024-07-13 23:52:26,020 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=74.3 pTM=0.492 ipTM=0.368 tol=8.45 2024-07-13 23:54:23,105 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=74.3 pTM=0.49 ipTM=0.346 tol=5.73 2024-07-13 23:56:20,207 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=74.4 pTM=0.487 ipTM=0.347 tol=2.48 2024-07-13 23:58:17,267 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=74.3 pTM=0.486 ipTM=0.379 tol=2.48 2024-07-14 00:00:14,297 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=74.4 pTM=0.487 ipTM=0.365 tol=2.38 2024-07-14 00:02:11,310 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=74.4 pTM=0.488 ipTM=0.369 tol=4.36 2024-07-14 00:04:08,432 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=74.5 pTM=0.487 ipTM=0.377 tol=3.9 2024-07-14 00:06:05,585 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=74.5 pTM=0.487 ipTM=0.375 tol=1.95 2024-07-14 00:08:02,756 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=74.5 pTM=0.488 ipTM=0.348 tol=2.21 2024-07-14 00:09:59,895 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=74.4 pTM=0.488 ipTM=0.364 tol=3.39 2024-07-14 00:11:57,020 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=74.4 pTM=0.489 ipTM=0.387 tol=2.68 2024-07-14 00:13:54,100 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=74.4 pTM=0.487 ipTM=0.356 tol=3.01 2024-07-14 00:15:51,176 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=74.5 pTM=0.49 ipTM=0.36 tol=2.38 2024-07-14 00:17:48,208 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=74.4 pTM=0.49 ipTM=0.355 tol=2.29 2024-07-14 00:19:45,269 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=74.5 pTM=0.49 ipTM=0.368 tol=4.28 2024-07-14 00:21:42,264 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=74.4 pTM=0.492 ipTM=0.384 tol=6.67 2024-07-14 00:23:39,267 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=74.6 pTM=0.493 ipTM=0.407 tol=4.29 2024-07-14 00:25:36,293 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=74.5 pTM=0.491 ipTM=0.361 tol=3.81 2024-07-14 00:27:33,281 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=74.6 pTM=0.493 ipTM=0.381 tol=4.55 2024-07-14 00:29:30,249 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=74.5 pTM=0.495 ipTM=0.416 tol=1.23 2024-07-14 00:31:27,293 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=74.6 pTM=0.495 ipTM=0.375 tol=0.863 2024-07-14 00:33:24,318 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=74.4 pTM=0.492 ipTM=0.4 tol=0.851 2024-07-14 00:35:29,059 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=74.6 pTM=0.496 ipTM=0.404 tol=0.812 2024-07-14 00:37:26,188 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=74.5 pTM=0.492 ipTM=0.387 tol=0.833 2024-07-14 00:39:23,282 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=74.7 pTM=0.495 ipTM=0.399 tol=0.781 2024-07-14 00:41:20,394 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=74.6 pTM=0.494 ipTM=0.38 tol=1.28 2024-07-14 00:43:17,455 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=74.4 pTM=0.495 ipTM=0.383 tol=0.979 2024-07-14 00:45:14,485 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=74.6 pTM=0.492 ipTM=0.403 tol=1.17 2024-07-14 00:47:11,509 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=74.6 pTM=0.494 ipTM=0.386 tol=0.906 2024-07-14 00:49:08,504 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=74.6 pTM=0.492 ipTM=0.392 tol=1.25 2024-07-14 00:49:08,506 alphafold2_multimer_v3_model_3_seed_000 took 3636.8s (30 recycles) 2024-07-14 00:51:11,134 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=74.1 pTM=0.517 ipTM=0.245 2024-07-14 00:53:08,371 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=73.8 pTM=0.494 ipTM=0.205 tol=5.8 2024-07-14 00:55:05,638 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=73.9 pTM=0.493 ipTM=0.21 tol=5.8 2024-07-14 00:57:02,919 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=73.9 pTM=0.488 ipTM=0.197 tol=3.49 2024-07-14 00:59:00,248 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=73.9 pTM=0.49 ipTM=0.198 tol=2.9 2024-07-14 01:00:57,551 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=73.8 pTM=0.487 ipTM=0.197 tol=2.03 2024-07-14 01:02:54,798 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=73.7 pTM=0.488 ipTM=0.198 tol=2.04 2024-07-14 01:04:52,068 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=73.8 pTM=0.487 ipTM=0.196 tol=1.81 2024-07-14 01:06:49,312 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=73.9 pTM=0.488 ipTM=0.195 tol=1.14 2024-07-14 01:08:46,519 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=73.9 pTM=0.489 ipTM=0.195 tol=3.41 2024-07-14 01:10:43,771 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=73.8 pTM=0.489 ipTM=0.195 tol=2.94 2024-07-14 01:12:40,992 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=73.9 pTM=0.488 ipTM=0.196 tol=1.5 2024-07-14 01:14:38,224 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=73.9 pTM=0.49 ipTM=0.195 tol=1.76 2024-07-14 01:16:35,462 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=73.8 pTM=0.489 ipTM=0.196 tol=3.23 2024-07-14 01:18:32,708 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=73.9 pTM=0.49 ipTM=0.197 tol=2.04 2024-07-14 01:20:29,977 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=73.8 pTM=0.488 ipTM=0.196 tol=1.65 2024-07-14 01:22:27,222 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=74.1 pTM=0.491 ipTM=0.196 tol=1.43 2024-07-14 01:24:24,481 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=73.9 pTM=0.488 ipTM=0.195 tol=4.29 2024-07-14 01:26:21,750 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=73.9 pTM=0.489 ipTM=0.196 tol=4.36 2024-07-14 01:28:19,023 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=73.9 pTM=0.488 ipTM=0.196 tol=1.85 2024-07-14 01:30:16,308 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=73.9 pTM=0.489 ipTM=0.195 tol=2.28 2024-07-14 01:32:13,513 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=73.9 pTM=0.487 ipTM=0.197 tol=1.94 2024-07-14 01:34:10,773 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=73.9 pTM=0.49 ipTM=0.195 tol=2.36 2024-07-14 01:36:08,025 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=73.9 pTM=0.49 ipTM=0.195 tol=1.92 2024-07-14 01:38:05,281 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=73.8 pTM=0.49 ipTM=0.197 tol=4.16 2024-07-14 01:40:02,528 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=73.9 pTM=0.489 ipTM=0.197 tol=4.55 2024-07-14 01:41:59,766 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=73.9 pTM=0.49 ipTM=0.196 tol=2.5 2024-07-14 01:43:57,018 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=73.8 pTM=0.487 ipTM=0.197 tol=1.66 2024-07-14 01:45:54,276 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=73.9 pTM=0.488 ipTM=0.197 tol=1.7 2024-07-14 01:47:51,537 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=73.9 pTM=0.489 ipTM=0.198 tol=2.07 2024-07-14 01:49:48,780 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=74.1 pTM=0.492 ipTM=0.197 tol=2.07 2024-07-14 01:49:48,783 alphafold2_multimer_v3_model_4_seed_000 took 3634.8s (30 recycles) 2024-07-14 01:51:49,258 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=72.1 pTM=0.478 ipTM=0.217 2024-07-14 01:53:46,599 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=73.2 pTM=0.481 ipTM=0.408 tol=6.59 2024-07-14 01:55:43,837 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=73.4 pTM=0.482 ipTM=0.518 tol=4.64 2024-07-14 01:57:41,028 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=73.9 pTM=0.484 ipTM=0.53 tol=4.72 2024-07-14 01:59:38,158 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=73.9 pTM=0.488 ipTM=0.522 tol=3.04 2024-07-14 02:01:35,228 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=74.1 pTM=0.49 ipTM=0.542 tol=2.41 2024-07-14 02:03:32,243 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=74.2 pTM=0.494 ipTM=0.562 tol=3.68 2024-07-14 02:05:29,240 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=74.2 pTM=0.492 ipTM=0.57 tol=1.88 2024-07-14 02:07:26,210 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=74.3 pTM=0.494 ipTM=0.555 tol=2.22 2024-07-14 02:09:23,208 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=74.2 pTM=0.495 ipTM=0.531 tol=2.4 2024-07-14 02:11:20,200 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=74.3 pTM=0.497 ipTM=0.563 tol=2.76 2024-07-14 02:13:17,176 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=74.3 pTM=0.496 ipTM=0.562 tol=3.11 2024-07-14 02:15:14,149 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=74.2 pTM=0.497 ipTM=0.567 tol=3.12 2024-07-14 02:17:11,114 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=74.4 pTM=0.497 ipTM=0.566 tol=3.61 2024-07-14 02:19:08,069 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=74.3 pTM=0.499 ipTM=0.57 tol=2.55 2024-07-14 02:21:05,027 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=74.3 pTM=0.498 ipTM=0.576 tol=2.99 2024-07-14 02:23:01,971 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=74.4 pTM=0.5 ipTM=0.574 tol=2.22 2024-07-14 02:24:58,927 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=74.4 pTM=0.501 ipTM=0.577 tol=1.89 2024-07-14 02:26:55,913 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=74.2 pTM=0.497 ipTM=0.556 tol=3.23 2024-07-14 02:28:52,875 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=74.2 pTM=0.497 ipTM=0.56 tol=3.16 2024-07-14 02:30:49,816 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=74.2 pTM=0.5 ipTM=0.588 tol=2.62 2024-07-14 02:32:46,763 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=74.4 pTM=0.499 ipTM=0.562 tol=2.64 2024-07-14 02:34:43,659 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=74.2 pTM=0.498 ipTM=0.541 tol=2.32 2024-07-14 02:36:40,570 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=74.2 pTM=0.497 ipTM=0.541 tol=3.29 2024-07-14 02:38:37,472 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=74.2 pTM=0.498 ipTM=0.561 tol=3.2 2024-07-14 02:40:34,389 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=74.2 pTM=0.498 ipTM=0.549 tol=3.38 2024-07-14 02:42:31,331 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=74.2 pTM=0.499 ipTM=0.544 tol=4.44 2024-07-14 02:44:28,303 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=74.2 pTM=0.498 ipTM=0.531 tol=1.58 2024-07-14 02:46:25,247 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=74.1 pTM=0.495 ipTM=0.541 tol=2.99 2024-07-14 02:48:22,168 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=74.4 pTM=0.497 ipTM=0.543 tol=3.17 2024-07-14 02:50:19,094 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=74.2 pTM=0.496 ipTM=0.553 tol=2.7 2024-07-14 02:50:19,096 alphafold2_multimer_v3_model_5_seed_000 took 3627.2s (30 recycles) 2024-07-14 02:50:22,925 reranking models by 'multimer' metric 2024-07-14 02:50:48,563 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-14 02:55:29,876 Relaxation took 307.0s 2024-07-14 02:55:29,877 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=75.2 pTM=0.494 ipTM=0.768 2024-07-14 03:00:34,729 Relaxation took 304.9s 2024-07-14 03:00:34,729 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=74.2 pTM=0.496 ipTM=0.553 2024-07-14 03:07:28,773 Relaxation took 414.0s 2024-07-14 03:07:28,774 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=74.6 pTM=0.492 ipTM=0.392 2024-07-14 03:12:03,245 Relaxation took 274.5s 2024-07-14 03:12:03,245 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=74.1 pTM=0.493 ipTM=0.207 2024-07-14 03:18:00,945 Relaxation took 357.7s 2024-07-14 03:18:00,945 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=74.1 pTM=0.492 ipTM=0.197 2024-07-14 03:18:06,988 Done